Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0104060 | KEH40362.1 | 56.757 | 333 | 112 | 7 | 5 | 308 | 15 | 344 | 2.33e-112 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0104060 | A0A072VF30 | 56.757 | 333 | 112 | 7 | 5 | 308 | 15 | 344 | 1.11e-112 | 350 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009640 | Msa0104060 | 0.836177 | 1.089964e-56 | -8.615850e-47 |
| Msa0104060 | Msa0545050 | 0.803674 | 3.113889e-49 | -8.615850e-47 |
| Msa0104060 | Msa0641130 | 0.813583 | 2.378499e-51 | -8.615850e-47 |
| Msa0104060 | Msa1256060 | 0.842047 | 3.281772e-58 | -8.615850e-47 |
| Msa0104060 | Msa1281690 | 0.808007 | 3.826918e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0104060 | MtrunA17_Chr1g0158411 | 57.100 | 331 | 110 | 7 | 7 | 308 | 17 | 344 | 7.19e-116 | 350 |
| Msa0104060 | MtrunA17_Chr6g0467711 | 49.271 | 343 | 121 | 15 | 3 | 308 | 14 | 340 | 5.08e-87 | 275 |
| Msa0104060 | MtrunA17_Chr1g0157911 | 47.076 | 342 | 133 | 11 | 3 | 308 | 6 | 335 | 3.12e-86 | 273 |
| Msa0104060 | MtrunA17_Chr3g0088331 | 52.688 | 279 | 100 | 7 | 2 | 252 | 5 | 279 | 1.69e-85 | 258 |
| Msa0104060 | MtrunA17_Chr1g0158731 | 51.362 | 257 | 102 | 7 | 1 | 238 | 1 | 253 | 2.37e-80 | 246 |
| Msa0104060 | MtrunA17_Chr1g0158331 | 47.468 | 316 | 110 | 13 | 3 | 269 | 15 | 323 | 1.77e-77 | 239 |
| Msa0104060 | MtrunA17_Chr1g0158461 | 47.297 | 296 | 105 | 8 | 3 | 249 | 15 | 308 | 3.04e-75 | 233 |
| Msa0104060 | MtrunA17_Chr1g0157861 | 41.534 | 378 | 139 | 13 | 2 | 308 | 5 | 371 | 1.60e-66 | 221 |
| Msa0104060 | MtrunA17_Chr1g0157881 | 40.443 | 361 | 127 | 12 | 2 | 277 | 22 | 379 | 3.24e-65 | 218 |
| Msa0104060 | MtrunA17_Chr1g0158151 | 36.111 | 324 | 149 | 12 | 24 | 304 | 16 | 324 | 3.15e-48 | 171 |
| Msa0104060 | MtrunA17_Chr1g0157791 | 43.277 | 238 | 102 | 7 | 25 | 240 | 22 | 248 | 2.04e-47 | 169 |
| Msa0104060 | MtrunA17_Chr1g0158191 | 34.259 | 324 | 151 | 11 | 7 | 280 | 3 | 314 | 3.01e-44 | 160 |
| Msa0104060 | MtrunA17_Chr1g0157961 | 39.738 | 229 | 104 | 8 | 22 | 222 | 19 | 241 | 6.63e-44 | 152 |
| Msa0104060 | MtrunA17_Chr1g0158061 | 38.077 | 260 | 116 | 7 | 36 | 256 | 28 | 281 | 1.28e-43 | 151 |
| Msa0104060 | MtrunA17_Chr1g0157991 | 42.922 | 219 | 90 | 7 | 33 | 222 | 28 | 240 | 2.06e-43 | 158 |
| Msa0104060 | MtrunA17_Chr1g0158041 | 36.577 | 298 | 134 | 11 | 31 | 280 | 24 | 314 | 2.46e-42 | 155 |
| Msa0104060 | MtrunA17_Chr1g0158761 | 36.937 | 222 | 126 | 4 | 9 | 226 | 4 | 215 | 9.50e-42 | 152 |
| Msa0104060 | MtrunA17_Chr1g0158631 | 36.101 | 277 | 121 | 11 | 41 | 274 | 37 | 300 | 5.38e-37 | 139 |
| Msa0104060 | MtrunA17_Chr1g0158661 | 35.211 | 284 | 132 | 13 | 34 | 282 | 28 | 294 | 5.27e-36 | 137 |
| Msa0104060 | MtrunA17_Chr1g0158541 | 31.686 | 344 | 175 | 14 | 3 | 308 | 12 | 333 | 5.65e-36 | 137 |
| Msa0104060 | MtrunA17_Chr1g0158301 | 30.769 | 338 | 166 | 15 | 11 | 308 | 22 | 331 | 4.11e-34 | 131 |
| Msa0104060 | MtrunA17_Chr1g0158121 | 64.773 | 88 | 29 | 1 | 38 | 123 | 34 | 121 | 7.26e-33 | 118 |
| Msa0104060 | MtrunA17_Chr1g0158501 | 50.943 | 106 | 45 | 3 | 3 | 104 | 15 | 117 | 1.94e-25 | 102 |
| Msa0104060 | MtrunA17_Chr1g0158501 | 35.152 | 165 | 64 | 7 | 145 | 267 | 77 | 240 | 2.35e-14 | 71.6 |
| Msa0104060 | MtrunA17_Chr1g0157931 | 30.392 | 204 | 92 | 8 | 145 | 308 | 16 | 209 | 2.84e-15 | 76.3 |
| Msa0104060 | MtrunA17_Chr1g0160661 | 27.915 | 283 | 151 | 12 | 10 | 267 | 33 | 287 | 1.49e-14 | 73.9 |
| Msa0104060 | MtrunA17_Chr1g0160761 | 45.882 | 85 | 41 | 2 | 43 | 123 | 33 | 116 | 3.59e-14 | 72.8 |
| Msa0104060 | MtrunA17_Chr1g0160701 | 30.093 | 216 | 116 | 9 | 32 | 222 | 38 | 243 | 2.30e-13 | 70.5 |
| Msa0104060 | MtrunA17_Chr1g0160711 | 42.697 | 89 | 43 | 2 | 43 | 124 | 30 | 117 | 3.07e-13 | 70.1 |
| Msa0104060 | MtrunA17_Chr1g0160561 | 43.333 | 90 | 42 | 3 | 43 | 125 | 37 | 124 | 1.01e-12 | 68.6 |
| Msa0104060 | MtrunA17_Chr1g0160721 | 27.350 | 234 | 130 | 9 | 10 | 222 | 15 | 229 | 4.19e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 68 sgRNAs with CRISPR-Local
Find 637 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGGTGGACAATAATTT+TGG | 0.194753 | 1_3:+11623101 | None:intergenic |
| CTACAGAACTGCCAATTTAA+TGG | 0.200189 | 1_3:-11622464 | Msa0104060:intron |
| CACAGGACTACTACAAATAA+TGG | 0.259593 | 1_3:-11614894 | Msa0104060:intron |
| ATTGTAAGAACTTGTGAAAT+TGG | 0.269655 | 1_3:+11622844 | None:intergenic |
| CTCCGATCTGTCCATTAAAT+TGG | 0.299548 | 1_3:+11622453 | None:intergenic |
| GAATTAACCCGCGGAACCTT+TGG | 0.320942 | 1_3:-11614854 | Msa0104060:CDS |
| TCTAAATTTAGCATCGAGTT+TGG | 0.324458 | 1_3:-11614809 | Msa0104060:CDS |
| CAACAGCAGCTATAACAATT+TGG | 0.342416 | 1_3:+11623179 | None:intergenic |
| AAAGGTTCCGCGGGTTAATT+CGG | 0.349127 | 1_3:+11614856 | None:intergenic |
| ATCGCCGGCGACATCAAAAC+TGG | 0.349487 | 1_3:-11622668 | Msa0104060:CDS |
| ACTGTACTCGGCATTGTTAA+AGG | 0.356519 | 1_3:-11616201 | Msa0104060:intron |
| GTCAAAGTTGCGCATATTGA+TGG | 0.367506 | 1_3:-11620804 | Msa0104060:CDS |
| CTAGGATCACCGCAGCTTGC+CGG | 0.374652 | 1_3:+11623028 | None:intergenic |
| GCAGTTACCCTCTTGAATTC+CGG | 0.376157 | 1_3:+11622898 | None:intergenic |
| ACAATTCGATTAGTTGATTC+CGG | 0.410211 | 1_3:-11622917 | Msa0104060:CDS |
| AGTGTGAACTTGATTATTGC+AGG | 0.413516 | 1_3:-11622424 | Msa0104060:CDS |
| ATCGAGTTTGGAAGAATCAT+TGG | 0.424176 | 1_3:-11614797 | Msa0104060:CDS |
| GCAATGGATTTGACCTTACA+TGG | 0.431352 | 1_3:-11622523 | Msa0104060:CDS |
| TGATTATTGCAGGACTCCAT+TGG | 0.441250 | 1_3:-11622414 | Msa0104060:CDS |
| GTCGGTTCTCCGCCATGGGT+GGG | 0.444848 | 1_3:-11622794 | Msa0104060:CDS |
| GATTATTGCAGGACTCCATT+GGG | 0.463901 | 1_3:-11622413 | Msa0104060:CDS |
| TAAGGTCAAATCCATTGCTT+AGG | 0.466927 | 1_3:+11622528 | None:intergenic |
| CGGCAAGCTGCGGTGATCCT+AGG | 0.467125 | 1_3:-11623027 | Msa0104060:CDS |
| TCGCAGGATAACTCGTACCT+AGG | 0.468784 | 1_3:+11623010 | None:intergenic |
| ATGAAGTCGGTTCTCCGCCA+TGG | 0.473815 | 1_3:-11622799 | Msa0104060:CDS |
| AGTCGGTTCTCCGCCATGGG+TGG | 0.491401 | 1_3:-11622795 | Msa0104060:CDS |
| ACAGGACTACTACAAATAAT+GGG | 0.494754 | 1_3:-11614893 | Msa0104060:intron |
| ATACATATCCATGCATCAAA+TGG | 0.500124 | 1_3:-11622715 | Msa0104060:CDS |
| TCGGTTCTCCGCCATGGGTG+GGG | 0.503433 | 1_3:-11622793 | Msa0104060:CDS |
| CTTACAATTATAACTACCAC+GGG | 0.505040 | 1_3:-11622829 | Msa0104060:CDS |
| TTAGAATGCCATTTGATGCA+TGG | 0.511474 | 1_3:+11622707 | None:intergenic |
| TGCATCAAATGGCATTCTAA+AGG | 0.529499 | 1_3:-11622704 | Msa0104060:CDS |
| TATTGTCCACCTTCTTCATG+TGG | 0.541971 | 1_3:-11623094 | Msa0104060:CDS |
| TGCCAATTTAATGGACAGAT+CGG | 0.543487 | 1_3:-11622455 | Msa0104060:CDS |
| GTTTCGACTTAAGAATGATC+CGG | 0.543644 | 1_3:-11623047 | Msa0104060:CDS |
| AAAACTGGGAGCTTAAACGT+TGG | 0.548000 | 1_3:-11622653 | Msa0104060:CDS |
| TAATGGACAGATCGGAGGAC+TGG | 0.554959 | 1_3:-11622447 | Msa0104060:CDS |
| AGGCACGTCTCACCCATGTA+AGG | 0.556251 | 1_3:+11622510 | None:intergenic |
| TGAAGTCGGTTCTCCGCCAT+GGG | 0.556627 | 1_3:-11622798 | Msa0104060:CDS |
| AGTTTGGAAGAATCATTGGC+AGG | 0.560257 | 1_3:-11614793 | None:intergenic |
| GATGTTGTTAAGAAATAGCG+AGG | 0.569345 | 1_3:+11622866 | None:intergenic |
| ATTCATGGAATCCTAAGCAA+TGG | 0.570254 | 1_3:-11622539 | Msa0104060:CDS |
| AGATAATCCAAAGGTTCCGC+GGG | 0.570857 | 1_3:+11614847 | None:intergenic |
| GGATCATTCTTAAGTCGAAA+CGG | 0.577600 | 1_3:+11623049 | None:intergenic |
| TAGATAATCCAAAGGTTCCG+CGG | 0.578617 | 1_3:+11614846 | None:intergenic |
| CGCCGGCGATAGCATAAACA+TGG | 0.581431 | 1_3:+11622681 | None:intergenic |
| GGATATGTATTCACATACAT+AGG | 0.594898 | 1_3:+11622728 | None:intergenic |
| AGTTGATTCCGGAATTCAAG+AGG | 0.595199 | 1_3:-11622906 | Msa0104060:CDS |
| GGCCATGTTTATGCTATCGC+CGG | 0.596726 | 1_3:-11622683 | Msa0104060:CDS |
| AACTTTCTTAGATAATCCAA+AGG | 0.597782 | 1_3:+11614838 | None:intergenic |
| TCTTACAATTATAACTACCA+CGG | 0.601760 | 1_3:-11622830 | Msa0104060:CDS |
| CACGGGGATGCATATGAAGT+CGG | 0.606284 | 1_3:-11622812 | Msa0104060:CDS |
| TGTTAAGAAATAGCGAGGAA+TGG | 0.608673 | 1_3:+11622871 | None:intergenic |
| GATTCCATGAATTTCCGCGT+AGG | 0.614064 | 1_3:+11622550 | None:intergenic |
| CAGCAGCTATAACAATTTGG+AGG | 0.614407 | 1_3:+11623182 | None:intergenic |
| TAAGAAATAGCGAGGAATGG+TGG | 0.614892 | 1_3:+11622874 | None:intergenic |
| GTTGATTCCGGAATTCAAGA+GGG | 0.619973 | 1_3:-11622905 | Msa0104060:CDS |
| TATACTACATGCCCCACCCA+TGG | 0.621409 | 1_3:+11622782 | None:intergenic |
| AAGAATGATCCGGCAAGCTG+CGG | 0.625233 | 1_3:-11623037 | Msa0104060:CDS |
| TTTGTTGCAGATACTGTACT+CGG | 0.626510 | 1_3:-11616213 | Msa0104060:intron |
| AAGTTGCGCATATTGATGGA+AGG | 0.635629 | 1_3:-11620800 | Msa0104060:intron |
| CAATTTAATGGACAGATCGG+AGG | 0.642435 | 1_3:-11622452 | Msa0104060:CDS |
| CAATGGATTTGACCTTACAT+GGG | 0.649383 | 1_3:-11622522 | Msa0104060:intron |
| TCGCCGGCGACATCAAAACT+GGG | 0.676420 | 1_3:-11622667 | Msa0104060:CDS |
| CGACTTCATATGCATCCCCG+TGG | 0.722059 | 1_3:+11622813 | None:intergenic |
| AAAAGTTCCGAATTAACCCG+CGG | 0.756037 | 1_3:-11614863 | Msa0104060:CDS |
| ACTACATGCCCCACCCATGG+CGG | 0.756826 | 1_3:+11622785 | None:intergenic |
| TTACAATTATAACTACCACG+GGG | 0.797921 | 1_3:-11622828 | Msa0104060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAAATAATTTTTTTTT+TGG | + | chr1_3:11617035-11617054 | None:intergenic | 0.0% |
| !!! | TATATTAAATATATATTTTT+TGG | - | chr1_3:11621901-11621920 | Msa0104060:intron | 0.0% |
| !!! | CATTTAATAATTGATTTATT+TGG | - | chr1_3:11616699-11616718 | Msa0104060:intron | 10.0% |
| !! | AATTCTGTTATTATATTAAT+AGG | - | chr1_3:11617057-11617076 | Msa0104060:intron | 10.0% |
| !!! | TATAGTAAAACAAATTTTTT+TGG | + | chr1_3:11617123-11617142 | None:intergenic | 10.0% |
| !!! | AAAATAAAAAGTGTTTTTAT+GGG | + | chr1_3:11618262-11618281 | None:intergenic | 10.0% |
| !!! | AAAAATAAAAAGTGTTTTTA+TGG | + | chr1_3:11618263-11618282 | None:intergenic | 10.0% |
| !! | GATATTAAAAAAAAAAATTG+AGG | + | chr1_3:11619592-11619611 | None:intergenic | 10.0% |
| !!! | AAAATAAAACGTATTTTTAT+GGG | + | chr1_3:11620813-11620832 | None:intergenic | 10.0% |
| !!! | AAAAATAAAACGTATTTTTA+TGG | + | chr1_3:11620814-11620833 | None:intergenic | 10.0% |
| !! | AATTTATAACTTAAATCTTA+TGG | - | chr1_3:11621405-11621424 | Msa0104060:intron | 10.0% |
| !!! | TTTTAAGTTAATCAAATATA+TGG | + | chr1_3:11622822-11622841 | None:intergenic | 10.0% |
| !! | AATCGTTAATTTATAGATTT+AGG | + | chr1_3:11615746-11615765 | None:intergenic | 15.0% |
| !! | TACATATTATCGTAAAATAT+AGG | - | chr1_3:11615872-11615891 | Msa0104060:intron | 15.0% |
| !!! | ATTAGTCTTTTAAGTTATTT+TGG | + | chr1_3:11616145-11616164 | None:intergenic | 15.0% |
| !!! | AAAACATTGATTCTATTTTA+GGG | + | chr1_3:11616269-11616288 | None:intergenic | 15.0% |
| !!! | AAAAACATTGATTCTATTTT+AGG | + | chr1_3:11616270-11616289 | None:intergenic | 15.0% |
| !! | TTCAAAAAAAATTCAATTGA+AGG | - | chr1_3:11616308-11616327 | Msa0104060:intron | 15.0% |
| !! | TATGTATATATGTCAATATA+GGG | + | chr1_3:11616643-11616662 | None:intergenic | 15.0% |
| !! | ATATGTATATATGTCAATAT+AGG | + | chr1_3:11616644-11616663 | None:intergenic | 15.0% |
| !! | ATCAATGATCTAATTTAAAT+AGG | - | chr1_3:11616926-11616945 | Msa0104060:intron | 15.0% |
| !!! | AATTTTTTTTTTGGAAGAAA+GGG | + | chr1_3:11617026-11617045 | None:intergenic | 15.0% |
| !!! | TAATTTTTTTTTTGGAAGAA+AGG | + | chr1_3:11617027-11617046 | None:intergenic | 15.0% |
| !! | TATTATAGAACAAATACATA+AGG | + | chr1_3:11617448-11617467 | None:intergenic | 15.0% |
| !!! | TAATTAGTTTTTGACATTAT+GGG | + | chr1_3:11621216-11621235 | None:intergenic | 15.0% |
| !!! | ATAATTAGTTTTTGACATTA+TGG | + | chr1_3:11621217-11621236 | None:intergenic | 15.0% |
| !! | ATTATAATTATGTGTCTATT+TGG | - | chr1_3:11621247-11621266 | Msa0104060:intron | 15.0% |
| !! | AATTATCAAAAAGATCTATA+AGG | + | chr1_3:11621375-11621394 | None:intergenic | 15.0% |
| !!! | TTTTTTGAATTAAGAATAGA+GGG | + | chr1_3:11621457-11621476 | None:intergenic | 15.0% |
| !!! | ATTTTTTGAATTAAGAATAG+AGG | + | chr1_3:11621458-11621477 | None:intergenic | 15.0% |
| !!! | TGCAAAATTTTTATAATATG+AGG | - | chr1_3:11622003-11622022 | Msa0104060:intron | 15.0% |
| !!! | ATTTTTATAATATGAGGAAA+AGG | - | chr1_3:11622009-11622028 | Msa0104060:intron | 15.0% |
| !! | AATCAATATTGAATACTATA+TGG | - | chr1_3:11622182-11622201 | Msa0104060:intron | 15.0% |
| !! | ATCAATATTGAATACTATAT+GGG | - | chr1_3:11622183-11622202 | Msa0104060:intron | 15.0% |
| !! | AATTAAGTTAACCAAATATA+TGG | - | chr1_3:11622637-11622656 | Msa0104060:CDS | 15.0% |
| !! | AAAAATAGAAGAATAAAGAT+AGG | + | chr1_3:11622900-11622919 | None:intergenic | 15.0% |
| !!! | GACAATTTTCTTTTTAAGAT+AGG | - | chr1_3:11615652-11615671 | Msa0104060:intron | 20.0% |
| !!! | TAGGATTTAGATTTTAGTAT+AGG | - | chr1_3:11615671-11615690 | Msa0104060:intron | 20.0% |
| !!! | AGGATTTAGATTTTAGTATA+GGG | - | chr1_3:11615672-11615691 | Msa0104060:intron | 20.0% |
| !! | ATGTTCTCAAAATAACTTAA+AGG | + | chr1_3:11616007-11616026 | None:intergenic | 20.0% |
| !!! | AAGTTATTTTGAGAACATAT+TGG | - | chr1_3:11616009-11616028 | Msa0104060:intron | 20.0% |
| !! | TAACCATTAATTGAAAGATT+TGG | - | chr1_3:11616406-11616425 | Msa0104060:intron | 20.0% |
| !!! | GAAAAAGCATTATATGAATA+AGG | + | chr1_3:11616674-11616693 | None:intergenic | 20.0% |
| !!! | TTAGTCTTAATTAAGTCTAT+TGG | + | chr1_3:11616826-11616845 | None:intergenic | 20.0% |
| !! | TATACATAGCAATATAGATA+TGG | - | chr1_3:11617699-11617718 | Msa0104060:intron | 20.0% |
| !! | ATACATAGCAATATAGATAT+GGG | - | chr1_3:11617700-11617719 | Msa0104060:intron | 20.0% |
| !! | ATTCACAACAATAATAATAC+TGG | + | chr1_3:11617731-11617750 | None:intergenic | 20.0% |
| !! | TTTACAAAAGAGATATCAAT+AGG | - | chr1_3:11617971-11617990 | Msa0104060:intron | 20.0% |
| !! | TTGAACGATTAATAAGATTT+CGG | - | chr1_3:11619452-11619471 | Msa0104060:intron | 20.0% |
| !! | TTTACAAAAGAGATATCAAT+GGG | - | chr1_3:11617971-11617990 | Msa0104060:intron | 20.0% |
| !!! | ATTTTCCATTCGTAAAAAAT+CGG | + | chr1_3:11620881-11620900 | None:intergenic | 20.0% |
| !! | AGAATTTCTGTATATTAAAG+TGG | + | chr1_3:11621025-11621044 | None:intergenic | 20.0% |
| !! | TAATCCAAAAATTGAAAATG+CGG | + | chr1_3:11621079-11621098 | None:intergenic | 20.0% |
| !!! | TTTTTGAATTAAGAATAGAG+GGG | + | chr1_3:11621456-11621475 | None:intergenic | 20.0% |
| !! | GTATGAAATGACATAAAAAA+TGG | + | chr1_3:11621531-11621550 | None:intergenic | 20.0% |
| !!! | AGAGAACTATAAAAAAGTAT+CGG | + | chr1_3:11622072-11622091 | None:intergenic | 20.0% |
| !!! | TTTTTATAGTTCTCTCATAT+AGG | - | chr1_3:11622077-11622096 | Msa0104060:intron | 20.0% |
| !!! | TTTTATAGTTCTCTCATATA+GGG | - | chr1_3:11622078-11622097 | Msa0104060:intron | 20.0% |
| !!! | TATAGGGATGTTTTTTTTTA+AGG | - | chr1_3:11622094-11622113 | Msa0104060:intron | 20.0% |
| !!! | GTATTCAATATTGATTTACT+TGG | + | chr1_3:11622178-11622197 | None:intergenic | 20.0% |
| !! | TCAATATTGAATACTATATG+GGG | - | chr1_3:11622184-11622203 | Msa0104060:intron | 20.0% |
| !! | CTAAATTGTAAAAGTTAATG+AGG | + | chr1_3:11622339-11622358 | None:intergenic | 20.0% |
| !!! | AATAAATTCTGGAAAAATAG+AGG | + | chr1_3:11622693-11622712 | None:intergenic | 20.0% |
| !!! | CTATTTTTCCAGAATTTATT+TGG | - | chr1_3:11622693-11622712 | Msa0104060:CDS | 20.0% |
| !! | TTAGTTAACCAAATAAATTC+TGG | + | chr1_3:11622704-11622723 | None:intergenic | 20.0% |
| !! | AATTTATTTGGTTAACTAAG+TGG | - | chr1_3:11622705-11622724 | Msa0104060:CDS | 20.0% |
| !! | ATTTAGAAACTGAAAAATGT+GGG | + | chr1_3:11622764-11622783 | None:intergenic | 20.0% |
| !!! | TCTTTATTCTTCTATTTTTG+AGG | - | chr1_3:11622901-11622920 | Msa0104060:CDS | 20.0% |
| !!! | CTTTATTCTTCTATTTTTGA+GGG | - | chr1_3:11622902-11622921 | Msa0104060:CDS | 20.0% |
| !!! | TTTATTCTTCTATTTTTGAG+GGG | - | chr1_3:11622903-11622922 | Msa0104060:CDS | 20.0% |
| !!! | GTTTTTGAAAACTAAGATAA+AGG | + | chr1_3:11623034-11623053 | None:intergenic | 20.0% |
| ! | ATTGTAAGAACTTGTGAAAT+TGG | + | chr1_3:11615157-11615176 | None:intergenic | 25.0% |
| ! | TCTTACAATTATAACTACCA+CGG | - | chr1_3:11615168-11615187 | Msa0104060:intron | 25.0% |
| !!! | GGATTTAGATTTTAGTATAG+GGG | - | chr1_3:11615673-11615692 | Msa0104060:intron | 25.0% |
| ! | TGAAATAAAGAGTTCTTTGT+CGG | - | chr1_3:11615773-11615792 | Msa0104060:intron | 25.0% |
| ! | AATATAGGCTAAATTACAGT+CGG | - | chr1_3:11615887-11615906 | Msa0104060:intron | 25.0% |
| !!! | ATTGGTCCTTTAAGTTATTT+TGG | - | chr1_3:11615938-11615957 | Msa0104060:intron | 25.0% |
| ! | TTTAGGGAAAATTACATCAT+GGG | + | chr1_3:11616253-11616272 | None:intergenic | 25.0% |
| !!! | TTTTAGGGAAAATTACATCA+TGG | + | chr1_3:11616254-11616273 | None:intergenic | 25.0% |
| ! | ACACCAAATCTTTCAATTAA+TGG | + | chr1_3:11616412-11616431 | None:intergenic | 25.0% |
| ! | TGCACTCAAATATGTTTATT+TGG | - | chr1_3:11616437-11616456 | Msa0104060:intron | 25.0% |
| ! | TATCATAATATGTTTGCCAT+TGG | - | chr1_3:11616510-11616529 | Msa0104060:intron | 25.0% |
| ! | TACTTTACACCCTATAATAT+AGG | - | chr1_3:11616554-11616573 | Msa0104060:intron | 25.0% |
| ! | CAGAAATGACCTATATTATA+GGG | + | chr1_3:11616566-11616585 | None:intergenic | 25.0% |
| ! | TCAGAAATGACCTATATTAT+AGG | + | chr1_3:11616567-11616586 | None:intergenic | 25.0% |
| ! | TTTCTGATTTACCTTTGTAA+TGG | - | chr1_3:11616580-11616599 | Msa0104060:intron | 25.0% |
| !! | GTCTATTGGTCTATTTAATT+AGG | + | chr1_3:11616812-11616831 | None:intergenic | 25.0% |
| !!! | AATTGTTGTTTGAAAACACA+TGG | + | chr1_3:11616895-11616914 | None:intergenic | 25.0% |
| !! | TTTTCAAACAACAATTGAAG+TGG | - | chr1_3:11616899-11616918 | Msa0104060:intron | 25.0% |
| ! | TTTCAAACAACAATTGAAGT+GGG | - | chr1_3:11616900-11616919 | Msa0104060:intron | 25.0% |
| ! | GATCTAATTTAAATAGGCTA+TGG | - | chr1_3:11616932-11616951 | Msa0104060:intron | 25.0% |
| !! | TAAATAGGCTATGGATTAAT+AGG | - | chr1_3:11616941-11616960 | Msa0104060:intron | 25.0% |
| ! | AACTCATTGAATAAATCATC+CGG | + | chr1_3:11616998-11617017 | None:intergenic | 25.0% |
| !! | AAGCATATGAAACATTCTTT+TGG | + | chr1_3:11617087-11617106 | None:intergenic | 25.0% |
| ! | AACTCAAATAAATACCATGT+CGG | - | chr1_3:11617292-11617311 | Msa0104060:intron | 25.0% |
| !! | TTTATAATTTAAGACCGACA+TGG | + | chr1_3:11617309-11617328 | None:intergenic | 25.0% |
| ! | TTGATTATAAATGTGATCAG+AGG | - | chr1_3:11617513-11617532 | Msa0104060:intron | 25.0% |
| !!! | ACCAGTGCATAATATTTTAA+AGG | - | chr1_3:11617571-11617590 | Msa0104060:intron | 25.0% |
| !!! | ACCTTTAAAATATTATGCAC+TGG | + | chr1_3:11617575-11617594 | None:intergenic | 25.0% |
| ! | TACTCATCATTATAGTGAAA+CGG | + | chr1_3:11617949-11617968 | None:intergenic | 25.0% |
| !! | TTTGTATAGAGTTTGTTTCT+TGG | + | chr1_3:11618118-11618137 | None:intergenic | 25.0% |
| !!! | TTTTGAAAGTGACTCAAAAT+TGG | + | chr1_3:11618363-11618382 | None:intergenic | 25.0% |
| ! | AGAATTCATGAAAATGATGA+AGG | + | chr1_3:11619338-11619357 | None:intergenic | 25.0% |
| !! | GGGGTATTAAAAAAATTGAA+GGG | + | chr1_3:11619629-11619648 | None:intergenic | 25.0% |
| !! | ATTTTCTGTCTTCATGTATA+CGG | - | chr1_3:11619654-11619673 | Msa0104060:intron | 25.0% |
| ! | AAAGAATAATCAAGTACCAT+GGG | + | chr1_3:11620246-11620265 | None:intergenic | 25.0% |
| ! | TACTCATCATTATAGTGAAA+CGG | + | chr1_3:11617949-11617968 | None:intergenic | 25.0% |
| ! | CTTTACAAAAGAGATATCAA+TGG | - | chr1_3:11617970-11617989 | Msa0104060:intron | 25.0% |
| !! | TTTGTATAGAGTTTGTTTCT+TGG | + | chr1_3:11618118-11618137 | None:intergenic | 25.0% |
| !!! | AGTGTAAACTTTGAGATATA+GGG | + | chr1_3:11620733-11620752 | None:intergenic | 25.0% |
| ! | GAAAATCATTCATAAAATGC+AGG | - | chr1_3:11621174-11621193 | Msa0104060:intron | 25.0% |
| !! | TTGGTGTTTGCTTTAATATT+TGG | - | chr1_3:11621626-11621645 | Msa0104060:intron | 25.0% |
| ! | TGGTGTTTGCTTTAATATTT+GGG | - | chr1_3:11621627-11621646 | Msa0104060:intron | 25.0% |
| ! | TTTAATTCCTAAGTCTTTGT+TGG | - | chr1_3:11621939-11621958 | Msa0104060:intron | 25.0% |
| !!! | TCAATATTGATTTACTTGGA+AGG | + | chr1_3:11622174-11622193 | None:intergenic | 25.0% |
| ! | CAATATTGAATACTATATGG+GGG | - | chr1_3:11622185-11622204 | Msa0104060:intron | 25.0% |
| !!! | ATACTTTCGTTTTATTTGTG+TGG | - | chr1_3:11622484-11622503 | Msa0104060:intron | 25.0% |
| ! | AAAATGTAAAGAGAAGTCTT+TGG | - | chr1_3:11622537-11622556 | Msa0104060:CDS | 25.0% |
| ! | AAATGTAAAGAGAAGTCTTT+GGG | - | chr1_3:11622538-11622557 | Msa0104060:CDS | 25.0% |
| !! | TTTTCTATTTCAGCAATGAT+AGG | - | chr1_3:11622571-11622590 | Msa0104060:CDS | 25.0% |
| !!! | TTTTTTCAGAGTGATACAAA+GGG | + | chr1_3:11622619-11622638 | None:intergenic | 25.0% |
| !!! | ATTTTTTCAGAGTGATACAA+AGG | + | chr1_3:11622620-11622639 | None:intergenic | 25.0% |
| !!! | GATCACATATTTTTAGTTTG+TGG | - | chr1_3:11622667-11622686 | Msa0104060:CDS | 25.0% |
| ! | CATTTAGAAACTGAAAAATG+TGG | + | chr1_3:11622765-11622784 | None:intergenic | 25.0% |
| !!! | CATTTTTCAGTTTCTAAATG+TGG | - | chr1_3:11622765-11622784 | Msa0104060:intron | 25.0% |
| !!! | TACAAAGAGGTATATTTTTG+TGG | - | chr1_3:11622854-11622873 | Msa0104060:CDS | 25.0% |
| ! | AAGCAGTAAATAATGAACAT+TGG | + | chr1_3:11623003-11623022 | None:intergenic | 25.0% |
| ! | AACTTTCTTAGATAATCCAA+AGG | + | chr1_3:11623163-11623182 | None:intergenic | 25.0% |
| ! | AAGAAGGTGGACAATAATTT+TGG | + | chr1_3:11614900-11614919 | None:intergenic | 30.0% |
| ! | ACAATTCGATTAGTTGATTC+CGG | - | chr1_3:11615081-11615100 | Msa0104060:intron | 30.0% |
| CTTACAATTATAACTACCAC+GGG | - | chr1_3:11615169-11615188 | Msa0104060:intron | 30.0% | |
| TTACAATTATAACTACCACG+GGG | - | chr1_3:11615170-11615189 | Msa0104060:intron | 30.0% | |
| GGATATGTATTCACATACAT+AGG | + | chr1_3:11615273-11615292 | None:intergenic | 30.0% | |
| ATACATATCCATGCATCAAA+TGG | - | chr1_3:11615283-11615302 | Msa0104060:intron | 30.0% | |
| ATATAGGCTAAATTACAGTC+GGG | - | chr1_3:11615888-11615907 | Msa0104060:intron | 30.0% | |
| ! | GTTTGAGGTTTGTAATAGAT+TGG | - | chr1_3:11615920-11615939 | Msa0104060:intron | 30.0% |
| GTGCAACCAAAATAACTTAA+AGG | + | chr1_3:11615947-11615966 | None:intergenic | 30.0% | |
| ! | ACATAAGTCCTTTAAGTTTG+AGG | - | chr1_3:11615965-11615984 | Msa0104060:intron | 30.0% |
| GTTACAAACCTCAAACTTAA+AGG | + | chr1_3:11615976-11615995 | None:intergenic | 30.0% | |
| ! | ATATTGGTCCTTTAAGTTTG+AGG | - | chr1_3:11616025-11616044 | Msa0104060:intron | 30.0% |
| GTTACAAACCTCAAACTTAA+AGG | + | chr1_3:11615976-11615995 | None:intergenic | 30.0% | |
| ! | ACATAAGTCCTTTAAGTTTG+TGG | + | chr1_3:11615965-11615984 | None:intergenic | 30.0% |
| CAAACTTAAAGGACTTATGT+AGG | - | chr1_3:11616178-11616197 | Msa0104060:intron | 30.0% | |
| CTTACAAACCTCAAACTTAA+AGG | - | chr1_3:11616227-11616246 | Msa0104060:intron | 30.0% | |
| !! | AATTGAAAGATTTGGTGTAC+CGG | - | chr1_3:11616414-11616433 | Msa0104060:intron | 30.0% |
| ATAAACATATTTGAGTGCAC+CGG | + | chr1_3:11616436-11616455 | None:intergenic | 30.0% | |
| AATCTACTACTAGGTTAAGT+AGG | - | chr1_3:11616970-11616989 | Msa0104060:intron | 30.0% | |
| ACTCATTGAATAAATCATCC+GGG | + | chr1_3:11616997-11617016 | None:intergenic | 30.0% | |
| !! | TTGACAAACGTTCTGAAAAA+GGG | + | chr1_3:11617179-11617198 | None:intergenic | 30.0% |
| !! | TTTGACAAACGTTCTGAAAA+AGG | + | chr1_3:11617180-11617199 | None:intergenic | 30.0% |
| AGTATGCTATTAAGTTCATC+GGG | + | chr1_3:11617375-11617394 | None:intergenic | 30.0% | |
| GAGTATGCTATTAAGTTCAT+CGG | + | chr1_3:11617376-11617395 | None:intergenic | 30.0% | |
| TTGTTTATAATGTGACCGAA+GGG | + | chr1_3:11617398-11617417 | None:intergenic | 30.0% | |
| TTTGTTTATAATGTGACCGA+AGG | + | chr1_3:11617399-11617418 | None:intergenic | 30.0% | |
| AGTGTAAACATTGAGAAAGA+GGG | + | chr1_3:11618182-11618201 | None:intergenic | 30.0% | |
| !! | TGATTTGGTTCCAATTTATG+GGG | + | chr1_3:11618237-11618256 | None:intergenic | 30.0% |
| !! | CTGATTTGGTTCCAATTTAT+GGG | + | chr1_3:11618238-11618257 | None:intergenic | 30.0% |
| ! | TCATCACTAATTTAGAGTCA+AGG | + | chr1_3:11618395-11618414 | None:intergenic | 30.0% |
| TACCTAAAATTCCTTGAGTA+TGG | + | chr1_3:11618547-11618566 | None:intergenic | 30.0% | |
| AAAAAAAAAATTGAGGCCCA+TGG | + | chr1_3:11619585-11619604 | None:intergenic | 30.0% | |
| !! | GGGGGTATTAAAAAAATTGA+AGG | + | chr1_3:11619630-11619649 | None:intergenic | 30.0% |
| GTATACATGAAGACAGAAAA+TGG | + | chr1_3:11619655-11619674 | None:intergenic | 30.0% | |
| !! | TATAAGGTGTCGTATATATG+CGG | + | chr1_3:11619704-11619723 | None:intergenic | 30.0% |
| TTTGTACATGACAAAGTCTT+TGG | + | chr1_3:11619962-11619981 | None:intergenic | 30.0% | |
| CAAAGAATAATCAAGTACCA+TGG | + | chr1_3:11620247-11620266 | None:intergenic | 30.0% | |
| AGAAACCAAAACAAAGTGTA+TGG | - | chr1_3:11620357-11620376 | Msa0104060:intron | 30.0% | |
| !! | TTGTTCCATACACTTTGTTT+TGG | + | chr1_3:11620365-11620384 | None:intergenic | 30.0% |
| !! | GTGTAAACTTTGAGATATAG+GGG | + | chr1_3:11620732-11620751 | None:intergenic | 30.0% |
| !! | CAGTGTAAACTTTGAGATAT+AGG | + | chr1_3:11620734-11620753 | None:intergenic | 30.0% |
| ! | GATTTGGTTCCAATTTATGA+GGG | + | chr1_3:11620787-11620806 | None:intergenic | 30.0% |
| !! | TGATTTGGTTCCAATTTATG+AGG | + | chr1_3:11618237-11618256 | None:intergenic | 30.0% |
| TCATAAATTGGAACCAAATC+AGG | - | chr1_3:11620787-11620806 | Msa0104060:intron | 30.0% | |
| ! | AAAAATCGGAGTACGATTTT+TGG | + | chr1_3:11620916-11620935 | None:intergenic | 30.0% |
| TTGTGAAAGTGACTCAAAAT+TGG | + | chr1_3:11620984-11621003 | None:intergenic | 30.0% | |
| ! | TTCTCCGCATTTTCAATTTT+TGG | - | chr1_3:11621072-11621091 | Msa0104060:intron | 30.0% |
| TCTGTTACCTTTGAATTTCA+TGG | + | chr1_3:11621135-11621154 | None:intergenic | 30.0% | |
| ATGAAATTCAAAGGTAACAG+AGG | - | chr1_3:11621134-11621153 | Msa0104060:intron | 30.0% | |
| ! | TAACAGAGGTATATCTATGT+AGG | - | chr1_3:11621148-11621167 | Msa0104060:intron | 30.0% |
| ! | CATAAAATGCAGGATTTTTC+CGG | - | chr1_3:11621184-11621203 | Msa0104060:intron | 30.0% |
| ! | ACGACTAAAAAAGACTTGTT+TGG | - | chr1_3:11621314-11621333 | Msa0104060:intron | 30.0% |
| !! | CTTCTTAAAGGCTTTTAGTT+TGG | - | chr1_3:11621607-11621626 | Msa0104060:intron | 30.0% |
| !! | ATGATAGATGACTTTGAAGT+AGG | - | chr1_3:11621977-11621996 | Msa0104060:intron | 30.0% |
| !! | TGATAGATGACTTTGAAGTA+GGG | - | chr1_3:11621978-11621997 | Msa0104060:intron | 30.0% |
| !! | CTATAAAAAAGTATCGGAGA+AGG | + | chr1_3:11622066-11622085 | None:intergenic | 30.0% |
| GAAATATAAACATCCATGCA+AGG | - | chr1_3:11622118-11622137 | Msa0104060:intron | 30.0% | |
| !! | AGTTAAGAAACCCATTTTTG+AGG | - | chr1_3:11622208-11622227 | Msa0104060:intron | 30.0% |
| GAACAATGTTCCTCAAAAAT+GGG | + | chr1_3:11622221-11622240 | None:intergenic | 30.0% | |
| ATGACGAAACAATGTACATA+TGG | + | chr1_3:11622310-11622329 | None:intergenic | 30.0% | |
| !!! | AATCAATTTTGAGACCTTAG+AGG | + | chr1_3:11622370-11622389 | None:intergenic | 30.0% |
| GTCTCAAAATTGATTATCCT+CGG | - | chr1_3:11622375-11622394 | Msa0104060:intron | 30.0% | |
| !! | TTTTTCAGAGTGATACAAAG+GGG | + | chr1_3:11622618-11622637 | None:intergenic | 30.0% |
| TTAACTAAGTGGAAAAACAG+CGG | - | chr1_3:11622716-11622735 | Msa0104060:CDS | 30.0% | |
| ! | ATTTTTGTGGTCACACATTA+AGG | - | chr1_3:11622867-11622886 | Msa0104060:CDS | 30.0% |
| ACAGGACTACTACAAATAAT+GGG | - | chr1_3:11623105-11623124 | Msa0104060:CDS | 30.0% | |
| ! | TCTAAATTTAGCATCGAGTT+TGG | - | chr1_3:11623189-11623208 | Msa0104060:CDS | 30.0% |
| CAACAGCAGCTATAACAATT+TGG | + | chr1_3:11614822-11614841 | None:intergenic | 35.0% | |
| ! | ATTTTTCCACATGAAGAAGG+TGG | + | chr1_3:11614913-11614932 | None:intergenic | 35.0% |
| ! | CTGATTTTTCCACATGAAGA+AGG | + | chr1_3:11614916-11614935 | None:intergenic | 35.0% |
| GGATCATTCTTAAGTCGAAA+CGG | + | chr1_3:11614952-11614971 | None:intergenic | 35.0% | |
| GTTTCGACTTAAGAATGATC+CGG | - | chr1_3:11614951-11614970 | Msa0104060:intron | 35.0% | |
| TGTTAAGAAATAGCGAGGAA+TGG | + | chr1_3:11615130-11615149 | None:intergenic | 35.0% | |
| GATGTTGTTAAGAAATAGCG+AGG | + | chr1_3:11615135-11615154 | None:intergenic | 35.0% | |
| ! | TTAGAATGCCATTTGATGCA+TGG | + | chr1_3:11615294-11615313 | None:intergenic | 35.0% |
| TGCATCAAATGGCATTCTAA+AGG | - | chr1_3:11615294-11615313 | Msa0104060:intron | 35.0% | |
| ATTCATGGAATCCTAAGCAA+TGG | - | chr1_3:11615459-11615478 | Msa0104060:intron | 35.0% | |
| TAAGGTCAAATCCATTGCTT+AGG | + | chr1_3:11615473-11615492 | None:intergenic | 35.0% | |
| ! | CAATGGATTTGACCTTACAT+GGG | - | chr1_3:11615476-11615495 | Msa0104060:intron | 35.0% |
| AGTGTCACAAAAATCTTCAC+AGG | + | chr1_3:11615511-11615530 | None:intergenic | 35.0% | |
| CATTAAATTGGCAGTTCTGT+AGG | + | chr1_3:11615536-11615555 | None:intergenic | 35.0% | |
| CTACAGAACTGCCAATTTAA+TGG | - | chr1_3:11615534-11615553 | Msa0104060:intron | 35.0% | |
| ! | TGCCAATTTAATGGACAGAT+CGG | - | chr1_3:11615543-11615562 | Msa0104060:intron | 35.0% |
| AGTGTGAACTTGATTATTGC+AGG | - | chr1_3:11615574-11615593 | Msa0104060:intron | 35.0% | |
| CAATTGACAAAAAGTCCCAA+TGG | + | chr1_3:11615603-11615622 | None:intergenic | 35.0% | |
| ! | TTGGGACTTTTTGTCAATTG+TGG | - | chr1_3:11615603-11615622 | Msa0104060:intron | 35.0% |
| TACGCTACACTTGTAAATTG+AGG | - | chr1_3:11615701-11615720 | Msa0104060:intron | 35.0% | |
| ACTTGTAAATTGAGGTGTAC+CGG | - | chr1_3:11615709-11615728 | Msa0104060:intron | 35.0% | |
| TATAGGCTAAATTACAGTCG+GGG | - | chr1_3:11615889-11615908 | Msa0104060:intron | 35.0% | |
| ! | GTTTGAGGTTTGTAACAGAT+TGG | - | chr1_3:11615980-11615999 | Msa0104060:intron | 35.0% |
| TGTTAACCAAACATACGATG+TGG | + | chr1_3:11616074-11616093 | None:intergenic | 35.0% | |
| GTTACGAACCACAAACTTAA+AGG | - | chr1_3:11616167-11616186 | Msa0104060:intron | 35.0% | |
| CTGATTTACCTTTGTAATGG+AGG | - | chr1_3:11616583-11616602 | Msa0104060:intron | 35.0% | |
| TAATGGAGGCTCTTCAATTT+GGG | - | chr1_3:11616597-11616616 | Msa0104060:intron | 35.0% | |
| CTCATTGAATAAATCATCCG+GGG | + | chr1_3:11616996-11617015 | None:intergenic | 35.0% | |
| ACTTAATAGCATACTCCCTT+CGG | - | chr1_3:11617380-11617399 | Msa0104060:intron | 35.0% | |
| TGCTATGTATACTCCTAACT+TGG | + | chr1_3:11617690-11617709 | None:intergenic | 35.0% | |
| !! | CCACACATCAAGTTTGTTAT+TGG | + | chr1_3:11617770-11617789 | None:intergenic | 35.0% |
| CCAATAACAAACTTGATGTG+TGG | - | chr1_3:11617767-11617786 | Msa0104060:intron | 35.0% | |
| !! | TCGTTCCATACACTTTGTTT+TGG | + | chr1_3:11617813-11617832 | None:intergenic | 35.0% |
| !! | TCTCTCGTTGTTTTCTACTT+TGG | + | chr1_3:11617849-11617868 | None:intergenic | 35.0% |
| !! | AAGAATTTGTTGACCCAGTT+CGG | - | chr1_3:11617887-11617906 | Msa0104060:intron | 35.0% |
| CATCATTATAGTGAAACGGA+GGG | + | chr1_3:11617945-11617964 | None:intergenic | 35.0% | |
| TCATCATTATAGTGAAACGG+AGG | + | chr1_3:11617946-11617965 | None:intergenic | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | + | chr1_3:11618053-11618072 | None:intergenic | 35.0% | |
| AATCCTAATAGTGTTTCCCA+AGG | - | chr1_3:11618061-11618080 | Msa0104060:intron | 35.0% | |
| TTTCTTGGCAACAAACACTA+AGG | + | chr1_3:11618103-11618122 | None:intergenic | 35.0% | |
| GAAAGGCAACAACAAAACTA+GGG | + | chr1_3:11618141-11618160 | None:intergenic | 35.0% | |
| AGAAAGGCAACAACAAAACT+AGG | + | chr1_3:11618142-11618161 | None:intergenic | 35.0% | |
| TGTAAACATTGAGAAAGAGG+GGG | + | chr1_3:11618180-11618199 | None:intergenic | 35.0% | |
| GTGTAAACATTGAGAAAGAG+GGG | + | chr1_3:11618181-11618200 | None:intergenic | 35.0% | |
| CAGTGTAAACATTGAGAAAG+AGG | + | chr1_3:11618183-11618202 | None:intergenic | 35.0% | |
| !! | TAAAAGCATCCCCCATAAAT+TGG | - | chr1_3:11618224-11618243 | Msa0104060:intron | 35.0% |
| ! | GATTTGGTTCCAATTTATGG+GGG | + | chr1_3:11618236-11618255 | None:intergenic | 35.0% |
| !! | CCTGATTTGGTTCCAATTTA+TGG | + | chr1_3:11618239-11618258 | None:intergenic | 35.0% |
| CCATAAATTGGAACCAAATC+AGG | - | chr1_3:11618236-11618255 | Msa0104060:intron | 35.0% | |
| TTTGCTGAAGCTGTCAAAAT+CGG | + | chr1_3:11618329-11618348 | None:intergenic | 35.0% | |
| ! | TCACTAATTTAGAGTCAAGG+TGG | + | chr1_3:11618392-11618411 | None:intergenic | 35.0% |
| ! | CATGGTGGTTGATGTTAAAT+TGG | + | chr1_3:11618420-11618439 | None:intergenic | 35.0% |
| ! | GTCCATACTCAAGGAATTTT+AGG | - | chr1_3:11618542-11618561 | Msa0104060:intron | 35.0% |
| TTACCCTGAAAAAAGGTCAT+GGG | + | chr1_3:11618743-11618762 | None:intergenic | 35.0% | |
| ATTACCCTGAAAAAAGGTCA+TGG | + | chr1_3:11618744-11618763 | None:intergenic | 35.0% | |
| AAGGGATTTCTTCATGAAGA+CGG | + | chr1_3:11618810-11618829 | None:intergenic | 35.0% | |
| TTCAAGGTGAAAGACATAGT+GGG | + | chr1_3:11618944-11618963 | None:intergenic | 35.0% | |
| TTTCAAGGTGAAAGACATAG+TGG | + | chr1_3:11618945-11618964 | None:intergenic | 35.0% | |
| TACTCATGATCTACCTATTG+AGG | + | chr1_3:11618973-11618992 | None:intergenic | 35.0% | |
| AAGAATACTCAAGATCAGTC+TGG | + | chr1_3:11619013-11619032 | None:intergenic | 35.0% | |
| TTCATGAATTCTCAAGTCCT+TGG | - | chr1_3:11619346-11619365 | Msa0104060:intron | 35.0% | |
| TACATTGGAACAAGTTCAAG+CGG | + | chr1_3:11619399-11619418 | None:intergenic | 35.0% | |
| TTCAAAGATACCATGCTCTA+TGG | + | chr1_3:11619437-11619456 | None:intergenic | 35.0% | |
| ! | TGATGACTTGGAGAATATTG+AGG | + | chr1_3:11619845-11619864 | None:intergenic | 35.0% |
| CAATATTCTCCAAGTCATCA+AGG | - | chr1_3:11619845-11619864 | Msa0104060:intron | 35.0% | |
| ! | CAACAAAATCCTTGATGACT+TGG | + | chr1_3:11619857-11619876 | None:intergenic | 35.0% |
| ACAACTCTACTCATTCAAGA+TGG | + | chr1_3:11619917-11619936 | None:intergenic | 35.0% | |
| !!! | AGTTTTGAGAGAAGTAGCAT+AGG | + | chr1_3:11620022-11620041 | None:intergenic | 35.0% |
| !! | AAGTGTGAGAAAGCTTTGAA+GGG | + | chr1_3:11620138-11620157 | None:intergenic | 35.0% |
| ! | AAAGTGTGAGAAAGCTTTGA+AGG | + | chr1_3:11620139-11620158 | None:intergenic | 35.0% |
| !!! | TAACGATTTTGGGTTATGGA+AGG | + | chr1_3:11620190-11620209 | None:intergenic | 35.0% |
| !!! | GAGATAACGATTTTGGGTTA+TGG | + | chr1_3:11620194-11620213 | None:intergenic | 35.0% |
| TAACCCAAAATCGTTATCTC+CGG | - | chr1_3:11620194-11620213 | Msa0104060:intron | 35.0% | |
| ! | TTACCGGAGATAACGATTTT+GGG | + | chr1_3:11620200-11620219 | None:intergenic | 35.0% |
| ! | TTTACCGGAGATAACGATTT+TGG | + | chr1_3:11620201-11620220 | None:intergenic | 35.0% |
| TGGGATATTGAGAAGTTTAC+CGG | + | chr1_3:11620216-11620235 | None:intergenic | 35.0% | |
| CTCATCGAATTCACAACAAT+TGG | + | chr1_3:11620291-11620310 | None:intergenic | 35.0% | |
| !! | CCACACATCAAGTTTGTTTT+TGG | + | chr1_3:11620322-11620341 | None:intergenic | 35.0% |
| CCAAAAACAAACTTGATGTG+TGG | - | chr1_3:11620319-11620338 | Msa0104060:intron | 35.0% | |
| !! | TCTCTCGTTGTTTTCTACTT+TGG | + | chr1_3:11617849-11617868 | None:intergenic | 35.0% |
| !! | AAGAATTTGTTGACCCAGTT+CGG | - | chr1_3:11617887-11617906 | Msa0104060:intron | 35.0% |
| CATCATTATAGTGAAACGGA+GGG | + | chr1_3:11617945-11617964 | None:intergenic | 35.0% | |
| TCATCATTATAGTGAAACGG+AGG | + | chr1_3:11617946-11617965 | None:intergenic | 35.0% | |
| TTGGTTATGGAAAGAGATTG+GGG | + | chr1_3:11620586-11620605 | None:intergenic | 35.0% | |
| CTTGGTTATGGAAAGAGATT+GGG | + | chr1_3:11620587-11620606 | None:intergenic | 35.0% | |
| TCTTGGTTATGGAAAGAGAT+TGG | + | chr1_3:11620588-11620607 | None:intergenic | 35.0% | |
| TTTCTTGGCAACAAACACTA+GGG | + | chr1_3:11618103-11618122 | None:intergenic | 35.0% | |
| GAAAGGCAACAACAAAACTA+GGG | + | chr1_3:11618141-11618160 | None:intergenic | 35.0% | |
| AGAAAGGCAACAACAAAACT+AGG | + | chr1_3:11618142-11618161 | None:intergenic | 35.0% | |
| ACTGAAACAAGGGTTTAGAA+AGG | + | chr1_3:11620709-11620728 | None:intergenic | 35.0% | |
| !! | CAAAAGCATCCCTCATAAAT+TGG | - | chr1_3:11620775-11620794 | Msa0104060:intron | 35.0% |
| !! | GTATTTTTATGGGCCTGATT+TGG | + | chr1_3:11620803-11620822 | None:intergenic | 35.0% |
| !!! | TACGATTTTTGGAGCAGAAT+TGG | + | chr1_3:11620905-11620924 | None:intergenic | 35.0% |
| CGAAGCACGATTTGAAAAAT+CGG | + | chr1_3:11620930-11620949 | None:intergenic | 35.0% | |
| TTCAAAAACACATAGACTCC+AGG | - | chr1_3:11621104-11621123 | Msa0104060:intron | 35.0% | |
| TTGAATTTCATGGTGTTTCC+TGG | + | chr1_3:11621125-11621144 | None:intergenic | 35.0% | |
| GGAAACACCATGAAATTCAA+AGG | - | chr1_3:11621125-11621144 | Msa0104060:intron | 35.0% | |
| ! | AGAGGTATATCTATGTAGGT+TGG | - | chr1_3:11621152-11621171 | Msa0104060:intron | 35.0% |
| ! | TTGACATTATGGGTTTTCAC+CGG | + | chr1_3:11621206-11621225 | None:intergenic | 35.0% |
| TCATTTCATACTTCAACCGA+TGG | - | chr1_3:11621540-11621559 | Msa0104060:intron | 35.0% | |
| TTCAACCGATGGTTTCTTAA+TGG | - | chr1_3:11621551-11621570 | Msa0104060:intron | 35.0% | |
| GGAATCCATTAAGAAACCAT+CGG | + | chr1_3:11621559-11621578 | None:intergenic | 35.0% | |
| !! | ATGGTTTCTTAATGGATTCC+TGG | - | chr1_3:11621559-11621578 | Msa0104060:intron | 35.0% |
| CCTGGATCTAATATAGAGAT+CGG | - | chr1_3:11621577-11621596 | Msa0104060:intron | 35.0% | |
| ATCGGTTGAAAGCTTCTTAA+AGG | - | chr1_3:11621595-11621614 | Msa0104060:intron | 35.0% | |
| TTTGTTGCAGATACTGTACT+CGG | - | chr1_3:11621785-11621804 | Msa0104060:intron | 35.0% | |
| TTGACTTCCAACAAAGACTT+AGG | + | chr1_3:11621949-11621968 | None:intergenic | 35.0% | |
| !! | GATAGATGACTTTGAAGTAG+GGG | - | chr1_3:11621979-11621998 | Msa0104060:intron | 35.0% |
| CGAACAATGTTCCTCAAAAA+TGG | + | chr1_3:11622222-11622241 | None:intergenic | 35.0% | |
| ! | CAAAGGGGTATACACATTAA+GGG | + | chr1_3:11622603-11622622 | None:intergenic | 35.0% |
| ! | ACAAAGGGGTATACACATTA+AGG | + | chr1_3:11622604-11622623 | None:intergenic | 35.0% |
| GATCACACAGACCATATATT+TGG | + | chr1_3:11622651-11622670 | None:intergenic | 35.0% | |
| ATTGTCAGAGTGATACAAAG+AGG | - | chr1_3:11622841-11622860 | Msa0104060:CDS | 35.0% | |
| ! | TTTCATGATATGACTTGCAC+AGG | - | chr1_3:11623087-11623106 | Msa0104060:CDS | 35.0% |
| CACAGGACTACTACAAATAA+TGG | - | chr1_3:11623104-11623123 | Msa0104060:CDS | 35.0% | |
| ATCGAGTTTGGAAGAATCAT+TGG | - | chr1_3:11623201-11623220 | Msa0104060:CDS | 35.0% | |
| CAGCAGCTATAACAATTTGG+AGG | + | chr1_3:11614819-11614838 | None:intergenic | 40.0% | |
| TATTGTCCACCTTCTTCATG+TGG | - | chr1_3:11614904-11614923 | Msa0104060:intron | 40.0% | |
| !!! | CATTGTCATGTTGTTTTCGC+AGG | + | chr1_3:11615007-11615026 | None:intergenic | 40.0% |
| ! | AGTTGATTCCGGAATTCAAG+AGG | - | chr1_3:11615092-11615111 | Msa0104060:intron | 40.0% |
| ! | GTTGATTCCGGAATTCAAGA+GGG | - | chr1_3:11615093-11615112 | Msa0104060:intron | 40.0% |
| TAAGAAATAGCGAGGAATGG+TGG | + | chr1_3:11615127-11615146 | None:intergenic | 40.0% | |
| TACATAGGATCGTTCTTCAC+TGG | + | chr1_3:11615258-11615277 | None:intergenic | 40.0% | |
| AAAACTGGGAGCTTAAACGT+TGG | - | chr1_3:11615345-11615364 | Msa0104060:intron | 40.0% | |
| ! | TCTACAGCATTTTTCCTACG+CGG | - | chr1_3:11615434-11615453 | Msa0104060:intron | 40.0% |
| ! | TTTTCCTACGCGGAAATTCA+TGG | - | chr1_3:11615444-11615463 | Msa0104060:intron | 40.0% |
| ! | GCAATGGATTTGACCTTACA+TGG | - | chr1_3:11615475-11615494 | Msa0104060:intron | 40.0% |
| CTCCGATCTGTCCATTAAAT+TGG | + | chr1_3:11615548-11615567 | None:intergenic | 40.0% | |
| ! | CAATTTAATGGACAGATCGG+AGG | - | chr1_3:11615546-11615565 | Msa0104060:intron | 40.0% |
| TGATTATTGCAGGACTCCAT+TGG | - | chr1_3:11615584-11615603 | Msa0104060:intron | 40.0% | |
| GATTATTGCAGGACTCCATT+GGG | - | chr1_3:11615585-11615604 | Msa0104060:intron | 40.0% | |
| ! | GATTTAGGAAGCAAGAGTAC+CGG | + | chr1_3:11615731-11615750 | None:intergenic | 40.0% |
| ! | ATCATGGGCCTTTAAGTTTG+AGG | + | chr1_3:11616238-11616257 | None:intergenic | 40.0% |
| TTGCCATTGGAATACACACA+TGG | - | chr1_3:11616523-11616542 | Msa0104060:intron | 40.0% | |
| TGCCATTGGAATACACACAT+GGG | - | chr1_3:11616524-11616543 | Msa0104060:intron | 40.0% | |
| AACCCATGTGTGTATTCCAA+TGG | + | chr1_3:11616529-11616548 | None:intergenic | 40.0% | |
| TTGAAGAGCCTCCATTACAA+AGG | + | chr1_3:11616594-11616613 | None:intergenic | 40.0% | |
| ! | GTAATGGAGGCTCTTCAATT+TGG | - | chr1_3:11616596-11616615 | Msa0104060:intron | 40.0% |
| AATGGAGGCTCTTCAATTTG+GGG | - | chr1_3:11616598-11616617 | Msa0104060:intron | 40.0% | |
| TAACCTAGTAGTAGATTGCC+AGG | + | chr1_3:11616967-11616986 | None:intergenic | 40.0% | |
| GTCAAAGTTGCGCATATTGA+TGG | - | chr1_3:11617194-11617213 | Msa0104060:intron | 40.0% | |
| AAGTTGCGCATATTGATGGA+AGG | - | chr1_3:11617198-11617217 | Msa0104060:intron | 40.0% | |
| AGGTAGAAAGTGAATGCCTT+AGG | - | chr1_3:11617591-11617610 | Msa0104060:intron | 40.0% | |
| GGTAGAAAGTGAATGCCTTA+GGG | - | chr1_3:11617592-11617611 | Msa0104060:intron | 40.0% | |
| GGCAACCAAAACAAAGTGTA+TGG | - | chr1_3:11617805-11617824 | Msa0104060:intron | 40.0% | |
| AGGATTGAGTCTCTTGGTTA+CGG | + | chr1_3:11618047-11618066 | None:intergenic | 40.0% | |
| TCACCTTGGGAAACACTATT+AGG | + | chr1_3:11618067-11618086 | None:intergenic | 40.0% | |
| CAACAAACACTAAGGTTTGG+GGG | + | chr1_3:11618095-11618114 | None:intergenic | 40.0% | |
| GCAACAAACACTAAGGTTTG+GGG | + | chr1_3:11618096-11618115 | None:intergenic | 40.0% | |
| GGCAACAAACACTAAGGTTT+GGG | + | chr1_3:11618097-11618116 | None:intergenic | 40.0% | |
| TGGCAACAAACACTAAGGTT+TGG | + | chr1_3:11618098-11618117 | None:intergenic | 40.0% | |
| GCTGAAACAAGGGTTTAGAA+AGG | + | chr1_3:11618158-11618177 | None:intergenic | 40.0% | |
| !! | GTGTTTTTATGGGCCTGATT+TGG | + | chr1_3:11618252-11618271 | None:intergenic | 40.0% |
| CGGAGCACGATTTGAAAAAT+CGG | + | chr1_3:11618309-11618328 | None:intergenic | 40.0% | |
| TGTAAACTTGTGGAGCTACA+TGG | + | chr1_3:11618470-11618489 | None:intergenic | 40.0% | |
| TTCGATGGTTGAAGAGGTTA+GGG | + | chr1_3:11618493-11618512 | None:intergenic | 40.0% | |
| TTTCGATGGTTGAAGAGGTT+AGG | + | chr1_3:11618494-11618513 | None:intergenic | 40.0% | |
| ACACATTTCGATGGTTGAAG+AGG | + | chr1_3:11618499-11618518 | None:intergenic | 40.0% | |
| GGACACAAGCATCTTCAAAA+GGG | + | chr1_3:11618526-11618545 | None:intergenic | 40.0% | |
| TGGACACAAGCATCTTCAAA+AGG | + | chr1_3:11618527-11618546 | None:intergenic | 40.0% | |
| ATCTTAACCCCTTCATCCAT+CGG | - | chr1_3:11618582-11618601 | Msa0104060:intron | 40.0% | |
| AAGAGATTCCGATGGATGAA+GGG | + | chr1_3:11618593-11618612 | None:intergenic | 40.0% | |
| CCTAAAATTCCTAGCGTAGT+TGG | + | chr1_3:11618641-11618660 | None:intergenic | 40.0% | |
| ! | CCAACTACGCTAGGAATTTT+AGG | - | chr1_3:11618638-11618657 | Msa0104060:intron | 40.0% |
| GAAAAAAGGTCATGGGTGAT+TGG | + | chr1_3:11618736-11618755 | None:intergenic | 40.0% | |
| !!! | ATCACCCATGACCTTTTTTC+AGG | - | chr1_3:11618736-11618755 | Msa0104060:intron | 40.0% |
| !!! | TCACCCATGACCTTTTTTCA+GGG | - | chr1_3:11618737-11618756 | Msa0104060:intron | 40.0% |
| AGAATGTATAGCACAGGTTG+CGG | + | chr1_3:11618768-11618787 | None:intergenic | 40.0% | |
| GGTTGAAGAATGTATAGCAC+AGG | + | chr1_3:11618774-11618793 | None:intergenic | 40.0% | |
| GCTATACATTCTTCAACCTC+CGG | - | chr1_3:11618776-11618795 | Msa0104060:intron | 40.0% | |
| GATTTCTTCATGAAGACGGA+AGG | + | chr1_3:11618806-11618825 | None:intergenic | 40.0% | |
| ! | ATGTACGCATTTGCTAGTTG+AGG | + | chr1_3:11618921-11618940 | None:intergenic | 40.0% |
| TCATGATCTACCTATTGAGG+TGG | + | chr1_3:11618970-11618989 | None:intergenic | 40.0% | |
| TTAAACACTCGACATCAACC+TGG | + | chr1_3:11619048-11619067 | None:intergenic | 40.0% | |
| ! | AATTGTCTCTGAGGGTTATG+AGG | + | chr1_3:11619174-11619193 | None:intergenic | 40.0% |
| AAGGATTGTCCGGAGATTAA+TGG | + | chr1_3:11619209-11619228 | None:intergenic | 40.0% | |
| TCACTTCATGAAGGATTGTC+CGG | + | chr1_3:11619219-11619238 | None:intergenic | 40.0% | |
| CAAGATGAGTCACTTCATGA+AGG | + | chr1_3:11619228-11619247 | None:intergenic | 40.0% | |
| ! | ACTTGTTACCACTCTTTCTC+CGG | - | chr1_3:11619273-11619292 | Msa0104060:intron | 40.0% |
| !! | CAAAGAAGGCACTGTTACAT+TGG | + | chr1_3:11619414-11619433 | None:intergenic | 40.0% |
| ATGAAGACAGAAAATGGCTG+GGG | + | chr1_3:11619649-11619668 | None:intergenic | 40.0% | |
| CATGAAGACAGAAAATGGCT+GGG | + | chr1_3:11619650-11619669 | None:intergenic | 40.0% | |
| ACATGAAGACAGAAAATGGC+TGG | + | chr1_3:11619651-11619670 | None:intergenic | 40.0% | |
| TATATATGCGGTACACCCAA+AGG | + | chr1_3:11619692-11619711 | None:intergenic | 40.0% | |
| TTGGAGAATATTGAGGTGCA+GGG | + | chr1_3:11619838-11619857 | None:intergenic | 40.0% | |
| !! | ATTCAAGATGGTGGAGTCAA+AGG | + | chr1_3:11619905-11619924 | None:intergenic | 40.0% |
| ACTCTACTCATTCAAGATGG+TGG | + | chr1_3:11619914-11619933 | None:intergenic | 40.0% | |
| CTCTCAAAACTTTATCCTCG+AGG | - | chr1_3:11620031-11620050 | Msa0104060:intron | 40.0% | |
| TGGGTTATGGAAGGTAAAGA+TGG | + | chr1_3:11620181-11620200 | None:intergenic | 40.0% | |
| AATATCCCACTTTGAACCCA+TGG | - | chr1_3:11620227-11620246 | Msa0104060:intron | 40.0% | |
| AAGTACCATGGGTTCAAAGT+GGG | + | chr1_3:11620235-11620254 | None:intergenic | 40.0% | |
| ! | AGGTTAATTTGGACCGAACT+GGG | + | chr1_3:11620455-11620474 | None:intergenic | 40.0% |
| ! | TAGGTTAATTTGGACCGAAC+TGG | + | chr1_3:11620456-11620475 | None:intergenic | 40.0% |
| GGTCCAAATTAACCTAGTCT+GGG | - | chr1_3:11620460-11620479 | Msa0104060:intron | 40.0% | |
| GTCCAAATTAACCTAGTCTG+GGG | - | chr1_3:11620461-11620480 | Msa0104060:intron | 40.0% | |
| TCCAAATTAACCTAGTCTGG+GGG | - | chr1_3:11620462-11620481 | Msa0104060:intron | 40.0% | |
| !! | TTGGGGCTTTGGGTAAAATT+AGG | + | chr1_3:11620569-11620588 | None:intergenic | 40.0% |
| AGGATTGAGTCTCTTGGTTA+TGG | + | chr1_3:11618047-11618066 | None:intergenic | 40.0% | |
| CACATTAGGATTGAGTCTCT+TGG | + | chr1_3:11620605-11620624 | None:intergenic | 40.0% | |
| CAATCCTAATGTGTTTCCCA+AGG | - | chr1_3:11620612-11620631 | Msa0104060:intron | 40.0% | |
| TTCACCTTGGGAAACACATT+AGG | + | chr1_3:11620619-11620638 | None:intergenic | 40.0% | |
| ! | TTTGAGGGTTGATTCACCTT+GGG | + | chr1_3:11620631-11620650 | None:intergenic | 40.0% |
| CAACAAACACTAGGGTTTGA+GGG | + | chr1_3:11620646-11620665 | None:intergenic | 40.0% | |
| GTTTCTTGGCAACAAACACT+AGG | + | chr1_3:11618104-11618123 | None:intergenic | 40.0% | |
| GATATAGGGGACTGAAACAA+GGG | + | chr1_3:11620719-11620738 | None:intergenic | 40.0% | |
| AGATATAGGGGACTGAAACA+AGG | + | chr1_3:11620720-11620739 | None:intergenic | 40.0% | |
| TAAAAAATCGGAGCACGATC+TGG | + | chr1_3:11620869-11620888 | None:intergenic | 40.0% | |
| !!! | GTGCTCCGATTTTTTACGAA+TGG | - | chr1_3:11620873-11620892 | Msa0104060:intron | 40.0% |
| !! | AATCGTGCTTCGATTTTGAC+AGG | - | chr1_3:11620938-11620957 | Msa0104060:intron | 40.0% |
| CCGATCTCTATATTAGATCC+AGG | + | chr1_3:11621580-11621599 | None:intergenic | 40.0% | |
| AACTATTACCACTCACTCGT+AGG | + | chr1_3:11621685-11621704 | None:intergenic | 40.0% | |
| ACTGTACTCGGCATTGTTAA+AGG | - | chr1_3:11621797-11621816 | Msa0104060:intron | 40.0% | |
| ! | ATTTAGAGTGTGCTCCTCTA+AGG | - | chr1_3:11622353-11622372 | Msa0104060:intron | 40.0% |
| !!! | ATCCTCGGTGTCAATTTTGA+TGG | - | chr1_3:11622390-11622409 | Msa0104060:intron | 40.0% |
| !!! | TCCTCGGTGTCAATTTTGAT+GGG | - | chr1_3:11622391-11622410 | Msa0104060:intron | 40.0% |
| GTCACGCAACTGAAAAAATG+TGG | - | chr1_3:11622787-11622806 | Msa0104060:CDS | 40.0% | |
| AAAAGTTCCGAATTAACCCG+CGG | - | chr1_3:11623135-11623154 | Msa0104060:CDS | 40.0% | |
| TAGATAATCCAAAGGTTCCG+CGG | + | chr1_3:11623155-11623174 | None:intergenic | 40.0% | |
| GCAGTTACCCTCTTGAATTC+CGG | + | chr1_3:11615103-11615122 | None:intergenic | 45.0% | |
| GATTCCATGAATTTCCGCGT+AGG | + | chr1_3:11615451-11615470 | None:intergenic | 45.0% | |
| ! | GTCGGGGTTCTTTAAGTTTG+AGG | - | chr1_3:11615905-11615924 | Msa0104060:intron | 45.0% |
| CAAACATACGATGTGGCAGA+AGG | + | chr1_3:11616067-11616086 | None:intergenic | 45.0% | |
| CTTCTGCCACATCGTATGTT+TGG | - | chr1_3:11616065-11616084 | Msa0104060:intron | 45.0% | |
| ! | AGGCTATGGATTAATAGGCC+TGG | - | chr1_3:11616946-11616965 | Msa0104060:intron | 45.0% |
| GGGATATCTAGCTAACCCTA+AGG | + | chr1_3:11617610-11617629 | None:intergenic | 45.0% | |
| ! | GGTTAGCTAGATATCCCCTT+TGG | - | chr1_3:11617613-11617632 | Msa0104060:intron | 45.0% |
| TGACACTTGAGGAGCAATCA+AGG | + | chr1_3:11617642-11617661 | None:intergenic | 45.0% | |
| TTGCTCCTCAAGTGTCACAT+AGG | - | chr1_3:11617645-11617664 | Msa0104060:intron | 45.0% | |
| TGCTCCTCAAGTGTCACATA+GGG | - | chr1_3:11617646-11617665 | Msa0104060:intron | 45.0% | |
| TTGACCCTATGTGACACTTG+AGG | + | chr1_3:11617653-11617672 | None:intergenic | 45.0% | |
| CTAACTTGGAGAGCAAGTTG+GGG | + | chr1_3:11617676-11617695 | None:intergenic | 45.0% | |
| CCTAACTTGGAGAGCAAGTT+GGG | + | chr1_3:11617677-11617696 | None:intergenic | 45.0% | |
| TCCTAACTTGGAGAGCAAGT+TGG | + | chr1_3:11617678-11617697 | None:intergenic | 45.0% | |
| GTGTGGAGCAAGTGATAATC+AGG | - | chr1_3:11617784-11617803 | Msa0104060:intron | 45.0% | |
| AGGTCAATTTGGACCGAACT+GGG | + | chr1_3:11617903-11617922 | None:intergenic | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | + | chr1_3:11617904-11617923 | None:intergenic | 45.0% | |
| GGTCCAAATTGACCTAGTCT+GGG | - | chr1_3:11617908-11617927 | Msa0104060:intron | 45.0% | |
| TCACCCAGACTAGGTCAATT+TGG | + | chr1_3:11617914-11617933 | None:intergenic | 45.0% | |
| ! | TTGGCGCTTTGGGTAGAATT+AGG | + | chr1_3:11618017-11618036 | None:intergenic | 45.0% |
| TCTTGGTTACGGGAAGAGAT+TGG | + | chr1_3:11618036-11618055 | None:intergenic | 45.0% | |
| GGATTGAGTCTCTTGGTTAC+GGG | + | chr1_3:11618046-11618065 | None:intergenic | 45.0% | |
| ! | TTTGGGGGTTGATTCACCTT+GGG | + | chr1_3:11618080-11618099 | None:intergenic | 45.0% |
| GAGGTTAGGGTGTAAACTTG+TGG | + | chr1_3:11618480-11618499 | None:intergenic | 45.0% | |
| AAGGGAGGAACACATTTCGA+TGG | + | chr1_3:11618508-11618527 | None:intergenic | 45.0% | |
| CACAAGCATCTTCAAAAGGG+AGG | + | chr1_3:11618523-11618542 | None:intergenic | 45.0% | |
| GATGCTTGTGTCCATACTCA+AGG | - | chr1_3:11618533-11618552 | Msa0104060:intron | 45.0% | |
| GGGGTTAAGATGTGTACTTG+TGG | + | chr1_3:11618573-11618592 | None:intergenic | 45.0% | |
| AGAGATTCCGATGGATGAAG+GGG | + | chr1_3:11618592-11618611 | None:intergenic | 45.0% | |
| GAAGAGATTCCGATGGATGA+AGG | + | chr1_3:11618594-11618613 | None:intergenic | 45.0% | |
| GATGTTCTGGTGAATGCTTG+TGG | + | chr1_3:11618669-11618688 | None:intergenic | 45.0% | |
| CACCAGAACATCTTCAACAC+AGG | - | chr1_3:11618677-11618696 | Msa0104060:intron | 45.0% | |
| GTCCTGTGTTGAAGATGTTC+TGG | + | chr1_3:11618682-11618701 | None:intergenic | 45.0% | |
| TGCGGGATTACCCTGAAAAA+AGG | + | chr1_3:11618750-11618769 | None:intergenic | 45.0% | |
| GAATGTATAGCACAGGTTGC+GGG | + | chr1_3:11618767-11618786 | None:intergenic | 45.0% | |
| TATGCTCTAGTGGTGAGCAA+GGG | + | chr1_3:11618828-11618847 | None:intergenic | 45.0% | |
| ! | CATCGGTAATGGTACGACTA+TGG | + | chr1_3:11618865-11618884 | None:intergenic | 45.0% |
| GGAGTTGAACACATCGGTAA+TGG | + | chr1_3:11618876-11618895 | None:intergenic | 45.0% | |
| TGAGGTGGAGTTGAACACAT+CGG | + | chr1_3:11618882-11618901 | None:intergenic | 45.0% | |
| CCTATTGAGGTGGAGTTTCA+AGG | + | chr1_3:11618960-11618979 | None:intergenic | 45.0% | |
| CCTTGAAACTCCACCTCAAT+AGG | - | chr1_3:11618957-11618976 | Msa0104060:intron | 45.0% | |
| TACTCAAGATCAGTCTGGAG+AGG | + | chr1_3:11619008-11619027 | None:intergenic | 45.0% | |
| AAGGTGATGTGTCTCACCTT+GGG | + | chr1_3:11619109-11619128 | None:intergenic | 45.0% | |
| ! | TGTTGTTTGGAGGACGAAGA+AGG | + | chr1_3:11619128-11619147 | None:intergenic | 45.0% |
| ACCCTCAGAGACAATTTGTG+CGG | - | chr1_3:11619178-11619197 | Msa0104060:intron | 45.0% | |
| TCCGCACAAATTGTCTCTGA+GGG | + | chr1_3:11619182-11619201 | None:intergenic | 45.0% | |
| GCGGAGTTACCATTAATCTC+CGG | - | chr1_3:11619197-11619216 | Msa0104060:intron | 45.0% | |
| CTAAGTGTCTCAAGAGGGAA+TGG | + | chr1_3:11619314-11619333 | None:intergenic | 45.0% | |
| CATTCCCTCTTGAGACACTT+AGG | - | chr1_3:11619312-11619331 | Msa0104060:intron | 45.0% | |
| AAGGCCTAAGTGTCTCAAGA+GGG | + | chr1_3:11619319-11619338 | None:intergenic | 45.0% | |
| ! | CAAGGAGTTGATCAAGTCCA+AGG | + | chr1_3:11619366-11619385 | None:intergenic | 45.0% |
| CTTGGACTTGATCAACTCCT+TGG | - | chr1_3:11619364-11619383 | Msa0104060:intron | 45.0% | |
| ACCATGCTCTATGGCAAAGA+AGG | + | chr1_3:11619428-11619447 | None:intergenic | 45.0% | |
| TTGAAGGGCAGTAGTACTAG+TGG | + | chr1_3:11619614-11619633 | None:intergenic | 45.0% | |
| TGAAGACAGAAAATGGCTGG+GGG | + | chr1_3:11619648-11619667 | None:intergenic | 45.0% | |
| !! | ACGGTAGTCATTTTCGCCTT+TGG | - | chr1_3:11619673-11619692 | Msa0104060:intron | 45.0% |
| !! | CGGTAGTCATTTTCGCCTTT+GGG | - | chr1_3:11619674-11619693 | Msa0104060:intron | 45.0% |
| CTTGGAGAATATTGAGGTGC+AGG | + | chr1_3:11619839-11619858 | None:intergenic | 45.0% | |
| CTTCGTAAGTTGCTCCATGA+TGG | - | chr1_3:11619879-11619898 | Msa0104060:intron | 45.0% | |
| TGGCTCATCGACAACTTCTA+AGG | + | chr1_3:11619942-11619961 | None:intergenic | 45.0% | |
| CTTTGACCACATTGATGTCG+TGG | - | chr1_3:11619990-11620009 | Msa0104060:intron | 45.0% | |
| AACCAACCACGACATCAATG+TGG | + | chr1_3:11619999-11620018 | None:intergenic | 45.0% | |
| !! | GAGAAAGCTTTGAAGGGTGA+AGG | + | chr1_3:11620132-11620151 | None:intergenic | 45.0% |
| CAAGTACCATGGGTTCAAAG+TGG | + | chr1_3:11620236-11620255 | None:intergenic | 45.0% | |
| CGGTCCAAATTAACCTAGTC+TGG | - | chr1_3:11620459-11620478 | Msa0104060:intron | 45.0% | |
| TCCCCCAGACTAGGTTAATT+TGG | + | chr1_3:11620466-11620485 | None:intergenic | 45.0% | |
| !! | GGCTTTGGGTAAAATTAGGC+AGG | + | chr1_3:11620565-11620584 | None:intergenic | 45.0% |
| TGGAAAGAGATTGGGGCTTT+GGG | + | chr1_3:11620579-11620598 | None:intergenic | 45.0% | |
| ATGGAAAGAGATTGGGGCTT+TGG | + | chr1_3:11620580-11620599 | None:intergenic | 45.0% | |
| ! | GTTTGAGGGTTGATTCACCT+TGG | + | chr1_3:11620632-11620651 | None:intergenic | 45.0% |
| GCAACAAACACTAGGGTTTG+AGG | + | chr1_3:11620647-11620666 | None:intergenic | 45.0% | |
| ACAATGTCCATGCTTCTCGT+GGG | - | chr1_3:11621049-11621068 | Msa0104060:intron | 45.0% | |
| ! | CTCATTTTCCTACGAGTGAG+TGG | - | chr1_3:11621728-11621747 | Msa0104060:intron | 45.0% |
| AGATAACACCACTCACTCGT+AGG | + | chr1_3:11621739-11621758 | None:intergenic | 45.0% | |
| TAAACATCCATGCAAGGTCG+AGG | - | chr1_3:11622124-11622143 | Msa0104060:intron | 45.0% | |
| ACCCATCAAAATTGACACCG+AGG | + | chr1_3:11622395-11622414 | None:intergenic | 45.0% | |
| ! | AAAGGTTCCGCGGGTTAATT+CGG | + | chr1_3:11623145-11623164 | None:intergenic | 45.0% |
| AGATAATCCAAAGGTTCCGC+GGG | + | chr1_3:11623154-11623173 | None:intergenic | 45.0% | |
| !!! | TTTTTTAAAAGATAAATATA+AGG | + | chr1_3:11619720-11619739 | None:intergenic | 5.0% |
| AAGAATGATCCGGCAAGCTG+CGG | - | chr1_3:11614961-11614980 | Msa0104060:intron | 50.0% | |
| TCGCAGGATAACTCGTACCT+AGG | + | chr1_3:11614991-11615010 | None:intergenic | 50.0% | |
| CACGGGGATGCATATGAAGT+CGG | - | chr1_3:11615186-11615205 | Msa0104060:intron | 50.0% | |
| TATACTACATGCCCCACCCA+TGG | + | chr1_3:11615219-11615238 | None:intergenic | 50.0% | |
| GGCCATGTTTATGCTATCGC+CGG | - | chr1_3:11615315-11615334 | Msa0104060:intron | 50.0% | |
| ! | TAATGGACAGATCGGAGGAC+TGG | - | chr1_3:11615551-11615570 | Msa0104060:intron | 50.0% |
| AGGCCTGGCAATCTACTACT+AGG | - | chr1_3:11616961-11616980 | Msa0104060:intron | 50.0% | |
| CTACTAGGTTAAGTAGGCCC+CGG | - | chr1_3:11616976-11616995 | Msa0104060:intron | 50.0% | |
| AGCAATCAAGGAGGCCAAAG+GGG | + | chr1_3:11617630-11617649 | None:intergenic | 50.0% | |
| GAGCAATCAAGGAGGCCAAA+GGG | + | chr1_3:11617631-11617650 | None:intergenic | 50.0% | |
| CACTTGAGGAGCAATCAAGG+AGG | + | chr1_3:11617639-11617658 | None:intergenic | 50.0% | |
| ! | CCCAACTTGCTCTCCAAGTT+AGG | - | chr1_3:11617674-11617693 | Msa0104060:intron | 50.0% |
| CGGTCCAAATTGACCTAGTC+TGG | - | chr1_3:11617907-11617926 | Msa0104060:intron | 50.0% | |
| ! | CGCTTTGGGTAGAATTAGGC+AGG | + | chr1_3:11618013-11618032 | None:intergenic | 50.0% |
| ! | GTTTGGGGGTTGATTCACCT+TGG | + | chr1_3:11618081-11618100 | None:intergenic | 50.0% |
| GAAAGAGGGGGCTGAAACAA+GGG | + | chr1_3:11618168-11618187 | None:intergenic | 50.0% | |
| AGAAAGAGGGGGCTGAAACA+AGG | + | chr1_3:11618169-11618188 | None:intergenic | 50.0% | |
| AAGCAAGGGAAAGAGCAGCA+TGG | + | chr1_3:11618438-11618457 | None:intergenic | 50.0% | |
| ! | CATGGTGTAGTGGGAAGCAA+GGG | + | chr1_3:11618452-11618471 | None:intergenic | 50.0% |
| ! | ACATGGTGTAGTGGGAAGCA+AGG | + | chr1_3:11618453-11618472 | None:intergenic | 50.0% |
| GTGGAGCTACATGGTGTAGT+GGG | + | chr1_3:11618461-11618480 | None:intergenic | 50.0% | |
| TGTGGAGCTACATGGTGTAG+TGG | + | chr1_3:11618462-11618481 | None:intergenic | 50.0% | |
| AATCTCTTCCGCCTTCTCGA+AGG | - | chr1_3:11618605-11618624 | Msa0104060:intron | 50.0% | |
| AAGGAGACCTTCAAGGAAGC+GGG | + | chr1_3:11618709-11618728 | None:intergenic | 50.0% | |
| CAAGGAGACCTTCAAGGAAG+CGG | + | chr1_3:11618710-11618729 | None:intergenic | 50.0% | |
| TGGATGCAAGGAGACCTTCA+AGG | + | chr1_3:11618716-11618735 | None:intergenic | 50.0% | |
| GTCATGGGTGATTGGATGCA+AGG | + | chr1_3:11618728-11618747 | None:intergenic | 50.0% | |
| !! | CATGAAGACGGAAGGCATTC+CGG | + | chr1_3:11618798-11618817 | None:intergenic | 50.0% |
| CTATGCTCTAGTGGTGAGCA+AGG | + | chr1_3:11618829-11618848 | None:intergenic | 50.0% | |
| CCTTGGGTTCTATGCTCTAG+TGG | + | chr1_3:11618838-11618857 | None:intergenic | 50.0% | |
| CCACTAGAGCATAGAACCCA+AGG | - | chr1_3:11618835-11618854 | Msa0104060:intron | 50.0% | |
| GTACGACTATGGAGGACCTT+GGG | + | chr1_3:11618854-11618873 | None:intergenic | 50.0% | |
| ! | CGGTAATGGTACGACTATGG+AGG | + | chr1_3:11618862-11618881 | None:intergenic | 50.0% |
| AGAGTACGCTCAGATTGAGG+TGG | + | chr1_3:11618897-11618916 | None:intergenic | 50.0% | |
| GGTAGAGTACGCTCAGATTG+AGG | + | chr1_3:11618900-11618919 | None:intergenic | 50.0% | |
| TCAAGATCAGTCTGGAGAGG+CGG | + | chr1_3:11619005-11619024 | None:intergenic | 50.0% | |
| TCCACTAGGCATTACTCCCA+AGG | - | chr1_3:11619090-11619109 | Msa0104060:intron | 50.0% | |
| ACCTTGGGAGTAATGCCTAG+TGG | + | chr1_3:11619094-11619113 | None:intergenic | 50.0% | |
| GAAGGTGATGTGTCTCACCT+TGG | + | chr1_3:11619110-11619129 | None:intergenic | 50.0% | |
| !! | TCTGGTGGTGTGGTGTTGTT+TGG | + | chr1_3:11619141-11619160 | None:intergenic | 50.0% |
| TCTGAGGGTTATGAGGATGC+GGG | + | chr1_3:11619167-11619186 | None:intergenic | 50.0% | |
| ! | CTCTGAGGGTTATGAGGATG+CGG | + | chr1_3:11619168-11619187 | None:intergenic | 50.0% |
| CTCCGCACAAATTGTCTCTG+AGG | + | chr1_3:11619183-11619202 | None:intergenic | 50.0% | |
| AGAGGTAACCGGAGAAAGAG+TGG | + | chr1_3:11619284-11619303 | None:intergenic | 50.0% | |
| ! | ATGGTGGAGGTAGAGGTAAC+CGG | + | chr1_3:11619295-11619314 | None:intergenic | 50.0% |
| AGTGTCTCAAGAGGGAATGG+TGG | + | chr1_3:11619311-11619330 | None:intergenic | 50.0% | |
| GAAGGCCTAAGTGTCTCAAG+AGG | + | chr1_3:11619320-11619339 | None:intergenic | 50.0% | |
| !! | TCAAGCGGCTTTGAGAACCA+AGG | + | chr1_3:11619384-11619403 | None:intergenic | 50.0% |
| GCCTTCTTTGCCATAGAGCA+TGG | - | chr1_3:11619424-11619443 | Msa0104060:intron | 50.0% | |
| ! | TCCTCAAGTTGCACCTCAAC+AGG | - | chr1_3:11619509-11619528 | Msa0104060:intron | 50.0% |
| TGCAAACAGCTCAACAGAGC+TGG | - | chr1_3:11619548-11619567 | Msa0104060:intron | 50.0% | |
| GCAAACAGCTCAACAGAGCT+GGG | - | chr1_3:11619549-11619568 | Msa0104060:intron | 50.0% | |
| AAATTGAGGCCCATGGCTGA+GGG | + | chr1_3:11619578-11619597 | None:intergenic | 50.0% | |
| AAAATTGAGGCCCATGGCTG+AGG | + | chr1_3:11619579-11619598 | None:intergenic | 50.0% | |
| TCCCTAAGAATTCGGAGGCT+CGG | + | chr1_3:11619812-11619831 | None:intergenic | 50.0% | |
| CAGGGTCGTCCCTAAGAATT+CGG | + | chr1_3:11619820-11619839 | None:intergenic | 50.0% | |
| GACCACATTGATGTCGTGGT+TGG | - | chr1_3:11619994-11620013 | Msa0104060:intron | 50.0% | |
| ATCCTCGAGGCACAAGACAA+TGG | - | chr1_3:11620044-11620063 | Msa0104060:intron | 50.0% | |
| GCACAAGACAATGGCACTTC+TGG | - | chr1_3:11620053-11620072 | Msa0104060:intron | 50.0% | |
| !! | GAAGACCAAGATGGTGGACA+AGG | + | chr1_3:11620079-11620098 | None:intergenic | 50.0% |
| AACGGAGAAGACCAAGATGG+TGG | + | chr1_3:11620085-11620104 | None:intergenic | 50.0% | |
| ACGAACGGAGAAGACCAAGA+TGG | + | chr1_3:11620088-11620107 | None:intergenic | 50.0% | |
| ! | GAAGGGTGAAGGTGTGTTAC+CGG | + | chr1_3:11620121-11620140 | None:intergenic | 50.0% |
| ATTCTTTGACCCTTGCCCCA+CGG | - | chr1_3:11620259-11620278 | Msa0104060:intron | 50.0% | |
| GGAGCACGATCTGGCAAAAT+CGG | + | chr1_3:11620860-11620879 | None:intergenic | 50.0% | |
| CACAATGTCCATGCTTCTCG+TGG | - | chr1_3:11621048-11621067 | Msa0104060:intron | 50.0% | |
| GACGATTTCCTACGAGTGAG+TGG | - | chr1_3:11621674-11621693 | Msa0104060:intron | 50.0% | |
| GAATTAACCCGCGGAACCTT+TGG | - | chr1_3:11623144-11623163 | Msa0104060:CDS | 50.0% | |
| CGACTTCATATGCATCCCCG+TGG | + | chr1_3:11615188-11615207 | None:intergenic | 55.0% | |
| ! | ATGAAGTCGGTTCTCCGCCA+TGG | - | chr1_3:11615199-11615218 | Msa0104060:intron | 55.0% |
| ! | TGAAGTCGGTTCTCCGCCAT+GGG | - | chr1_3:11615200-11615219 | Msa0104060:intron | 55.0% |
| CGCCGGCGATAGCATAAACA+TGG | + | chr1_3:11615320-11615339 | None:intergenic | 55.0% | |
| ATCGCCGGCGACATCAAAAC+TGG | - | chr1_3:11615330-11615349 | Msa0104060:intron | 55.0% | |
| TCGCCGGCGACATCAAAACT+GGG | - | chr1_3:11615331-11615350 | Msa0104060:intron | 55.0% | |
| !! | GCTCCCAGTTTTGATGTCGC+CGG | + | chr1_3:11615337-11615356 | None:intergenic | 55.0% |
| AGGCACGTCTCACCCATGTA+AGG | + | chr1_3:11615491-11615510 | None:intergenic | 55.0% | |
| GGAGCAATCAAGGAGGCCAA+AGG | + | chr1_3:11617632-11617651 | None:intergenic | 55.0% | |
| CGGGAAGAGATTGGCGCTTT+GGG | + | chr1_3:11618027-11618046 | None:intergenic | 55.0% | |
| ACGGGAAGAGATTGGCGCTT+TGG | + | chr1_3:11618028-11618047 | None:intergenic | 55.0% | |
| CAAGGGAAAGAGCAGCATGG+TGG | + | chr1_3:11618435-11618454 | None:intergenic | 55.0% | |
| GAAGGCGGAAGAGATTCCGA+TGG | + | chr1_3:11618601-11618620 | None:intergenic | 55.0% | |
| TGCAAGGACCTTCGAGAAGG+CGG | + | chr1_3:11618616-11618635 | None:intergenic | 55.0% | |
| GACTGCAAGGACCTTCGAGA+AGG | + | chr1_3:11618619-11618638 | None:intergenic | 55.0% | |
| CCTAGCGTAGTTGGACTGCA+AGG | + | chr1_3:11618632-11618651 | None:intergenic | 55.0% | |
| CCTTGCAGTCCAACTACGCT+AGG | - | chr1_3:11618629-11618648 | Msa0104060:intron | 55.0% | |
| GACATCTCCCGCTTCCTTGA+AGG | - | chr1_3:11618699-11618718 | Msa0104060:intron | 55.0% | |
| GGTACGACTATGGAGGACCT+TGG | + | chr1_3:11618855-11618874 | None:intergenic | 55.0% | |
| ATTCTTACCACCGCCTCTCC+AGG | - | chr1_3:11619027-11619046 | Msa0104060:intron | 55.0% | |
| TCGACATCAACCTGGAGAGG+CGG | + | chr1_3:11619040-11619059 | None:intergenic | 55.0% | |
| CACTCGACATCAACCTGGAG+AGG | + | chr1_3:11619043-11619062 | None:intergenic | 55.0% | |
| AGTAATGCCTAGTGGAGCGG+TGG | + | chr1_3:11619086-11619105 | None:intergenic | 55.0% | |
| GGGAGTAATGCCTAGTGGAG+CGG | + | chr1_3:11619089-11619108 | None:intergenic | 55.0% | |
| !! | GGTGGTGTGGTGTTGTTTGG+AGG | + | chr1_3:11619138-11619157 | None:intergenic | 55.0% |
| TTATGAGGATGCGGGTGCTC+TGG | + | chr1_3:11619159-11619178 | None:intergenic | 55.0% | |
| ! | AGAGGGAATGGTGGAGGTAG+AGG | + | chr1_3:11619302-11619321 | None:intergenic | 55.0% |
| GTCTCAAGAGGGAATGGTGG+AGG | + | chr1_3:11619308-11619327 | None:intergenic | 55.0% | |
| GCCTGTTGAGGTGCAACTTG+AGG | + | chr1_3:11619513-11619532 | None:intergenic | 55.0% | |
| AAGTTGCACCTCAACAGGCC+CGG | - | chr1_3:11619514-11619533 | Msa0104060:intron | 55.0% | |
| AGCCGAGCCTCCGAATTCTT+AGG | - | chr1_3:11619807-11619826 | Msa0104060:intron | 55.0% | |
| GCCGAGCCTCCGAATTCTTA+GGG | - | chr1_3:11619808-11619827 | Msa0104060:intron | 55.0% | |
| GGTCGTCCCTAAGAATTCGG+AGG | + | chr1_3:11619817-11619836 | None:intergenic | 55.0% | |
| GGTGGAGTCAAAGGCCATCA+TGG | + | chr1_3:11619896-11619915 | None:intergenic | 55.0% | |
| TGCCATTGTCTTGTGCCTCG+AGG | + | chr1_3:11620049-11620068 | None:intergenic | 55.0% | |
| !! | TCTGGCCTTGTCCACCATCT+TGG | - | chr1_3:11620071-11620090 | Msa0104060:intron | 55.0% |
| GGTCTTCTCCGTTCGTGACA+TGG | - | chr1_3:11620092-11620111 | Msa0104060:intron | 55.0% | |
| TCCGTTCGTGACATGGTGAC+CGG | - | chr1_3:11620099-11620118 | Msa0104060:intron | 55.0% | |
| ACCGGTCACCATGTCACGAA+CGG | + | chr1_3:11620103-11620122 | None:intergenic | 55.0% | |
| GTGATAGCCTCGACCTTGCA+TGG | + | chr1_3:11622134-11622153 | None:intergenic | 55.0% | |
| CTAGGATCACCGCAGCTTGC+CGG | + | chr1_3:11614973-11614992 | None:intergenic | 60.0% | |
| ACTACATGCCCCACCCATGG+CGG | + | chr1_3:11615216-11615235 | None:intergenic | 60.0% | |
| GCTGCTCTCTCACCCAGACT+AGG | + | chr1_3:11617923-11617942 | None:intergenic | 60.0% | |
| !! | GAAGACGGAAGGCATTCCGG+AGG | + | chr1_3:11618795-11618814 | None:intergenic | 60.0% |
| AGATCAGTCTGGAGAGGCGG+AGG | + | chr1_3:11619002-11619021 | None:intergenic | 60.0% | |
| ACATCAACCTGGAGAGGCGG+TGG | + | chr1_3:11619037-11619056 | None:intergenic | 60.0% | |
| AAGACGACCACCGCTCCACT+AGG | - | chr1_3:11619076-11619095 | Msa0104060:intron | 60.0% | |
| GAGCTGTTTGCACCCCCTCA+GGG | + | chr1_3:11619540-11619559 | None:intergenic | 60.0% | |
| TGAGCTGTTTGCACCCCCTC+AGG | + | chr1_3:11619541-11619560 | None:intergenic | 60.0% | |
| GAATTCGGAGGCTCGGCTCT+GGG | + | chr1_3:11619805-11619824 | None:intergenic | 60.0% | |
| AGAATTCGGAGGCTCGGCTC+TGG | + | chr1_3:11619806-11619825 | None:intergenic | 60.0% | |
| TTTGACCCTTGCCCCACGGT+GGG | - | chr1_3:11620263-11620282 | Msa0104060:intron | 60.0% | |
| AACAATTGGCGCCCACCGTG+GGG | + | chr1_3:11620277-11620296 | None:intergenic | 60.0% | |
| CAACAATTGGCGCCCACCGT+GGG | + | chr1_3:11620278-11620297 | None:intergenic | 60.0% | |
| ACAACAATTGGCGCCCACCG+TGG | + | chr1_3:11620279-11620298 | None:intergenic | 60.0% | |
| CGGAGAACCCACGAGAAGCA+TGG | + | chr1_3:11621059-11621078 | None:intergenic | 60.0% | |
| CGGCAAGCTGCGGTGATCCT+AGG | - | chr1_3:11614971-11614990 | Msa0104060:intron | 65.0% | |
| ! | AGTCGGTTCTCCGCCATGGG+TGG | - | chr1_3:11615203-11615222 | Msa0104060:intron | 65.0% |
| ! | GTCGGTTCTCCGCCATGGGT+GGG | - | chr1_3:11615204-11615223 | Msa0104060:intron | 65.0% |
| TCGGTTCTCCGCCATGGGTG+GGG | - | chr1_3:11615205-11615224 | Msa0104060:intron | 65.0% | |
| ! | ATGCGGGTGCTCTGGTGGTG+TGG | + | chr1_3:11619151-11619170 | None:intergenic | 65.0% |
| TGAGGATGCGGGTGCTCTGG+TGG | + | chr1_3:11619156-11619175 | None:intergenic | 65.0% | |
| TGTTTGCACCCCCTCAGGGC+CGG | + | chr1_3:11619536-11619555 | None:intergenic | 65.0% | |
| TTGAGGCCCATGGCTGAGGG+AGG | + | chr1_3:11619575-11619594 | None:intergenic | 65.0% | |
| CTTTGACCCTTGCCCCACGG+TGG | - | chr1_3:11620262-11620281 | Msa0104060:intron | 65.0% | |
| GCTGCTCTCTCCCCCAGACT+AGG | + | chr1_3:11620475-11620494 | None:intergenic | 65.0% | |
| CTCAACAGGCCCGGCCCTGA+GGG | - | chr1_3:11619523-11619542 | Msa0104060:intron | 70.0% | |
| TCAACAGGCCCGGCCCTGAG+GGG | - | chr1_3:11619524-11619543 | Msa0104060:intron | 70.0% | |
| GTTTGCACCCCCTCAGGGCC+GGG | + | chr1_3:11619535-11619554 | None:intergenic | 70.0% | |
| AGCTGGGCCTCCCTCAGCCA+TGG | - | chr1_3:11619565-11619584 | Msa0104060:intron | 70.0% | |
| GCTGGGCCTCCCTCAGCCAT+GGG | - | chr1_3:11619566-11619585 | Msa0104060:intron | 70.0% | |
| CCTCAGGGCCGGGCCTGTTG+AGG | + | chr1_3:11619525-11619544 | None:intergenic | 75.0% | |
| CCTCAACAGGCCCGGCCCTG+AGG | - | chr1_3:11619522-11619541 | Msa0104060:intron | 75.0% | |
| CAACAGGCCCGGCCCTGAGG+GGG | - | chr1_3:11619525-11619544 | Msa0104060:intron | 75.0% | |
| TGGCGCCCACCGTGGGGCAA+GGG | + | chr1_3:11620271-11620290 | None:intergenic | 75.0% | |
| TTGGCGCCCACCGTGGGGCA+AGG | + | chr1_3:11620272-11620291 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 11614796 | 11623224 | 11614796 | ID=Msa0104060;Name=Msa0104060 |
| chr1_3 | mRNA | 11614796 | 11623224 | 11614796 | ID=Msa0104060-mRNA-1;Parent=Msa0104060;Name=Msa0104060-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|0|0|7|0|308 |
| chr1_3 | exon | 11622979 | 11623224 | 11622979 | ID=Msa0104060-mRNA-1:exon:4771;Parent=Msa0104060-mRNA-1 |
| chr1_3 | exon | 11622787 | 11622972 | 11622787 | ID=Msa0104060-mRNA-1:exon:4770;Parent=Msa0104060-mRNA-1 |
| chr1_3 | exon | 11622523 | 11622756 | 11622523 | ID=Msa0104060-mRNA-1:exon:4769;Parent=Msa0104060-mRNA-1 |
| chr1_3 | exon | 11622396 | 11622480 | 11622396 | ID=Msa0104060-mRNA-1:exon:4768;Parent=Msa0104060-mRNA-1 |
| chr1_3 | exon | 11620801 | 11620833 | 11620801 | ID=Msa0104060-mRNA-1:exon:4767;Parent=Msa0104060-mRNA-1 |
| chr1_3 | exon | 11616202 | 11616225 | 11616202 | ID=Msa0104060-mRNA-1:exon:4766;Parent=Msa0104060-mRNA-1 |
| chr1_3 | exon | 11614796 | 11614911 | 11614796 | ID=Msa0104060-mRNA-1:exon:4765;Parent=Msa0104060-mRNA-1 |
| chr1_3 | CDS | 11622979 | 11623224 | 11622979 | ID=Msa0104060-mRNA-1:cds;Parent=Msa0104060-mRNA-1 |
| chr1_3 | CDS | 11622787 | 11622972 | 11622787 | ID=Msa0104060-mRNA-1:cds;Parent=Msa0104060-mRNA-1 |
| chr1_3 | CDS | 11622523 | 11622756 | 11622523 | ID=Msa0104060-mRNA-1:cds;Parent=Msa0104060-mRNA-1 |
| chr1_3 | CDS | 11622396 | 11622480 | 11622396 | ID=Msa0104060-mRNA-1:cds;Parent=Msa0104060-mRNA-1 |
| chr1_3 | CDS | 11620801 | 11620833 | 11620801 | ID=Msa0104060-mRNA-1:cds;Parent=Msa0104060-mRNA-1 |
| chr1_3 | CDS | 11616202 | 11616225 | 11616202 | ID=Msa0104060-mRNA-1:cds;Parent=Msa0104060-mRNA-1 |
| chr1_3 | CDS | 11614796 | 11614911 | 11614796 | ID=Msa0104060-mRNA-1:cds;Parent=Msa0104060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
