AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0105720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0105720 MtrunA17_Chr1g0161081 96.774 372 12 0 43 414 1 372 0.0 744
Msa0105720 MtrunA17_Chr1g0161111 88.942 416 40 2 5 414 16 431 0.0 726
Msa0105720 MtrunA17_Chr1g0161041 86.737 377 43 1 38 414 26 395 0.0 647
Msa0105720 MtrunA17_Chr7g0266651 51.275 353 165 4 63 410 8 358 4.64e-128 374
Msa0105720 MtrunA17_Chr7g0225881 45.983 361 188 2 59 412 8 368 8.36e-113 335
Msa0105720 MtrunA17_Chr6g0472861 46.774 372 183 6 56 414 5 374 3.51e-112 333
Msa0105720 MtrunA17_Chr1g0184241 44.068 354 190 5 63 413 18 366 9.80e-104 311
Msa0105720 MtrunA17_Chr2g0311831 43.099 355 195 4 64 413 18 370 2.46e-101 306
Msa0105720 MtrunA17_Chr1g0187821 45.028 362 191 4 59 413 9 369 2.02e-100 303
Msa0105720 MtrunA17_Chr2g0311701 41.019 373 210 3 48 411 2 373 7.40e-100 302
Msa0105720 MtrunA17_Chr2g0311761 42.697 356 196 5 64 413 18 371 5.97e-99 300
Msa0105720 MtrunA17_Chr8g0336761 42.286 350 191 4 70 413 19 363 9.08e-99 299
Msa0105720 MtrunA17_Chr8g0336851 39.503 362 207 5 59 413 7 363 1.39e-98 298
Msa0105720 MtrunA17_Chr8g0354261 40.720 361 200 5 63 413 17 373 8.51e-97 294
Msa0105720 MtrunA17_Chr1g0187831 43.243 370 191 7 59 414 10 374 9.46e-97 295
Msa0105720 MtrunA17_Chr8g0336751 41.854 356 200 4 63 413 43 396 1.14e-96 295
Msa0105720 MtrunA17_Chr8g0336631 41.595 351 193 5 70 413 19 364 1.36e-96 293
Msa0105720 MtrunA17_Chr8g0348081 41.143 350 195 4 70 413 19 363 1.44e-96 293
Msa0105720 MtrunA17_Chr8g0336781 41.026 351 195 5 70 413 54 399 1.05e-95 292
Msa0105720 MtrunA17_Chr1g0187811 42.547 369 197 6 59 413 125 492 1.46e-95 295
Msa0105720 MtrunA17_Chr8g0354241 39.612 361 204 5 63 413 17 373 1.53e-94 288
Msa0105720 MtrunA17_Chr2g0311861 42.254 355 178 5 64 413 14 346 3.66e-94 286
Msa0105720 MtrunA17_Chr8g0336861 40.341 352 197 6 70 413 19 365 7.57e-94 286
Msa0105720 MtrunA17_Chr7g0235951 41.360 353 196 4 63 407 17 366 1.82e-93 285
Msa0105720 MtrunA17_Chr2g0311681 40.110 364 208 3 57 411 5 367 5.76e-93 284
Msa0105720 MtrunA17_Chr2g0311691 40.385 364 207 3 57 411 5 367 1.54e-92 283
Msa0105720 MtrunA17_Chr2g0311711 41.787 347 195 3 59 399 11 356 1.62e-92 283
Msa0105720 MtrunA17_Chr2g0311921 39.326 356 208 5 64 413 4 357 1.03e-91 280
Msa0105720 MtrunA17_Chr1g0167951 42.577 357 191 6 64 413 5 354 1.54e-90 277
Msa0105720 MtrunA17_Chr4g0055591 40.988 344 196 4 69 408 15 355 9.67e-90 276
Msa0105720 MtrunA17_Chr1g0167911 41.880 351 191 6 64 407 5 349 1.03e-89 275
Msa0105720 MtrunA17_Chr1g0167961 41.714 350 194 6 64 407 20 365 6.36e-89 274
Msa0105720 MtrunA17_Chr4g0066121 40.346 347 194 6 56 394 4 345 8.88e-89 273
Msa0105720 MtrunA17_Chr2g0311741 40.000 325 191 2 90 411 2 325 4.43e-88 270
Msa0105720 MtrunA17_Chr8g0364471 38.095 357 206 5 59 405 13 364 4.93e-88 271
Msa0105720 MtrunA17_Chr7g0247991 43.314 344 184 5 63 398 17 357 7.28e-88 271
Msa0105720 MtrunA17_Chr7g0236011 41.061 358 198 6 59 407 13 366 1.18e-85 265
Msa0105720 MtrunA17_Chr1g0161101 87.349 166 12 1 210 375 346 502 1.23e-85 270
Msa0105720 MtrunA17_Chr1g0161101 58.911 202 42 4 6 207 49 209 9.57e-58 197
Msa0105720 MtrunA17_Chr8g0335411 40.793 353 198 5 63 407 17 366 2.51e-83 259
Msa0105720 MtrunA17_Chr1g0167931 38.968 349 166 7 64 407 5 311 6.65e-76 238
Msa0105720 MtrunA17_Chr4g0066991 38.440 359 190 7 63 413 17 352 9.34e-76 239
Msa0105720 MtrunA17_Chr7g0235981 37.815 357 183 8 63 413 3 326 3.59e-73 232
Msa0105720 MtrunA17_Chr4g0011311 39.051 274 162 2 63 333 17 288 5.31e-68 218
Msa0105720 MtrunA17_Chr3g0128001 36.095 338 204 7 82 413 5 336 1.78e-62 204
Msa0105720 MtrunA17_Chr2g0311631 34.582 347 211 7 77 413 20 360 7.34e-60 198
Msa0105720 MtrunA17_Chr8g0362741 37.818 275 149 4 63 333 17 273 2.96e-59 194
Msa0105720 MtrunA17_Chr7g0242551 36.607 336 193 9 79 399 15 345 4.47e-59 196
Msa0105720 MtrunA17_Chr8g0345831 32.934 334 215 6 85 413 13 342 6.45e-58 193
Msa0105720 MtrunA17_Chr3g0113641 35.000 340 206 8 66 394 2 337 3.01e-57 191
Msa0105720 MtrunA17_Chr3g0093741 35.260 346 207 10 77 413 16 353 3.44e-57 191
Msa0105720 MtrunA17_Chr4g0006371 35.127 353 202 8 79 407 14 363 1.79e-56 190
Msa0105720 MtrunA17_Chr3g0093751 34.971 346 208 10 77 413 16 353 3.36e-56 189
Msa0105720 MtrunA17_Chr5g0421101 32.362 343 216 7 79 413 13 347 7.75e-56 187
Msa0105720 MtrunA17_Chr3g0093761 34.971 346 207 11 77 413 16 352 5.83e-55 185
Msa0105720 MtrunA17_Chr5g0423191 33.735 332 204 8 90 413 24 347 3.77e-54 183
Msa0105720 MtrunA17_Chr5g0437181 35.866 329 192 9 79 394 14 336 6.31e-54 183
Msa0105720 MtrunA17_Chr1g0184121 34.756 328 199 7 85 404 9 329 9.94e-54 182
Msa0105720 MtrunA17_Chr5g0421041 32.565 347 210 8 78 413 12 345 1.05e-53 182
Msa0105720 MtrunA17_Chr5g0423251 33.434 332 205 7 90 413 24 347 1.12e-53 182
Msa0105720 MtrunA17_Chr1g0184111 34.146 328 201 7 85 404 9 329 2.29e-53 181
Msa0105720 MtrunA17_Chr5g0420901 31.487 343 219 8 79 413 12 346 1.99e-52 179
Msa0105720 MtrunA17_Chr5g0421011 32.849 344 215 8 78 413 12 347 2.26e-52 179
Msa0105720 MtrunA17_Chr1g0179801 33.721 344 213 8 78 408 26 367 1.13e-51 177
Msa0105720 MtrunA17_Chr8g0375571 32.081 346 213 9 78 410 10 346 1.76e-51 176
Msa0105720 MtrunA17_Chr5g0423221 31.085 341 214 9 78 407 36 366 1.85e-51 177
Msa0105720 MtrunA17_Chr7g0220001 36.610 295 171 8 115 401 41 327 6.58e-51 174
Msa0105720 MtrunA17_Chr7g0265351 35.294 306 183 7 115 413 39 336 7.09e-51 174
Msa0105720 MtrunA17_Chr3g0109041 33.041 342 208 10 79 406 10 344 7.52e-51 174
Msa0105720 MtrunA17_Chr5g0423201 31.412 347 217 9 78 413 12 348 9.51e-51 174
Msa0105720 MtrunA17_Chr5g0412651 36.120 299 177 7 115 402 38 333 9.72e-51 174
Msa0105720 MtrunA17_Chr5g0421091 30.523 344 222 8 79 413 11 346 1.09e-50 174
Msa0105720 MtrunA17_Chr6g0455481 35.473 296 174 9 115 401 42 329 1.20e-50 174
Msa0105720 MtrunA17_Chr5g0420941 31.105 344 221 8 78 413 10 345 1.42e-50 174
Msa0105720 MtrunA17_Chr8g0336831 37.991 229 133 3 70 293 19 243 1.00e-49 169
Msa0105720 MtrunA17_Chr1g0184161 32.317 328 206 8 85 404 10 329 1.03e-49 171
Msa0105720 MtrunA17_Chr7g0220011 34.969 326 190 10 89 404 15 328 1.26e-49 171
Msa0105720 MtrunA17_Chr8g0365241 30.702 342 226 7 78 413 22 358 1.45e-49 171
Msa0105720 MtrunA17_Chr5g0420981 30.725 345 223 8 78 413 17 354 6.44e-49 169
Msa0105720 MtrunA17_Chr5g0423211 30.659 349 216 9 79 413 13 349 8.51e-49 169
Msa0105720 MtrunA17_Chr1g0184151 31.498 327 210 8 85 404 10 329 3.60e-48 167
Msa0105720 MtrunA17_Chr8g0371931 33.000 300 188 7 114 404 38 333 6.54e-48 167
Msa0105720 MtrunA17_Chr1g0184101 34.347 329 199 10 85 404 9 329 7.92e-48 166
Msa0105720 MtrunA17_Chr8g0375671 33.016 315 193 8 111 413 48 356 1.17e-47 166
Msa0105720 MtrunA17_Chr2g0314381 29.706 340 221 9 84 413 48 379 1.33e-47 167
Msa0105720 MtrunA17_Chr5g0420951 30.725 345 229 7 75 413 14 354 2.48e-47 166
Msa0105720 MtrunA17_Chr2g0314391 30.347 346 223 9 78 413 35 372 6.23e-47 165
Msa0105720 MtrunA17_Chr8g0336801 46.154 156 81 2 260 413 1 155 7.24e-47 158
Msa0105720 MtrunA17_Chr7g0265221 30.833 360 218 9 74 408 21 374 8.09e-47 165
Msa0105720 MtrunA17_Chr8g0371921 33.000 300 188 7 114 404 38 333 6.12e-46 162
Msa0105720 MtrunA17_Chr4g0045441 32.609 322 186 7 115 410 26 342 1.65e-45 160
Msa0105720 MtrunA17_Chr7g0239111 32.450 302 196 7 114 410 54 352 1.92e-45 160
Msa0105720 MtrunA17_Chr3g0126741 31.622 370 216 13 45 398 2 350 2.40e-45 160
Msa0105720 MtrunA17_Chr5g0412681 34.130 293 177 7 115 399 33 317 3.38e-45 159
Msa0105720 MtrunA17_Chr4g0045451 32.039 309 179 7 115 397 26 329 4.26e-45 159
Msa0105720 MtrunA17_Chr5g0412671 35.135 296 178 7 115 399 38 330 6.97e-45 159
Msa0105720 MtrunA17_Chr5g0398291 31.792 346 216 8 79 406 8 351 4.70e-44 157
Msa0105720 MtrunA17_Chr7g0239101 30.820 305 197 6 114 410 54 352 8.11e-44 156
Msa0105720 MtrunA17_Chr8g0375601 29.714 350 222 10 79 413 11 351 8.53e-44 156
Msa0105720 MtrunA17_Chr5g0405411 31.399 293 188 7 114 397 38 326 1.14e-43 155
Msa0105720 MtrunA17_Chr1g0162351 32.194 351 197 12 94 411 51 393 1.75e-43 156
Msa0105720 MtrunA17_Chr1g0162361 34.056 323 180 10 114 411 26 340 1.83e-43 155
Msa0105720 MtrunA17_Chr7g0250511 30.218 321 212 8 82 395 17 332 8.15e-43 153
Msa0105720 MtrunA17_Chr8g0375701 31.105 344 221 9 74 407 11 348 8.82e-43 153
Msa0105720 MtrunA17_Chr8g0336871 43.103 174 90 3 236 407 1 167 8.83e-43 148
Msa0105720 MtrunA17_Chr5g0426891 31.169 308 198 7 115 413 39 341 2.85e-42 152
Msa0105720 MtrunA17_Chr7g0239821 30.164 305 199 8 114 410 63 361 3.92e-42 152
Msa0105720 MtrunA17_Chr2g0314401 30.645 310 199 8 114 413 50 353 4.55e-42 151
Msa0105720 MtrunA17_Chr3g0102041 31.667 300 192 7 114 404 38 333 5.96e-42 151
Msa0105720 MtrunA17_Chr4g0045411 31.624 351 196 10 92 411 10 347 2.06e-41 149
Msa0105720 MtrunA17_Chr4g0045431 33.129 326 179 8 115 410 26 342 2.84e-41 149
Msa0105720 MtrunA17_Chr1g0162321 31.624 351 199 12 94 411 51 393 3.30e-41 150
Msa0105720 MtrunA17_Chr4g0045471 30.723 332 193 10 94 397 8 330 4.35e-41 149
Msa0105720 MtrunA17_Chr7g0239121 29.450 309 203 7 114 413 50 352 8.78e-41 148
Msa0105720 MtrunA17_Chr6g0474391 30.267 337 202 10 89 403 42 367 2.48e-40 147
Msa0105720 MtrunA17_Chr1g0204181 30.814 344 203 12 90 411 38 368 5.72e-39 144
Msa0105720 MtrunA17_Chr1g0191201 31.871 342 205 12 88 411 31 362 1.04e-38 143
Msa0105720 MtrunA17_Chr2g0296371 27.688 372 237 9 55 413 3 355 1.16e-38 142
Msa0105720 MtrunA17_Chr1g0162191 31.373 306 192 9 113 407 45 343 1.93e-38 142
Msa0105720 MtrunA17_Chr5g0420721 38.071 197 115 5 220 413 57 249 2.33e-38 139
Msa0105720 MtrunA17_Chr2g0289341 30.233 301 190 8 116 406 5 295 4.31e-38 140
Msa0105720 MtrunA17_Chr8g0375681 32.234 273 177 5 146 413 15 284 8.73e-38 138
Msa0105720 MtrunA17_Chr8g0370711 32.759 290 185 7 104 387 44 329 8.77e-38 140
Msa0105720 MtrunA17_Chr5g0439011 31.081 296 180 10 116 398 6 290 2.35e-37 138
Msa0105720 MtrunA17_Chr8g0351101 29.396 381 225 12 55 413 6 364 2.63e-37 139
Msa0105720 MtrunA17_Chr3g0121141 30.667 300 190 10 115 406 4 293 2.99e-37 137
Msa0105720 MtrunA17_Chr2g0332191 30.844 308 192 8 115 409 52 351 5.74e-37 138
Msa0105720 MtrunA17_Chr2g0319491 29.938 324 207 6 87 405 8 316 4.00e-36 135
Msa0105720 MtrunA17_Chr3g0145171 31.333 300 193 8 115 406 52 346 8.06e-36 134
Msa0105720 MtrunA17_Chr3g0130391 31.214 346 205 11 89 413 44 377 1.63e-35 134
Msa0105720 MtrunA17_Chr4g0045461 31.494 308 179 6 115 396 26 327 2.36e-35 134
Msa0105720 MtrunA17_Chr7g0239071 29.078 282 186 6 134 407 19 294 2.93e-35 132
Msa0105720 MtrunA17_Chr8g0370721 29.874 318 207 9 104 413 44 353 2.87e-34 130
Msa0105720 MtrunA17_Chr5g0424201 30.745 322 195 9 89 395 19 327 3.90e-34 129
Msa0105720 MtrunA17_Chr3g0114861 32.024 331 209 9 79 401 6 328 8.57e-34 129
Msa0105720 MtrunA17_Chr4g0050031 28.902 346 230 12 77 410 21 362 2.27e-33 128
Msa0105720 MtrunA17_Chr3g0125201 29.904 311 178 12 115 403 3 295 2.81e-33 127
Msa0105720 MtrunA17_Chr7g0239091 27.333 300 204 6 114 410 159 447 5.80e-33 129
Msa0105720 MtrunA17_Chr3g0125421 30.612 343 204 11 90 411 16 345 6.06e-33 127
Msa0105720 MtrunA17_Chr4g0064781 32.155 283 175 8 115 388 50 324 6.64e-33 127
Msa0105720 MtrunA17_Chr3g0145181 29.123 285 186 8 115 387 49 329 1.24e-32 126
Msa0105720 MtrunA17_Chr8g0336791 36.313 179 105 3 70 243 19 193 1.78e-32 121
Msa0105720 MtrunA17_Chr7g0232161 30.142 282 172 6 78 345 24 294 2.19e-32 124
Msa0105720 MtrunA17_Chr3g0126761 39.153 189 109 5 223 408 42 227 2.30e-32 122
Msa0105720 MtrunA17_Chr5g0424211 30.592 304 197 7 89 383 17 315 2.66e-32 124
Msa0105720 MtrunA17_Chr3g0092531 32.215 298 174 10 112 394 3 287 7.66e-32 123
Msa0105720 MtrunA17_Chr8g0364161 36.842 171 89 3 63 223 17 178 2.05e-31 118
Msa0105720 MtrunA17_Chr5g0420881 37.500 144 87 3 271 413 2 143 2.53e-31 117
Msa0105720 MtrunA17_Chr3g0145201 28.975 283 189 7 115 387 684 964 5.05e-30 122
Msa0105720 MtrunA17_Chr8g0364171 46.364 110 59 0 224 333 17 126 5.89e-30 113
Msa0105720 MtrunA17_Chr3g0087031 26.452 310 207 11 106 404 52 351 7.07e-30 118
Msa0105720 MtrunA17_Chr1g0168001 37.278 169 98 4 64 225 5 172 1.46e-29 112
Msa0105720 MtrunA17_Chr4g0037611 36.957 184 104 4 235 414 1 176 1.62e-29 113
Msa0105720 MtrunA17_Chr4g0068891 28.254 315 205 9 110 413 15 319 6.56e-29 115
Msa0105720 MtrunA17_Chr7g0235991 38.732 142 84 1 116 254 22 163 2.05e-28 110
Msa0105720 MtrunA17_Chr8g0384461 26.023 342 223 8 74 395 6 337 4.31e-28 114
Msa0105720 MtrunA17_Chr5g0394071 38.323 167 95 2 228 394 5 163 4.88e-28 109
Msa0105720 MtrunA17_Chr1g0167921 44.828 116 64 0 228 343 52 167 7.80e-28 108
Msa0105720 MtrunA17_Chr8g0384481 27.604 384 236 13 48 411 4 365 1.89e-27 112
Msa0105720 MtrunA17_Chr7g0233661 46.721 122 57 2 273 394 24 137 2.21e-27 106
Msa0105720 MtrunA17_Chr8g0358941 28.076 317 201 10 114 413 26 332 1.07e-26 109
Msa0105720 MtrunA17_Chr2g0285931 27.760 317 195 12 115 411 28 330 1.71e-26 108
Msa0105720 MtrunA17_Chr2g0314371 25.723 311 190 9 84 362 23 324 2.00e-25 105
Msa0105720 MtrunA17_Chr2g0313111 29.393 313 191 14 115 413 28 324 3.42e-25 105
Msa0105720 MtrunA17_Chr6g0488511 30.072 276 168 11 115 377 3 266 3.47e-25 104
Msa0105720 MtrunA17_Chr1g0194321 26.625 323 199 10 115 411 20 330 1.49e-24 103
Msa0105720 MtrunA17_Chr4g0075471 39.535 129 73 4 273 398 32 158 8.47e-24 97.1
Msa0105720 MtrunA17_Chr6g0486831 27.687 307 192 8 118 399 24 325 1.71e-23 100
Msa0105720 MtrunA17_Chr3g0105281 26.235 324 196 11 97 410 24 314 2.95e-23 99.8
Msa0105720 MtrunA17_Chr4g0052251 29.841 315 190 12 115 411 29 330 3.77e-23 99.4
Msa0105720 MtrunA17_Chr1g0148771 29.961 257 164 10 115 364 63 310 4.18e-23 99.8
Msa0105720 MtrunA17_Chr8g0389941 27.914 326 188 14 112 404 31 342 4.72e-22 96.7
Msa0105720 MtrunA17_Chr8g0348951 26.910 301 193 11 110 395 5 293 7.73e-22 95.5
Msa0105720 MtrunA17_Chr4g0055871 27.239 268 167 10 117 364 6 265 1.15e-21 94.7
Msa0105720 MtrunA17_Chr2g0311751 34.884 129 81 1 100 225 12 140 1.20e-21 91.3
Msa0105720 MtrunA17_Chr3g0092581 35.802 162 95 6 237 394 3 159 1.44e-21 91.7
Msa0105720 MtrunA17_Chr3g0114871 29.804 255 165 7 88 333 16 265 3.55e-21 92.8
Msa0105720 MtrunA17_Chr1g0170631 29.897 194 130 5 223 413 1 191 4.83e-21 90.5
Msa0105720 MtrunA17_Chr4g0055911 26.394 269 172 9 115 364 9 270 7.55e-21 92.8
Msa0105720 MtrunA17_Chr7g0247741 27.000 300 189 9 112 395 8 293 6.44e-20 90.1
Msa0105720 MtrunA17_Chr1g0158011 33.918 171 109 4 226 393 71 240 5.91e-19 86.3
Msa0105720 MtrunA17_Chr2g0311611 50.000 70 28 1 271 333 2 71 2.86e-18 78.6
Msa0105720 MtrunA17_Chr4g0064771 32.584 178 111 5 213 388 19 189 7.44e-18 81.6
Msa0105720 MtrunA17_Chr5g0407731 26.148 283 196 9 115 394 33 305 3.13e-17 82.4
Msa0105720 MtrunA17_Chr1g0158021 28.378 222 141 8 114 325 48 261 1.04e-16 79.7
Msa0105720 MtrunA17_Chr5g0407781 27.653 311 185 15 115 408 5 292 1.45e-16 79.7
Msa0105720 MtrunA17_Chr2g0293931 29.508 183 117 6 242 414 24 204 1.95e-16 77.8
Msa0105720 MtrunA17_Chr8g0336841 44.578 83 43 2 333 413 9 90 4.87e-16 73.2
Msa0105720 MtrunA17_Chr4g0004071 24.333 300 212 9 110 402 9 300 2.19e-15 76.6
Msa0105720 MtrunA17_Chr4g0004061 23.826 298 216 7 113 402 7 301 2.77e-15 76.3
Msa0105720 MtrunA17_Chr2g0311641 32.593 135 84 4 77 208 20 150 3.44e-15 73.2
Msa0105720 MtrunA17_Chr2g0319521 33.028 109 73 0 225 333 16 124 7.93e-15 71.2
Msa0105720 MtrunA17_Chr8g0375581 41.573 89 45 3 246 330 1 86 1.32e-14 68.9
Msa0105720 MtrunA17_Chr5g0420891 31.884 138 85 4 79 213 12 143 1.64e-13 68.2
Msa0105720 MtrunA17_Chr2g0311621 35.354 99 60 2 77 174 20 115 6.71e-13 65.1
Msa0105720 MtrunA17_Chr4g0053251 38.168 131 70 5 283 411 199 320 1.37e-12 68.2
Msa0105720 MtrunA17_Chr7g0219991 42.045 88 49 2 242 328 265 351 3.75e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0105720 AT1G03410.2 45.404 359 181 6 64 411 5 359 1.98e-106 318
Msa0105720 AT1G03410.1 45.404 359 181 6 64 411 42 396 5.32e-106 319
Msa0105720 AT1G06650.2 44.904 363 188 5 61 413 8 368 3.77e-105 316
Msa0105720 AT1G03400.1 45.714 350 183 2 64 411 5 349 1.52e-104 313
Msa0105720 AT1G06620.1 45.070 355 176 6 64 407 12 358 1.56e-103 311
Msa0105720 AT2G30840.1 42.297 357 200 2 63 413 5 361 5.15e-103 310
Msa0105720 AT1G04350.1 42.373 354 201 2 63 413 6 359 1.43e-102 309
Msa0105720 AT5G59530.1 45.304 362 186 7 59 411 4 362 1.66e-102 309
Msa0105720 AT1G06640.1 44.475 362 189 5 56 407 3 362 3.98e-100 303
Msa0105720 AT2G30830.1 41.573 356 200 3 63 413 5 357 6.79e-99 299
Msa0105720 AT2G30840.3 42.297 357 194 3 63 413 5 355 8.72e-99 299
Msa0105720 AT1G03400.2 42.328 378 183 3 64 411 5 377 2.42e-98 298
Msa0105720 AT5G59540.1 41.341 358 202 5 57 407 3 359 6.49e-98 297
Msa0105720 AT3G61400.1 41.644 365 197 6 56 408 5 365 8.23e-97 294
Msa0105720 AT1G06645.1 42.582 364 194 5 60 413 20 378 6.66e-93 285
Msa0105720 AT1G04380.1 40.854 328 184 4 90 413 23 344 1.62e-89 275
Msa0105720 AT2G25450.1 40.111 359 202 5 63 413 5 358 7.96e-89 273
Msa0105720 AT5G43440.1 40.616 357 202 7 65 413 10 364 5.39e-88 271
Msa0105720 AT5G43450.1 40.110 364 206 7 57 412 2 361 1.90e-85 265
Msa0105720 AT1G06620.2 47.080 274 137 3 64 332 12 282 3.82e-84 259
Msa0105720 AT2G30840.2 44.727 275 147 1 63 332 5 279 3.28e-82 254
Msa0105720 AT1G06650.1 45.907 281 142 4 61 333 8 286 1.02e-81 254
Msa0105720 AT1G06640.2 45.085 295 152 4 56 342 3 295 6.13e-81 252
Msa0105720 AT1G06640.3 45.455 286 146 4 56 333 3 286 1.52e-79 247
Msa0105720 AT5G59540.2 40.426 282 163 3 57 333 3 284 7.46e-75 235
Msa0105720 AT3G61400.2 42.014 288 153 5 56 333 5 288 4.01e-74 233
Msa0105720 AT3G13610.1 38.484 343 198 8 77 413 25 360 1.07e-71 229
Msa0105720 AT1G55290.1 39.003 341 196 10 77 411 24 358 5.39e-68 220
Msa0105720 AT1G04380.2 40.650 246 143 1 90 335 23 265 2.19e-67 215
Msa0105720 AT5G43450.2 40.860 279 161 3 57 332 2 279 1.93e-66 213
Msa0105720 AT5G43440.2 40.876 274 155 5 65 332 10 282 2.64e-66 213
Msa0105720 AT3G12900.1 37.356 348 195 11 77 413 20 355 7.30e-62 204
Msa0105720 AT4G10490.1 34.118 340 209 7 83 413 11 344 1.59e-58 195
Msa0105720 AT5G24530.1 35.191 341 205 9 82 412 5 339 2.43e-58 194
Msa0105720 AT2G38240.1 34.421 337 209 7 79 407 12 344 4.20e-57 191
Msa0105720 AT4G10500.1 34.639 332 203 7 90 413 20 345 2.44e-56 189
Msa0105720 AT3G11180.1 36.336 333 193 9 79 399 56 381 3.13e-56 190
Msa0105720 AT3G11180.2 36.336 333 193 9 79 399 56 381 3.43e-56 190
Msa0105720 AT3G55970.1 34.139 331 200 10 79 394 14 341 9.67e-54 183
Msa0105720 AT5G05600.1 32.958 355 215 9 68 407 16 362 2.22e-52 179
Msa0105720 AT2G36690.2 31.034 348 229 6 70 408 12 357 5.44e-52 178
Msa0105720 AT2G36690.1 31.034 348 229 6 70 408 12 357 5.44e-52 178
Msa0105720 AT1G17010.1 30.792 341 219 8 84 413 23 357 1.71e-50 174
Msa0105720 AT4G25300.1 30.769 338 216 10 87 413 25 355 1.75e-49 171
Msa0105720 AT5G12270.1 33.235 340 212 10 76 406 18 351 3.50e-48 168
Msa0105720 AT3G51240.1 33.667 300 186 7 114 404 37 332 2.30e-47 166
Msa0105720 AT3G19000.1 35.227 352 185 12 94 411 8 350 1.69e-46 163
Msa0105720 AT1G17020.1 31.563 339 213 10 87 413 26 357 2.05e-46 163
Msa0105720 AT1G78550.1 28.446 341 225 9 84 413 23 355 2.76e-46 163
Msa0105720 AT3G60290.1 30.678 339 226 7 82 414 19 354 2.36e-44 158
Msa0105720 AT4G25310.1 31.507 292 182 8 131 413 70 352 5.57e-44 157
Msa0105720 AT5G08640.2 32.899 307 177 9 111 401 39 332 1.15e-42 153
Msa0105720 AT5G08640.1 32.899 307 177 9 111 401 39 332 1.15e-42 153
Msa0105720 AT4G25420.1 30.625 320 201 7 90 395 40 352 6.35e-42 152
Msa0105720 AT4G16330.2 33.663 303 177 10 115 406 67 356 1.30e-41 150
Msa0105720 AT1G05010.1 32.721 272 165 7 115 377 4 266 2.55e-41 149
Msa0105720 AT3G21420.1 32.476 311 196 7 114 413 54 361 8.46e-41 149
Msa0105720 AT4G22880.1 32.378 349 202 13 79 402 7 346 1.00e-40 148
Msa0105720 AT4G22880.2 32.378 349 202 13 79 402 7 346 1.00e-40 148
Msa0105720 AT4G22880.3 32.378 349 202 13 79 402 7 346 1.00e-40 148
Msa0105720 AT1G78550.2 29.286 280 182 7 143 413 5 277 1.72e-40 145
Msa0105720 AT3G19010.1 31.672 341 207 9 94 411 8 345 4.37e-40 146
Msa0105720 AT3G19010.4 31.672 341 207 9 94 411 8 345 4.37e-40 146
Msa0105720 AT2G44800.1 27.576 330 232 5 72 396 9 336 2.13e-38 142
Msa0105720 AT3G51240.2 35.965 228 137 5 183 404 24 248 1.14e-37 138
Msa0105720 AT5G20400.1 29.882 338 221 10 79 406 9 340 1.65e-37 139
Msa0105720 AT5G07200.1 30.952 336 199 10 82 395 29 353 2.88e-37 139
Msa0105720 AT3G55970.2 32.222 270 167 9 79 333 14 282 5.41e-37 137
Msa0105720 AT5G05600.2 31.071 280 174 7 68 333 16 290 1.42e-36 135
Msa0105720 AT5G51810.1 29.653 317 204 6 90 395 42 350 7.49e-36 135
Msa0105720 AT4G21200.1 31.834 289 173 10 114 394 41 313 1.57e-35 134
Msa0105720 AT3G19000.2 35.472 265 143 9 94 333 8 269 2.21e-35 132
Msa0105720 AT1G15550.1 31.410 312 183 12 105 395 37 338 2.41e-35 134
Msa0105720 AT3G19010.3 30.887 327 198 12 94 411 8 315 3.05e-35 132
Msa0105720 AT4G25300.2 36.757 185 113 4 231 413 79 261 1.12e-34 129
Msa0105720 AT1G60980.1 28.324 346 216 10 90 413 36 371 4.13e-34 131
Msa0105720 AT5G07480.1 28.440 327 213 9 90 403 24 342 1.87e-33 129
Msa0105720 AT4G16330.1 34.928 209 126 4 202 406 48 250 1.95e-33 126
Msa0105720 AT5G63590.1 30.847 295 179 8 114 391 13 299 2.28e-33 127
Msa0105720 AT1G62380.1 28.475 295 188 9 114 398 6 287 1.33e-32 125
Msa0105720 AT1G80330.1 29.154 319 200 9 109 410 43 352 2.46e-32 125
Msa0105720 AT5G20550.1 29.907 321 208 11 79 387 9 324 4.89e-32 124
Msa0105720 AT1G12010.1 29.153 295 186 10 114 398 6 287 5.62e-32 124
Msa0105720 AT1G78440.1 30.275 327 195 11 106 414 11 322 2.41e-31 122
Msa0105720 AT1G77330.1 31.104 299 179 12 115 398 3 289 2.83e-31 121
Msa0105720 AT4G25310.2 28.179 291 165 8 131 413 70 324 4.58e-31 121
Msa0105720 AT5G63600.1 28.082 292 191 7 114 397 32 312 1.19e-30 120
Msa0105720 AT4G25420.2 28.958 259 165 5 89 333 39 292 1.31e-30 119
Msa0105720 AT5G63600.2 27.986 293 191 8 114 397 32 313 7.82e-30 118
Msa0105720 AT1G44090.1 30.380 316 197 11 114 411 62 372 1.31e-29 119
Msa0105720 AT1G49390.1 27.434 339 228 11 79 406 9 340 2.04e-29 117
Msa0105720 AT1G50960.1 28.671 286 189 6 114 394 39 314 2.81e-29 117
Msa0105720 AT5G51810.2 29.070 258 166 4 90 336 42 293 2.76e-28 113
Msa0105720 AT5G54000.2 29.965 287 189 7 110 387 41 324 9.98e-28 112
Msa0105720 AT2G19590.1 30.634 284 172 11 114 387 10 278 1.31e-27 111
Msa0105720 AT1G47990.1 30.556 324 178 13 114 411 14 316 1.33e-27 112
Msa0105720 AT1G30040.1 27.077 325 202 10 111 414 22 332 6.27e-27 110
Msa0105720 AT3G19010.2 30.888 259 160 6 94 334 8 265 1.00e-26 108
Msa0105720 AT4G21690.1 30.154 325 188 14 111 411 38 347 1.07e-26 110
Msa0105720 AT1G80340.1 26.646 319 213 9 87 395 24 331 1.17e-26 110
Msa0105720 AT2G34555.1 27.885 312 202 9 115 414 27 327 9.91e-25 104
Msa0105720 AT1G02400.1 27.500 320 203 12 111 413 20 327 3.51e-24 102
Msa0105720 AT5G63595.1 27.843 255 154 6 116 364 26 256 1.75e-22 97.1
Msa0105720 AT2G19590.2 30.830 253 151 10 144 387 26 263 1.82e-22 97.1
Msa0105720 AT5G43935.1 26.756 299 185 8 114 403 18 291 1.83e-22 97.1
Msa0105720 AT5G54000.1 28.745 247 167 6 147 387 1 244 2.71e-22 96.3
Msa0105720 AT4G23340.1 27.778 288 175 10 137 406 30 302 2.92e-22 97.1
Msa0105720 AT3G46500.5 27.362 307 193 9 115 400 17 314 3.09e-21 94.4
Msa0105720 AT1G49390.2 26.592 267 183 8 147 406 1 261 7.28e-21 92.0
Msa0105720 AT3G47190.1 25.000 300 183 8 114 394 31 307 8.55e-20 90.1
Msa0105720 AT5G07480.2 31.771 192 121 6 219 403 45 233 8.69e-20 88.6
Msa0105720 AT3G49620.1 28.049 328 181 10 115 398 34 350 1.24e-19 90.1
Msa0105720 AT5G63580.2 29.646 226 148 5 115 333 19 240 2.39e-19 87.0
Msa0105720 AT5G63580.1 30.043 233 149 7 115 340 19 244 2.53e-19 87.4
Msa0105720 AT1G35190.2 28.188 298 184 9 117 401 14 294 3.21e-19 88.2
Msa0105720 AT4G23340.2 36.923 130 78 4 278 406 58 184 5.33e-19 85.5
Msa0105720 AT1G14120.2 28.873 284 175 11 115 387 8 275 3.72e-18 85.1
Msa0105720 AT1G14120.1 28.873 284 175 11 115 387 8 275 3.72e-18 85.1
Msa0105720 AT1G14120.3 28.873 284 175 11 115 387 8 275 3.72e-18 85.1
Msa0105720 AT3G50210.4 29.496 278 164 8 115 361 8 284 4.12e-18 85.1
Msa0105720 AT3G50210.1 29.496 278 164 8 115 361 8 284 4.12e-18 85.1
Msa0105720 AT3G50210.3 29.496 278 164 8 115 361 8 284 4.12e-18 85.1
Msa0105720 AT3G49630.1 28.571 294 166 9 115 374 9 292 8.14e-18 84.3
Msa0105720 AT5G58660.1 25.633 316 174 10 115 394 34 324 1.04e-17 84.3
Msa0105720 AT3G46490.1 26.129 310 200 9 115 400 17 321 1.29e-17 84.0
Msa0105720 AT1G14130.1 27.869 305 194 10 115 408 9 298 1.49e-17 83.2
Msa0105720 AT3G49630.3 29.259 270 158 8 128 374 29 288 1.88e-17 83.2
Msa0105720 AT3G46500.7 27.306 271 168 8 115 364 17 279 3.33e-17 82.0
Msa0105720 AT1G35190.1 26.688 311 195 8 117 401 14 317 5.20e-17 82.0
Msa0105720 AT3G46490.2 25.753 299 189 9 115 387 17 308 1.77e-16 80.1
Msa0105720 AT1G52820.1 25.084 299 200 9 115 399 12 300 3.34e-14 73.6
Msa0105720 AT1G30040.2 25.820 244 148 8 111 333 22 253 4.99e-14 72.4
Msa0105720 AT4G16765.6 32.886 149 89 4 225 364 60 206 1.19e-13 70.9
Msa0105720 AT4G16765.1 32.886 149 89 4 225 364 60 206 1.19e-13 70.9
Msa0105720 AT4G16765.2 32.886 149 89 4 225 364 60 206 1.19e-13 70.9
Msa0105720 AT4G16765.3 31.638 177 109 5 225 392 60 233 1.33e-13 70.5
Msa0105720 AT4G22870.1 35.294 102 64 2 302 402 2 102 1.16e-12 64.7
Msa0105720 AT3G46500.4 32.787 122 74 3 284 400 60 178 4.37e-12 65.1
Msa0105720 AT3G50210.2 44.186 86 45 3 278 361 118 202 6.39e-12 65.9
Msa0105720 AT3G46500.10 32.787 122 74 3 284 400 122 240 1.36e-11 64.7
Msa0105720 AT3G46500.1 32.787 122 74 3 284 400 122 240 1.36e-11 64.7

Find 148 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGCTTATTTAAGTTATT+AGG 0.163665 1_3:+14346452 Msa0105720:three_prime_UTR
AGGTCGATTGTGGGAATTTC+TGG 0.203913 1_3:-14343418 None:intergenic
GAAACAAAATCCGGCGTAAA+AGG 0.209794 1_3:+14343301 Msa0105720:CDS
ATCTATAAAGCAGCGGTTTC+TGG 0.229034 1_3:+14346379 Msa0105720:three_prime_UTR
AATGTTTGTGTTTGGGGTTT+GGG 0.230749 1_3:-14343155 None:intergenic
GAATGTTTGTGTTTGGGGTT+TGG 0.236031 1_3:-14343156 None:intergenic
GGAAGGGAATGTTTGTGTTT+GGG 0.266555 1_3:-14343162 None:intergenic
CAACATTGGAGATTTATTTC+AGG 0.268048 1_3:+14345830 Msa0105720:CDS
AGCGGCACGGGAATGGTTTA+TGG 0.269928 1_3:-14343446 None:intergenic
AAGATCAACGTTCGAAATAT+AGG 0.279985 1_3:-14343641 None:intergenic
GGAAGTACATTGCTGAATAA+AGG 0.284600 1_3:+14346474 Msa0105720:three_prime_UTR
GGTGGTGAAGGGGTGGCTAT+TGG 0.286859 1_3:-14343220 None:intergenic
TCTCCCTATTACCCGGGTTT+AGG 0.289476 1_3:-14346213 None:intergenic
GGATCATATTGGTGGCTTAC+AGG 0.300374 1_3:+14345752 Msa0105720:CDS
CATGCTTATTTAAGTTATTA+GGG 0.301172 1_3:+14346453 Msa0105720:three_prime_UTR
GTGAGGTCAGATAGAGTTTC+GGG 0.306381 1_3:-14343373 None:intergenic
GGGAAGGGAATGTTTGTGTT+TGG 0.318330 1_3:-14343163 None:intergenic
TGTATATGTATGTATATATT+AGG 0.334162 1_3:+14346499 Msa0105720:three_prime_UTR
AGATTAGGCTGAGGGCAAAA+TGG 0.338207 1_3:-14345675 None:intergenic
CTCAATTCTCATGCAGATCC+TGG 0.339245 1_3:+14345708 Msa0105720:CDS
TGATTCTCAAGGAAGAAAAT+AGG 0.340335 1_3:-14343129 None:intergenic
TGAAGAAAGGCTCACAGAAT+TGG 0.350493 1_3:+14345614 Msa0105720:CDS
GAGACCCGTGGCTCGTTAGA+AGG 0.359180 1_3:-14346178 None:intergenic
GGAATCTCCTTCTCTTCCGC+TGG 0.367358 1_3:-14345495 None:intergenic
GACATTAATCCAACCATGTT+GGG 0.368631 1_3:-14345781 None:intergenic
ACGGTGGTTGGTGGTGGTGA+AGG 0.371074 1_3:-14343232 None:intergenic
CGGTGGTTGGTGGTGGTGAA+GGG 0.372563 1_3:-14343231 None:intergenic
TCATGTGCTCTACATTAATC+TGG 0.376634 1_3:+14346559 Msa0105720:three_prime_UTR
GGCATTGACAGTATTGTTGC+AGG 0.379466 1_3:+14345731 Msa0105720:CDS
CAAGCCTCTTGATGGAGCTT+TGG 0.380373 1_3:+14345803 Msa0105720:CDS
ATTAATGTCAAGCCTCTTGA+TGG 0.388054 1_3:+14345795 Msa0105720:CDS
CGTTCCGCTGCAAGTACGTT+TGG 0.389362 1_3:+14343484 Msa0105720:CDS
GAAGTACATTGCTGAATAAA+GGG 0.393963 1_3:+14346475 Msa0105720:three_prime_UTR
GATTGTGGGAATTTCTGGTT+GGG 0.395562 1_3:-14343413 None:intergenic
GAAGAAAGGCTCACAGAATT+GGG 0.402379 1_3:+14345615 Msa0105720:CDS
ATATTGGTGGCTTACAGGTT+AGG 0.411623 1_3:+14345757 Msa0105720:CDS
GGTAATAGGGAGAAGCTCTT+TGG 0.421313 1_3:+14346223 Msa0105720:CDS
TTTCCTAAACCCGGGTAATA+GGG 0.421959 1_3:+14346210 Msa0105720:CDS
GGTGGTTGGTGGTGGTGAAG+GGG 0.423936 1_3:-14343230 None:intergenic
TCCTTCTCTTCCGCTGGGAC+AGG 0.425236 1_3:-14345489 None:intergenic
AGGAGATTCCGGAGGTATGC+AGG 0.432250 1_3:+14345508 Msa0105720:CDS
TTCTTTAAGAAAGAGCTTGA+TGG 0.440915 1_3:+14346322 Msa0105720:CDS
GGTTGGTGGTGGTGAAGGGG+TGG 0.443177 1_3:-14343227 None:intergenic
AGCGGAAGAGAAGGAGATTC+CGG 0.446303 1_3:+14345497 Msa0105720:CDS
TGATAAATTTGTATATTATG+TGG 0.447007 1_3:-14346539 None:intergenic
GAAGGGAATGTTTGTGTTTG+GGG 0.453503 1_3:-14343161 None:intergenic
GGCTTAATACATACATGCTT+CGG 0.453608 1_3:-14343108 None:intergenic
TGTTTCGTCGAATTCTTTCA+CGG 0.454371 1_3:-14343284 None:intergenic
CTGGAGTGTGTCACGCCAGC+TGG 0.455503 1_3:-14343680 None:intergenic
AGTGAGGTCAGATAGAGTTT+CGG 0.456213 1_3:-14343374 None:intergenic
TACCGTAGGGAGATGGGAAC+TGG 0.456266 1_3:+14343613 Msa0105720:CDS
GTTATGAATTGAATTAATGA+TGG 0.458959 1_3:-14343184 None:intergenic
CGATTGTGGGAATTTCTGGT+TGG 0.466209 1_3:-14343414 None:intergenic
TTCTCTGCTGATGTTAGCTC+TGG 0.467059 1_3:-14346253 None:intergenic
ACCTTCTTCCTCTCGTCCGC+AGG 0.470158 1_3:-14343589 None:intergenic
GGTGATGAGACGGTGGTTGG+TGG 0.471586 1_3:-14343241 None:intergenic
TCGCTTCTAAAGCTGCCAGC+TGG 0.472617 1_3:+14343665 Msa0105720:CDS
CAGATAGAGTTTCGGGTGGA+TGG 0.477759 1_3:-14343366 None:intergenic
TCAACTCCGGCGCGACTCCA+TGG 0.478807 1_3:-14343525 None:intergenic
GATGAGACGGTGGTTGGTGG+TGG 0.480200 1_3:-14343238 None:intergenic
GAAGGTGTACCGTAGGGAGA+TGG 0.481378 1_3:+14343606 Msa0105720:CDS
GATTAGGCTGAGGGCAAAAT+GGG 0.486909 1_3:-14345674 None:intergenic
TCAATTCTCATGCAGATCCT+GGG 0.490704 1_3:+14345709 Msa0105720:CDS
CCGTGGCTCGTTAGAAGGAT+TGG 0.491190 1_3:-14346173 None:intergenic
ACCTCCTTCCTGCATACCTC+CGG 0.492923 1_3:-14345516 None:intergenic
ACCTGTCCCAGCGGAAGAGA+AGG 0.494521 1_3:+14345488 Msa0105720:CDS
CTGTTCAACGACAGCGGCAC+GGG 0.497276 1_3:-14343458 None:intergenic
GGAGCTTTGGTTATCAACAT+TGG 0.499778 1_3:+14345816 Msa0105720:CDS
GTATTGTTGCAGGATCATAT+TGG 0.500449 1_3:+14345741 Msa0105720:CDS
GTAATAGTAACTTTGTAAGA+TGG 0.504268 1_3:+14346417 Msa0105720:three_prime_UTR
GGCTTGTTGAGTGAAGGGTT+AGG 0.506041 1_3:+14345585 Msa0105720:CDS
GAGGGCAAAATGGGTAATAG+TGG 0.511066 1_3:-14345665 None:intergenic
CAGCTGGCGTGACACACTCC+AGG 0.512575 1_3:+14343681 Msa0105720:CDS
CAGAATTGGGTTTGTCGCAA+GGG 0.514313 1_3:+14345628 Msa0105720:CDS
TTGCTGGGCTTGTTGAGTGA+AGG 0.516325 1_3:+14345579 Msa0105720:CDS
TATGGCTGAGAGGTCGATTG+TGG 0.519394 1_3:-14343428 None:intergenic
AGAGGAAGAAGGTGTACCGT+AGG 0.520273 1_3:+14343599 Msa0105720:CDS
ACAGAATTGGGTTTGTCGCA+AGG 0.525999 1_3:+14345627 Msa0105720:CDS
ATCACACTTCGCGTCAACTC+CGG 0.529390 1_3:-14343538 None:intergenic
TGCTGGGCTTGTTGAGTGAA+GGG 0.531596 1_3:+14345580 Msa0105720:CDS
TGACATTAATCCAACCATGT+TGG 0.533450 1_3:-14345782 None:intergenic
AGGTTAGGTCCCAACATGGT+TGG 0.535641 1_3:+14345772 Msa0105720:CDS
GAGTTGACGCGAAGTGTGAT+TGG 0.538633 1_3:+14343541 Msa0105720:CDS
AAGAGCTTCTCCCTATTACC+CGG 0.538989 1_3:-14346220 None:intergenic
GAATCTCCTTCTCTTCCGCT+GGG 0.540070 1_3:-14345494 None:intergenic
GAATTGAATTAATGATGGGA+AGG 0.541649 1_3:-14343179 None:intergenic
AATTGAATTAATGATGGGAA+GGG 0.541969 1_3:-14343178 None:intergenic
CAACGACAGCGGCACGGGAA+TGG 0.544177 1_3:-14343453 None:intergenic
AAGGTGTACCGTAGGGAGAT+GGG 0.544203 1_3:+14343607 Msa0105720:CDS
ATGGCTGAGAGGTCGATTGT+GGG 0.548872 1_3:-14343427 None:intergenic
CGCTCAACGAATTTATGACA+AGG 0.549583 1_3:+14346299 Msa0105720:CDS
TTTGTCGCAAGGGAGGGTGA+TGG 0.551800 1_3:+14345638 Msa0105720:CDS
GTGAAATCTCTATAAAGAGC+TGG 0.556464 1_3:-14346277 None:intergenic
TTGTTGCAGGATCATATTGG+TGG 0.559461 1_3:+14345744 Msa0105720:CDS
GAATTCGACGAAACAAAATC+CGG 0.561248 1_3:+14343292 Msa0105720:CDS
CAGGAAGGAGGTGATGGAGT+GGG 0.561352 1_3:+14345527 Msa0105720:CDS
AATTGGGTTTGTCGCAAGGG+AGG 0.563814 1_3:+14345631 Msa0105720:CDS
CCAATCCTTCTAACGAGCCA+CGG 0.564324 1_3:+14346173 Msa0105720:CDS
GGTATGCAGGAAGGAGGTGA+TGG 0.565254 1_3:+14345521 Msa0105720:CDS
CAATCCTTCTAACGAGCCAC+GGG 0.566309 1_3:+14346174 Msa0105720:CDS
TTGAGTCCAACGGTAAGATT+AGG 0.566485 1_3:-14345690 None:intergenic
ATTGTGGGAATTTCTGGTTG+GGG 0.566748 1_3:-14343412 None:intergenic
GGTTAGGATTACGTGAAGAA+AGG 0.568337 1_3:+14345601 Msa0105720:CDS
ATTGGGTTTGTCGCAAGGGA+GGG 0.570147 1_3:+14345632 Msa0105720:CDS
GGTGGATGGATGAAGAATGA+TGG 0.573720 1_3:-14343352 None:intergenic
AACAATACTGTCAATGCCCC+AGG 0.574218 1_3:-14345726 None:intergenic
GGTGGTGATGAGACGGTGGT+TGG 0.574489 1_3:-14343244 None:intergenic
TTCTTTCAAGTGATCAACCA+TGG 0.576207 1_3:+14343508 Msa0105720:CDS
AGAGCTTCTCCCTATTACCC+GGG 0.579455 1_3:-14346219 None:intergenic
GCTGATGTTAGCTCTGGTAA+AGG 0.581133 1_3:-14346247 None:intergenic
TCGCAAGGGAGGGTGATGGT+TGG 0.589053 1_3:+14345642 Msa0105720:CDS
GAGGAAGAAGGTGTACCGTA+GGG 0.589131 1_3:+14343600 Msa0105720:CDS
CACCAGTTCCCATCTCCCTA+CGG 0.596077 1_3:-14343615 None:intergenic
TTATGAATTGAATTAATGAT+GGG 0.596728 1_3:-14343183 None:intergenic
ATGGATGAAGAATGATGGAA+TGG 0.596986 1_3:-14343347 None:intergenic
ATAACCAAAGCTCCATCAAG+AGG 0.600908 1_3:-14345807 None:intergenic
CCTCAGCCTAATCTTACCGT+TGG 0.602504 1_3:+14345684 Msa0105720:CDS
ATGAACAGCCTGCGGACGAG+AGG 0.602972 1_3:+14343581 Msa0105720:CDS
GCCTGCGGACGAGAGGAAGA+AGG 0.605646 1_3:+14343588 Msa0105720:CDS
GCTGTTCAACGACAGCGGCA+CGG 0.608041 1_3:-14343459 None:intergenic
GTCTCAGATAATTTCGAACG+AGG 0.609437 1_3:+14346120 Msa0105720:intron
GGATAAAGAAGTGGTGCGTG+TGG 0.614002 1_3:+14345548 Msa0105720:CDS
GCAGGAAGGAGGTGATGGAG+TGG 0.617612 1_3:+14345526 Msa0105720:CDS
TTGTGGGAATTTCTGGTTGG+GGG 0.621606 1_3:-14343411 None:intergenic
CAACGGTAAGATTAGGCTGA+GGG 0.624561 1_3:-14345683 None:intergenic
CAATTCTCATGCAGATCCTG+GGG 0.624564 1_3:+14345710 Msa0105720:CDS
CCAACGGTAAGATTAGGCTG+AGG 0.627839 1_3:-14345684 None:intergenic
GTCGTACGGTGGTGATGAGA+CGG 0.634248 1_3:-14343251 None:intergenic
GATCAACCATGGAGTCGCGC+CGG 0.634384 1_3:+14343519 Msa0105720:CDS
GATTCCGGAGGTATGCAGGA+AGG 0.635167 1_3:+14345512 Msa0105720:CDS
GGAAATCTGATCGTGGAGTG+AGG 0.641872 1_3:-14343390 None:intergenic
GAATCCAAACGTACTTGCAG+CGG 0.644221 1_3:-14343488 None:intergenic
GATAAAGAAGTGGTGCGTGT+GGG 0.647211 1_3:+14345549 Msa0105720:CDS
TCCGGAGGTATGCAGGAAGG+AGG 0.655340 1_3:+14345515 Msa0105720:CDS
GTAAAAGGCCTAATAGACTC+CGG 0.658738 1_3:+14343316 Msa0105720:CDS
ACGAAGCTGTTCAACGACAG+CGG 0.666137 1_3:-14343464 None:intergenic
TTACAGGTTAGGTCCCAACA+TGG 0.668383 1_3:+14345768 Msa0105720:CDS
GAAGTTTCATGAACAGCCTG+CGG 0.668945 1_3:+14343573 Msa0105720:CDS
AGGTCAGATAGAGTTTCGGG+TGG 0.683279 1_3:-14343370 None:intergenic
GGAAGAGAAGGAGATTCCGG+AGG 0.687285 1_3:+14345500 Msa0105720:CDS
GGGAATGGTTTATGGCTGAG+AGG 0.688908 1_3:-14343438 None:intergenic
GATGGAGTGGGATAAAGAAG+TGG 0.690586 1_3:+14345539 Msa0105720:CDS
TAGAAGGATTGGCTAATACA+CGG 0.694993 1_3:-14346162 None:intergenic
GTGATGTATCTATAAAGCAG+CGG 0.709204 1_3:+14346372 Msa0105720:exon
AAAACAGCAATCGAGACCCG+TGG 0.709361 1_3:-14346190 None:intergenic
TGCATGAGAATTGAGTCCAA+CGG 0.715845 1_3:-14345700 None:intergenic
TAAGATGGGACCTGTCCCAG+CGG 0.729083 1_3:+14345479 Msa0105720:CDS
GTACGGTGGTGATGAGACGG+TGG 0.734372 1_3:-14343248 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAAATTAAGATTACA+TGG + chr1_3:14344110-14344129 Msa0105720:intron 10.0%
!!! TTTTTAAATTAAGATTACAT+GGG + chr1_3:14344111-14344130 Msa0105720:intron 10.0%
!!! ACCTAATTTTTATTATATTA+GGG - chr1_3:14344313-14344332 None:intergenic 10.0%
!!! CTTATTTTTGAATTTCATTT+TGG - chr1_3:14343080-14343099 None:intergenic 15.0%
!! TTATGAATTGAATTAATGAT+GGG - chr1_3:14343186-14343205 None:intergenic 15.0%
!!! TATAGCATTTTTTTATAAGT+AGG - chr1_3:14344175-14344194 None:intergenic 15.0%
!! ACCCTAATATAATAAAAATT+AGG + chr1_3:14344309-14344328 Msa0105720:intron 15.0%
!!! GACCTAATTTTTATTATATT+AGG - chr1_3:14344314-14344333 None:intergenic 15.0%
!!! TTAAAATTAGTCATCTTTTT+AGG - chr1_3:14344540-14344559 None:intergenic 15.0%
!!! ATGAATACTTTTAAAATTAC+AGG + chr1_3:14344889-14344908 Msa0105720:intron 15.0%
!! TGTATATGTATGTATATATT+AGG + chr1_3:14346499-14346518 Msa0105720:three_prime_UTR 15.0%
!! TGATAAATTTGTATATTATG+TGG - chr1_3:14346542-14346561 None:intergenic 15.0%
!! GTTATGAATTGAATTAATGA+TGG - chr1_3:14343187-14343206 None:intergenic 20.0%
!!! TTGACTAAAAAGATCATTTT+TGG - chr1_3:14344242-14344261 None:intergenic 20.0%
!!! AAAAGATGACTAATTTTAAG+TGG + chr1_3:14344541-14344560 Msa0105720:intron 20.0%
!!! AAAGATGACTAATTTTAAGT+GGG + chr1_3:14344542-14344561 Msa0105720:intron 20.0%
!!! AGTCACTAAAAGTAATTTTT+AGG - chr1_3:14344748-14344767 None:intergenic 20.0%
!! TCTAAATTAAAAAATGCAGT+TGG + chr1_3:14344928-14344947 Msa0105720:intron 20.0%
!! AAACAATTAACTAACTGAAT+CGG - chr1_3:14345026-14345045 None:intergenic 20.0%
!!! TCAGTTAGTTAATTGTTTTT+TGG + chr1_3:14345028-14345047 Msa0105720:intron 20.0%
!!! AATTTAGTTTCTAAATTTGC+AGG + chr1_3:14345271-14345290 Msa0105720:intron 20.0%
!! TTATTCAAAAAGAAAAGACA+AGG - chr1_3:14345891-14345910 None:intergenic 20.0%
!!! GAAAATTTATTGTGTTTTGA+TGG + chr1_3:14345980-14345999 Msa0105720:intron 20.0%
!! TGAGAAATCGAAATTAAAAA+AGG - chr1_3:14346086-14346105 None:intergenic 20.0%
!!! ATTATCTGAGACAAAAATTA+TGG - chr1_3:14346112-14346131 None:intergenic 20.0%
!!! TCATGCTTATTTAAGTTATT+AGG + chr1_3:14346452-14346471 Msa0105720:three_prime_UTR 20.0%
!!! CATGCTTATTTAAGTTATTA+GGG + chr1_3:14346453-14346472 Msa0105720:three_prime_UTR 20.0%
!! AATTGAATTAATGATGGGAA+GGG - chr1_3:14343181-14343200 None:intergenic 25.0%
!! TCATAAATAATTTTCGAACC+TGG - chr1_3:14343702-14343721 None:intergenic 25.0%
! AATATATCACAAACACATTC+AGG + chr1_3:14343764-14343783 Msa0105720:intron 25.0%
! AACTTATAACAGATAGTTGA+TGG + chr1_3:14343878-14343897 Msa0105720:intron 25.0%
! TTATAACAAATAGCTGTTAG+TGG + chr1_3:14343985-14344004 Msa0105720:intron 25.0%
!! AAAACTAAAAGGACTTGTTT+GGG - chr1_3:14344655-14344674 None:intergenic 25.0%
!! AAAAACTAAAAGGACTTGTT+TGG - chr1_3:14344654-14344673 None:intergenic 25.0%
! GAAACGATTCAAAAACTAAA+AGG - chr1_3:14344644-14344663 None:intergenic 25.0%
!!! TTTCAAACAAGTCATTTTAG+AGG + chr1_3:14344458-14344477 Msa0105720:intron 25.0%
!!! ATCTTTTTAGGTATGTCAAA+TGG - chr1_3:14344528-14344547 None:intergenic 25.0%
!! CTAACTATGCTATCTAAAAT+AGG + chr1_3:14344613-14344632 Msa0105720:intron 25.0%
! GAAACGATTCAAAAACTAAA+AGG + chr1_3:14344644-14344663 Msa0105720:intron 25.0%
!! AAAAACTAAAAGGACTTGTT+TGG + chr1_3:14344654-14344673 Msa0105720:intron 25.0%
!! AAAACTAAAAGGACTTGTTT+GGG + chr1_3:14344655-14344674 Msa0105720:intron 25.0%
!!! CATATTTTTTCACTTTCTCA+TGG - chr1_3:14344835-14344854 None:intergenic 25.0%
! AGTAACATAATCAAACGTAT+CGG - chr1_3:14345180-14345199 None:intergenic 25.0%
! ATAAAAGACTGATGAAATTG+AGG - chr1_3:14345325-14345344 None:intergenic 25.0%
!! TACAATTTTCAGAACCAAAA+TGG + chr1_3:14345422-14345441 Msa0105720:intron 25.0%
!! ATAACGATGAAATACCATTT+TGG - chr1_3:14345439-14345458 None:intergenic 25.0%
!! GTATTTCATCGTTATTTCAA+TGG + chr1_3:14345444-14345463 Msa0105720:intron 25.0%
!! ATGTTCACATCAATTTTTCA+AGG + chr1_3:14345951-14345970 Msa0105720:intron 25.0%
! GTAATAGTAACTTTGTAAGA+TGG + chr1_3:14346417-14346436 Msa0105720:three_prime_UTR 25.0%
TGATTCTCAAGGAAGAAAAT+AGG - chr1_3:14343132-14343151 None:intergenic 30.0%
! GAATTGAATTAATGATGGGA+AGG - chr1_3:14343182-14343201 None:intergenic 30.0%
AAGATCAACGTTCGAAATAT+AGG - chr1_3:14343644-14343663 None:intergenic 30.0%
!! TTATAACAGATAGTTGATGG+TGG + chr1_3:14343881-14343900 Msa0105720:intron 30.0%
GTAGTGTTCAATAGAACTAA+TGG + chr1_3:14344029-14344048 Msa0105720:intron 30.0%
ATAAGCTTGTGAAAAAACGA+TGG + chr1_3:14344213-14344232 Msa0105720:intron 30.0%
ATTAGGTCAAATGCATCTAA+AGG + chr1_3:14344326-14344345 Msa0105720:intron 30.0%
GGGAAAAACGAAAAACTTAA+AGG - chr1_3:14344704-14344723 None:intergenic 30.0%
GAAACTTAAAGGATCACTTT+GGG - chr1_3:14344373-14344392 None:intergenic 30.0%
TGAAACTTAAAGGATCACTT+TGG - chr1_3:14344374-14344393 None:intergenic 30.0%
!!! TTGGGACTTTTGAAACTTAA+AGG - chr1_3:14344673-14344692 None:intergenic 30.0%
! GAAACTTAAAGGACTTGTTT+GGG - chr1_3:14344402-14344421 None:intergenic 30.0%
! TGAAACTTAAAGGACTTGTT+TGG - chr1_3:14344403-14344422 None:intergenic 30.0%
!!! TTGGGACTTTTGAAACTTAA+AGG - chr1_3:14344673-14344692 None:intergenic 30.0%
!!! TTTTTAGGTATGTCAAATGG+TGG - chr1_3:14344525-14344544 None:intergenic 30.0%
!! ACTAATTTTAAGTGGGTGTT+AGG + chr1_3:14344549-14344568 Msa0105720:intron 30.0%
!!! TTGGGACTTTTGAAACTTAA+AGG + chr1_3:14344673-14344692 Msa0105720:intron 30.0%
GGGAAAAACGAAAAACTTAA+AGG + chr1_3:14344704-14344723 Msa0105720:intron 30.0%
TTTAGGTCAAATGCATCTAA+AGG - chr1_3:14344731-14344750 None:intergenic 30.0%
ATGTTACTCACACACTAAAT+AGG + chr1_3:14345192-14345211 Msa0105720:intron 30.0%
ATTAACATGATCAACCCAAT+GGG + chr1_3:14345355-14345374 Msa0105720:intron 30.0%
! TGGAATTTTGCAGATTAAGA+TGG + chr1_3:14345464-14345483 Msa0105720:intron 30.0%
! GGAATTTTGCAGATTAAGAT+GGG + chr1_3:14345465-14345484 Msa0105720:intron 30.0%
CAACATTGGAGATTTATTTC+AGG + chr1_3:14345830-14345849 Msa0105720:CDS 30.0%
CACAATCACAAAACACTAAT+TGG - chr1_3:14346024-14346043 None:intergenic 30.0%
! TTCTTTAAGAAAGAGCTTGA+TGG + chr1_3:14346322-14346341 Msa0105720:CDS 30.0%
GAAGTACATTGCTGAATAAA+GGG + chr1_3:14346475-14346494 Msa0105720:three_prime_UTR 30.0%
GGCTTAATACATACATGCTT+CGG - chr1_3:14343111-14343130 None:intergenic 35.0%
! AATGTTTGTGTTTGGGGTTT+GGG - chr1_3:14343158-14343177 None:intergenic 35.0%
! ATTCTTTCACGGCTTTTACA+CGG - chr1_3:14343276-14343295 None:intergenic 35.0%
TGTTTCGTCGAATTCTTTCA+CGG - chr1_3:14343287-14343306 None:intergenic 35.0%
GAATTCGACGAAACAAAATC+CGG + chr1_3:14343292-14343311 Msa0105720:CDS 35.0%
!! TTTTGATTCCGGAGTCTATT+AGG - chr1_3:14343327-14343346 None:intergenic 35.0%
!!! TGATGGAATGGTTTTGATTC+CGG - chr1_3:14343338-14343357 None:intergenic 35.0%
! ATGGATGAAGAATGATGGAA+TGG - chr1_3:14343350-14343369 None:intergenic 35.0%
! TTCTTTCAAGTGATCAACCA+TGG + chr1_3:14343508-14343527 Msa0105720:CDS 35.0%
ACCAAAGAAAAAACACGACT+AGG + chr1_3:14343821-14343840 Msa0105720:intron 35.0%
!!! TCCTAGTCGTGTTTTTTCTT+TGG - chr1_3:14343825-14343844 None:intergenic 35.0%
GTTGAAAAACCAGCTTATAG+AGG + chr1_3:14343956-14343975 Msa0105720:intron 35.0%
TAAGTTCATCCTCTATAAGC+TGG - chr1_3:14343968-14343987 None:intergenic 35.0%
!! CAAGTCATTTTAGAGGATGA+TGG + chr1_3:14344465-14344484 Msa0105720:intron 35.0%
TGAAACTTAAAGGACCACTT+TGG + chr1_3:14344683-14344702 Msa0105720:intron 35.0%
GAAACTTAAAGGACCACTTT+GGG + chr1_3:14344684-14344703 Msa0105720:intron 35.0%
!! GTTTTTCGTTTTTCCCAAAG+TGG - chr1_3:14344357-14344376 None:intergenic 35.0%
TAATCAAACGTATCGGAAGA+AGG - chr1_3:14345173-14345192 None:intergenic 35.0%
GATTAACATGATCAACCCAA+TGG + chr1_3:14345354-14345373 Msa0105720:intron 35.0%
GTATTGTTGCAGGATCATAT+TGG + chr1_3:14345741-14345760 Msa0105720:CDS 35.0%
GACATTAATCCAACCATGTT+GGG - chr1_3:14345784-14345803 None:intergenic 35.0%
TGACATTAATCCAACCATGT+TGG - chr1_3:14345785-14345804 None:intergenic 35.0%
ATTAATGTCAAGCCTCTTGA+TGG + chr1_3:14345795-14345814 Msa0105720:CDS 35.0%
!!! TGTGTTTTGATGGAAATCAC+AGG + chr1_3:14345990-14346009 Msa0105720:intron 35.0%
!!! GTGTTTTGATGGAAATCACA+GGG + chr1_3:14345991-14346010 Msa0105720:intron 35.0%
CTTGGCATTACGAAAAGAAA+AGG - chr1_3:14346052-14346071 None:intergenic 35.0%
AAAAAGGACAGCAAAATGCT+TGG - chr1_3:14346070-14346089 None:intergenic 35.0%
!! TAGAAGGATTGGCTAATACA+CGG - chr1_3:14346165-14346184 None:intergenic 35.0%
GTGAAATCTCTATAAAGAGC+TGG - chr1_3:14346280-14346299 None:intergenic 35.0%
GTGATGTATCTATAAAGCAG+CGG + chr1_3:14346372-14346391 Msa0105720:exon 35.0%
! GGAAGTACATTGCTGAATAA+AGG + chr1_3:14346474-14346493 Msa0105720:three_prime_UTR 35.0%
!!! GGTTTGGGTTTTGATTCTCA+AGG - chr1_3:14343143-14343162 None:intergenic 40.0%
! GAATGTTTGTGTTTGGGGTT+TGG - chr1_3:14343159-14343178 None:intergenic 40.0%
GAAGGGAATGTTTGTGTTTG+GGG - chr1_3:14343164-14343183 None:intergenic 40.0%
GGAAGGGAATGTTTGTGTTT+GGG - chr1_3:14343165-14343184 None:intergenic 40.0%
GAAACAAAATCCGGCGTAAA+AGG + chr1_3:14343301-14343320 Msa0105720:CDS 40.0%
GTAAAAGGCCTAATAGACTC+CGG + chr1_3:14343316-14343335 Msa0105720:CDS 40.0%
AGTGAGGTCAGATAGAGTTT+CGG - chr1_3:14343377-14343396 None:intergenic 40.0%
!! ATTGTGGGAATTTCTGGTTG+GGG - chr1_3:14343415-14343434 None:intergenic 40.0%
!! GATTGTGGGAATTTCTGGTT+GGG - chr1_3:14343416-14343435 None:intergenic 40.0%
CTCATCTTTGGTACCAAATC+TGG - chr1_3:14344577-14344596 None:intergenic 40.0%
TGGTACCAAAGATGAGTTCA+AGG + chr1_3:14344581-14344600 Msa0105720:intron 40.0%
TGCTTCCTTGAACTCATCTT+TGG - chr1_3:14344589-14344608 None:intergenic 40.0%
!! CTGAATCGGTTCGTAACAAT+CGG - chr1_3:14345012-14345031 None:intergenic 40.0%
GGTTAGGATTACGTGAAGAA+AGG + chr1_3:14345601-14345620 Msa0105720:CDS 40.0%
TGAAGAAAGGCTCACAGAAT+TGG + chr1_3:14345614-14345633 Msa0105720:CDS 40.0%
GAAGAAAGGCTCACAGAATT+GGG + chr1_3:14345615-14345634 Msa0105720:CDS 40.0%
TTGAGTCCAACGGTAAGATT+AGG - chr1_3:14345693-14345712 None:intergenic 40.0%
TGCATGAGAATTGAGTCCAA+CGG - chr1_3:14345703-14345722 None:intergenic 40.0%
TCAATTCTCATGCAGATCCT+GGG + chr1_3:14345709-14345728 Msa0105720:CDS 40.0%
TTGTTGCAGGATCATATTGG+TGG + chr1_3:14345744-14345763 Msa0105720:CDS 40.0%
! ATATTGGTGGCTTACAGGTT+AGG + chr1_3:14345757-14345776 Msa0105720:CDS 40.0%
ATAACCAAAGCTCCATCAAG+AGG - chr1_3:14345810-14345829 None:intergenic 40.0%
! GGAGCTTTGGTTATCAACAT+TGG + chr1_3:14345816-14345835 Msa0105720:CDS 40.0%
GTCTCAGATAATTTCGAACG+AGG + chr1_3:14346120-14346139 Msa0105720:intron 40.0%
!!! GATTGCTGTTTTCCTAAACC+CGG + chr1_3:14346201-14346220 Msa0105720:CDS 40.0%
!!! ATTGCTGTTTTCCTAAACCC+GGG + chr1_3:14346202-14346221 Msa0105720:CDS 40.0%
! TTTTCCTAAACCCGGGTAAT+AGG + chr1_3:14346209-14346228 Msa0105720:CDS 40.0%
TTTCCTAAACCCGGGTAATA+GGG + chr1_3:14346210-14346229 Msa0105720:CDS 40.0%
CGCTCAACGAATTTATGACA+AGG + chr1_3:14346299-14346318 Msa0105720:CDS 40.0%
ATCTATAAAGCAGCGGTTTC+TGG + chr1_3:14346379-14346398 Msa0105720:three_prime_UTR 40.0%
GGGAAGGGAATGTTTGTGTT+TGG - chr1_3:14343166-14343185 None:intergenic 45.0%
! GTCTATTAGGCCTTTTACGC+CGG - chr1_3:14343314-14343333 None:intergenic 45.0%
GGTGGATGGATGAAGAATGA+TGG - chr1_3:14343355-14343374 None:intergenic 45.0%
GTGAGGTCAGATAGAGTTTC+GGG - chr1_3:14343376-14343395 None:intergenic 45.0%
!! TTGTGGGAATTTCTGGTTGG+GGG - chr1_3:14343414-14343433 None:intergenic 45.0%
!! CGATTGTGGGAATTTCTGGT+TGG - chr1_3:14343417-14343436 None:intergenic 45.0%
AGGTCGATTGTGGGAATTTC+TGG - chr1_3:14343421-14343440 None:intergenic 45.0%
GAATCCAAACGTACTTGCAG+CGG - chr1_3:14343491-14343510 None:intergenic 45.0%
GAAGTTTCATGAACAGCCTG+CGG + chr1_3:14343573-14343592 Msa0105720:CDS 45.0%
TCGAGCACATTAGTCCCATT+GGG - chr1_3:14345372-14345391 None:intergenic 45.0%
GATGGAGTGGGATAAAGAAG+TGG + chr1_3:14345539-14345558 Msa0105720:CDS 45.0%
GATAAAGAAGTGGTGCGTGT+GGG + chr1_3:14345549-14345568 Msa0105720:CDS 45.0%
! CGTGTGGGAGATATTTTGCT+GGG + chr1_3:14345564-14345583 Msa0105720:CDS 45.0%
ACAGAATTGGGTTTGTCGCA+AGG + chr1_3:14345627-14345646 Msa0105720:CDS 45.0%
CAGAATTGGGTTTGTCGCAA+GGG + chr1_3:14345628-14345647 Msa0105720:CDS 45.0%
GAGGGCAAAATGGGTAATAG+TGG - chr1_3:14345668-14345687 None:intergenic 45.0%
GATTAGGCTGAGGGCAAAAT+GGG - chr1_3:14345677-14345696 None:intergenic 45.0%
AGATTAGGCTGAGGGCAAAA+TGG - chr1_3:14345678-14345697 None:intergenic 45.0%
CAACGGTAAGATTAGGCTGA+GGG - chr1_3:14345686-14345705 None:intergenic 45.0%
CTCAATTCTCATGCAGATCC+TGG + chr1_3:14345708-14345727 Msa0105720:CDS 45.0%
CAATTCTCATGCAGATCCTG+GGG + chr1_3:14345710-14345729 Msa0105720:CDS 45.0%
AACAATACTGTCAATGCCCC+AGG - chr1_3:14345729-14345748 None:intergenic 45.0%
!! GGCATTGACAGTATTGTTGC+AGG + chr1_3:14345731-14345750 Msa0105720:CDS 45.0%
! GGATCATATTGGTGGCTTAC+AGG + chr1_3:14345752-14345771 Msa0105720:CDS 45.0%
TTACAGGTTAGGTCCCAACA+TGG + chr1_3:14345768-14345787 Msa0105720:CDS 45.0%
AAGAGCTTCTCCCTATTACC+CGG - chr1_3:14346223-14346242 None:intergenic 45.0%
GGTAATAGGGAGAAGCTCTT+TGG + chr1_3:14346223-14346242 Msa0105720:CDS 45.0%
!! GCTGATGTTAGCTCTGGTAA+AGG - chr1_3:14346250-14346269 None:intergenic 45.0%
TTCTCTGCTGATGTTAGCTC+TGG - chr1_3:14346256-14346275 None:intergenic 45.0%
! ACGGCTTTTACACGGTCGTA+CGG - chr1_3:14343268-14343287 None:intergenic 50.0%
! CAGATAGAGTTTCGGGTGGA+TGG - chr1_3:14343369-14343388 None:intergenic 50.0%
AGGTCAGATAGAGTTTCGGG+TGG - chr1_3:14343373-14343392 None:intergenic 50.0%
GGAAATCTGATCGTGGAGTG+AGG - chr1_3:14343393-14343412 None:intergenic 50.0%
ATGGCTGAGAGGTCGATTGT+GGG - chr1_3:14343430-14343449 None:intergenic 50.0%
TATGGCTGAGAGGTCGATTG+TGG - chr1_3:14343431-14343450 None:intergenic 50.0%
GGGAATGGTTTATGGCTGAG+AGG - chr1_3:14343441-14343460 None:intergenic 50.0%
ACGAAGCTGTTCAACGACAG+CGG - chr1_3:14343467-14343486 None:intergenic 50.0%
ATCACACTTCGCGTCAACTC+CGG - chr1_3:14343541-14343560 None:intergenic 50.0%
GAGTTGACGCGAAGTGTGAT+TGG + chr1_3:14343541-14343560 Msa0105720:CDS 50.0%
! AGAGGAAGAAGGTGTACCGT+AGG + chr1_3:14343599-14343618 Msa0105720:CDS 50.0%
! GAGGAAGAAGGTGTACCGTA+GGG + chr1_3:14343600-14343619 Msa0105720:CDS 50.0%
AAGGTGTACCGTAGGGAGAT+GGG + chr1_3:14343607-14343626 Msa0105720:CDS 50.0%
TGGGTGTTAGGAGCCAGATT+TGG + chr1_3:14344561-14344580 Msa0105720:intron 50.0%
GTCGAGCACATTAGTCCCAT+TGG - chr1_3:14345373-14345392 None:intergenic 50.0%
GAATCTCCTTCTCTTCCGCT+GGG - chr1_3:14345497-14345516 None:intergenic 50.0%
AGCGGAAGAGAAGGAGATTC+CGG + chr1_3:14345497-14345516 Msa0105720:CDS 50.0%
GGATAAAGAAGTGGTGCGTG+TGG + chr1_3:14345548-14345567 Msa0105720:CDS 50.0%
! GCGTGTGGGAGATATTTTGC+TGG + chr1_3:14345563-14345582 Msa0105720:CDS 50.0%
!! TTGCTGGGCTTGTTGAGTGA+AGG + chr1_3:14345579-14345598 Msa0105720:CDS 50.0%
!! TGCTGGGCTTGTTGAGTGAA+GGG + chr1_3:14345580-14345599 Msa0105720:CDS 50.0%
!! GGCTTGTTGAGTGAAGGGTT+AGG + chr1_3:14345585-14345604 Msa0105720:CDS 50.0%
AATTGGGTTTGTCGCAAGGG+AGG + chr1_3:14345631-14345650 Msa0105720:CDS 50.0%
ATTGGGTTTGTCGCAAGGGA+GGG + chr1_3:14345632-14345651 Msa0105720:CDS 50.0%
CCAACGGTAAGATTAGGCTG+AGG - chr1_3:14345687-14345706 None:intergenic 50.0%
CCTCAGCCTAATCTTACCGT+TGG + chr1_3:14345684-14345703 Msa0105720:CDS 50.0%
AGGTTAGGTCCCAACATGGT+TGG + chr1_3:14345772-14345791 Msa0105720:CDS 50.0%
CAAGCCTCTTGATGGAGCTT+TGG + chr1_3:14345803-14345822 Msa0105720:CDS 50.0%
CCAATCCTTCTAACGAGCCA+CGG + chr1_3:14346173-14346192 Msa0105720:CDS 50.0%
CAATCCTTCTAACGAGCCAC+GGG + chr1_3:14346174-14346193 Msa0105720:CDS 50.0%
AAAACAGCAATCGAGACCCG+TGG - chr1_3:14346193-14346212 None:intergenic 50.0%
TCTCCCTATTACCCGGGTTT+AGG - chr1_3:14346216-14346235 None:intergenic 50.0%
AGAGCTTCTCCCTATTACCC+GGG - chr1_3:14346222-14346241 None:intergenic 50.0%
! GTCGTACGGTGGTGATGAGA+CGG - chr1_3:14343254-14343273 None:intergenic 55.0%
! GCTTTTACACGGTCGTACGG+TGG - chr1_3:14343265-14343284 None:intergenic 55.0%
GGTTGGGGGAAATCTGATCG+TGG - chr1_3:14343400-14343419 None:intergenic 55.0%
AGCGGCACGGGAATGGTTTA+TGG - chr1_3:14343449-14343468 None:intergenic 55.0%
CGTTCCGCTGCAAGTACGTT+TGG + chr1_3:14343484-14343503 Msa0105720:CDS 55.0%
! GAAGGTGTACCGTAGGGAGA+TGG + chr1_3:14343606-14343625 Msa0105720:CDS 55.0%
TACCGTAGGGAGATGGGAAC+TGG + chr1_3:14343613-14343632 Msa0105720:CDS 55.0%
CACCAGTTCCCATCTCCCTA+CGG - chr1_3:14343618-14343637 None:intergenic 55.0%
!! TCGCTTCTAAAGCTGCCAGC+TGG + chr1_3:14343665-14343684 Msa0105720:CDS 55.0%
TAAGATGGGACCTGTCCCAG+CGG + chr1_3:14345479-14345498 Msa0105720:CDS 55.0%
GGAATCTCCTTCTCTTCCGC+TGG - chr1_3:14345498-14345517 None:intergenic 55.0%
GGAAGAGAAGGAGATTCCGG+AGG + chr1_3:14345500-14345519 Msa0105720:CDS 55.0%
! AGGAGATTCCGGAGGTATGC+AGG + chr1_3:14345508-14345527 Msa0105720:CDS 55.0%
! GATTCCGGAGGTATGCAGGA+AGG + chr1_3:14345512-14345531 Msa0105720:CDS 55.0%
ACCTCCTTCCTGCATACCTC+CGG - chr1_3:14345519-14345538 None:intergenic 55.0%
GGTATGCAGGAAGGAGGTGA+TGG + chr1_3:14345521-14345540 Msa0105720:CDS 55.0%
!! CAGGAAGGAGGTGATGGAGT+GGG + chr1_3:14345527-14345546 Msa0105720:CDS 55.0%
TTTGTCGCAAGGGAGGGTGA+TGG + chr1_3:14345638-14345657 Msa0105720:CDS 55.0%
CCGTGGCTCGTTAGAAGGAT+TGG - chr1_3:14346176-14346195 None:intergenic 55.0%
GGTGGTGAAGGGGTGGCTAT+TGG - chr1_3:14343223-14343242 None:intergenic 60.0%
!! GGTGGTTGGTGGTGGTGAAG+GGG - chr1_3:14343233-14343252 None:intergenic 60.0%
!! CGGTGGTTGGTGGTGGTGAA+GGG - chr1_3:14343234-14343253 None:intergenic 60.0%
!! ACGGTGGTTGGTGGTGGTGA+AGG - chr1_3:14343235-14343254 None:intergenic 60.0%
!! GATGAGACGGTGGTTGGTGG+TGG - chr1_3:14343241-14343260 None:intergenic 60.0%
GGTGATGAGACGGTGGTTGG+TGG - chr1_3:14343244-14343263 None:intergenic 60.0%
! GGTGGTGATGAGACGGTGGT+TGG - chr1_3:14343247-14343266 None:intergenic 60.0%
! GTACGGTGGTGATGAGACGG+TGG - chr1_3:14343251-14343270 None:intergenic 60.0%
CTGTTCAACGACAGCGGCAC+GGG - chr1_3:14343461-14343480 None:intergenic 60.0%
GCTGTTCAACGACAGCGGCA+CGG - chr1_3:14343462-14343481 None:intergenic 60.0%
GATCAACCATGGAGTCGCGC+CGG + chr1_3:14343519-14343538 Msa0105720:CDS 60.0%
ATGAACAGCCTGCGGACGAG+AGG + chr1_3:14343581-14343600 Msa0105720:CDS 60.0%
ACCTTCTTCCTCTCGTCCGC+AGG - chr1_3:14343592-14343611 None:intergenic 60.0%
ACCTGTCCCAGCGGAAGAGA+AGG + chr1_3:14345488-14345507 Msa0105720:CDS 60.0%
TCCTTCTCTTCCGCTGGGAC+AGG - chr1_3:14345492-14345511 None:intergenic 60.0%
! TCCGGAGGTATGCAGGAAGG+AGG + chr1_3:14345515-14345534 Msa0105720:CDS 60.0%
!! GCAGGAAGGAGGTGATGGAG+TGG + chr1_3:14345526-14345545 Msa0105720:CDS 60.0%
! TCGCAAGGGAGGGTGATGGT+TGG + chr1_3:14345642-14345661 Msa0105720:CDS 60.0%
GAGACCCGTGGCTCGTTAGA+AGG - chr1_3:14346181-14346200 None:intergenic 60.0%
!! GGTTGGTGGTGGTGAAGGGG+TGG - chr1_3:14343230-14343249 None:intergenic 65.0%
CAACGACAGCGGCACGGGAA+TGG - chr1_3:14343456-14343475 None:intergenic 65.0%
TCAACTCCGGCGCGACTCCA+TGG - chr1_3:14343528-14343547 None:intergenic 65.0%
GCCTGCGGACGAGAGGAAGA+AGG + chr1_3:14343588-14343607 Msa0105720:CDS 65.0%
CTGGAGTGTGTCACGCCAGC+TGG - chr1_3:14343683-14343702 None:intergenic 65.0%
CAGCTGGCGTGACACACTCC+AGG + chr1_3:14343681-14343700 Msa0105720:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 14343077 14346578 14343077 ID=Msa0105720;Name=Msa0105720
chr1_3 mRNA 14343077 14346578 14343077 ID=Msa0105720-mRNA-1;Parent=Msa0105720;Name=Msa0105720-mRNA-1;_AED=0.05;_eAED=0.05;_QI=5|1|1|1|1|1|3|203|414
chr1_3 exon 14343077 14343702 14343077 ID=Msa0105720-mRNA-1:exon:5632;Parent=Msa0105720-mRNA-1
chr1_3 exon 14345477 14345851 14345477 ID=Msa0105720-mRNA-1:exon:5633;Parent=Msa0105720-mRNA-1
chr1_3 exon 14346127 14346578 14346127 ID=Msa0105720-mRNA-1:exon:5634;Parent=Msa0105720-mRNA-1
chr1_3 five_prime_UTR 14343077 14343081 14343077 ID=Msa0105720-mRNA-1:five_prime_utr;Parent=Msa0105720-mRNA-1
chr1_3 CDS 14343082 14343702 14343082 ID=Msa0105720-mRNA-1:cds;Parent=Msa0105720-mRNA-1
chr1_3 CDS 14345477 14345851 14345477 ID=Msa0105720-mRNA-1:cds;Parent=Msa0105720-mRNA-1
chr1_3 CDS 14346127 14346375 14346127 ID=Msa0105720-mRNA-1:cds;Parent=Msa0105720-mRNA-1
chr1_3 three_prime_UTR 14346376 14346578 14346376 ID=Msa0105720-mRNA-1:three_prime_utr;Parent=Msa0105720-mRNA-1
Gene Sequence

>Msa0105720

ATGAAATTCAAAAATAAGCTAAGAGACCGAAGCATGTATGTATTAAGCCTATTTTCTTCCTTGAGAATCAAAACCCAAACCCCAAACACAAACATTCCCTTCCCATCATTAATTCAATTCATAACAATGTCATCATCACCAATAGCCACCCCTTCACCACCACCAACCACCGTCTCATCACCACCGTACGACCGTGTAAAAGCCGTGAAAGAATTCGACGAAACAAAATCCGGCGTAAAAGGCCTAATAGACTCCGGAATCAAAACCATTCCATCATTCTTCATCCATCCACCCGAAACTCTATCTGACCTCACTCCACGATCAGATTTCCCCCAACCAGAAATTCCCACAATCGACCTCTCAGCCATAAACCATTCCCGTGCCGCTGTCGTTGAACAGCTTCGTTCCGCTGCAAGTACGTTTGGATTCTTTCAAGTGATCAACCATGGAGTCGCGCCGGAGTTGACGCGAAGTGTGATTGGTGCTATGAAGAAGTTTCATGAACAGCCTGCGGACGAGAGGAAGAAGGTGTACCGTAGGGAGATGGGAACTGGTGTTTCCTATATTTCGAACGTTGATCTTTTCGCTTCTAAAGCTGCCAGCTGGCGTGACACACTCCAGATTAAGATGGGACCTGTCCCAGCGGAAGAGAAGGAGATTCCGGAGGTATGCAGGAAGGAGGTGATGGAGTGGGATAAAGAAGTGGTGCGTGTGGGAGATATTTTGCTGGGCTTGTTGAGTGAAGGGTTAGGATTACGTGAAGAAAGGCTCACAGAATTGGGTTTGTCGCAAGGGAGGGTGATGGTTGGCCACTATTACCCATTTTGCCCTCAGCCTAATCTTACCGTTGGACTCAATTCTCATGCAGATCCTGGGGCATTGACAGTATTGTTGCAGGATCATATTGGTGGCTTACAGGTTAGGTCCCAACATGGTTGGATTAATGTCAAGCCTCTTGATGGAGCTTTGGTTATCAACATTGGAGATTTATTTCAGATAATTTCGAACGAGGAGTATAAGAGTGCTGATCACCGTGTATTAGCCAATCCTTCTAACGAGCCACGGGTCTCGATTGCTGTTTTCCTAAACCCGGGTAATAGGGAGAAGCTCTTTGGTCCTTTACCAGAGCTAACATCAGCAGAGAAGCCAGCTCTTTATAGAGATTTCACGCTCAACGAATTTATGACAAGGTTCTTTAAGAAAGAGCTTGATGGTAAATCATTGACTAATTTCTTCAGAAAGTGA
Protein sequence

>Msa0105720

MKFKNKLRDRSMYVLSLFSSLRIKTQTPNTNIPFPSLIQFITMSSSPIATPSPPPTTVSSPPYDRVKAVKEFDETKSGVKGLIDSGIKTIPSFFIHPPETLSDLTPRSDFPQPEIPTIDLSAINHSRAAVVEQLRSAASTFGFFQVINHGVAPELTRSVIGAMKKFHEQPADERKKVYRREMGTGVSYISNVDLFASKAASWRDTLQIKMGPVPAEEKEIPEVCRKEVMEWDKEVVRVGDILLGLLSEGLGLREERLTELGLSQGRVMVGHYYPFCPQPNLTVGLNSHADPGALTVLLQDHIGGLQVRSQHGWINVKPLDGALVINIGDLFQIISNEEYKSADHRVLANPSNEPRVSIAVFLNPGNREKLFGPLPELTSAEKPALYRDFTLNEFMTRFFKKELDGKSLTNFFRK*