Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0112350 | XP_013467180.1 | 98.178 | 439 | 7 | 1 | 1 | 438 | 1 | 439 | 0.0 | 879 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0112350 | sp|Q9FLD7|GT14A_ARATH | 45.411 | 414 | 214 | 3 | 36 | 437 | 33 | 446 | 2.62e-122 | 366 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0112350 | A0A072VHX3 | 98.178 | 439 | 7 | 1 | 1 | 438 | 1 | 439 | 0.0 | 879 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0112350 | Msa0241830 | 0.801193 | 1.010411e-48 | -8.615850e-47 |
| Msa0112350 | Msa0385830 | 0.800360 | 1.495110e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0112350 | MtrunA17_Chr1g0169461 | 98.178 | 439 | 7 | 1 | 1 | 438 | 1 | 439 | 0.0 | 879 |
| Msa0112350 | MtrunA17_Chr6g0452631 | 46.040 | 404 | 202 | 6 | 45 | 438 | 36 | 433 | 8.89e-124 | 366 |
| Msa0112350 | MtrunA17_Chr4g0010141 | 47.009 | 351 | 183 | 2 | 90 | 437 | 68 | 418 | 3.99e-117 | 348 |
| Msa0112350 | MtrunA17_Chr1g0208381 | 47.578 | 351 | 178 | 4 | 92 | 437 | 47 | 396 | 5.73e-116 | 345 |
| Msa0112350 | MtrunA17_Chr2g0317441 | 44.231 | 416 | 215 | 6 | 36 | 437 | 11 | 423 | 1.98e-113 | 339 |
| Msa0112350 | MtrunA17_Chr4g0022501 | 46.705 | 349 | 181 | 4 | 93 | 438 | 87 | 433 | 5.50e-113 | 338 |
| Msa0112350 | MtrunA17_Chr6g0460801 | 41.379 | 406 | 223 | 6 | 38 | 437 | 7 | 403 | 3.40e-105 | 317 |
| Msa0112350 | MtrunA17_Chr7g0254121 | 39.259 | 405 | 233 | 5 | 36 | 437 | 4 | 398 | 1.28e-99 | 303 |
| Msa0112350 | MtrunA17_Chr4g0002191 | 38.213 | 403 | 240 | 3 | 42 | 437 | 6 | 406 | 6.50e-92 | 284 |
| Msa0112350 | MtrunA17_Chr4g0063621 | 40.845 | 355 | 173 | 6 | 88 | 437 | 66 | 388 | 7.27e-86 | 267 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0112350 | AT3G24040.1 | 63.467 | 375 | 127 | 4 | 67 | 438 | 48 | 415 | 3.12e-173 | 492 |
| Msa0112350 | AT5G39990.1 | 45.411 | 414 | 214 | 3 | 36 | 437 | 33 | 446 | 2.66e-123 | 366 |
| Msa0112350 | AT5G15050.1 | 50.578 | 346 | 168 | 2 | 95 | 437 | 88 | 433 | 6.18e-123 | 364 |
| Msa0112350 | AT1G03520.2 | 48.725 | 353 | 176 | 4 | 88 | 437 | 7 | 357 | 8.84e-122 | 358 |
| Msa0112350 | AT1G03520.1 | 44.096 | 415 | 217 | 6 | 36 | 437 | 34 | 446 | 1.77e-120 | 358 |
| Msa0112350 | AT4G03340.1 | 42.993 | 421 | 218 | 7 | 34 | 437 | 32 | 447 | 1.16e-114 | 343 |
| Msa0112350 | AT4G27480.2 | 44.915 | 354 | 186 | 3 | 90 | 437 | 70 | 420 | 1.57e-112 | 337 |
| Msa0112350 | AT4G27480.3 | 44.915 | 354 | 186 | 3 | 90 | 437 | 70 | 420 | 1.57e-112 | 337 |
| Msa0112350 | AT4G27480.1 | 44.915 | 354 | 186 | 3 | 90 | 437 | 70 | 420 | 1.57e-112 | 337 |
| Msa0112350 | AT1G71070.1 | 45.714 | 350 | 185 | 3 | 92 | 437 | 46 | 394 | 3.23e-110 | 330 |
| Msa0112350 | AT3G15350.2 | 41.457 | 398 | 223 | 4 | 43 | 437 | 33 | 423 | 1.16e-105 | 320 |
| Msa0112350 | AT3G15350.1 | 41.457 | 398 | 223 | 4 | 43 | 437 | 33 | 423 | 1.16e-105 | 320 |
| Msa0112350 | AT4G03340.2 | 41.093 | 421 | 203 | 8 | 34 | 437 | 32 | 424 | 2.37e-104 | 317 |
| Msa0112350 | AT2G37585.1 | 42.899 | 345 | 179 | 2 | 93 | 437 | 57 | 383 | 6.87e-99 | 301 |
| Msa0112350 | AT1G53100.1 | 38.780 | 410 | 236 | 7 | 36 | 438 | 22 | 423 | 1.03e-96 | 297 |
| Msa0112350 | AT3G03690.1 | 46.207 | 290 | 154 | 2 | 93 | 381 | 52 | 340 | 1.40e-94 | 290 |
| Msa0112350 | AT1G53100.2 | 39.494 | 395 | 224 | 7 | 36 | 423 | 22 | 408 | 6.43e-94 | 289 |
| Msa0112350 | AT3G03690.2 | 48.921 | 139 | 70 | 1 | 93 | 231 | 52 | 189 | 4.82e-43 | 150 |
Find 138 sgRNAs with CRISPR-Local
Find 541 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTTGTGTGACAACATTTA+AGG | 0.179944 | 1_3:+26985571 | None:intergenic |
| GTTAATCATTCAAGCTATAT+TGG | 0.193713 | 1_3:-26991896 | Msa0112350:CDS |
| TCCATAGCATACCTCATTTC+CGG | 0.221350 | 1_3:-26992376 | Msa0112350:CDS |
| TTATGACTGTCTTGTTAAAT+TGG | 0.240979 | 1_3:+26986175 | None:intergenic |
| TGGTTTAGGGTCTTTGATTA+AGG | 0.245678 | 1_3:+26992573 | None:intergenic |
| GGTGATGTTGTTGTTGTTCC+TGG | 0.285980 | 1_3:+26992646 | None:intergenic |
| TAGAATTTAATGTGGCTATA+TGG | 0.290946 | 1_3:-26985625 | Msa0112350:three_prime_UTR |
| TTCCGGGTCAAAGGGTGATT+CGG | 0.298809 | 1_3:-26992359 | Msa0112350:CDS |
| AGTGCTTACCGCATGTTTAC+AGG | 0.299786 | 1_3:-26991056 | Msa0112350:intron |
| ATCGTTCTTATCGATCCTTT+TGG | 0.304556 | 1_3:+26985759 | None:intergenic |
| CAAACCAGGATCAACAATAA+TGG | 0.306106 | 1_3:+26991133 | None:intergenic |
| GTGGGGTAGCAAGTTAAGTA+TGG | 0.313449 | 1_3:-26985704 | Msa0112350:three_prime_UTR |
| AACAAACATATCATGCTATA+TGG | 0.323133 | 1_3:+26985598 | None:intergenic |
| GAGAACTGTAGGGAAATAAT+TGG | 0.325793 | 1_3:+26986209 | None:intergenic |
| GTTCCTGGTGGATGGTGTTT+AGG | 0.329382 | 1_3:-26985973 | Msa0112350:CDS |
| CCTTTAACATAAACAAAATC+TGG | 0.332050 | 1_3:+26992175 | None:intergenic |
| TGCTATGGAAGGTGGTGGTG+GGG | 0.337138 | 1_3:+26992390 | None:intergenic |
| TTAATCATTCAAGCTATATT+GGG | 0.340124 | 1_3:-26991895 | Msa0112350:CDS |
| TGCTAAGAATGTTCATGTTA+TGG | 0.340899 | 1_3:-26992203 | Msa0112350:CDS |
| AGTCCTGGATCGGTTGTTCC+TGG | 0.347799 | 1_3:-26985988 | Msa0112350:CDS |
| CCATAGCATACCTCATTTCC+GGG | 0.355427 | 1_3:-26992375 | Msa0112350:CDS |
| TCGAGCGTGGGTTGAGGAAG+AGG | 0.355923 | 1_3:+26992477 | None:intergenic |
| GTTGTGTTGTGTTGTGTGTT+TGG | 0.356882 | 1_3:+26992739 | None:intergenic |
| AGAATTACAAAATTTCAATT+AGG | 0.364330 | 1_3:+26985661 | None:intergenic |
| GGATGGTGTTTAGGTGAGCC+TGG | 0.369627 | 1_3:-26985964 | Msa0112350:CDS |
| TATGCTATGGAAGGTGGTGG+TGG | 0.373264 | 1_3:+26992388 | None:intergenic |
| TCCGGGTCAAAGGGTGATTC+GGG | 0.375552 | 1_3:-26992358 | Msa0112350:CDS |
| ATGCTATGGAAGGTGGTGGT+GGG | 0.376038 | 1_3:+26992389 | None:intergenic |
| TTAACAAAGTTCATATCTTT+AGG | 0.377153 | 1_3:+26991914 | None:intergenic |
| AAGCCGTTTAGAGCCTTTAC+CGG | 0.384864 | 1_3:+26985897 | None:intergenic |
| GCTAAGAATGTTCATGTTAT+GGG | 0.387021 | 1_3:-26992202 | Msa0112350:CDS |
| TGATGGGTCGGGTAAAGAAA+TGG | 0.388203 | 1_3:+26992448 | None:intergenic |
| AGATGATGCGGTGGGTTTGA+TGG | 0.388440 | 1_3:+26992431 | None:intergenic |
| GGTCAAGATGAAGAAGATAT+TGG | 0.398383 | 1_3:+26992293 | None:intergenic |
| TGAAGAAGATATTGGTTAAG+AGG | 0.401008 | 1_3:+26992301 | None:intergenic |
| AAACCAGGATCAACAATAAT+GGG | 0.408134 | 1_3:+26991134 | None:intergenic |
| TACCCTCTTGTTACTCAAGA+TGG | 0.419058 | 1_3:-26992058 | Msa0112350:intron |
| CCGATCTCGACAATGTATAT+AGG | 0.421011 | 1_3:-26985836 | Msa0112350:exon |
| TGGTCCTTAGTTTATCTAGT+GGG | 0.421403 | 1_3:-26985722 | Msa0112350:three_prime_UTR |
| GTGGTCGAAGATTGTTTCTA+TGG | 0.431015 | 1_3:+26986121 | None:intergenic |
| AAACCCATTATTGTTGATCC+TGG | 0.434422 | 1_3:-26991137 | Msa0112350:CDS |
| GTGATTCGGGTCGGATCCTT+AGG | 0.439781 | 1_3:-26992345 | Msa0112350:CDS |
| GCATGAAGAGTAAACGAAAC+AGG | 0.439879 | 1_3:+26992145 | None:intergenic |
| GAGAGAGAGGATGAGGAGGA+TGG | 0.441555 | 1_3:+26992510 | None:intergenic |
| GATTCGTTTGTCTTTGAGAT+GGG | 0.442677 | 1_3:-26992110 | Msa0112350:CDS |
| AGATCGAGAACAGGATCATC+TGG | 0.449079 | 1_3:+26986036 | None:intergenic |
| TGGAGAAGAGAGAGAGTGCT+AGG | 0.449154 | 1_3:+26992530 | None:intergenic |
| CCTGGTTTGTATCTTTCTGA+AGG | 0.450148 | 1_3:-26991119 | Msa0112350:CDS |
| AAGAGGTGAGAGAGAGGATG+AGG | 0.455507 | 1_3:+26992503 | None:intergenic |
| TGGTCGATGAGATCGAGAAC+AGG | 0.459004 | 1_3:+26986027 | None:intergenic |
| GCTAGGAATGTGTAGAGGAT+TGG | 0.460132 | 1_3:+26992547 | None:intergenic |
| ATGCGGTGGGTTTGATGGGT+CGG | 0.462041 | 1_3:+26992436 | None:intergenic |
| GTCGGGTCGAGCGTGGGTTG+AGG | 0.467223 | 1_3:+26992471 | None:intergenic |
| TAACAAGACAGTCATAAATC+AGG | 0.472591 | 1_3:-26986169 | Msa0112350:CDS |
| TGATTCGTTTGTCTTTGAGA+TGG | 0.472897 | 1_3:-26992111 | Msa0112350:CDS |
| CTGTAGGGAAATAATTGGAC+AGG | 0.475869 | 1_3:+26986214 | None:intergenic |
| TTTGATAACATGATTCATAG+TGG | 0.478590 | 1_3:-26986084 | Msa0112350:CDS |
| AATGTGTAGAGGATTGGTTT+TGG | 0.479423 | 1_3:+26992553 | None:intergenic |
| GTTTGTCTTTGAGATGGGAT+TGG | 0.482757 | 1_3:-26992105 | Msa0112350:CDS |
| AAATAATTGGACAGGGATGA+TGG | 0.483720 | 1_3:+26986222 | None:intergenic |
| GGAACAGCACATGCTTAACA+TGG | 0.484274 | 1_3:-26985942 | Msa0112350:CDS |
| TTTACCGGGTCTCAAGATAC+TGG | 0.484406 | 1_3:+26985912 | None:intergenic |
| GTTAAGCATGTGCTGTTCCC+AGG | 0.487262 | 1_3:+26985946 | None:intergenic |
| GTAAACATGCGGTAAGCACT+AGG | 0.488897 | 1_3:+26991059 | None:intergenic |
| CGAGCGTGGGTTGAGGAAGA+GGG | 0.490371 | 1_3:+26992478 | None:intergenic |
| CTGGTTTGTATCTTTCTGAA+GGG | 0.497244 | 1_3:-26991118 | Msa0112350:CDS |
| TACATTATGTGACATGAGGC+TGG | 0.504536 | 1_3:+26985801 | None:intergenic |
| TATGGAAGGTGGTGGTGGGG+TGG | 0.505908 | 1_3:+26992393 | None:intergenic |
| GACCCGGTAAAGGCTCTAAA+CGG | 0.506369 | 1_3:-26985900 | Msa0112350:CDS |
| TACCTCATTTCCGGGTCAAA+GGG | 0.506407 | 1_3:-26992367 | Msa0112350:CDS |
| ATTGTTGAATTGCTGTCAAA+TGG | 0.507843 | 1_3:-26985865 | Msa0112350:CDS |
| CCACCAGGAACAACCGATCC+AGG | 0.508967 | 1_3:+26985985 | None:intergenic |
| CGAGAGTTGCAGAGAACTGT+AGG | 0.509069 | 1_3:+26986198 | None:intergenic |
| TCAATCAGATCGTGAAAAGT+TGG | 0.509735 | 1_3:-26992260 | Msa0112350:CDS |
| AGGTGAGAGAGAGGATGAGG+AGG | 0.513179 | 1_3:+26992506 | None:intergenic |
| CCTATATACATTGTCGAGAT+CGG | 0.513723 | 1_3:+26985836 | None:intergenic |
| AGCCGTTTAGAGCCTTTACC+GGG | 0.514225 | 1_3:+26985898 | None:intergenic |
| TGCGGTGGGTTTGATGGGTC+GGG | 0.517345 | 1_3:+26992437 | None:intergenic |
| ATCATCACAATGCAAAATCC+AGG | 0.518578 | 1_3:-26992664 | Msa0112350:exon |
| ATACCTCATTTCCGGGTCAA+AGG | 0.518884 | 1_3:-26992368 | Msa0112350:CDS |
| GATGGGTCGGGTAAAGAAAT+GGG | 0.520096 | 1_3:+26992449 | None:intergenic |
| CACCCTTTGACCCGGAAATG+AGG | 0.521306 | 1_3:+26992365 | None:intergenic |
| CGATCTGATTGAGGAGCAGA+AGG | 0.527685 | 1_3:+26992271 | None:intergenic |
| GATGGTGTTTAGGTGAGCCT+GGG | 0.527992 | 1_3:-26985963 | Msa0112350:CDS |
| CTACCCCACTAGATAAACTA+AGG | 0.528361 | 1_3:+26985718 | None:intergenic |
| AAATGTTGTCACACAAACTC+TGG | 0.531352 | 1_3:-26985567 | Msa0112350:three_prime_UTR |
| CGAGAACAGGATCATCTGGC+TGG | 0.531647 | 1_3:+26986040 | None:intergenic |
| CCCGGAAATGAGGTATGCTA+TGG | 0.534508 | 1_3:+26992375 | None:intergenic |
| GATGATGCGGTGGGTTTGAT+GGG | 0.540109 | 1_3:+26992432 | None:intergenic |
| ATCATTCAAGCTATATTGGG+TGG | 0.542293 | 1_3:-26991892 | Msa0112350:CDS |
| AACGATATGAATCAACTGCT+TGG | 0.546257 | 1_3:-26985742 | Msa0112350:three_prime_UTR |
| TCAAAATCTGTTGAATTGAG+TGG | 0.549042 | 1_3:+26986102 | None:intergenic |
| CAAAGGAACAATCATCATAG+AGG | 0.549676 | 1_3:-26992709 | Msa0112350:five_prime_UTR |
| TAGGAGTAGATAACCTCCCT+CGG | 0.554642 | 1_3:-26986272 | Msa0112350:CDS |
| GATCGGTTGTTCCTGGTGGA+TGG | 0.556496 | 1_3:-26985981 | Msa0112350:CDS |
| AGTATCTTGAGACCCGGTAA+AGG | 0.556734 | 1_3:-26985910 | Msa0112350:CDS |
| GAAATGGGTCGGGTCGAGCG+TGG | 0.562818 | 1_3:+26992464 | None:intergenic |
| ATGAGGTATGCTATGGAAGG+TGG | 0.563525 | 1_3:+26992382 | None:intergenic |
| GAGCGTGGGTTGAGGAAGAG+GGG | 0.568504 | 1_3:+26992479 | None:intergenic |
| GTCGGGTAAAGAAATGGGTC+GGG | 0.570501 | 1_3:+26992454 | None:intergenic |
| ACCCGAATCACCCTTTGACC+CGG | 0.570819 | 1_3:+26992357 | None:intergenic |
| AGAGTGCTAGGAATGTGTAG+AGG | 0.572518 | 1_3:+26992542 | None:intergenic |
| GGTCCTTAGTTTATCTAGTG+GGG | 0.576866 | 1_3:-26985721 | Msa0112350:three_prime_UTR |
| TTTGAACCGAAGTCCTGGAT+CGG | 0.579759 | 1_3:-26985998 | Msa0112350:CDS |
| TTGGTCCTTAGTTTATCTAG+TGG | 0.580049 | 1_3:-26985723 | Msa0112350:three_prime_UTR |
| AAATGGGTCGGGTCGAGCGT+GGG | 0.580377 | 1_3:+26992465 | None:intergenic |
| GGTCGGGTAAAGAAATGGGT+CGG | 0.586068 | 1_3:+26992453 | None:intergenic |
| AGGTATGCTATGGAAGGTGG+TGG | 0.588917 | 1_3:+26992385 | None:intergenic |
| TGGGGTAGCAAGTTAAGTAT+GGG | 0.595282 | 1_3:-26985703 | Msa0112350:three_prime_UTR |
| GAAAGTGAAGAAGAACATTG+TGG | 0.595743 | 1_3:+26992610 | None:intergenic |
| TCACCTAAACACCATCCACC+AGG | 0.596045 | 1_3:+26985970 | None:intergenic |
| GGTCAAAGGGTGATTCGGGT+CGG | 0.597963 | 1_3:-26992354 | Msa0112350:CDS |
| TCTCGACAATGTATATAGGA+AGG | 0.601551 | 1_3:-26985832 | Msa0112350:exon |
| TAAACATGCGGTAAGCACTA+GGG | 0.604474 | 1_3:+26991060 | None:intergenic |
| ACAACACAACATGAGATCAA+AGG | 0.608705 | 1_3:-26992726 | Msa0112350:five_prime_UTR |
| GAACAACCGATCCAGGACTT+CGG | 0.609574 | 1_3:+26985992 | None:intergenic |
| TAGGCAGAAACGACATGATG+TGG | 0.611932 | 1_3:+26991933 | None:intergenic |
| CCTGGATCGGTTGTTCCTGG+TGG | 0.612034 | 1_3:-26985985 | Msa0112350:CDS |
| GAACAGCACATGCTTAACAT+GGG | 0.620212 | 1_3:-26985941 | Msa0112350:CDS |
| CTTGGTCGTAGATGATGCGG+TGG | 0.626746 | 1_3:+26992422 | None:intergenic |
| CCTTCAGAAAGATACAAACC+AGG | 0.626984 | 1_3:+26991119 | None:intergenic |
| AAGTTGCAGACAGTAGCCTA+AGG | 0.627374 | 1_3:+26992329 | None:intergenic |
| GAGAGTTGCAGAGAACTGTA+GGG | 0.628955 | 1_3:+26986199 | None:intergenic |
| GAAATGAGGTATGCTATGGA+AGG | 0.632056 | 1_3:+26992379 | None:intergenic |
| TGTCTTGGTCGTAGATGATG+CGG | 0.634922 | 1_3:+26992419 | None:intergenic |
| AAATACATCAGTAAAATCCG+AGG | 0.641816 | 1_3:+26986255 | None:intergenic |
| TTGTTACATTATGTGACATG+AGG | 0.642877 | 1_3:+26985797 | None:intergenic |
| TTGGTCGTAGATGATGCGGT+GGG | 0.650062 | 1_3:+26992423 | None:intergenic |
| ATACCATCTTGAGTAACAAG+AGG | 0.652464 | 1_3:+26992055 | None:intergenic |
| AGCGTGGGTTGAGGAAGAGG+GGG | 0.653193 | 1_3:+26992480 | None:intergenic |
| AATACATCAGTAAAATCCGA+GGG | 0.657676 | 1_3:+26986256 | None:intergenic |
| GATGCCAGTATCTTGAGACC+CGG | 0.657729 | 1_3:-26985916 | Msa0112350:CDS |
| TACCATCTTGAGTAACAAGA+GGG | 0.659131 | 1_3:+26992056 | None:intergenic |
| AACAGCACATGCTTAACATG+GGG | 0.671075 | 1_3:-26985940 | Msa0112350:CDS |
| TGTAGGGAAATAATTGGACA+GGG | 0.678502 | 1_3:+26986215 | None:intergenic |
| GATCTGATTGAGGAGCAGAA+GGG | 0.693678 | 1_3:+26992272 | None:intergenic |
| ACATCAGTAAAATCCGAGGG+AGG | 0.700474 | 1_3:+26986259 | None:intergenic |
| CAAACACACCTGTAAACATG+CGG | 0.714831 | 1_3:+26991048 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAAAAAAATTAAAAAA+AGG | - | chr1_3:26988495-26988514 | Msa0112350:intron | 0.0% |
| !! | ATTATTCATATTACTTAAAT+AGG | + | chr1_3:26989945-26989964 | None:intergenic | 10.0% |
| !!! | TTTTATTTTAGAATTTAATG+TGG | - | chr1_3:26992631-26992650 | Msa0112350:CDS | 10.0% |
| !! | TTATGCATAATTAAAAAATG+CGG | - | chr1_3:26987336-26987355 | Msa0112350:intron | 15.0% |
| !! | AAACATACTAATAAAATTCA+AGG | - | chr1_3:26987782-26987801 | Msa0112350:intron | 15.0% |
| !!! | GAATTGTTAATTTGTTAATT+GGG | + | chr1_3:26987881-26987900 | None:intergenic | 15.0% |
| !!! | AGAATTGTTAATTTGTTAAT+TGG | + | chr1_3:26987882-26987901 | None:intergenic | 15.0% |
| !! | TATAATTCACACTAAATAAA+AGG | + | chr1_3:26988297-26988316 | None:intergenic | 15.0% |
| !! | AAAAAATAGAAATGAAACTT+AGG | - | chr1_3:26988520-26988539 | Msa0112350:intron | 15.0% |
| !!! | TTAAAAATATTTTCTCACAT+AGG | + | chr1_3:26988910-26988929 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTATTCTTTTGG+TGG | - | chr1_3:26989485-26989504 | Msa0112350:intron | 15.0% |
| !!! | TTTTATTTTATTCTTTTGGT+GGG | - | chr1_3:26989486-26989505 | Msa0112350:intron | 15.0% |
| !! | ATTAAACAAAAACAAGATAA+AGG | + | chr1_3:26991374-26991393 | None:intergenic | 15.0% |
| !!! | CATAATCTAATTTTAACTTA+AGG | - | chr1_3:26991574-26991593 | Msa0112350:intron | 15.0% |
| !!! | TATTTTAAGTCGTAATTTTA+TGG | - | chr1_3:26991957-26991976 | Msa0112350:intron | 15.0% |
| !! | AGAATTACAAAATTTCAATT+AGG | + | chr1_3:26992606-26992625 | None:intergenic | 15.0% |
| !! | TTAACAAAGTTCATATCTTT+AGG | + | chr1_3:26986353-26986372 | None:intergenic | 20.0% |
| !! | TTAATCATTCAAGCTATATT+GGG | - | chr1_3:26986369-26986388 | Msa0112350:intron | 20.0% |
| !!! | TCGTTTTTAATAGAACATTA+TGG | - | chr1_3:26986635-26986654 | Msa0112350:intron | 20.0% |
| !!! | CCATTTTCTTAAATTATTAC+CGG | - | chr1_3:26986831-26986850 | Msa0112350:intron | 20.0% |
| !! | ATAATCAATCATTGTATAAC+TGG | - | chr1_3:26986914-26986933 | Msa0112350:intron | 20.0% |
| !!! | ATTTAAGTGTTTATTGACTA+TGG | - | chr1_3:26987054-26987073 | Msa0112350:intron | 20.0% |
| !!! | TGAATTTTGAGTAATGTTTA+AGG | + | chr1_3:26987699-26987718 | None:intergenic | 20.0% |
| !!! | TGTGACTTTTATTTCAAATT+AGG | + | chr1_3:26987731-26987750 | None:intergenic | 20.0% |
| !!! | TTCATTTAAAACCGTTTTAA+GGG | + | chr1_3:26988068-26988087 | None:intergenic | 20.0% |
| !!! | TTAAAACGGTTTTAAATGAA+GGG | - | chr1_3:26988068-26988087 | Msa0112350:intron | 20.0% |
| !! | GCAAATTTATAAGTATGATT+TGG | - | chr1_3:26988373-26988392 | Msa0112350:intron | 20.0% |
| !! | CTAATATAGAAATAAACCAT+AGG | + | chr1_3:26988582-26988601 | None:intergenic | 20.0% |
| !!! | ATTATCCAAATCATTTTACA+TGG | - | chr1_3:26988732-26988751 | Msa0112350:intron | 20.0% |
| !! | AAATACCATGTAAAATGATT+TGG | + | chr1_3:26988740-26988759 | None:intergenic | 20.0% |
| !!! | ATTTTACATGGTATTTAACT+GGG | - | chr1_3:26988744-26988763 | Msa0112350:intron | 20.0% |
| !!! | AGAAAATATTTTTAAGTGAG+TGG | - | chr1_3:26988915-26988934 | Msa0112350:intron | 20.0% |
| !! | TCTTTCTTCATAAAAAAAAC+TGG | + | chr1_3:26989019-26989038 | None:intergenic | 20.0% |
| !!! | TTTTTTTTATGAAGAAAGAC+TGG | - | chr1_3:26989020-26989039 | Msa0112350:intron | 20.0% |
| !! | AATTAATCCATGAAATACTT+GGG | + | chr1_3:26989131-26989150 | None:intergenic | 20.0% |
| !! | TAATTAATCCATGAAATACT+TGG | + | chr1_3:26989132-26989151 | None:intergenic | 20.0% |
| !! | TAAATAAATTACTCTAGACA+TGG | + | chr1_3:26989573-26989592 | None:intergenic | 20.0% |
| !! | TAAAGATGTTCATAAGATAT+AGG | - | chr1_3:26990217-26990236 | Msa0112350:intron | 20.0% |
| !! | ATATGGTATAATGAATACAA+TGG | + | chr1_3:26990945-26990964 | None:intergenic | 20.0% |
| !! | AGACTATTAATAAGAGTTAA+GGG | + | chr1_3:26990993-26991012 | None:intergenic | 20.0% |
| !! | AAGACTATTAATAAGAGTTA+AGG | + | chr1_3:26990994-26991013 | None:intergenic | 20.0% |
| !! | AAAAATTTATACAGTCTGTT+AGG | - | chr1_3:26991613-26991632 | Msa0112350:intron | 20.0% |
| ! | CCTTTAACATAAACAAAATC+TGG | + | chr1_3:26986092-26986111 | None:intergenic | 25.0% |
| !!! | CCAGATTTTGTTTATGTTAA+AGG | - | chr1_3:26986089-26986108 | Msa0112350:CDS | 25.0% |
| ! | GTTAATCATTCAAGCTATAT+TGG | - | chr1_3:26986368-26986387 | Msa0112350:intron | 25.0% |
| ! | CATTTGTCTAATAGTAATCA+AGG | - | chr1_3:26986442-26986461 | Msa0112350:intron | 25.0% |
| !! | TCTAATAGTAATCAAGGTTT+TGG | - | chr1_3:26986448-26986467 | Msa0112350:intron | 25.0% |
| ! | TTCCTTATTACAAAATTCAC+AGG | + | chr1_3:26986501-26986520 | None:intergenic | 25.0% |
| !! | TGTGAATTTTGTAATAAGGA+AGG | - | chr1_3:26986500-26986519 | Msa0112350:intron | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | + | chr1_3:26986574-26986593 | None:intergenic | 25.0% |
| ! | AAACTATAAGAGAAACTATC+AGG | - | chr1_3:26986578-26986597 | Msa0112350:intron | 25.0% |
| ! | CCGGTAATAATTTAAGAAAA+TGG | + | chr1_3:26986834-26986853 | None:intergenic | 25.0% |
| ! | TAAATTTCCATATGCTTTGA+TGG | - | chr1_3:26987086-26987105 | Msa0112350:intron | 25.0% |
| !!! | AGTTTGTTAGATACATTACA+AGG | + | chr1_3:26987247-26987266 | None:intergenic | 25.0% |
| ! | GCAATTTACAAGAAATTTAG+TGG | - | chr1_3:26987504-26987523 | Msa0112350:intron | 25.0% |
| !!! | TTTGTTACTTTAAGCTTTAG+AGG | + | chr1_3:26987824-26987843 | None:intergenic | 25.0% |
| !!! | TTGTTAATTTGTTAATTGGG+AGG | + | chr1_3:26987878-26987897 | None:intergenic | 25.0% |
| ! | TACAAAAATGACCCTTAAAA+CGG | - | chr1_3:26988054-26988073 | Msa0112350:intron | 25.0% |
| !!! | CTTCATTTAAAACCGTTTTA+AGG | + | chr1_3:26988069-26988088 | None:intergenic | 25.0% |
| !!! | CTTAAAACGGTTTTAAATGA+AGG | - | chr1_3:26988067-26988086 | Msa0112350:intron | 25.0% |
| ! | ATAAGTTAAGAATCTACTAG+TGG | - | chr1_3:26988454-26988473 | Msa0112350:intron | 25.0% |
| ! | GATACTATGTCATAATGAAA+AGG | - | chr1_3:26988707-26988726 | Msa0112350:intron | 25.0% |
| !! | CATTTTACATGGTATTTAAC+TGG | - | chr1_3:26988743-26988762 | Msa0112350:intron | 25.0% |
| ! | ATAAAAAAAACTGGAAAGGT+CGG | + | chr1_3:26989010-26989029 | None:intergenic | 25.0% |
| ! | CTTCATAAAAAAAACTGGAA+AGG | + | chr1_3:26989014-26989033 | None:intergenic | 25.0% |
| ! | ATGTACAAAAATGATATTCG+TGG | - | chr1_3:26989175-26989194 | Msa0112350:intron | 25.0% |
| !! | AAATTGTACTCGATACTTTT+AGG | - | chr1_3:26989277-26989296 | Msa0112350:intron | 25.0% |
| !!! | TACTTCTAAAATGGAAAATC+AGG | + | chr1_3:26989353-26989372 | None:intergenic | 25.0% |
| !! | AACAACTAGTACTTCTAAAA+TGG | + | chr1_3:26989362-26989381 | None:intergenic | 25.0% |
| ! | TTTCACCTTAAATAACAAAC+AGG | + | chr1_3:26989406-26989425 | None:intergenic | 25.0% |
| !! | TTTAAAATTGTGATGTCTGT+CGG | - | chr1_3:26989621-26989640 | Msa0112350:intron | 25.0% |
| ! | AGATTACTATAACTTATTCG+TGG | - | chr1_3:26989661-26989680 | Msa0112350:intron | 25.0% |
| !!! | GCTTTTTTCTTAAATAGAGA+AGG | - | chr1_3:26989837-26989856 | Msa0112350:intron | 25.0% |
| !! | TTAAGCCTATTTAGCTTAAA+AGG | - | chr1_3:26989873-26989892 | Msa0112350:intron | 25.0% |
| ! | TTCATATTACTTAAATAGGC+CGG | + | chr1_3:26989941-26989960 | None:intergenic | 25.0% |
| !! | TAAGATATAGGCTTTTAAAC+AGG | - | chr1_3:26990229-26990248 | Msa0112350:intron | 25.0% |
| !!! | GGTTAGGCTTTAAAAAAATA+TGG | - | chr1_3:26990327-26990346 | Msa0112350:intron | 25.0% |
| !! | TAATTGACTAGATTTTGCAT+TGG | - | chr1_3:26990446-26990465 | Msa0112350:intron | 25.0% |
| !!! | ATGTGTATATTGACTTTTAC+AGG | - | chr1_3:26990512-26990531 | Msa0112350:intron | 25.0% |
| ! | TTGAAAATACTAAAGAACAG+GGG | + | chr1_3:26990546-26990565 | None:intergenic | 25.0% |
| ! | GTTGAAAATACTAAAGAACA+GGG | + | chr1_3:26990547-26990566 | None:intergenic | 25.0% |
| ! | TGTTGAAAATACTAAAGAAC+AGG | + | chr1_3:26990548-26990567 | None:intergenic | 25.0% |
| !! | TTAGTATTTTCAACAGTACA+TGG | - | chr1_3:26990553-26990572 | Msa0112350:intron | 25.0% |
| ! | TTTCACTTGCAATAATAGTT+TGG | - | chr1_3:26990781-26990800 | Msa0112350:intron | 25.0% |
| !!! | TGGAATGATTTTTTAACACA+TGG | - | chr1_3:26990801-26990820 | Msa0112350:intron | 25.0% |
| !!! | TGGTGTAAAGTTTTTAAGTT+TGG | - | chr1_3:26990830-26990849 | Msa0112350:intron | 25.0% |
| ! | CTAATTCTACCATATTTGAA+GGG | - | chr1_3:26991032-26991051 | Msa0112350:intron | 25.0% |
| ! | TAATTCTACCATATTTGAAG+GGG | - | chr1_3:26991033-26991052 | Msa0112350:intron | 25.0% |
| ! | TGTATATTCATATCTCAATC+AGG | - | chr1_3:26991067-26991086 | Msa0112350:CDS | 25.0% |
| ! | AAGATTACATAAGATGGTTT+GGG | + | chr1_3:26991114-26991133 | None:intergenic | 25.0% |
| ! | TAATGGAAGATTACATAAGA+TGG | + | chr1_3:26991120-26991139 | None:intergenic | 25.0% |
| ! | GTTCTGATAGAGTAAAATAA+TGG | + | chr1_3:26991137-26991156 | None:intergenic | 25.0% |
| ! | ATAAGTAACAGGATATCTAA+TGG | + | chr1_3:26991159-26991178 | None:intergenic | 25.0% |
| !! | TGCAGGATAAATATTTTATG+TGG | + | chr1_3:26991240-26991259 | None:intergenic | 25.0% |
| ! | AAATATTTATCCTGCATCTT+AGG | - | chr1_3:26991244-26991263 | Msa0112350:intron | 25.0% |
| ! | AATATTTATCCTGCATCTTA+GGG | - | chr1_3:26991245-26991264 | Msa0112350:intron | 25.0% |
| ! | CATAAATAGCAACTACTTTA+CGG | + | chr1_3:26991324-26991343 | None:intergenic | 25.0% |
| !!! | AAGATTTGCTTAACGTTTTT+AGG | + | chr1_3:26991474-26991493 | None:intergenic | 25.0% |
| ! | TAACACATTTGTAAGGTTTA+GGG | + | chr1_3:26991651-26991670 | None:intergenic | 25.0% |
| ! | ATAACACATTTGTAAGGTTT+AGG | + | chr1_3:26991652-26991671 | None:intergenic | 25.0% |
| ! | CCTATTATAACACATTTGTA+AGG | + | chr1_3:26991658-26991677 | None:intergenic | 25.0% |
| ! | CCTTACAAATGTGTTATAAT+AGG | - | chr1_3:26991655-26991674 | Msa0112350:intron | 25.0% |
| ! | TAATAGGAAACACAGATATA+AGG | - | chr1_3:26991671-26991690 | Msa0112350:intron | 25.0% |
| ! | AATCTTTCAATGACTATGAT+TGG | + | chr1_3:26991874-26991893 | None:intergenic | 25.0% |
| !! | TTTATGGAGTTTTGCATTTT+AGG | - | chr1_3:26991973-26991992 | Msa0112350:intron | 25.0% |
| !! | TTATGACTGTCTTGTTAAAT+TGG | + | chr1_3:26992092-26992111 | None:intergenic | 25.0% |
| !! | TTTGATAACATGATTCATAG+TGG | - | chr1_3:26992180-26992199 | Msa0112350:CDS | 25.0% |
| ! | AATAGAAAAAGAAACCCAAA+AGG | - | chr1_3:26992490-26992509 | Msa0112350:CDS | 25.0% |
| ! | TAGAATTTAATGTGGCTATA+TGG | - | chr1_3:26992639-26992658 | Msa0112350:CDS | 25.0% |
| ! | AACAAACATATCATGCTATA+TGG | + | chr1_3:26992669-26992688 | None:intergenic | 25.0% |
| ! | TGAAGAAGATATTGGTTAAG+AGG | + | chr1_3:26985966-26985985 | None:intergenic | 30.0% |
| TGCTAAGAATGTTCATGTTA+TGG | - | chr1_3:26986061-26986080 | Msa0112350:CDS | 30.0% | |
| GCTAAGAATGTTCATGTTAT+GGG | - | chr1_3:26986062-26986081 | Msa0112350:CDS | 30.0% | |
| ! | TCTGATGTTGAAATCTTTTC+TGG | - | chr1_3:26986292-26986311 | Msa0112350:CDS | 30.0% |
| ! | CTGATGTTGAAATCTTTTCT+GGG | - | chr1_3:26986293-26986312 | Msa0112350:CDS | 30.0% |
| ! | GACCTGTGAATTTTGTAATA+AGG | - | chr1_3:26986496-26986515 | Msa0112350:intron | 30.0% |
| TATAAGAGAAACTATCAGGA+AGG | - | chr1_3:26986582-26986601 | Msa0112350:intron | 30.0% | |
| ATGTAGTCAATACAACTTAG+TGG | - | chr1_3:26986671-26986690 | Msa0112350:intron | 30.0% | |
| TGTAGTCAATACAACTTAGT+GGG | - | chr1_3:26986672-26986691 | Msa0112350:intron | 30.0% | |
| ! | TTCTAGTAGTCATAAGCTTT+TGG | - | chr1_3:26986713-26986732 | Msa0112350:intron | 30.0% |
| TGTACATGCTTAACTATTTG+TGG | - | chr1_3:26986948-26986967 | Msa0112350:intron | 30.0% | |
| GTACATGCTTAACTATTTGT+GGG | - | chr1_3:26986949-26986968 | Msa0112350:intron | 30.0% | |
| TTTACTATCTACTCACTTAG+AGG | - | chr1_3:26986996-26987015 | Msa0112350:intron | 30.0% | |
| AAACCAGGATCAACAATAAT+GGG | + | chr1_3:26987133-26987152 | None:intergenic | 30.0% | |
| TTCACTATCCCAAAATTGTT+CGG | + | chr1_3:26987412-26987431 | None:intergenic | 30.0% | |
| !!! | AGGAGATGGATTTTTTTTGT+TGG | - | chr1_3:26987956-26987975 | Msa0112350:intron | 30.0% |
| ! | GAAATCTAGTATTTTGCACA+GGG | - | chr1_3:26988090-26988109 | Msa0112350:intron | 30.0% |
| !!! | GATTAGTGTTTTGAGTTCTA+TGG | - | chr1_3:26988414-26988433 | Msa0112350:intron | 30.0% |
| TAAAAAAAACTGGAAAGGTC+GGG | + | chr1_3:26989009-26989028 | None:intergenic | 30.0% | |
| AAACTATTACCAACCAAAAG+AGG | + | chr1_3:26989055-26989074 | None:intergenic | 30.0% | |
| AATATTCTTTGTCTAGTTGC+TGG | - | chr1_3:26989233-26989252 | Msa0112350:intron | 30.0% | |
| !! | TACTTTTAGGTGAATGGTTA+AGG | - | chr1_3:26989290-26989309 | Msa0112350:intron | 30.0% |
| TAAAATGGAAAATCAGGAAG+GGG | + | chr1_3:26989347-26989366 | None:intergenic | 30.0% | |
| CTAAAATGGAAAATCAGGAA+GGG | + | chr1_3:26989348-26989367 | None:intergenic | 30.0% | |
| ! | TCTAAAATGGAAAATCAGGA+AGG | + | chr1_3:26989349-26989368 | None:intergenic | 30.0% |
| ! | TTTAAGGTGAAATCTATGCT+AGG | - | chr1_3:26989414-26989433 | Msa0112350:intron | 30.0% |
| TGCTAACAATCAGATTATTG+TGG | - | chr1_3:26989457-26989476 | Msa0112350:intron | 30.0% | |
| CTCTATTTAAGAAAAAAGCC+TGG | + | chr1_3:26989836-26989855 | None:intergenic | 30.0% | |
| ATAGGCTTAAAAAAAAGCCT+AGG | + | chr1_3:26989863-26989882 | None:intergenic | 30.0% | |
| CAATGTGATCGAAGTTTAAA+TGG | + | chr1_3:26990191-26990210 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTAAAGCCTAACCC+TGG | + | chr1_3:26990326-26990345 | None:intergenic | 30.0% |
| !! | AGGCTTTAAAAAAATATGGC+AGG | - | chr1_3:26990331-26990350 | Msa0112350:intron | 30.0% |
| ! | TTGCACAACACAGAAAATTT+TGG | - | chr1_3:26990623-26990642 | Msa0112350:intron | 30.0% |
| ACTATCAGTAAACAAGAAAG+TGG | - | chr1_3:26990723-26990742 | Msa0112350:intron | 30.0% | |
| ! | TTTTTAACACATGGCACAAA+TGG | - | chr1_3:26990810-26990829 | Msa0112350:intron | 30.0% |
| TACTACAACGACAAAACAAA+GGG | - | chr1_3:26990877-26990896 | Msa0112350:intron | 30.0% | |
| ACAATGGCAAACTAGAATTA+AGG | + | chr1_3:26990929-26990948 | None:intergenic | 30.0% | |
| TATACCATATCGTAGATTCA+AGG | - | chr1_3:26990955-26990974 | Msa0112350:intron | 30.0% | |
| CCTTCAAATATGGTAGAATT+AGG | + | chr1_3:26991034-26991053 | None:intergenic | 30.0% | |
| CCTAATTCTACCATATTTGA+AGG | - | chr1_3:26991031-26991050 | Msa0112350:intron | 30.0% | |
| GAAGATTACATAAGATGGTT+TGG | + | chr1_3:26991115-26991134 | None:intergenic | 30.0% | |
| AAATGATGCAATAGACAAGT+AGG | + | chr1_3:26991183-26991202 | None:intergenic | 30.0% | |
| TTATACAGTCTGTTAGGTAT+CGG | - | chr1_3:26991619-26991638 | Msa0112350:intron | 30.0% | |
| TATTCAGTGTCTATTCTGTT+AGG | - | chr1_3:26991717-26991736 | Msa0112350:intron | 30.0% | |
| ATCATCTTCTGTAATAGTTC+TGG | - | chr1_3:26991805-26991824 | Msa0112350:intron | 30.0% | |
| AATACATCAGTAAAATCCGA+GGG | + | chr1_3:26992011-26992030 | None:intergenic | 30.0% | |
| AAATACATCAGTAAAATCCG+AGG | + | chr1_3:26992012-26992031 | None:intergenic | 30.0% | |
| TAACAAGACAGTCATAAATC+AGG | - | chr1_3:26992095-26992114 | Msa0112350:CDS | 30.0% | |
| TCAAAATCTGTTGAATTGAG+TGG | + | chr1_3:26992165-26992184 | None:intergenic | 30.0% | |
| !!! | CTGGAATTTTTTTGCAAAGA+CGG | + | chr1_3:26992208-26992227 | None:intergenic | 30.0% |
| !!! | GACTTCGGTTCAAAATTTTT+TGG | + | chr1_3:26992260-26992279 | None:intergenic | 30.0% |
| ATTGTTGAATTGCTGTCAAA+TGG | - | chr1_3:26992399-26992418 | Msa0112350:CDS | 30.0% | |
| TTGTTACATTATGTGACATG+AGG | + | chr1_3:26992470-26992489 | None:intergenic | 30.0% | |
| AGTTTGTGTGACAACATTTA+AGG | + | chr1_3:26992696-26992715 | None:intergenic | 30.0% | |
| ACAACACAACATGAGATCAA+AGG | - | chr1_3:26985538-26985557 | Msa0112350:three_prime_UTR | 35.0% | |
| CAAAGGAACAATCATCATAG+AGG | - | chr1_3:26985555-26985574 | Msa0112350:three_prime_UTR | 35.0% | |
| ATCATCACAATGCAAAATCC+AGG | - | chr1_3:26985600-26985619 | Msa0112350:three_prime_UTR | 35.0% | |
| !!! | CATTGTGGTTTTGTTGTTGT+TGG | + | chr1_3:26985642-26985661 | None:intergenic | 35.0% |
| GAAAGTGAAGAAGAACATTG+TGG | + | chr1_3:26985657-26985676 | None:intergenic | 35.0% | |
| ! | TGGTTTAGGGTCTTTGATTA+AGG | + | chr1_3:26985694-26985713 | None:intergenic | 35.0% |
| !!! | AGAGGATTGGTTTTGGTTTA+GGG | + | chr1_3:26985707-26985726 | None:intergenic | 35.0% |
| !!! | TAGAGGATTGGTTTTGGTTT+AGG | + | chr1_3:26985708-26985727 | None:intergenic | 35.0% |
| !!! | AATGTGTAGAGGATTGGTTT+TGG | + | chr1_3:26985714-26985733 | None:intergenic | 35.0% |
| GGTCAAGATGAAGAAGATAT+TGG | + | chr1_3:26985974-26985993 | None:intergenic | 35.0% | |
| ! | AACTTTTCACGATCTGATTG+AGG | + | chr1_3:26986005-26986024 | None:intergenic | 35.0% |
| TCAATCAGATCGTGAAAAGT+TGG | - | chr1_3:26986004-26986023 | Msa0112350:CDS | 35.0% | |
| ! | TGATTCGTTTGTCTTTGAGA+TGG | - | chr1_3:26986153-26986172 | Msa0112350:CDS | 35.0% |
| !! | GATTCGTTTGTCTTTGAGAT+GGG | - | chr1_3:26986154-26986173 | Msa0112350:CDS | 35.0% |
| TACCATCTTGAGTAACAAGA+GGG | + | chr1_3:26986211-26986230 | None:intergenic | 35.0% | |
| ATACCATCTTGAGTAACAAG+AGG | + | chr1_3:26986212-26986231 | None:intergenic | 35.0% | |
| TCTTGTTACTCAAGATGGTA+TGG | - | chr1_3:26986211-26986230 | Msa0112350:CDS | 35.0% | |
| TTACTCAAGATGGTATGGTA+TGG | - | chr1_3:26986216-26986235 | Msa0112350:CDS | 35.0% | |
| ATCATTCAAGCTATATTGGG+TGG | - | chr1_3:26986372-26986391 | Msa0112350:intron | 35.0% | |
| ! | GCTTTTGGTATTTAGTGTAC+CGG | - | chr1_3:26986728-26986747 | Msa0112350:intron | 35.0% |
| ! | CTACTTGTTAGTGTAGTATC+CGG | - | chr1_3:26986857-26986876 | Msa0112350:intron | 35.0% |
| TGCTTAACTATTTGTGGGTT+TGG | - | chr1_3:26986954-26986973 | Msa0112350:intron | 35.0% | |
| ! | TCAATCACAAGGTTTTGCAT+TGG | - | chr1_3:26987021-26987040 | Msa0112350:intron | 35.0% |
| ! | CAATCACAAGGTTTTGCATT+GGG | - | chr1_3:26987022-26987041 | Msa0112350:intron | 35.0% |
| AAACCCATTATTGTTGATCC+TGG | - | chr1_3:26987127-26987146 | Msa0112350:intron | 35.0% | |
| CAAACCAGGATCAACAATAA+TGG | + | chr1_3:26987134-26987153 | None:intergenic | 35.0% | |
| ! | CTGGTTTGTATCTTTCTGAA+GGG | - | chr1_3:26987146-26987165 | Msa0112350:intron | 35.0% |
| TGACGTACTCTTGAATAAGA+TGG | + | chr1_3:26987309-26987328 | None:intergenic | 35.0% | |
| ! | TATCAGATGCCGAACAATTT+TGG | - | chr1_3:26987400-26987419 | Msa0112350:intron | 35.0% |
| ! | ATCAGATGCCGAACAATTTT+GGG | - | chr1_3:26987401-26987420 | Msa0112350:intron | 35.0% |
| TGAAATCAAGAGATGAAGAG+AGG | - | chr1_3:26987901-26987920 | Msa0112350:intron | 35.0% | |
| GTGGAGAAGAGTAATAGTTA+GGG | - | chr1_3:26988021-26988040 | Msa0112350:intron | 35.0% | |
| ! | GGAAATCTAGTATTTTGCAC+AGG | - | chr1_3:26988089-26988108 | Msa0112350:intron | 35.0% |
| ACTACATCTGTTGTCAATAG+CGG | + | chr1_3:26988268-26988287 | None:intergenic | 35.0% | |
| ! | ATGATTTGGCTAAGACTGTT+TGG | - | chr1_3:26988387-26988406 | Msa0112350:intron | 35.0% |
| ! | TGATTTGGCTAAGACTGTTT+GGG | - | chr1_3:26988388-26988407 | Msa0112350:intron | 35.0% |
| GAATCTACTAGTGGTTTGAT+TGG | - | chr1_3:26988463-26988482 | Msa0112350:intron | 35.0% | |
| TCTCTAAGTGATCATACCTA+TGG | - | chr1_3:26988563-26988582 | Msa0112350:intron | 35.0% | |
| AATTCCTGCTCAGAATTCTT+AGG | - | chr1_3:26988630-26988649 | Msa0112350:intron | 35.0% | |
| ACTCACCATATCCTATATAG+GGG | + | chr1_3:26988656-26988675 | None:intergenic | 35.0% | |
| GACTCACCATATCCTATATA+GGG | + | chr1_3:26988657-26988676 | None:intergenic | 35.0% | |
| !!! | ATATTTTTAAGTGAGTGGCC+TGG | - | chr1_3:26988920-26988939 | Msa0112350:intron | 35.0% |
| CTCACTTATCTACCAAAAGA+GGG | + | chr1_3:26988952-26988971 | None:intergenic | 35.0% | |
| TCTCACTTATCTACCAAAAG+AGG | + | chr1_3:26988953-26988972 | None:intergenic | 35.0% | |
| ACAATAAGTTCATACAGCCA+AGG | + | chr1_3:26988979-26988998 | None:intergenic | 35.0% | |
| ! | TTTGTAGTACCTCTTTTGGT+TGG | - | chr1_3:26989043-26989062 | Msa0112350:intron | 35.0% |
| !! | TTGGTTGGTAATAGTTTGCA+AGG | - | chr1_3:26989058-26989077 | Msa0112350:intron | 35.0% |
| ! | CTAAGACTCCAAGAATTTTC+AGG | + | chr1_3:26989084-26989103 | None:intergenic | 35.0% |
| !! | ACTCGATACTTTTAGGTGAA+TGG | - | chr1_3:26989284-26989303 | Msa0112350:intron | 35.0% |
| ACTAAGTATGCGTTTGAAAG+TGG | - | chr1_3:26989318-26989337 | Msa0112350:intron | 35.0% | |
| !! | TCGGACCTGTTTGTTATTTA+AGG | - | chr1_3:26989398-26989417 | Msa0112350:intron | 35.0% |
| !! | TTTATTCTTTTGGTGGGTAG+AGG | - | chr1_3:26989492-26989511 | Msa0112350:intron | 35.0% |
| ! | TTTTTGCCACTAGTGTGTTT+GGG | - | chr1_3:26989724-26989743 | Msa0112350:intron | 35.0% |
| AGTGTGTTTGGGAAGTAAAT+TGG | - | chr1_3:26989735-26989754 | Msa0112350:intron | 35.0% | |
| ! | AAATTGGCCTACTTGATGTT+AGG | - | chr1_3:26989751-26989770 | Msa0112350:intron | 35.0% |
| ! | AATTGGCCTACTTGATGTTA+GGG | - | chr1_3:26989752-26989771 | Msa0112350:intron | 35.0% |
| TTCTTAAATAGAGAAGGCCT+AGG | - | chr1_3:26989843-26989862 | Msa0112350:intron | 35.0% | |
| ! | ATAATCAACGCGAGGTTTTA+GGG | + | chr1_3:26990127-26990146 | None:intergenic | 35.0% |
| TTAAAAAAATATGGCAGGCC+AGG | - | chr1_3:26990336-26990355 | Msa0112350:intron | 35.0% | |
| ! | TGACTAGATTTTGCATTGGA+AGG | - | chr1_3:26990450-26990469 | Msa0112350:intron | 35.0% |
| ! | GACTAGATTTTGCATTGGAA+GGG | - | chr1_3:26990451-26990470 | Msa0112350:intron | 35.0% |
| AATACTAAAGAACAGGGGAA+TGG | + | chr1_3:26990541-26990560 | None:intergenic | 35.0% | |
| CAATCAAAGAGAAATCTCAG+AGG | + | chr1_3:26990606-26990625 | None:intergenic | 35.0% | |
| CTACTACAACGACAAAACAA+AGG | - | chr1_3:26990876-26990895 | Msa0112350:intron | 35.0% | |
| GGTAATTAACTCCACTTGAT+GGG | + | chr1_3:26990908-26990927 | None:intergenic | 35.0% | |
| AGGTAATTAACTCCACTTGA+TGG | + | chr1_3:26990909-26990928 | None:intergenic | 35.0% | |
| !! | TATTTAGTGCCCAGTTTTGT+AGG | - | chr1_3:26991204-26991223 | Msa0112350:intron | 35.0% |
| CATAGAATGCCTACAAAACT+GGG | + | chr1_3:26991216-26991235 | None:intergenic | 35.0% | |
| TCATAGAATGCCTACAAAAC+TGG | + | chr1_3:26991217-26991236 | None:intergenic | 35.0% | |
| !!! | TGCTTAACGTTTTTAGGTGA+CGG | + | chr1_3:26991468-26991487 | None:intergenic | 35.0% |
| GCAAATCTTTATGTCCTGTT+TGG | - | chr1_3:26991485-26991504 | Msa0112350:intron | 35.0% | |
| TATACAGTCTGTTAGGTATC+GGG | - | chr1_3:26991620-26991639 | Msa0112350:intron | 35.0% | |
| GAATAATTCCTACCATGTCA+TGG | + | chr1_3:26991702-26991721 | None:intergenic | 35.0% | |
| AGAGAGTTATCTCTTCTTTG+AGG | - | chr1_3:26991758-26991777 | Msa0112350:intron | 35.0% | |
| AAATAATTGGACAGGGATGA+TGG | + | chr1_3:26992045-26992064 | None:intergenic | 35.0% | |
| TGTAGGGAAATAATTGGACA+GGG | + | chr1_3:26992052-26992071 | None:intergenic | 35.0% | |
| GAGAACTGTAGGGAAATAAT+TGG | + | chr1_3:26992058-26992077 | None:intergenic | 35.0% | |
| ! | AAAATTTTGAACCGAAGTCC+TGG | - | chr1_3:26992261-26992280 | Msa0112350:CDS | 35.0% |
| CCTATATACATTGTCGAGAT+CGG | + | chr1_3:26992431-26992450 | None:intergenic | 35.0% | |
| TCTCGACAATGTATATAGGA+AGG | - | chr1_3:26992432-26992451 | Msa0112350:CDS | 35.0% | |
| ! | TCGTTCTTATCGATCCTTTT+GGG | + | chr1_3:26992507-26992526 | None:intergenic | 35.0% |
| ! | ATCGTTCTTATCGATCCTTT+TGG | + | chr1_3:26992508-26992527 | None:intergenic | 35.0% |
| AACGATATGAATCAACTGCT+TGG | - | chr1_3:26992522-26992541 | Msa0112350:CDS | 35.0% | |
| TTGGTCCTTAGTTTATCTAG+TGG | - | chr1_3:26992541-26992560 | Msa0112350:CDS | 35.0% | |
| TGGTCCTTAGTTTATCTAGT+GGG | - | chr1_3:26992542-26992561 | Msa0112350:CDS | 35.0% | |
| AAATGTTGTCACACAAACTC+TGG | - | chr1_3:26992697-26992716 | Msa0112350:five_prime_UTR | 35.0% | |
| GTTGTGTTGTGTTGTGTGTT+TGG | + | chr1_3:26985528-26985547 | None:intergenic | 40.0% | |
| GAAATGAGGTATGCTATGGA+AGG | + | chr1_3:26985888-26985907 | None:intergenic | 40.0% | |
| TCCATAGCATACCTCATTTC+CGG | - | chr1_3:26985888-26985907 | Msa0112350:CDS | 40.0% | |
| GCATGAAGAGTAAACGAAAC+AGG | + | chr1_3:26986122-26986141 | None:intergenic | 40.0% | |
| !! | GTTTGTCTTTGAGATGGGAT+TGG | - | chr1_3:26986159-26986178 | Msa0112350:CDS | 40.0% |
| TACCCTCTTGTTACTCAAGA+TGG | - | chr1_3:26986206-26986225 | Msa0112350:CDS | 40.0% | |
| AAGGAGAGTAGATCAGAAAG+AGG | - | chr1_3:26986519-26986538 | Msa0112350:intron | 40.0% | |
| AGGAGAGTAGATCAGAAAGA+GGG | - | chr1_3:26986520-26986539 | Msa0112350:intron | 40.0% | |
| GGATCTAGAGACTAATGAGT+TGG | - | chr1_3:26986603-26986622 | Msa0112350:intron | 40.0% | |
| TCTTCTTCAATGTGAAGTGC+CGG | + | chr1_3:26986750-26986769 | None:intergenic | 40.0% | |
| AGTAAACACATGTGTCGTGT+CGG | + | chr1_3:26986800-26986819 | None:intergenic | 40.0% | |
| CTACACTAACAAGTAGACAC+CGG | + | chr1_3:26986853-26986872 | None:intergenic | 40.0% | |
| ACTTAGAGGAGTCAATCACA+AGG | - | chr1_3:26987010-26987029 | Msa0112350:intron | 40.0% | |
| ! | TCCATATGCTTTGATGGTCT+AGG | - | chr1_3:26987092-26987111 | Msa0112350:intron | 40.0% |
| ACCTAGACCATCAAAGCATA+TGG | + | chr1_3:26987096-26987115 | None:intergenic | 40.0% | |
| CCTTCAGAAAGATACAAACC+AGG | + | chr1_3:26987148-26987167 | None:intergenic | 40.0% | |
| ! | CCTGGTTTGTATCTTTCTGA+AGG | - | chr1_3:26987145-26987164 | Msa0112350:intron | 40.0% |
| TAAACATGCGGTAAGCACTA+GGG | + | chr1_3:26987207-26987226 | None:intergenic | 40.0% | |
| CAAACACACCTGTAAACATG+CGG | + | chr1_3:26987219-26987238 | None:intergenic | 40.0% | |
| ATTGTTCGGCATCTGATATC+AGG | + | chr1_3:26987398-26987417 | None:intergenic | 40.0% | |
| GGATAGTGAAAATAGCGTCT+TGG | - | chr1_3:26987422-26987441 | Msa0112350:intron | 40.0% | |
| ! | ATGTAGCTCTGTTGTCAAAG+CGG | - | chr1_3:26987535-26987554 | Msa0112350:intron | 40.0% |
| !! | GCTTTAGAGGCTTAAAGTGT+CGG | + | chr1_3:26987811-26987830 | None:intergenic | 40.0% |
| TGAAGAGAGGAGAACAAAGA+TGG | - | chr1_3:26987914-26987933 | Msa0112350:intron | 40.0% | |
| GAAGAGAGGAGAACAAAGAT+GGG | - | chr1_3:26987915-26987934 | Msa0112350:intron | 40.0% | |
| CGATGAAGAAGTTGAGTTTG+TGG | - | chr1_3:26987981-26988000 | Msa0112350:intron | 40.0% | |
| TGAGTTTGTGGCTGTGTATT+TGG | - | chr1_3:26987993-26988012 | Msa0112350:intron | 40.0% | |
| GGTGGAGAAGAGTAATAGTT+AGG | - | chr1_3:26988020-26988039 | Msa0112350:intron | 40.0% | |
| ! | AGTTCTATGGAGACTAGCTA+GGG | - | chr1_3:26988427-26988446 | Msa0112350:intron | 40.0% |
| GAATTCTTAGGCCCCTATAT+AGG | - | chr1_3:26988642-26988661 | Msa0112350:intron | 40.0% | |
| TTAGGCCCCTATATAGGATA+TGG | - | chr1_3:26988648-26988667 | Msa0112350:intron | 40.0% | |
| GGACTCACCATATCCTATAT+AGG | + | chr1_3:26988658-26988677 | None:intergenic | 40.0% | |
| ACTAGGTGGCATTATTGATC+AGG | + | chr1_3:26988840-26988859 | None:intergenic | 40.0% | |
| TGATCAATAATGCCACCTAG+TGG | - | chr1_3:26988839-26988858 | Msa0112350:intron | 40.0% | |
| GTAGATAAGTGAGATGACCT+TGG | - | chr1_3:26988959-26988978 | Msa0112350:intron | 40.0% | |
| !! | CTGGTTTGTAGTACCTCTTT+TGG | - | chr1_3:26989039-26989058 | Msa0112350:intron | 40.0% |
| TTGCAAGGCCTGAAAATTCT+TGG | - | chr1_3:26989073-26989092 | Msa0112350:intron | 40.0% | |
| CATGAAATACTTGGGCACTA+AGG | + | chr1_3:26989123-26989142 | None:intergenic | 40.0% | |
| CTTAGTGCCCAAGTATTTCA+TGG | - | chr1_3:26989121-26989140 | Msa0112350:intron | 40.0% | |
| GCATTGCTGTCAACATTTCA+AGG | + | chr1_3:26989440-26989459 | None:intergenic | 40.0% | |
| ! | GTAGAAGCACAAGTGTGATT+TGG | - | chr1_3:26989532-26989551 | Msa0112350:intron | 40.0% |
| CCATTTAGTCAACTATGCAG+TGG | + | chr1_3:26989690-26989709 | None:intergenic | 40.0% | |
| CCACTGCATAGTTGACTAAA+TGG | - | chr1_3:26989687-26989706 | Msa0112350:intron | 40.0% | |
| ! | CTTTTTGCCACTAGTGTGTT+TGG | - | chr1_3:26989723-26989742 | Msa0112350:intron | 40.0% |
| TTACTTCCCAAACACACTAG+TGG | + | chr1_3:26989733-26989752 | None:intergenic | 40.0% | |
| TTGATGTTAGGGATGGGAAT+AGG | - | chr1_3:26989763-26989782 | Msa0112350:intron | 40.0% | |
| TTTAAGAAAAAAGCCTGGCC+TGG | + | chr1_3:26989831-26989850 | None:intergenic | 40.0% | |
| !! | CCTGGCCTTTTAAGCTAAAT+AGG | + | chr1_3:26989881-26989900 | None:intergenic | 40.0% |
| ! | CCTATTTAGCTTAAAAGGCC+AGG | - | chr1_3:26989878-26989897 | Msa0112350:intron | 40.0% |
| AAAAGCCTCTTAAGCCTGTT+AGG | - | chr1_3:26989915-26989934 | Msa0112350:intron | 40.0% | |
| ! | GATAATCAACGCGAGGTTTT+AGG | + | chr1_3:26990128-26990147 | None:intergenic | 40.0% |
| !! | CTCTTTTGATAATCAACGCG+AGG | + | chr1_3:26990135-26990154 | None:intergenic | 40.0% |
| ! | AGGCTTTTAAACAGGCTAGT+AGG | - | chr1_3:26990237-26990256 | Msa0112350:intron | 40.0% |
| !!! | CTGTCATAGGCCTACTTTTT+AGG | + | chr1_3:26990295-26990314 | None:intergenic | 40.0% |
| CTAAAAAGTAGGCCTATGAC+AGG | - | chr1_3:26990293-26990312 | Msa0112350:intron | 40.0% | |
| CGAATACATCAAGTAGGGAT+GGG | + | chr1_3:26990399-26990418 | None:intergenic | 40.0% | |
| TCGAATACATCAAGTAGGGA+TGG | + | chr1_3:26990400-26990419 | None:intergenic | 40.0% | |
| AGGGTCGAATACATCAAGTA+GGG | + | chr1_3:26990404-26990423 | None:intergenic | 40.0% | |
| AAAGGGTAATACCCATCAAG+TGG | - | chr1_3:26990894-26990913 | Msa0112350:intron | 40.0% | |
| CAACAATGCCCCTTCAAATA+TGG | + | chr1_3:26991044-26991063 | None:intergenic | 40.0% | |
| GACAAGTAGGCATAAGTAAC+AGG | + | chr1_3:26991170-26991189 | None:intergenic | 40.0% | |
| TGAGCAAAACACGTAAGAGA+AGG | + | chr1_3:26991288-26991307 | None:intergenic | 40.0% | |
| ! | GTTTTGCTCATCACGATTGA+TGG | - | chr1_3:26991298-26991317 | Msa0112350:intron | 40.0% |
| TGCTAGAAGCTAATCCAAAC+AGG | + | chr1_3:26991502-26991521 | None:intergenic | 40.0% | |
| !! | GATTAGCTTCTAGCATACAG+TGG | - | chr1_3:26991507-26991526 | Msa0112350:intron | 40.0% |
| TATAAGGAGAGACCATGACA+TGG | - | chr1_3:26991687-26991706 | Msa0112350:intron | 40.0% | |
| TCTGTTAGGACCTTACAAGT+TGG | - | chr1_3:26991731-26991750 | Msa0112350:intron | 40.0% | |
| CTGTTAGGACCTTACAAGTT+GGG | - | chr1_3:26991732-26991751 | Msa0112350:intron | 40.0% | |
| ! | GAGTTATCTCTTCTTTGAGG+TGG | - | chr1_3:26991761-26991780 | Msa0112350:intron | 40.0% |
| !! | GACTTGTTCTTTTCTTCTGC+AGG | - | chr1_3:26991922-26991941 | Msa0112350:CDS | 40.0% |
| CTGTAGGGAAATAATTGGAC+AGG | + | chr1_3:26992053-26992072 | None:intergenic | 40.0% | |
| !! | GTGGTCGAAGATTGTTTCTA+TGG | + | chr1_3:26992146-26992165 | None:intergenic | 40.0% |
| GAACAGCACATGCTTAACAT+GGG | - | chr1_3:26992323-26992342 | Msa0112350:CDS | 40.0% | |
| AACAGCACATGCTTAACATG+GGG | - | chr1_3:26992324-26992343 | Msa0112350:CDS | 40.0% | |
| CCGATCTCGACAATGTATAT+AGG | - | chr1_3:26992428-26992447 | Msa0112350:CDS | 40.0% | |
| TACATTATGTGACATGAGGC+TGG | + | chr1_3:26992466-26992485 | None:intergenic | 40.0% | |
| GGTCCTTAGTTTATCTAGTG+GGG | - | chr1_3:26992543-26992562 | Msa0112350:CDS | 40.0% | |
| CTACCCCACTAGATAAACTA+AGG | + | chr1_3:26992549-26992568 | None:intergenic | 40.0% | |
| TGGGGTAGCAAGTTAAGTAT+GGG | - | chr1_3:26992561-26992580 | Msa0112350:CDS | 40.0% | |
| ! | GGTGATGTTGTTGTTGTTCC+TGG | + | chr1_3:26985621-26985640 | None:intergenic | 45.0% |
| GCTAGGAATGTGTAGAGGAT+TGG | + | chr1_3:26985720-26985739 | None:intergenic | 45.0% | |
| ! | AGAGTGCTAGGAATGTGTAG+AGG | + | chr1_3:26985725-26985744 | None:intergenic | 45.0% |
| GATGGGTCGGGTAAAGAAAT+GGG | + | chr1_3:26985818-26985837 | None:intergenic | 45.0% | |
| ! | TGATGGGTCGGGTAAAGAAA+TGG | + | chr1_3:26985819-26985838 | None:intergenic | 45.0% |
| TGTCTTGGTCGTAGATGATG+CGG | + | chr1_3:26985848-26985867 | None:intergenic | 45.0% | |
| ATGAGGTATGCTATGGAAGG+TGG | + | chr1_3:26985885-26985904 | None:intergenic | 45.0% | |
| CCATAGCATACCTCATTTCC+GGG | - | chr1_3:26985889-26985908 | Msa0112350:CDS | 45.0% | |
| ATACCTCATTTCCGGGTCAA+AGG | - | chr1_3:26985896-26985915 | Msa0112350:CDS | 45.0% | |
| TACCTCATTTCCGGGTCAAA+GGG | - | chr1_3:26985897-26985916 | Msa0112350:CDS | 45.0% | |
| AAGTTGCAGACAGTAGCCTA+AGG | + | chr1_3:26985938-26985957 | None:intergenic | 45.0% | |
| GATCTGATTGAGGAGCAGAA+GGG | + | chr1_3:26985995-26986014 | None:intergenic | 45.0% | |
| TAGGCAGAAACGACATGATG+TGG | + | chr1_3:26986334-26986353 | None:intergenic | 45.0% | |
| GGAGAGTAGATCAGAAAGAG+GGG | - | chr1_3:26986521-26986540 | Msa0112350:intron | 45.0% | |
| ! | TGCTTTGATGGTCTAGGTCA+AGG | - | chr1_3:26987098-26987117 | Msa0112350:intron | 45.0% |
| GTAAACATGCGGTAAGCACT+AGG | + | chr1_3:26987208-26987227 | None:intergenic | 45.0% | |
| AGTGCTTACCGCATGTTTAC+AGG | - | chr1_3:26987208-26987227 | Msa0112350:intron | 45.0% | |
| CGCATGTTTACAGGTGTGTT+TGG | - | chr1_3:26987217-26987236 | Msa0112350:intron | 45.0% | |
| CTGTTGTCAAAGCGGAAATG+CGG | - | chr1_3:26987543-26987562 | Msa0112350:intron | 45.0% | |
| !! | GGTTCTGAGATGATGAGAAG+AGG | - | chr1_3:26987936-26987955 | Msa0112350:intron | 45.0% |
| GAGATGATGAGAAGAGGAGA+TGG | - | chr1_3:26987942-26987961 | Msa0112350:intron | 45.0% | |
| ! | TGTGGCTGTGTATTTGGTTC+TGG | - | chr1_3:26987999-26988018 | Msa0112350:intron | 45.0% |
| TTTGGAGAAAGCGGATGAAG+CGG | + | chr1_3:26988172-26988191 | None:intergenic | 45.0% | |
| ! | GAGTTCTATGGAGACTAGCT+AGG | - | chr1_3:26988426-26988445 | Msa0112350:intron | 45.0% |
| TTAGGCACGACAACGACAAT+GGG | - | chr1_3:26988538-26988557 | Msa0112350:intron | 45.0% | |
| TTATTGATCAGGACGGGACT+TGG | + | chr1_3:26988829-26988848 | None:intergenic | 45.0% | |
| GTGGCATTATTGATCAGGAC+GGG | + | chr1_3:26988835-26988854 | None:intergenic | 45.0% | |
| GGTGGCATTATTGATCAGGA+CGG | + | chr1_3:26988836-26988855 | None:intergenic | 45.0% | |
| !! | AGGTGATACCTTGGTGTCTA+GGG | - | chr1_3:26988870-26988889 | Msa0112350:intron | 45.0% |
| !!! | TTTTTAAGTGAGTGGCCTGG+AGG | - | chr1_3:26988923-26988942 | Msa0112350:intron | 45.0% |
| !! | CTTTGTCTAGTTGCTGGCTT+AGG | - | chr1_3:26989239-26989258 | Msa0112350:intron | 45.0% |
| GTTCCTTGCTTTGCTGCTAT+CGG | - | chr1_3:26989379-26989398 | Msa0112350:intron | 45.0% | |
| GCCTACTTGATGTTAGGGAT+GGG | - | chr1_3:26989757-26989776 | Msa0112350:intron | 45.0% | |
| TCCCATCCCTAACATCAAGT+AGG | + | chr1_3:26989761-26989780 | None:intergenic | 45.0% | |
| !! | GGCTTAAGAGGCTTTTTGAG+AGG | + | chr1_3:26989911-26989930 | None:intergenic | 45.0% |
| !!! | CTACTTTTTAGGTCTGAGCC+TGG | + | chr1_3:26990284-26990303 | None:intergenic | 45.0% |
| CAGGCTCAGACCTAAAAAGT+AGG | - | chr1_3:26990282-26990301 | Msa0112350:intron | 45.0% | |
| CATCAAGTAGGGATGGGAAT+AGG | + | chr1_3:26990393-26990412 | None:intergenic | 45.0% | |
| CAGGGTCGAATACATCAAGT+AGG | + | chr1_3:26990405-26990424 | None:intergenic | 45.0% | |
| ! | AGATGCCTGTTTCTCAGACA+GGG | + | chr1_3:26990423-26990442 | None:intergenic | 45.0% |
| TTGCATTGGAAGGGAATCGA+TGG | - | chr1_3:26990460-26990479 | Msa0112350:intron | 45.0% | |
| TGCATTGGAAGGGAATCGAT+GGG | - | chr1_3:26990461-26990480 | Msa0112350:intron | 45.0% | |
| CGTTGTAGTAGCATATCGCT+TGG | + | chr1_3:26990867-26990886 | None:intergenic | 45.0% | |
| GGCTCCTTGAATCTACGATA+TGG | + | chr1_3:26990962-26990981 | None:intergenic | 45.0% | |
| ! | TAAGAGTTAAGGGCATGCCT+CGG | + | chr1_3:26990983-26991002 | None:intergenic | 45.0% |
| CGATCTATACCCTAAGATGC+AGG | + | chr1_3:26991257-26991276 | None:intergenic | 45.0% | |
| !! | TGGATTAGCTCTGCAGTTAC+AGG | - | chr1_3:26991781-26991800 | Msa0112350:intron | 45.0% |
| TAGGAGTAGATAACCTCCCT+CGG | - | chr1_3:26991992-26992011 | Msa0112350:intron | 45.0% | |
| ACATCAGTAAAATCCGAGGG+AGG | + | chr1_3:26992008-26992027 | None:intergenic | 45.0% | |
| GAGAGTTGCAGAGAACTGTA+GGG | + | chr1_3:26992068-26992087 | None:intergenic | 45.0% | |
| AGATCGAGAACAGGATCATC+TGG | + | chr1_3:26992231-26992250 | None:intergenic | 45.0% | |
| TTTGAACCGAAGTCCTGGAT+CGG | - | chr1_3:26992266-26992285 | Msa0112350:CDS | 45.0% | |
| GGAACAGCACATGCTTAACA+TGG | - | chr1_3:26992322-26992341 | Msa0112350:CDS | 45.0% | |
| TTTACCGGGTCTCAAGATAC+TGG | + | chr1_3:26992355-26992374 | None:intergenic | 45.0% | |
| AGTATCTTGAGACCCGGTAA+AGG | - | chr1_3:26992354-26992373 | Msa0112350:CDS | 45.0% | |
| ! | AAGCCGTTTAGAGCCTTTAC+CGG | + | chr1_3:26992370-26992389 | None:intergenic | 45.0% |
| GTGGGGTAGCAAGTTAAGTA+TGG | - | chr1_3:26992560-26992579 | Msa0112350:CDS | 45.0% | |
| !!! | TAAATTTTATTTTATTCTTT+TGG | - | chr1_3:26989482-26989501 | Msa0112350:intron | 5.0% |
| !! | TGGAGAAGAGAGAGAGTGCT+AGG | + | chr1_3:26985737-26985756 | None:intergenic | 50.0% |
| AAGAGGTGAGAGAGAGGATG+AGG | + | chr1_3:26985764-26985783 | None:intergenic | 50.0% | |
| GTCGGGTAAAGAAATGGGTC+GGG | + | chr1_3:26985813-26985832 | None:intergenic | 50.0% | |
| GGTCGGGTAAAGAAATGGGT+CGG | + | chr1_3:26985814-26985833 | None:intergenic | 50.0% | |
| ! | GATGATGCGGTGGGTTTGAT+GGG | + | chr1_3:26985835-26985854 | None:intergenic | 50.0% |
| ! | AGATGATGCGGTGGGTTTGA+TGG | + | chr1_3:26985836-26985855 | None:intergenic | 50.0% |
| TTGGTCGTAGATGATGCGGT+GGG | + | chr1_3:26985844-26985863 | None:intergenic | 50.0% | |
| ! | ATGCTATGGAAGGTGGTGGT+GGG | + | chr1_3:26985878-26985897 | None:intergenic | 50.0% |
| ! | TATGCTATGGAAGGTGGTGG+TGG | + | chr1_3:26985879-26985898 | None:intergenic | 50.0% |
| AGGTATGCTATGGAAGGTGG+TGG | + | chr1_3:26985882-26985901 | None:intergenic | 50.0% | |
| CCCGGAAATGAGGTATGCTA+TGG | + | chr1_3:26985892-26985911 | None:intergenic | 50.0% | |
| TTCCGGGTCAAAGGGTGATT+CGG | - | chr1_3:26985905-26985924 | Msa0112350:CDS | 50.0% | |
| CGATCTGATTGAGGAGCAGA+AGG | + | chr1_3:26985996-26986015 | None:intergenic | 50.0% | |
| !! | GTCGGTGTTAGATATCGCGT+TGG | + | chr1_3:26986782-26986801 | None:intergenic | 50.0% |
| GTAGTATCCGGCAACTGTGT+CGG | - | chr1_3:26986869-26986888 | Msa0112350:intron | 50.0% | |
| GGCAACCCCAAAAATTGACG+CGG | - | chr1_3:26987574-26987593 | Msa0112350:intron | 50.0% | |
| !! | AAGCGCCGCGTCAATTTTTG+GGG | + | chr1_3:26987582-26987601 | None:intergenic | 50.0% |
| !! | CAAGCGCCGCGTCAATTTTT+GGG | + | chr1_3:26987583-26987602 | None:intergenic | 50.0% |
| !! | GGCTGTGTATTTGGTTCTGG+TGG | - | chr1_3:26988002-26988021 | Msa0112350:intron | 50.0% |
| TTGGAGAAAGCGGATGAAGC+GGG | + | chr1_3:26988171-26988190 | None:intergenic | 50.0% | |
| !!! | GCGTCGCGCTTTGTTGTTTT+TGG | - | chr1_3:26988211-26988230 | Msa0112350:intron | 50.0% |
| TTGTCAATAGCGGCTGAACG+CGG | + | chr1_3:26988258-26988277 | None:intergenic | 50.0% | |
| CTTAGGCACGACAACGACAA+TGG | - | chr1_3:26988537-26988556 | Msa0112350:intron | 50.0% | |
| TAGGCACGACAACGACAATG+GGG | - | chr1_3:26988539-26988558 | Msa0112350:intron | 50.0% | |
| TTCACACACACAGTAGCGAC+AGG | + | chr1_3:26988684-26988703 | None:intergenic | 50.0% | |
| ACTTGGATCCATGGACTTGG+GGG | + | chr1_3:26988812-26988831 | None:intergenic | 50.0% | |
| GACTTGGATCCATGGACTTG+GGG | + | chr1_3:26988813-26988832 | None:intergenic | 50.0% | |
| GGACTTGGATCCATGGACTT+GGG | + | chr1_3:26988814-26988833 | None:intergenic | 50.0% | |
| ATCACCTCAGGATGACCACT+AGG | + | chr1_3:26988857-26988876 | None:intergenic | 50.0% | |
| GTCATCCTGAGGTGATACCT+TGG | - | chr1_3:26988861-26988880 | Msa0112350:intron | 50.0% | |
| ! | AGACACCAAGGTATCACCTC+AGG | + | chr1_3:26988869-26988888 | None:intergenic | 50.0% |
| !! | GAGGTGATACCTTGGTGTCT+AGG | - | chr1_3:26988869-26988888 | Msa0112350:intron | 50.0% |
| GCAAATAGCCCTAGACACCA+AGG | + | chr1_3:26988881-26988900 | None:intergenic | 50.0% | |
| !! | TCTTTTGGTGGGTAGAGGAC+AGG | - | chr1_3:26989497-26989516 | Msa0112350:intron | 50.0% |
| !! | GATGTCTGTCGGCTCTACTT+TGG | - | chr1_3:26989632-26989651 | Msa0112350:intron | 50.0% |
| CACTAGTGGCAAAAAGCTCG+AGG | + | chr1_3:26989719-26989738 | None:intergenic | 50.0% | |
| GGCCTACTTGATGTTAGGGA+TGG | - | chr1_3:26989756-26989775 | Msa0112350:intron | 50.0% | |
| CTTAAATAGGCCGGCCTAAC+AGG | + | chr1_3:26989932-26989951 | None:intergenic | 50.0% | |
| ! | GGCCTTCTGAAAGCCTGATA+CGG | + | chr1_3:26990263-26990282 | None:intergenic | 50.0% |
| TATCAGGCTTTCAGAAGGCC+AGG | - | chr1_3:26990263-26990282 | Msa0112350:intron | 50.0% | |
| AAATATGGCAGGCCAGGCTT+AGG | - | chr1_3:26990342-26990361 | Msa0112350:intron | 50.0% | |
| AGGTCTTGCAAAGCCTAGCT+CGG | - | chr1_3:26990362-26990381 | Msa0112350:intron | 50.0% | |
| AGTAGGGATGGGAATAGGCT+AGG | + | chr1_3:26990388-26990407 | None:intergenic | 50.0% | |
| TTCGACCCTGTCTGAGAAAC+AGG | - | chr1_3:26990415-26990434 | Msa0112350:intron | 50.0% | |
| ! | GAGATGCCTGTTTCTCAGAC+AGG | + | chr1_3:26990424-26990443 | None:intergenic | 50.0% |
| TGGAAGGGAATCGATGGGAT+AGG | - | chr1_3:26990466-26990485 | Msa0112350:intron | 50.0% | |
| ATCGTAGATTCAAGGAGCCG+AGG | - | chr1_3:26990963-26990982 | Msa0112350:intron | 50.0% | |
| AGGAGAGACCATGACATGGT+AGG | - | chr1_3:26991691-26991710 | Msa0112350:intron | 50.0% | |
| CTCTCTCTGCCCAACTTGTA+AGG | + | chr1_3:26991744-26991763 | None:intergenic | 50.0% | |
| CGAGAGTTGCAGAGAACTGT+AGG | + | chr1_3:26992069-26992088 | None:intergenic | 50.0% | |
| TGGTCGATGAGATCGAGAAC+AGG | + | chr1_3:26992240-26992259 | None:intergenic | 50.0% | |
| GAACAACCGATCCAGGACTT+CGG | + | chr1_3:26992275-26992294 | None:intergenic | 50.0% | |
| ! | GTTCCTGGTGGATGGTGTTT+AGG | - | chr1_3:26992291-26992310 | Msa0112350:CDS | 50.0% |
| TCACCTAAACACCATCCACC+AGG | + | chr1_3:26992297-26992316 | None:intergenic | 50.0% | |
| GATGGTGTTTAGGTGAGCCT+GGG | - | chr1_3:26992301-26992320 | Msa0112350:CDS | 50.0% | |
| ! | GTTAAGCATGTGCTGTTCCC+AGG | + | chr1_3:26992321-26992340 | None:intergenic | 50.0% |
| GATGCCAGTATCTTGAGACC+CGG | - | chr1_3:26992348-26992367 | Msa0112350:CDS | 50.0% | |
| !! | GACCCGGTAAAGGCTCTAAA+CGG | - | chr1_3:26992364-26992383 | Msa0112350:CDS | 50.0% |
| ! | AGCCGTTTAGAGCCTTTACC+GGG | + | chr1_3:26992369-26992388 | None:intergenic | 50.0% |
| GAGAGAGAGGATGAGGAGGA+TGG | + | chr1_3:26985757-26985776 | None:intergenic | 55.0% | |
| AGGTGAGAGAGAGGATGAGG+AGG | + | chr1_3:26985761-26985780 | None:intergenic | 55.0% | |
| ! | ATGCGGTGGGTTTGATGGGT+CGG | + | chr1_3:26985831-26985850 | None:intergenic | 55.0% |
| CTTGGTCGTAGATGATGCGG+TGG | + | chr1_3:26985845-26985864 | None:intergenic | 55.0% | |
| !!! | GTGGTGGGGTGGTTTTGTCT+TGG | + | chr1_3:26985863-26985882 | None:intergenic | 55.0% |
| ! | TGCTATGGAAGGTGGTGGTG+GGG | + | chr1_3:26985877-26985896 | None:intergenic | 55.0% |
| CACCCTTTGACCCGGAAATG+AGG | + | chr1_3:26985902-26985921 | None:intergenic | 55.0% | |
| TCCGGGTCAAAGGGTGATTC+GGG | - | chr1_3:26985906-26985925 | Msa0112350:CDS | 55.0% | |
| ACCCGAATCACCCTTTGACC+CGG | + | chr1_3:26985910-26985929 | None:intergenic | 55.0% | |
| ! | GGTCAAAGGGTGATTCGGGT+CGG | - | chr1_3:26985910-26985929 | Msa0112350:CDS | 55.0% |
| ! | GTGATTCGGGTCGGATCCTT+AGG | - | chr1_3:26985919-26985938 | Msa0112350:CDS | 55.0% |
| GAGGGGAGTCAAATCGCTAG+AGG | - | chr1_3:26986538-26986557 | Msa0112350:intron | 55.0% | |
| ACGAACACCGACACAGTTGC+CGG | + | chr1_3:26986879-26986898 | None:intergenic | 55.0% | |
| !! | CCAAGCGCCGCGTCAATTTT+TGG | + | chr1_3:26987584-26987603 | None:intergenic | 55.0% |
| CCAAAAATTGACGCGGCGCT+TGG | - | chr1_3:26987581-26987600 | Msa0112350:intron | 55.0% | |
| TTTCTCCAAACGCTCCGCGT+TGG | - | chr1_3:26988182-26988201 | Msa0112350:intron | 55.0% | |
| AGGCACGACAACGACAATGG+GGG | - | chr1_3:26988540-26988559 | Msa0112350:intron | 55.0% | |
| GGGGCCTAAGAATTCTGAGC+AGG | + | chr1_3:26988637-26988656 | None:intergenic | 55.0% | |
| ACACACAGTAGCGACAGGAC+AGG | + | chr1_3:26988679-26988698 | None:intergenic | 55.0% | |
| TCTACTTCCCCCCAAGTCCA+TGG | - | chr1_3:26988801-26988820 | Msa0112350:intron | 55.0% | |
| CTTGGATCCATGGACTTGGG+GGG | + | chr1_3:26988811-26988830 | None:intergenic | 55.0% | |
| GGGACTTGGATCCATGGACT+TGG | + | chr1_3:26988815-26988834 | None:intergenic | 55.0% | |
| ACCTCAGGATGACCACTAGG+TGG | + | chr1_3:26988854-26988873 | None:intergenic | 55.0% | |
| ACCAAAAGAGGGTTGCCTCC+AGG | + | chr1_3:26988941-26988960 | None:intergenic | 55.0% | |
| GGTCCGATAGCAGCAAAGCA+AGG | + | chr1_3:26989385-26989404 | None:intergenic | 55.0% | |
| GTTAGGGATGGGAATAGGCC+AGG | - | chr1_3:26989768-26989787 | Msa0112350:intron | 55.0% | |
| AGCTTAAAAGGCCAGGCCAC+AGG | - | chr1_3:26989885-26989904 | Msa0112350:intron | 55.0% | |
| !! | TTTTTGAGAGGCCTGTGGCC+TGG | + | chr1_3:26989899-26989918 | None:intergenic | 55.0% |
| !! | GAGGCTTTTTGAGAGGCCTG+TGG | + | chr1_3:26989904-26989923 | None:intergenic | 55.0% |
| GCCTCTTAAGCCTGTTAGGC+CGG | - | chr1_3:26989919-26989938 | Msa0112350:intron | 55.0% | |
| ACAGGCTAGTAGGCCGTATC+AGG | - | chr1_3:26990247-26990266 | Msa0112350:intron | 55.0% | |
| GGCCGTATCAGGCTTTCAGA+AGG | - | chr1_3:26990258-26990277 | Msa0112350:intron | 55.0% | |
| TAAAGCCTAACCCTGGCCTG+CGG | + | chr1_3:26990319-26990338 | None:intergenic | 55.0% | |
| GGCTTTGCAAGACCTAAGCC+TGG | + | chr1_3:26990357-26990376 | None:intergenic | 55.0% | |
| CGAGAACAGGATCATCTGGC+TGG | + | chr1_3:26992227-26992246 | None:intergenic | 55.0% | |
| AGTCCTGGATCGGTTGTTCC+TGG | - | chr1_3:26992276-26992295 | Msa0112350:CDS | 55.0% | |
| GATCGGTTGTTCCTGGTGGA+TGG | - | chr1_3:26992283-26992302 | Msa0112350:CDS | 55.0% | |
| GGATGGTGTTTAGGTGAGCC+TGG | - | chr1_3:26992300-26992319 | Msa0112350:CDS | 55.0% | |
| AGGGGGAAGAGGTGAGAGAG+AGG | + | chr1_3:26985770-26985789 | None:intergenic | 60.0% | |
| GGTTGAGGAAGAGGGGGAAG+AGG | + | chr1_3:26985781-26985800 | None:intergenic | 60.0% | |
| ! | AGCGTGGGTTGAGGAAGAGG+GGG | + | chr1_3:26985787-26985806 | None:intergenic | 60.0% |
| ! | GAGCGTGGGTTGAGGAAGAG+GGG | + | chr1_3:26985788-26985807 | None:intergenic | 60.0% |
| ! | CGAGCGTGGGTTGAGGAAGA+GGG | + | chr1_3:26985789-26985808 | None:intergenic | 60.0% |
| ! | TCGAGCGTGGGTTGAGGAAG+AGG | + | chr1_3:26985790-26985809 | None:intergenic | 60.0% |
| AAATGGGTCGGGTCGAGCGT+GGG | + | chr1_3:26985802-26985821 | None:intergenic | 60.0% | |
| ! | TGCGGTGGGTTTGATGGGTC+GGG | + | chr1_3:26985830-26985849 | None:intergenic | 60.0% |
| !! | TATGGAAGGTGGTGGTGGGG+TGG | + | chr1_3:26985874-26985893 | None:intergenic | 60.0% |
| GTCAAAGCGGAAATGCGGCG+CGG | - | chr1_3:26987548-26987567 | Msa0112350:intron | 60.0% | |
| ! | AATTGACGCGGCGCTTGGTG+CGG | - | chr1_3:26987586-26987605 | Msa0112350:intron | 60.0% |
| GGCGCGATACGGATCAAAGC+GGG | + | chr1_3:26988128-26988147 | None:intergenic | 60.0% | |
| GGGCGCGATACGGATCAAAG+CGG | + | chr1_3:26988129-26988148 | None:intergenic | 60.0% | |
| GCGCAATTGCGGGCAAAAGC+GGG | + | chr1_3:26988149-26988168 | None:intergenic | 60.0% | |
| GGCGCAATTGCGGGCAAAAG+CGG | + | chr1_3:26988150-26988169 | None:intergenic | 60.0% | |
| GATGAAGCGGGCGCAATTGC+GGG | + | chr1_3:26988159-26988178 | None:intergenic | 60.0% | |
| GGATGAAGCGGGCGCAATTG+CGG | + | chr1_3:26988160-26988179 | None:intergenic | 60.0% | |
| ! | CGCGGAGCGTTTGGAGAAAG+CGG | + | chr1_3:26988181-26988200 | None:intergenic | 60.0% |
| CAGGACGGGACTTGGATCCA+TGG | + | chr1_3:26988821-26988840 | None:intergenic | 60.0% | |
| GCCACCTAGTGGTCATCCTG+AGG | - | chr1_3:26988850-26988869 | Msa0112350:intron | 60.0% | |
| ! | GCCTGGAGGCAACCCTCTTT+TGG | - | chr1_3:26988937-26988956 | Msa0112350:intron | 60.0% |
| GGGATGGGAATAGGCCAGGA+CGG | - | chr1_3:26989772-26989791 | Msa0112350:intron | 60.0% | |
| AATAGGCCAGGACGGCCTAC+AGG | - | chr1_3:26989780-26989799 | Msa0112350:intron | 60.0% | |
| ATAGGCCAGGACGGCCTACA+GGG | - | chr1_3:26989781-26989800 | Msa0112350:intron | 60.0% | |
| CCTGTCATAGGCTAGGCCGT+AGG | + | chr1_3:26989808-26989827 | None:intergenic | 60.0% | |
| CCTACGGCCTAGCCTATGAC+AGG | - | chr1_3:26989805-26989824 | Msa0112350:intron | 60.0% | |
| GCCGGCCTAACAGGCTTAAG+AGG | + | chr1_3:26989923-26989942 | None:intergenic | 60.0% | |
| GGAATAGGCTAGGCCGAGCT+AGG | + | chr1_3:26990378-26990397 | None:intergenic | 60.0% | |
| CCACCAGGAACAACCGATCC+AGG | + | chr1_3:26992282-26992301 | None:intergenic | 60.0% | |
| CCTGGATCGGTTGTTCCTGG+TGG | - | chr1_3:26992279-26992298 | Msa0112350:CDS | 60.0% | |
| GAAATGGGTCGGGTCGAGCG+TGG | + | chr1_3:26985803-26985822 | None:intergenic | 65.0% | |
| !! | ATTGACGCGGCGCTTGGTGC+GGG | - | chr1_3:26987587-26987606 | Msa0112350:intron | 65.0% |
| !! | GCGCGTAGCGGGCGCTATTT+CGG | - | chr1_3:26987609-26987628 | Msa0112350:intron | 65.0% |
| ! | CGGGCGCTATTTCGGTGACG+CGG | - | chr1_3:26987617-26987636 | Msa0112350:intron | 65.0% |
| GGGCAAAAGCGGGCGCGATA+CGG | + | chr1_3:26988139-26988158 | None:intergenic | 65.0% | |
| ! | GCACTCCAACGCGGAGCGTT+TGG | + | chr1_3:26988190-26988209 | None:intergenic | 65.0% |
| TAGGCCAGGACGGCCTACAG+GGG | - | chr1_3:26989782-26989801 | Msa0112350:intron | 65.0% | |
| GGCCTAGCCTATGACAGGCC+AGG | - | chr1_3:26989810-26989829 | Msa0112350:intron | 65.0% | |
| GGCCTGGCCTGTCATAGGCT+AGG | + | chr1_3:26989815-26989834 | None:intergenic | 65.0% | |
| AGCCTATGACAGGCCAGGCC+AGG | - | chr1_3:26989815-26989834 | Msa0112350:intron | 65.0% | |
| AGCCTGGCCTGGCCTGTCAT+AGG | + | chr1_3:26989820-26989839 | None:intergenic | 65.0% | |
| GTAGGCCTATGACAGGCCGC+AGG | - | chr1_3:26990300-26990319 | Msa0112350:intron | 65.0% | |
| CTATGACAGGCCGCAGGCCA+GGG | - | chr1_3:26990306-26990325 | Msa0112350:intron | 65.0% | |
| ! | GTCGGGTCGAGCGTGGGTTG+AGG | + | chr1_3:26985796-26985815 | None:intergenic | 70.0% |
| CGCGACGCAGCACTCCAACG+CGG | + | chr1_3:26988199-26988218 | None:intergenic | 70.0% | |
| GGCTGAACGCGGCGCAATCG+CGG | + | chr1_3:26988247-26988266 | None:intergenic | 70.0% | |
| TAGGCCCCTGTAGGCCGTCC+TGG | + | chr1_3:26989789-26989808 | None:intergenic | 70.0% | |
| GGACGGCCTACAGGGGCCTA+CGG | - | chr1_3:26989789-26989808 | Msa0112350:intron | 70.0% | |
| GCTAGGCCGTAGGCCCCTGT+AGG | + | chr1_3:26989798-26989817 | None:intergenic | 70.0% | |
| CCTGGCCTGCGGCCTGTCAT+AGG | + | chr1_3:26990308-26990327 | None:intergenic | 70.0% | |
| CCTATGACAGGCCGCAGGCC+AGG | - | chr1_3:26990305-26990324 | Msa0112350:intron | 70.0% | |
| ACAGGCCGCAGGCCAGGGTT+AGG | - | chr1_3:26990311-26990330 | Msa0112350:intron | 70.0% | |
| AGCGGAAATGCGGCGCGGCG+CGG | - | chr1_3:26987553-26987572 | Msa0112350:intron | 75.0% | |
| !! | CGCTTGGTGCGGGCGCGTAG+CGG | - | chr1_3:26987597-26987616 | Msa0112350:intron | 75.0% |
| !! | GCTTGGTGCGGGCGCGTAGC+GGG | - | chr1_3:26987598-26987617 | Msa0112350:intron | 75.0% |
| AACGCGGCGCAATCGCGGCG+CGG | + | chr1_3:26988242-26988261 | None:intergenic | 75.0% | |
| ! | GGCGCAATCGCGGCGCGGAG+CGG | + | chr1_3:26988237-26988256 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 26985496 | 26992790 | 26985496 | ID=Msa0112350;Name=Msa0112350 |
| chr1_3 | mRNA | 26985496 | 26992790 | 26985496 | ID=Msa0112350-mRNA-1;Parent=Msa0112350;Name=Msa0112350-mRNA-1;_AED=0.08;_eAED=0.08;_QI=113|1|1|1|1|1|4|341|438 |
| chr1_3 | exon | 26985496 | 26986342 | 26985496 | ID=Msa0112350-mRNA-1:exon:9099;Parent=Msa0112350-mRNA-1 |
| chr1_3 | exon | 26991057 | 26991172 | 26991057 | ID=Msa0112350-mRNA-1:exon:9098;Parent=Msa0112350-mRNA-1 |
| chr1_3 | exon | 26991887 | 26991962 | 26991887 | ID=Msa0112350-mRNA-1:exon:9097;Parent=Msa0112350-mRNA-1 |
| chr1_3 | exon | 26992059 | 26992790 | 26992059 | ID=Msa0112350-mRNA-1:exon:9096;Parent=Msa0112350-mRNA-1 |
| chr1_3 | five_prime_UTR | 26992678 | 26992790 | 26992678 | ID=Msa0112350-mRNA-1:five_prime_utr;Parent=Msa0112350-mRNA-1 |
| chr1_3 | CDS | 26992059 | 26992677 | 26992059 | ID=Msa0112350-mRNA-1:cds;Parent=Msa0112350-mRNA-1 |
| chr1_3 | CDS | 26991887 | 26991962 | 26991887 | ID=Msa0112350-mRNA-1:cds;Parent=Msa0112350-mRNA-1 |
| chr1_3 | CDS | 26991057 | 26991172 | 26991057 | ID=Msa0112350-mRNA-1:cds;Parent=Msa0112350-mRNA-1 |
| chr1_3 | CDS | 26985837 | 26986342 | 26985837 | ID=Msa0112350-mRNA-1:cds;Parent=Msa0112350-mRNA-1 |
| chr1_3 | three_prime_UTR | 26985496 | 26985836 | 26985496 | ID=Msa0112350-mRNA-1:three_prime_utr;Parent=Msa0112350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
