Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385830 | XP_013462262.1 | 90.385 | 572 | 5 | 1 | 1 | 522 | 1 | 572 | 0.0 | 1001 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385830 | sp|Q949U4|OFT16_ARATH | 64.398 | 573 | 152 | 5 | 1 | 522 | 1 | 572 | 0.0 | 754 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385830 | A0A072V388 | 90.385 | 572 | 5 | 1 | 1 | 522 | 1 | 572 | 0.0 | 1001 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000880 | Msa0385830 | 0.806875 | 6.651761e-50 | -8.615850e-47 |
| Msa0000910 | Msa0385830 | 0.800026 | 1.748109e-48 | -8.615850e-47 |
| Msa0024400 | Msa0385830 | 0.807194 | 5.695191e-50 | -8.615850e-47 |
| Msa0077340 | Msa0385830 | 0.801304 | 9.591905e-49 | -8.615850e-47 |
| Msa0089980 | Msa0385830 | 0.832345 | 9.968576e-56 | -8.615850e-47 |
| Msa0090010 | Msa0385830 | 0.831891 | 1.290439e-55 | -8.615850e-47 |
| Msa0091730 | Msa0385830 | 0.809425 | 1.904105e-50 | -8.615850e-47 |
| Msa0104670 | Msa0385830 | 0.800978 | 1.118456e-48 | -8.615850e-47 |
| Msa0106620 | Msa0385830 | 0.856441 | 3.211064e-62 | -8.615850e-47 |
| Msa0106710 | Msa0385830 | 0.844912 | 5.635230e-59 | -8.615850e-47 |
| Msa0108410 | Msa0385830 | 0.804832 | 1.787560e-49 | -8.615850e-47 |
| Msa0112350 | Msa0385830 | 0.800360 | 1.495110e-48 | -8.615850e-47 |
| Msa0120280 | Msa0385830 | 0.800193 | 1.616251e-48 | -8.615850e-47 |
| Msa0125360 | Msa0385830 | 0.800198 | 1.612872e-48 | -8.615850e-47 |
| Msa0138360 | Msa0385830 | 0.817025 | 4.084414e-52 | -8.615850e-47 |
| Msa0141400 | Msa0385830 | 0.805137 | 1.543581e-49 | -8.615850e-47 |
| Msa0147980 | Msa0385830 | 0.801693 | 7.980975e-49 | -8.615850e-47 |
| Msa0152850 | Msa0385830 | 0.801800 | 7.588604e-49 | -8.615850e-47 |
| Msa0163510 | Msa0385830 | 0.803453 | 3.461237e-49 | -8.615850e-47 |
| Msa0173800 | Msa0385830 | 0.811600 | 6.454704e-51 | -8.615850e-47 |
| Msa0186410 | Msa0385830 | 0.899655 | 1.597836e-77 | -8.615850e-47 |
| Msa0202110 | Msa0385830 | 0.812655 | 3.800435e-51 | -8.615850e-47 |
| Msa0205150 | Msa0385830 | 0.820734 | 5.865483e-53 | -8.615850e-47 |
| Msa0209140 | Msa0385830 | 0.834967 | 2.206142e-56 | -8.615850e-47 |
| Msa0217670 | Msa0385830 | 0.806241 | 9.049436e-50 | -8.615850e-47 |
| Msa0223330 | Msa0385830 | 0.807201 | 5.674239e-50 | -8.615850e-47 |
| Msa0223340 | Msa0385830 | 0.802680 | 5.002060e-49 | -8.615850e-47 |
| Msa0225480 | Msa0385830 | 0.835932 | 1.258241e-56 | -8.615850e-47 |
| Msa0231190 | Msa0385830 | 0.809330 | 1.996306e-50 | -8.615850e-47 |
| Msa0237210 | Msa0385830 | 0.823988 | 1.029410e-53 | -8.615850e-47 |
| Msa0237300 | Msa0385830 | 0.807525 | 4.844860e-50 | -8.615850e-47 |
| Msa0385830 | Msa0395980 | 0.804769 | 1.842529e-49 | -8.615850e-47 |
| Msa0385830 | Msa0408380 | 0.821904 | 3.150911e-53 | -8.615850e-47 |
| Msa0385830 | Msa0437020 | 0.817924 | 2.561874e-52 | -8.615850e-47 |
| Msa0385830 | Msa0439960 | 0.803539 | 3.322590e-49 | -8.615850e-47 |
| Msa0385830 | Msa0450400 | -0.833462 | 5.259953e-56 | -8.615850e-47 |
| Msa0385830 | Msa0479200 | 0.801930 | 7.135790e-49 | -8.615850e-47 |
| Msa0385830 | Msa0491000 | 0.808165 | 3.541985e-50 | -8.615850e-47 |
| Msa0385830 | Msa0518030 | 0.824996 | 5.962917e-54 | -8.615850e-47 |
| Msa0385830 | Msa0523290 | 0.827269 | 1.717142e-54 | -8.615850e-47 |
| Msa0385830 | Msa0527190 | 0.800545 | 1.370739e-48 | -8.615850e-47 |
| Msa0385830 | Msa0531250 | 0.821579 | 3.745793e-53 | -8.615850e-47 |
| Msa0385830 | Msa0553200 | 0.812945 | 3.283012e-51 | -8.615850e-47 |
| Msa0385830 | Msa0588090 | 0.805458 | 1.322064e-49 | -8.615850e-47 |
| Msa0385830 | Msa0626270 | 0.808629 | 2.819116e-50 | -8.615850e-47 |
| Msa0385830 | Msa0626460 | 0.836399 | 9.573572e-57 | -8.615850e-47 |
| Msa0385830 | Msa0628420 | 0.813415 | 2.589236e-51 | -8.615850e-47 |
| Msa0385830 | Msa0651560 | 0.824035 | 1.003817e-53 | -8.615850e-47 |
| Msa0385830 | Msa0664540 | 0.822044 | 2.924159e-53 | -8.615850e-47 |
| Msa0385830 | Msa0693330 | 0.825269 | 5.140553e-54 | -8.615850e-47 |
| Msa0385830 | Msa0702720 | 0.830992 | 2.148278e-55 | -8.615850e-47 |
| Msa0385830 | Msa0725550 | 0.836151 | 1.106992e-56 | -8.615850e-47 |
| Msa0385830 | Msa0855870 | 0.854485 | 1.193051e-61 | -8.615850e-47 |
| Msa0385830 | Msa0892640 | 0.803848 | 2.865324e-49 | -8.615850e-47 |
| Msa0385830 | Msa0933760 | 0.818630 | 1.773457e-52 | -8.615850e-47 |
| Msa0385830 | Msa0934140 | 0.826443 | 2.705136e-54 | -8.615850e-47 |
| Msa0385830 | Msa0959520 | 0.820027 | 8.518252e-53 | -8.615850e-47 |
| Msa0385830 | Msa1002960 | 0.816956 | 4.233385e-52 | -8.615850e-47 |
| Msa0385830 | Msa1076560 | 0.803704 | 3.070778e-49 | -8.615850e-47 |
| Msa0385830 | Msa1123770 | 0.811537 | 6.661377e-51 | -8.615850e-47 |
| Msa0385830 | Msa1127590 | 0.806483 | 8.047316e-50 | -8.615850e-47 |
| Msa0385830 | Msa1133590 | 0.805620 | 1.222279e-49 | -8.615850e-47 |
| Msa0385830 | Msa1165090 | 0.833546 | 5.011014e-56 | -8.615850e-47 |
| Msa0385830 | Msa1169910 | 0.810939 | 8.981337e-51 | -8.615850e-47 |
| Msa0385830 | Msa1174780 | 0.805837 | 1.100722e-49 | -8.615850e-47 |
| Msa0385830 | Msa1213040 | 0.805403 | 1.357907e-49 | -8.615850e-47 |
| Msa0385830 | Msa1271130 | 0.810457 | 1.141948e-50 | -8.615850e-47 |
| Msa0385830 | Msa1277080 | 0.803398 | 3.553979e-49 | -8.615850e-47 |
| Msa0385830 | Msa1292020 | 0.829224 | 5.801935e-55 | -8.615850e-47 |
| Msa0385830 | Msa1335160 | 0.801128 | 1.042065e-48 | -8.615850e-47 |
| Msa0385830 | Msa1340200 | 0.847205 | 1.340023e-59 | -8.615850e-47 |
| Msa0385830 | Msa1341840 | 0.817170 | 3.789466e-52 | -8.615850e-47 |
| Msa0385830 | Msa1356610 | 0.807589 | 4.695127e-50 | -8.615850e-47 |
| Msa0385830 | Msa1368080 | 0.808415 | 3.131973e-50 | -8.615850e-47 |
| Msa0385830 | Msa1369690 | 0.803736 | 3.023090e-49 | -8.615850e-47 |
| Msa0385830 | Msa1371520 | 0.814255 | 1.690742e-51 | -8.615850e-47 |
| Msa0385830 | Msa1373820 | 0.822980 | 1.772165e-53 | -8.615850e-47 |
| Msa0385830 | Msa1385720 | 0.812119 | 4.976150e-51 | -8.615850e-47 |
| Msa0385830 | Msa1393820 | 0.839631 | 1.411843e-57 | -8.615850e-47 |
| Msa0385830 | Msa1411000 | 0.806959 | 6.383992e-50 | -8.615850e-47 |
| Msa0385830 | Msa1411950 | 0.817855 | 2.655839e-52 | -8.615850e-47 |
| Msa0385830 | Msa1420120 | 0.806183 | 9.307275e-50 | -8.615850e-47 |
| Msa0385830 | Msa1433700 | 0.802560 | 5.294543e-49 | -8.615850e-47 |
| Msa0385830 | Msa1433870 | 0.815464 | 9.122537e-52 | -8.615850e-47 |
| Msa0385830 | Msa1434090 | 0.825131 | 5.541501e-54 | -8.615850e-47 |
| Msa0385830 | Msa1435360 | 0.806741 | 7.098391e-50 | -8.615850e-47 |
| Msa0385830 | Msa1452710 | 0.806953 | 6.403602e-50 | -8.615850e-47 |
| Msa0385830 | Msa1461370 | 0.824341 | 8.506784e-54 | -8.615850e-47 |
| Msa0385830 | Msa1463950 | 0.806894 | 6.590865e-50 | -8.615850e-47 |
| Msa0385830 | Msa1464090 | 0.841156 | 5.638055e-58 | -8.615850e-47 |
| Msa0241830 | Msa0385830 | 0.840354 | 9.147550e-58 | -8.615850e-47 |
| Msa0249310 | Msa0385830 | 0.826118 | 3.232659e-54 | -8.615850e-47 |
| Msa0257490 | Msa0385830 | 0.806467 | 8.111561e-50 | -8.615850e-47 |
| Msa0274720 | Msa0385830 | 0.814609 | 1.411944e-51 | -8.615850e-47 |
| Msa0279850 | Msa0385830 | 0.837854 | 4.065921e-57 | -8.615850e-47 |
| Msa0287790 | Msa0385830 | 0.826395 | 2.777230e-54 | -8.615850e-47 |
| Msa0288080 | Msa0385830 | 0.811847 | 5.703887e-51 | -8.615850e-47 |
| Msa0296250 | Msa0385830 | 0.805109 | 1.564328e-49 | -8.615850e-47 |
| Msa0296790 | Msa0385830 | 0.810550 | 1.090226e-50 | -8.615850e-47 |
| Msa0300280 | Msa0385830 | 0.820788 | 5.700563e-53 | -8.615850e-47 |
| Msa0304570 | Msa0385830 | 0.802307 | 5.970206e-49 | -8.615850e-47 |
| Msa0309990 | Msa0385830 | 0.829685 | 4.483030e-55 | -8.615850e-47 |
| Msa0315520 | Msa0385830 | 0.809493 | 1.841163e-50 | -8.615850e-47 |
| Msa0315690 | Msa0385830 | 0.816000 | 6.929744e-52 | -8.615850e-47 |
| Msa0322900 | Msa0385830 | 0.841336 | 5.054393e-58 | -8.615850e-47 |
| Msa0323260 | Msa0385830 | 0.809539 | 1.800349e-50 | -8.615850e-47 |
| Msa0339910 | Msa0385830 | 0.803870 | 2.836128e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385830 | MtrunA17_Chr3g0143821 | 90.385 | 572 | 5 | 1 | 1 | 522 | 1 | 572 | 0.0 | 1001 |
| Msa0385830 | MtrunA17_Chr5g0448581 | 65.161 | 465 | 154 | 2 | 27 | 484 | 85 | 548 | 0.0 | 644 |
| Msa0385830 | MtrunA17_Chr4g0056061 | 63.196 | 413 | 150 | 2 | 32 | 443 | 79 | 490 | 0.0 | 556 |
| Msa0385830 | MtrunA17_Chr5g0399311 | 62.712 | 413 | 152 | 2 | 32 | 443 | 95 | 506 | 0.0 | 547 |
| Msa0385830 | MtrunA17_Chr4g0042711 | 44.110 | 399 | 204 | 9 | 62 | 445 | 98 | 492 | 2.32e-100 | 311 |
| Msa0385830 | MtrunA17_Chr3g0129981 | 40.766 | 444 | 222 | 11 | 24 | 442 | 84 | 511 | 4.21e-100 | 311 |
| Msa0385830 | MtrunA17_Chr5g0417871 | 42.929 | 396 | 211 | 7 | 62 | 444 | 86 | 479 | 2.98e-99 | 308 |
| Msa0385830 | MtrunA17_Chr5g0426591 | 46.757 | 370 | 187 | 6 | 33 | 397 | 86 | 450 | 4.64e-99 | 309 |
| Msa0385830 | MtrunA17_Chr1g0160781 | 42.391 | 368 | 195 | 6 | 54 | 405 | 142 | 508 | 6.85e-99 | 309 |
| Msa0385830 | MtrunA17_Chr6g0455571 | 43.687 | 396 | 207 | 9 | 60 | 441 | 114 | 507 | 1.65e-97 | 304 |
| Msa0385830 | MtrunA17_Chr3g0132371 | 41.871 | 449 | 224 | 11 | 19 | 442 | 102 | 538 | 2.61e-97 | 305 |
| Msa0385830 | MtrunA17_Chr3g0077321 | 39.252 | 428 | 239 | 9 | 34 | 444 | 123 | 546 | 3.43e-97 | 305 |
| Msa0385830 | MtrunA17_Chr4g0043911 | 42.368 | 380 | 197 | 7 | 45 | 408 | 139 | 512 | 8.10e-97 | 304 |
| Msa0385830 | MtrunA17_Chr4g0008451 | 39.683 | 441 | 241 | 11 | 32 | 454 | 205 | 638 | 2.97e-96 | 305 |
| Msa0385830 | MtrunA17_Chr4g0061781 | 43.038 | 395 | 211 | 7 | 60 | 441 | 115 | 508 | 3.13e-95 | 298 |
| Msa0385830 | MtrunA17_Chr3g0123521 | 41.604 | 399 | 213 | 9 | 62 | 442 | 151 | 547 | 2.50e-94 | 297 |
| Msa0385830 | MtrunA17_Chr2g0307971 | 39.723 | 433 | 237 | 10 | 32 | 441 | 76 | 507 | 7.91e-94 | 295 |
| Msa0385830 | MtrunA17_Chr5g0436321 | 40.759 | 395 | 216 | 9 | 62 | 443 | 162 | 551 | 4.23e-91 | 289 |
| Msa0385830 | MtrunA17_Chr4g0070551 | 39.765 | 425 | 236 | 11 | 32 | 443 | 201 | 618 | 1.23e-90 | 290 |
| Msa0385830 | MtrunA17_Chr5g0424241 | 41.333 | 375 | 204 | 5 | 45 | 403 | 141 | 515 | 7.69e-90 | 286 |
| Msa0385830 | MtrunA17_Chr1g0204121 | 38.837 | 430 | 248 | 10 | 32 | 452 | 61 | 484 | 2.89e-86 | 275 |
| Msa0385830 | MtrunA17_Chr2g0284071 | 37.129 | 404 | 210 | 7 | 54 | 413 | 208 | 611 | 2.94e-86 | 279 |
| Msa0385830 | MtrunA17_Chr1g0204141 | 37.931 | 435 | 248 | 13 | 32 | 452 | 61 | 487 | 5.14e-82 | 264 |
| Msa0385830 | MtrunA17_Chr5g0412251 | 35.491 | 448 | 248 | 11 | 32 | 443 | 60 | 502 | 1.30e-81 | 263 |
| Msa0385830 | MtrunA17_Chr3g0087291 | 38.041 | 439 | 242 | 14 | 27 | 448 | 137 | 562 | 1.26e-77 | 254 |
| Msa0385830 | MtrunA17_Chr4g0075311 | 35.963 | 431 | 224 | 8 | 31 | 413 | 136 | 562 | 1.23e-76 | 252 |
| Msa0385830 | MtrunA17_Chr3g0132951 | 34.437 | 453 | 252 | 13 | 28 | 442 | 70 | 515 | 6.61e-76 | 248 |
| Msa0385830 | MtrunA17_Chr4g0010511 | 37.905 | 401 | 215 | 10 | 63 | 445 | 235 | 619 | 1.11e-72 | 243 |
| Msa0385830 | MtrunA17_Chr7g0220381 | 34.954 | 329 | 185 | 10 | 31 | 337 | 69 | 390 | 6.74e-49 | 179 |
| Msa0385830 | MtrunA17_Chr4g0003561 | 30.579 | 363 | 228 | 8 | 32 | 386 | 47 | 393 | 4.69e-47 | 169 |
| Msa0385830 | MtrunA17_Chr1g0146501 | 31.003 | 329 | 206 | 8 | 27 | 337 | 57 | 382 | 2.79e-36 | 142 |
| Msa0385830 | MtrunA17_Chr3g0127811 | 31.615 | 291 | 176 | 6 | 60 | 337 | 62 | 342 | 1.35e-33 | 133 |
| Msa0385830 | MtrunA17_Chr7g0240241 | 43.182 | 132 | 67 | 2 | 219 | 343 | 1 | 131 | 1.85e-26 | 104 |
| Msa0385830 | MtrunA17_Chr4g0002361 | 28.000 | 350 | 200 | 12 | 53 | 388 | 78 | 389 | 9.98e-26 | 109 |
| Msa0385830 | MtrunA17_Chr2g0298881 | 27.463 | 335 | 199 | 10 | 64 | 389 | 38 | 337 | 2.13e-24 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385830 | AT1G76270.1 | 64.398 | 573 | 152 | 5 | 1 | 522 | 1 | 572 | 0.0 | 754 |
| Msa0385830 | AT1G20550.1 | 64.049 | 573 | 146 | 6 | 1 | 522 | 1 | 564 | 0.0 | 743 |
| Msa0385830 | AT4G38390.1 | 67.661 | 436 | 140 | 1 | 19 | 453 | 81 | 516 | 0.0 | 645 |
| Msa0385830 | AT4G16650.2 | 60.138 | 434 | 159 | 3 | 32 | 464 | 93 | 513 | 0.0 | 523 |
| Msa0385830 | AT4G16650.1 | 60.138 | 434 | 159 | 3 | 32 | 464 | 93 | 513 | 0.0 | 523 |
| Msa0385830 | AT5G15740.1 | 39.662 | 474 | 250 | 10 | 3 | 441 | 26 | 498 | 2.02e-101 | 315 |
| Msa0385830 | AT5G64600.1 | 40.138 | 436 | 224 | 10 | 32 | 442 | 91 | 514 | 5.29e-100 | 311 |
| Msa0385830 | AT1G22460.1 | 46.070 | 369 | 186 | 7 | 33 | 396 | 135 | 495 | 1.80e-97 | 306 |
| Msa0385830 | AT3G02250.1 | 40.984 | 427 | 231 | 10 | 34 | 441 | 74 | 498 | 6.89e-97 | 303 |
| Msa0385830 | AT2G03280.1 | 40.793 | 429 | 227 | 10 | 38 | 441 | 54 | 480 | 3.49e-96 | 300 |
| Msa0385830 | AT1G14020.1 | 39.408 | 439 | 236 | 9 | 32 | 445 | 53 | 486 | 1.32e-95 | 299 |
| Msa0385830 | AT1G35510.1 | 37.472 | 451 | 257 | 9 | 14 | 444 | 113 | 558 | 2.16e-95 | 301 |
| Msa0385830 | AT2G01480.1 | 43.526 | 363 | 188 | 7 | 62 | 408 | 155 | 516 | 2.87e-95 | 300 |
| Msa0385830 | AT2G01480.2 | 43.785 | 354 | 183 | 6 | 62 | 399 | 155 | 508 | 7.02e-95 | 298 |
| Msa0385830 | AT3G26370.1 | 41.500 | 400 | 214 | 9 | 62 | 443 | 159 | 556 | 2.48e-94 | 298 |
| Msa0385830 | AT1G38065.1 | 41.270 | 378 | 205 | 6 | 52 | 413 | 27 | 403 | 6.90e-92 | 289 |
| Msa0385830 | AT1G14970.3 | 41.808 | 354 | 190 | 6 | 62 | 399 | 10 | 363 | 2.09e-91 | 286 |
| Msa0385830 | AT1G38065.2 | 40.602 | 399 | 212 | 8 | 46 | 420 | 8 | 405 | 2.24e-91 | 287 |
| Msa0385830 | AT3G54100.1 | 39.333 | 450 | 248 | 13 | 32 | 466 | 195 | 634 | 3.55e-91 | 292 |
| Msa0385830 | AT1G14970.2 | 41.808 | 354 | 190 | 6 | 62 | 399 | 36 | 389 | 5.19e-91 | 286 |
| Msa0385830 | AT2G37980.1 | 40.187 | 428 | 234 | 11 | 32 | 445 | 199 | 618 | 6.36e-91 | 291 |
| Msa0385830 | AT5G35570.1 | 40.610 | 426 | 233 | 11 | 33 | 445 | 225 | 643 | 1.45e-90 | 291 |
| Msa0385830 | AT2G03280.2 | 38.377 | 456 | 227 | 11 | 38 | 441 | 54 | 507 | 4.73e-90 | 285 |
| Msa0385830 | AT1G38131.1 | 41.058 | 397 | 210 | 8 | 28 | 408 | 129 | 517 | 5.21e-90 | 288 |
| Msa0385830 | AT1G14970.1 | 41.808 | 354 | 190 | 6 | 62 | 399 | 156 | 509 | 2.68e-89 | 285 |
| Msa0385830 | AT1G04910.1 | 35.914 | 465 | 269 | 10 | 32 | 487 | 61 | 505 | 7.60e-86 | 275 |
| Msa0385830 | AT1G62330.1 | 38.095 | 399 | 200 | 6 | 62 | 413 | 222 | 620 | 9.43e-85 | 275 |
| Msa0385830 | AT5G01100.1 | 34.698 | 464 | 267 | 13 | 14 | 460 | 178 | 622 | 4.26e-83 | 271 |
| Msa0385830 | AT1G11990.1 | 37.469 | 403 | 229 | 8 | 30 | 413 | 161 | 559 | 6.11e-83 | 269 |
| Msa0385830 | AT2G44500.1 | 38.534 | 423 | 245 | 9 | 32 | 444 | 146 | 563 | 2.32e-81 | 265 |
| Msa0385830 | AT1G29200.4 | 37.793 | 426 | 219 | 9 | 62 | 443 | 71 | 494 | 2.52e-81 | 262 |
| Msa0385830 | AT1G29200.1 | 37.793 | 426 | 219 | 9 | 62 | 443 | 71 | 494 | 2.52e-81 | 262 |
| Msa0385830 | AT4G24530.1 | 34.744 | 449 | 250 | 12 | 32 | 443 | 75 | 517 | 1.93e-80 | 260 |
| Msa0385830 | AT1G29200.2 | 37.793 | 426 | 219 | 9 | 62 | 443 | 187 | 610 | 2.73e-80 | 263 |
| Msa0385830 | AT1G29200.3 | 37.678 | 422 | 217 | 9 | 66 | 443 | 1 | 420 | 4.94e-80 | 256 |
| Msa0385830 | AT5G65470.1 | 35.177 | 452 | 246 | 11 | 32 | 443 | 59 | 503 | 1.19e-79 | 258 |
| Msa0385830 | AT3G07900.1 | 36.923 | 455 | 270 | 12 | 1 | 445 | 128 | 575 | 5.03e-76 | 251 |
| Msa0385830 | AT1G11990.2 | 34.318 | 440 | 229 | 9 | 30 | 413 | 146 | 581 | 7.94e-76 | 251 |
| Msa0385830 | AT5G63390.1 | 39.005 | 382 | 219 | 7 | 31 | 403 | 132 | 508 | 2.97e-75 | 248 |
| Msa0385830 | AT1G52630.1 | 30.811 | 370 | 232 | 8 | 16 | 379 | 32 | 383 | 4.59e-48 | 172 |
| Msa0385830 | AT3G26370.2 | 42.584 | 209 | 111 | 3 | 62 | 261 | 159 | 367 | 1.36e-46 | 167 |
| Msa0385830 | AT3G30300.2 | 32.927 | 328 | 197 | 9 | 29 | 337 | 69 | 392 | 1.96e-43 | 164 |
| Msa0385830 | AT3G30300.1 | 32.927 | 328 | 197 | 9 | 29 | 337 | 69 | 392 | 1.96e-43 | 164 |
| Msa0385830 | AT1G52630.2 | 30.744 | 309 | 193 | 6 | 77 | 379 | 2 | 295 | 4.60e-42 | 154 |
| Msa0385830 | AT3G03810.2 | 33.117 | 308 | 188 | 8 | 46 | 337 | 76 | 381 | 9.53e-42 | 159 |
| Msa0385830 | AT3G03810.1 | 33.117 | 308 | 188 | 8 | 46 | 337 | 76 | 381 | 9.53e-42 | 159 |
| Msa0385830 | AT2G44500.2 | 37.548 | 261 | 155 | 5 | 32 | 286 | 146 | 404 | 2.93e-41 | 154 |
| Msa0385830 | AT3G21190.1 | 26.302 | 384 | 225 | 16 | 21 | 388 | 51 | 392 | 3.73e-21 | 96.3 |
| Msa0385830 | AT1G51630.1 | 24.709 | 344 | 216 | 10 | 54 | 388 | 84 | 393 | 2.07e-19 | 91.3 |
Find 135 sgRNAs with CRISPR-Local
Find 504 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCATTAGACCGACTTCTTC+TGG | 0.168955 | 3_1:+89549014 | None:intergenic |
| TACTTTGGTTGTTCCAAAAT+TGG | 0.175411 | 3_1:-89553744 | Msa0385830:CDS |
| AGCCATGTTACCATTGTTAT+TGG | 0.202946 | 3_1:+89548773 | None:intergenic |
| TAAGACCGCTGATCCAATTT+TGG | 0.252503 | 3_1:+89553731 | None:intergenic |
| CCCTGCCTCCTGGCCCTATC+AGG | 0.263185 | 3_1:+89549053 | None:intergenic |
| AATTGGATCAGCGGTCTTAC+TGG | 0.268822 | 3_1:-89553727 | Msa0385830:CDS |
| TTTGGACTTGTAATTAAATC+TGG | 0.279945 | 3_1:-89547937 | Msa0385830:three_prime_UTR |
| CCAGAAAATGCAAGCATATC+AGG | 0.295328 | 3_1:+89549508 | None:intergenic |
| CAGAGATCTTTGATGTTGAT+TGG | 0.310241 | 3_1:-89553570 | Msa0385830:CDS |
| TTGTAATTAAATCTGGAAAA+AGG | 0.320138 | 3_1:-89547930 | Msa0385830:three_prime_UTR |
| CGAGAAGAAAATGAAGAAAA+TGG | 0.344650 | 3_1:+89548846 | None:intergenic |
| TGAAGATTCTGTGGCCAAAT+TGG | 0.350331 | 3_1:-89548435 | Msa0385830:CDS |
| GTTCATATTTATGTTGCATC+TGG | 0.359566 | 3_1:-89548966 | Msa0385830:CDS |
| ACATCTAGCTGCATACAAAA+TGG | 0.363570 | 3_1:-89547863 | Msa0385830:three_prime_UTR |
| GGTCTTACTGGAAAGATTCT+AGG | 0.369144 | 3_1:-89553715 | Msa0385830:intron |
| TCCTGATAGGGCCAGGAGGC+AGG | 0.383084 | 3_1:-89549054 | Msa0385830:CDS |
| GCATTAGACCGACTTCTTCT+GGG | 0.384373 | 3_1:+89549015 | None:intergenic |
| GGCTTGAATCAACAAAGAAC+TGG | 0.385240 | 3_1:-89554461 | Msa0385830:CDS |
| TACTTTCCAGAAAGGCTTCA+TGG | 0.385961 | 3_1:-89548522 | Msa0385830:CDS |
| CATCTTTCACTGCATTTCCT+TGG | 0.387886 | 3_1:+89553454 | None:intergenic |
| CCGACTTCTTCTGGGGTTAA+CGG | 0.388428 | 3_1:+89549023 | None:intergenic |
| CTACCAGGTCTAACCTCCTT+TGG | 0.391129 | 3_1:+89548494 | None:intergenic |
| CTTTCCGACCCTTACTGCTT+GGG | 0.395995 | 3_1:+89553503 | None:intergenic |
| AATCGAGCACTAGCTGCTTA+AGG | 0.397543 | 3_1:+89548140 | None:intergenic |
| TCTTCACATATGCAGGTAGA+TGG | 0.402793 | 3_1:+89548452 | None:intergenic |
| GACATCATTTGACAAATATG+AGG | 0.410175 | 3_1:+89553543 | None:intergenic |
| AGAGAAGGAACATAAGGAAC+TGG | 0.410517 | 3_1:-89549467 | Msa0385830:CDS |
| ATCGAGCACTAGCTGCTTAA+GGG | 0.411935 | 3_1:+89548141 | None:intergenic |
| CTTTCTTATAGGAGATACTT+TGG | 0.423658 | 3_1:-89548641 | Msa0385830:intron |
| GATATAATTTCCTCCAACTC+TGG | 0.425595 | 3_1:+89548221 | None:intergenic |
| ATTACATTGCACTGCATTTG+AGG | 0.426954 | 3_1:-89552367 | Msa0385830:intron |
| TTGACTACAGGCTTGCAAAC+AGG | 0.433422 | 3_1:-89552508 | Msa0385830:CDS |
| ATAAGGAACTGGGCGCAATA+AGG | 0.438812 | 3_1:-89549456 | Msa0385830:CDS |
| GGTCTAATGCTAAGAGCGTT+GGG | 0.438817 | 3_1:-89549002 | Msa0385830:CDS |
| CTATGAATCTCTGAACTTTG+AGG | 0.446497 | 3_1:-89548246 | Msa0385830:CDS |
| CGGTCTAATGCTAAGAGCGT+TGG | 0.446845 | 3_1:-89549003 | Msa0385830:CDS |
| GCTTTCCGACCCTTACTGCT+TGG | 0.447208 | 3_1:+89553502 | None:intergenic |
| TTAGCATTTGGACGAATAGT+TGG | 0.451966 | 3_1:+89548611 | None:intergenic |
| TAGTTCCTCCTTGGTAGCAA+TGG | 0.453907 | 3_1:+89548872 | None:intergenic |
| TGCAGAAAAGCAATCCTGAT+AGG | 0.456425 | 3_1:-89549067 | Msa0385830:intron |
| TTCATATTTATGTTGCATCT+GGG | 0.458097 | 3_1:-89548965 | Msa0385830:CDS |
| TCTTTCTCATCCTCATCCGT+TGG | 0.459648 | 3_1:+89552393 | None:intergenic |
| ATCAGAATGATCTTACAGAT+AGG | 0.461337 | 3_1:-89548295 | Msa0385830:CDS |
| CATCACAAACAATAAAATCA+AGG | 0.465180 | 3_1:+89548814 | None:intergenic |
| GCAATCAACAAATACCGATT+CGG | 0.465428 | 3_1:+89554494 | None:intergenic |
| ATGCTAAGAGCGTTGGGGTA+TGG | 0.468103 | 3_1:-89548996 | Msa0385830:CDS |
| CAAGCAACTCCCAAGCAGTA+AGG | 0.472904 | 3_1:-89553512 | Msa0385830:CDS |
| AAGTTAGCAATGAGTGGAAT+GGG | 0.481853 | 3_1:-89547900 | Msa0385830:three_prime_UTR |
| CACAGAATCTTCACATATGC+AGG | 0.485794 | 3_1:+89548445 | None:intergenic |
| AAAAGACTAACTACACCTAC+CGG | 0.486228 | 3_1:+89547665 | None:intergenic |
| TGTGTGGAGTTCGAGAAATT+CGG | 0.487684 | 3_1:-89554669 | Msa0385830:CDS |
| CGGACATCTTCCCTGCCTCC+TGG | 0.490472 | 3_1:+89549043 | None:intergenic |
| AACTCAACAAGTTTGACTAC+AGG | 0.491216 | 3_1:-89552520 | Msa0385830:CDS |
| CACTACTGCTACATTAACTT+CGG | 0.493130 | 3_1:+89547698 | None:intergenic |
| AGTGTTCGTACTTTCCAGAA+AGG | 0.497793 | 3_1:-89548530 | Msa0385830:CDS |
| AAATGGTTCTAGTTCCTCCT+TGG | 0.505721 | 3_1:+89548863 | None:intergenic |
| ACTTTCCAGAAAGGCTTCAT+GGG | 0.506686 | 3_1:-89548521 | Msa0385830:CDS |
| TGAACAGAAGTAACTCGACT+TGG | 0.511215 | 3_1:-89548568 | Msa0385830:CDS |
| CATACAAAATGGAGTTTGCT+AGG | 0.513920 | 3_1:-89547852 | Msa0385830:three_prime_UTR |
| GAACTTTGAGGATCCAGAGT+TGG | 0.522746 | 3_1:-89548234 | Msa0385830:CDS |
| GCGGCGACGGCGGAAATCAT+CGG | 0.525722 | 3_1:+89555059 | None:intergenic |
| AATGGAGTTTGCTAGGATGT+AGG | 0.525763 | 3_1:-89547845 | Msa0385830:three_prime_UTR |
| GAAGTTAGCAATGAGTGGAA+TGG | 0.526855 | 3_1:-89547901 | Msa0385830:three_prime_UTR |
| TGGAGGAGAGAAGGAACATA+AGG | 0.528093 | 3_1:-89549473 | Msa0385830:CDS |
| AAAGCAATCCTGATAGGGCC+AGG | 0.532881 | 3_1:-89549061 | Msa0385830:CDS |
| AGAAATTCGGAACACTTCTA+CGG | 0.534845 | 3_1:-89554656 | Msa0385830:CDS |
| GTATGCAGCTAGATGTCAAA+TGG | 0.538256 | 3_1:+89547870 | None:intergenic |
| TCATGAAACCCTCCTCTACC+AGG | 0.538317 | 3_1:+89548479 | None:intergenic |
| TGGGCGCAATAAGGAGGAGA+TGG | 0.539483 | 3_1:-89549447 | Msa0385830:CDS |
| CCTGATAGGGCCAGGAGGCA+GGG | 0.542578 | 3_1:-89549053 | Msa0385830:CDS |
| CATACAGCCTGCGTGTTCCA+AGG | 0.544507 | 3_1:-89553471 | Msa0385830:CDS |
| GAGGTTAGACCTGGTAGAGG+AGG | 0.544967 | 3_1:-89548488 | Msa0385830:CDS |
| GCATCTGGGGAAGTATATAG+AGG | 0.546011 | 3_1:-89548951 | Msa0385830:CDS |
| GCAGAAAAGCAATCCTGATA+GGG | 0.548539 | 3_1:-89549066 | Msa0385830:intron |
| AAAAGAAACCATTGCTACCA+AGG | 0.549342 | 3_1:-89548880 | Msa0385830:CDS |
| TCAGAATGATCTTACAGATA+GGG | 0.550242 | 3_1:-89548294 | Msa0385830:CDS |
| AAGTTGAGCATACCTTCGTC+CGG | 0.553115 | 3_1:+89548740 | None:intergenic |
| CACCAATAACAATGGTAACA+TGG | 0.554000 | 3_1:-89548775 | Msa0385830:CDS |
| CTTTGAGGATCCAGAGTTGG+AGG | 0.555340 | 3_1:-89548231 | Msa0385830:CDS |
| TGACTATGGTGGAGGAGAGA+AGG | 0.557134 | 3_1:-89549482 | Msa0385830:CDS |
| AAGCAACTCCCAAGCAGTAA+GGG | 0.557785 | 3_1:-89553511 | Msa0385830:CDS |
| ACTACTGCTACATTAACTTC+GGG | 0.558739 | 3_1:+89547699 | None:intergenic |
| TGGCTGAGCTGAACTTGAAG+TGG | 0.563987 | 3_1:-89548058 | Msa0385830:three_prime_UTR |
| GAAAGCTGAGCCGCGATGTG+TGG | 0.564328 | 3_1:-89554685 | Msa0385830:CDS |
| AACATGGCTAAAATATTAGC+CGG | 0.565993 | 3_1:-89548759 | Msa0385830:CDS |
| CTACAGGCTTGCAAACAGGT+TGG | 0.566092 | 3_1:-89552504 | Msa0385830:CDS |
| CGTACTTGGAAACTTGCTGC+TGG | 0.566592 | 3_1:+89554622 | None:intergenic |
| GACGGAAGCGTTGATAAAAG+TGG | 0.567941 | 3_1:+89555090 | None:intergenic |
| TTGTTGATTGCAACTAGTGG+AGG | 0.569731 | 3_1:-89554482 | Msa0385830:CDS |
| CGAAGTTAATGTAGCAGTAG+TGG | 0.570785 | 3_1:-89547697 | Msa0385830:three_prime_UTR |
| AAGCAGCTACAAAACCGAAT+CGG | 0.572163 | 3_1:-89554508 | Msa0385830:CDS |
| TATTTGTTGATTGCAACTAG+TGG | 0.574632 | 3_1:-89554485 | Msa0385830:CDS |
| TCGAGCACTAGCTGCTTAAG+GGG | 0.576768 | 3_1:+89548142 | None:intergenic |
| AGGTTAGACCTGGTAGAGGA+GGG | 0.579430 | 3_1:-89548487 | Msa0385830:CDS |
| GCAGTAGTGGTCTGATGACC+CGG | 0.580127 | 3_1:-89547684 | Msa0385830:three_prime_UTR |
| GCTTGAATCAACAAAGAACT+GGG | 0.581267 | 3_1:-89554460 | Msa0385830:CDS |
| ATCACAAACAATAAAATCAA+GGG | 0.582973 | 3_1:+89548815 | None:intergenic |
| AAGGAGGTTAGACCTGGTAG+AGG | 0.583281 | 3_1:-89548491 | Msa0385830:CDS |
| GCACATATATTTCTCAACAC+TGG | 0.588203 | 3_1:-89548078 | Msa0385830:three_prime_UTR |
| GTTATGTCGAATGAGTCAAC+AGG | 0.596798 | 3_1:+89548164 | None:intergenic |
| GAGCCAAAGGAGGTTAGACC+TGG | 0.602043 | 3_1:-89548497 | Msa0385830:CDS |
| CATTAGACCGACTTCTTCTG+GGG | 0.602188 | 3_1:+89549016 | None:intergenic |
| AACTCCCAAGCAGTAAGGGT+CGG | 0.602499 | 3_1:-89553507 | Msa0385830:CDS |
| AGGAACTGGGCGCAATAAGG+AGG | 0.607123 | 3_1:-89549453 | Msa0385830:CDS |
| GATCAGAAGTTAGCAATGAG+TGG | 0.607291 | 3_1:-89547906 | Msa0385830:three_prime_UTR |
| TTGTTCCAAAATTGGATCAG+CGG | 0.607564 | 3_1:-89553736 | Msa0385830:CDS |
| TTAGGGAATAATGCTTTGAG+AGG | 0.608619 | 3_1:+89548912 | None:intergenic |
| GAACAGAAGTAACTCGACTT+GGG | 0.609695 | 3_1:-89548567 | Msa0385830:CDS |
| TCATATTTATGTTGCATCTG+GGG | 0.612481 | 3_1:-89548964 | Msa0385830:CDS |
| TGCATTTCCTTGGAACACGC+AGG | 0.613917 | 3_1:+89553464 | None:intergenic |
| CTTTCCAGAAAGGCTTCATG+GGG | 0.618495 | 3_1:-89548520 | Msa0385830:CDS |
| AAAAGTTGTAGCAAATGATG+AGG | 0.618664 | 3_1:-89548366 | Msa0385830:CDS |
| TTTCTGGAAAGTACGAACAC+TGG | 0.620341 | 3_1:+89548532 | None:intergenic |
| TTCTCGAACTCCACACATCG+CGG | 0.620615 | 3_1:+89554675 | None:intergenic |
| CCGTTAACCCCAGAAGAAGT+CGG | 0.623838 | 3_1:-89549023 | Msa0385830:CDS |
| TCTGGATGTGACTATGGTGG+AGG | 0.624683 | 3_1:-89549490 | Msa0385830:CDS |
| GAGAAGGAACATAAGGAACT+GGG | 0.625349 | 3_1:-89549466 | Msa0385830:CDS |
| GATCGGTAAATCTTAGAGCA+TGG | 0.625626 | 3_1:+89552444 | None:intergenic |
| AGTTGTAGCAAATGATGAGG+TGG | 0.630159 | 3_1:-89548363 | Msa0385830:CDS |
| CTAAAATATTAGCCGGACGA+AGG | 0.633857 | 3_1:-89548752 | Msa0385830:intron |
| CAAAATTTAGCAACAAACCA+AGG | 0.635503 | 3_1:+89547966 | None:intergenic |
| CTGCATATGTGAAGATTCTG+TGG | 0.637691 | 3_1:-89548444 | Msa0385830:CDS |
| TAGTGGTCTGATGACCCGGT+AGG | 0.649897 | 3_1:-89547680 | Msa0385830:three_prime_UTR |
| ATATAGAGGAGATGAAACAT+TGG | 0.650301 | 3_1:-89548937 | Msa0385830:CDS |
| GTGTTTGTCACCAATAACAA+TGG | 0.650929 | 3_1:-89548783 | Msa0385830:CDS |
| AAAGACTAACTACACCTACC+GGG | 0.654014 | 3_1:+89547666 | None:intergenic |
| GGAAGCGTTGATAAAAGTGG+TGG | 0.655269 | 3_1:+89555093 | None:intergenic |
| AAATCATCGGAATCATAAGA+CGG | 0.658940 | 3_1:+89555072 | None:intergenic |
| GTCTAATGCTAAGAGCGTTG+GGG | 0.684569 | 3_1:-89549001 | Msa0385830:CDS |
| TTAGCAATGAGTGGAATGGG+AGG | 0.685475 | 3_1:-89547897 | Msa0385830:three_prime_UTR |
| GCAATCCTGATAGGGCCAGG+AGG | 0.699932 | 3_1:-89549058 | Msa0385830:CDS |
| AGAAACCATTGCTACCAAGG+AGG | 0.733733 | 3_1:-89548877 | Msa0385830:CDS |
| CTTGAATCAACAAAGAACTG+GGG | 0.754417 | 3_1:-89554459 | Msa0385830:intron |
| TTTCCAGAAAGGCTTCATGG+GGG | 0.754484 | 3_1:-89548519 | Msa0385830:CDS |
| GGATGTTGATGATAATGACG+AGG | 0.762535 | 3_1:-89548342 | Msa0385830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGATTATTTAATTACTATA+CGG | + | chr3_1:89548554-89548573 | None:intergenic | 10.0% |
| !! | AAGATATATATAATACTATT+AGG | - | chr3_1:89549488-89549507 | Msa0385830:CDS | 10.0% |
| !! | AAACAATTTAAAAACATAAA+AGG | + | chr3_1:89552611-89552630 | None:intergenic | 10.0% |
| !! | GTATAGTAATTAAATAATCA+TGG | - | chr3_1:89548553-89548572 | Msa0385830:CDS | 15.0% |
| !! | ATTAAACATAAAAGATTTAC+TGG | + | chr3_1:89548829-89548848 | None:intergenic | 15.0% |
| !!! | TATAGTAAATGTATTTTAGA+TGG | - | chr3_1:89549568-89549587 | Msa0385830:intron | 15.0% |
| !!! | ATTTTTATTATGCAAATCAT+GGG | + | chr3_1:89549863-89549882 | None:intergenic | 15.0% |
| !!! | AATTTTTATTATGCAAATCA+TGG | + | chr3_1:89549864-89549883 | None:intergenic | 15.0% |
| !! | TTGAAAATTTAATGATCATA+GGG | + | chr3_1:89549928-89549947 | None:intergenic | 15.0% |
| !! | TTTGAAAATTTAATGATCAT+AGG | + | chr3_1:89549929-89549948 | None:intergenic | 15.0% |
| !! | TGTTTATTAAAAGCAAAAAA+AGG | + | chr3_1:89550102-89550121 | None:intergenic | 15.0% |
| !! | AAATAAAATGAATATCTTAG+TGG | + | chr3_1:89550661-89550680 | None:intergenic | 15.0% |
| !! | AAAAATAAAAATCAGCATAA+TGG | + | chr3_1:89550801-89550820 | None:intergenic | 15.0% |
| !!! | TATGCTGATTTTTATTTTTT+TGG | - | chr3_1:89550802-89550821 | Msa0385830:intron | 15.0% |
| !!! | TTTATTTTTTTGGTTTAGAT+AGG | - | chr3_1:89550812-89550831 | Msa0385830:intron | 15.0% |
| !!! | TTATTTTTTTGGTTTAGATA+GGG | - | chr3_1:89550813-89550832 | Msa0385830:intron | 15.0% |
| !! | AAGAACAAATTTATAGTATT+TGG | + | chr3_1:89550991-89551010 | None:intergenic | 15.0% |
| !! | TTATAAATATAGCATACATT+TGG | + | chr3_1:89551483-89551502 | None:intergenic | 15.0% |
| !!! | AGATTTTTTAGAAATTTACA+AGG | + | chr3_1:89552119-89552138 | None:intergenic | 15.0% |
| !!! | TGTAAATTTCTAAAAAATCT+CGG | - | chr3_1:89552119-89552138 | Msa0385830:intron | 15.0% |
| !!! | TAATTTGAAACAAAGAAAAA+TGG | - | chr3_1:89552993-89553012 | Msa0385830:intron | 15.0% |
| !! | ATCTCTTAATAAATTATTGT+TGG | + | chr3_1:89553376-89553395 | None:intergenic | 15.0% |
| !! | ATTTAATGAAAAATGTAGTT+AGG | + | chr3_1:89553507-89553526 | None:intergenic | 15.0% |
| !!! | AGATTTCATGATTTTGTTAT+TGG | - | chr3_1:89548002-89548021 | Msa0385830:three_prime_UTR | 20.0% |
| !! | AATTTGACAACCTTAATATA+AGG | + | chr3_1:89548439-89548458 | None:intergenic | 20.0% |
| !! | TTATTGTTTCCAAACTATAT+GGG | - | chr3_1:89548902-89548921 | Msa0385830:CDS | 20.0% |
| !!! | GATCATTTTGTTTTTACAAA+TGG | - | chr3_1:89548950-89548969 | Msa0385830:CDS | 20.0% |
| !!! | TTATGTTTTCCTTTTTAAGT+AGG | - | chr3_1:89549424-89549443 | Msa0385830:intron | 20.0% |
| !!! | TTTTAACTGCTTTTCATTTA+AGG | - | chr3_1:89549514-89549533 | Msa0385830:CDS | 20.0% |
| !!! | ATCCTATGGTTTTAAATTTT+TGG | + | chr3_1:89549735-89549754 | None:intergenic | 20.0% |
| !!! | CAGAAATGGTTTTAAATTTT+TGG | + | chr3_1:89549773-89549792 | None:intergenic | 20.0% |
| !!! | TTTTTATTATGCAAATCATG+GGG | + | chr3_1:89549862-89549881 | None:intergenic | 20.0% |
| !! | GTCATATTTAATGATCAAAA+CGG | + | chr3_1:89549891-89549910 | None:intergenic | 20.0% |
| !!! | ACAGTTTTTTAGGAAATTTT+TGG | - | chr3_1:89550045-89550064 | Msa0385830:intron | 20.0% |
| !!! | ATATTGTTGCTTCATTTATA+TGG | - | chr3_1:89550205-89550224 | Msa0385830:intron | 20.0% |
| !!! | ATACTACATTATAGTTTTAG+TGG | + | chr3_1:89550514-89550533 | None:intergenic | 20.0% |
| !!! | TCATTTTATTTGCACAAATA+TGG | - | chr3_1:89550670-89550689 | Msa0385830:intron | 20.0% |
| !! | ACAAGTAATATAACTCAAAT+TGG | - | chr3_1:89550746-89550765 | Msa0385830:intron | 20.0% |
| !! | AAGAACAAGTTTACAATATA+TGG | - | chr3_1:89551099-89551118 | Msa0385830:intron | 20.0% |
| !! | ATGTATGCTATATTTATAAC+TGG | - | chr3_1:89551484-89551503 | Msa0385830:intron | 20.0% |
| !! | TTTGTTCTAGCATATAAAAT+AGG | - | chr3_1:89551769-89551788 | Msa0385830:intron | 20.0% |
| !! | CACTTTCAATTCATTTAATA+GGG | - | chr3_1:89551850-89551869 | Msa0385830:intron | 20.0% |
| !! | CAAAAGTTGTATAATTGAAA+AGG | + | chr3_1:89552304-89552323 | None:intergenic | 20.0% |
| !! | TTAAAAACATAAAAGGTGAT+GGG | + | chr3_1:89552604-89552623 | None:intergenic | 20.0% |
| !! | TTTAAAAACATAAAAGGTGA+TGG | + | chr3_1:89552605-89552624 | None:intergenic | 20.0% |
| !! | TAAAACACCCTTATTAATTA+TGG | - | chr3_1:89552743-89552762 | Msa0385830:intron | 20.0% |
| !! | CTACTAACCATAATTAATAA+GGG | + | chr3_1:89552753-89552772 | None:intergenic | 20.0% |
| !! | TCTACTAACCATAATTAATA+AGG | + | chr3_1:89552754-89552773 | None:intergenic | 20.0% |
| !! | AAGACTAAAACCTTAAAATT+AGG | + | chr3_1:89553030-89553049 | None:intergenic | 20.0% |
| !!! | TAATTTTAAGGTTTTAGTCT+TGG | - | chr3_1:89553029-89553048 | Msa0385830:intron | 20.0% |
| !!! | AATGGCTTTTAACATTTTAA+TGG | - | chr3_1:89553537-89553556 | Msa0385830:CDS | 20.0% |
| !!! | TTTCTTTTGAATGGAAATTA+GGG | + | chr3_1:89553866-89553885 | None:intergenic | 20.0% |
| !! | ATCACAAACAATAAAATCAA+GGG | + | chr3_1:89553946-89553965 | None:intergenic | 20.0% |
| !! | TTGTAATTAAATCTGGAAAA+AGG | - | chr3_1:89554828-89554847 | Msa0385830:intron | 20.0% |
| !!! | TTTTGTTTTGATCAGAAAGA+TGG | - | chr3_1:89548048-89548067 | Msa0385830:three_prime_UTR | 25.0% |
| ! | CTATTTCATTAATCAAAGCA+TGG | - | chr3_1:89548335-89548354 | Msa0385830:CDS | 25.0% |
| ! | ATCAGATTTGCCTTATATTA+AGG | - | chr3_1:89548426-89548445 | Msa0385830:CDS | 25.0% |
| !!! | AATAGTTTTGCATCAAAATC+TGG | - | chr3_1:89548793-89548812 | Msa0385830:CDS | 25.0% |
| ! | CTTATTGTTTCCAAACTATA+TGG | - | chr3_1:89548901-89548920 | Msa0385830:CDS | 25.0% |
| !! | ATTTGCATAATGAGTTTTTC+AGG | - | chr3_1:89549603-89549622 | Msa0385830:intron | 25.0% |
| !! | TGCCAAAAATTTAAAACCAT+AGG | - | chr3_1:89549730-89549749 | Msa0385830:intron | 25.0% |
| ! | AAATAGAAAAGGTTCAGAAA+TGG | + | chr3_1:89549787-89549806 | None:intergenic | 25.0% |
| !! | TTTTATTATGCAAATCATGG+GGG | + | chr3_1:89549861-89549880 | None:intergenic | 25.0% |
| !!! | ACTTAAAGTGGGTTAAATTT+CGG | + | chr3_1:89549959-89549978 | None:intergenic | 25.0% |
| ! | AAGTCCTAGTTTCTATAAAA+TGG | - | chr3_1:89549975-89549994 | Msa0385830:intron | 25.0% |
| ! | CTGATTTCAGTTATCAAAAT+AGG | - | chr3_1:89549998-89550017 | Msa0385830:intron | 25.0% |
| !!! | TTTTGACCCATTTTTAGTAT+TGG | + | chr3_1:89550339-89550358 | None:intergenic | 25.0% |
| ! | ACTAAAAATGGGTCAAAAAT+TGG | - | chr3_1:89550341-89550360 | Msa0385830:intron | 25.0% |
| ! | ATCAATCAGATTCATCAATT+TGG | - | chr3_1:89550485-89550504 | Msa0385830:intron | 25.0% |
| !! | ACATGAGCAAATTTTTAACA+AGG | + | chr3_1:89550563-89550582 | None:intergenic | 25.0% |
| ! | TACAAATACTTGTCAAAACT+GGG | - | chr3_1:89550582-89550601 | Msa0385830:intron | 25.0% |
| ! | TATAACTCAAATTGGATAAG+TGG | - | chr3_1:89550754-89550773 | Msa0385830:intron | 25.0% |
| ! | TTCACTTAATATGATCATTC+TGG | + | chr3_1:89551049-89551068 | None:intergenic | 25.0% |
| ! | GTGAAACAGAATTGTAATAA+AGG | - | chr3_1:89551064-89551083 | Msa0385830:intron | 25.0% |
| ! | AACAGAATTGTAATAAAGGT+TGG | - | chr3_1:89551068-89551087 | Msa0385830:intron | 25.0% |
| ! | TGAAGTTTCAATAACTCAAT+TGG | - | chr3_1:89551137-89551156 | Msa0385830:intron | 25.0% |
| ! | TCTCTAACATAGATCTTATA+CGG | - | chr3_1:89551323-89551342 | Msa0385830:intron | 25.0% |
| ! | TAAATATAGCATACATTTGG+AGG | + | chr3_1:89551480-89551499 | None:intergenic | 25.0% |
| ! | GCACTTTCAATTCATTTAAT+AGG | - | chr3_1:89551849-89551868 | Msa0385830:intron | 25.0% |
| !!! | TAATTTTTGCTTTGAACAGA+AGG | - | chr3_1:89552065-89552084 | Msa0385830:intron | 25.0% |
| !!! | AATGTAAATTGGGTTTTAGA+TGG | - | chr3_1:89552344-89552363 | Msa0385830:intron | 25.0% |
| ! | TATCAATGGAAATTTGATCA+AGG | - | chr3_1:89552411-89552430 | Msa0385830:CDS | 25.0% |
| ! | TCCTTTAGATATATCTTGAT+TGG | - | chr3_1:89552565-89552584 | Msa0385830:intron | 25.0% |
| ! | TCCAATCAAGATATATCTAA+AGG | + | chr3_1:89552569-89552588 | None:intergenic | 25.0% |
| !!! | TTAGTTTTACACGAGAATTA+AGG | - | chr3_1:89552675-89552694 | Msa0385830:intron | 25.0% |
| !!! | ATTAGTAGTGTTGATTTTCA+TGG | - | chr3_1:89552703-89552722 | Msa0385830:intron | 25.0% |
| ! | TGATTGAAATGCATGAAATA+AGG | - | chr3_1:89552782-89552801 | Msa0385830:intron | 25.0% |
| ! | GATTGAAATGCATGAAATAA+GGG | - | chr3_1:89552783-89552802 | Msa0385830:intron | 25.0% |
| !! | AATAAATAAGGGTATGATAG+TGG | - | chr3_1:89552929-89552948 | Msa0385830:intron | 25.0% |
| ! | AACAAAGAAAAATGGTAAAG+AGG | - | chr3_1:89553001-89553020 | Msa0385830:intron | 25.0% |
| !!! | TTGGTACTGTTGATTTTTTT+CGG | - | chr3_1:89553119-89553138 | Msa0385830:intron | 25.0% |
| ! | ATTACTTATGCAAAACCATA+TGG | - | chr3_1:89553448-89553467 | Msa0385830:CDS | 25.0% |
| ! | TAACATAAATTGATGCCATA+TGG | + | chr3_1:89553466-89553485 | None:intergenic | 25.0% |
| ! | CATTAAATGAATATCAGCAA+TGG | - | chr3_1:89553519-89553538 | Msa0385830:CDS | 25.0% |
| ! | TCAAATAATGCCTATTTACT+TGG | + | chr3_1:89553589-89553608 | None:intergenic | 25.0% |
| ! | TTCATATTTATGTTGCATCT+GGG | - | chr3_1:89553793-89553812 | Msa0385830:intron | 25.0% |
| !! | GTTTCTTTTGAATGGAAATT+AGG | + | chr3_1:89553867-89553886 | None:intergenic | 25.0% |
| ! | CATCACAAACAATAAAATCA+AGG | + | chr3_1:89553947-89553966 | None:intergenic | 25.0% |
| !!! | TGTTTATTTTCACTTTCTGT+TGG | - | chr3_1:89554049-89554068 | Msa0385830:intron | 25.0% |
| !! | TGGATCTAGAAAATTTTCAA+GGG | - | chr3_1:89554356-89554375 | Msa0385830:intron | 25.0% |
| !!! | ATCATTTGCTACAACTTTTT+TGG | + | chr3_1:89554391-89554410 | None:intergenic | 25.0% |
| !!! | ATATATGTGCTTTTTCTGTT+CGG | + | chr3_1:89554670-89554689 | None:intergenic | 25.0% |
| ! | TTTGGACTTGTAATTAAATC+TGG | - | chr3_1:89554821-89554840 | Msa0385830:intron | 25.0% |
| !! | AAATCTGTATATTTTCGTTG+AGG | - | chr3_1:89554937-89554956 | Msa0385830:intron | 25.0% |
| AAATCATCGGAATCATAAGA+CGG | + | chr3_1:89547689-89547708 | None:intergenic | 30.0% | |
| !! | AGGTTTTTCAATCACTTCAT+TGG | + | chr3_1:89547930-89547949 | None:intergenic | 30.0% |
| CTATTTGTGGATTCTGTTAT+TGG | - | chr3_1:89548163-89548182 | Msa0385830:three_prime_UTR | 30.0% | |
| ! | TATTTGTTGATTGCAACTAG+TGG | - | chr3_1:89548273-89548292 | Msa0385830:CDS | 30.0% |
| ATATAAGGCAAATCTGATTG+AGG | + | chr3_1:89548424-89548443 | None:intergenic | 30.0% | |
| AGAAAAGGGACTAAATTTGT+TGG | - | chr3_1:89548508-89548527 | Msa0385830:CDS | 30.0% | |
| ! | AATAATCATGGAGCATTAGT+TGG | - | chr3_1:89548565-89548584 | Msa0385830:CDS | 30.0% |
| TACTTTGGTTGTTCCAAAAT+TGG | - | chr3_1:89549014-89549033 | Msa0385830:CDS | 30.0% | |
| ! | ATTCTAGGTAATTTGCAGAA+AGG | - | chr3_1:89549058-89549077 | Msa0385830:CDS | 30.0% |
| TTACTGCAAAAGGTAAAGTA+TGG | + | chr3_1:89549163-89549182 | None:intergenic | 30.0% | |
| GACATCATTTGACAAATATG+AGG | + | chr3_1:89549218-89549237 | None:intergenic | 30.0% | |
| !!! | TGTTTTCCTTTTTAAGTAGG+AGG | - | chr3_1:89549427-89549446 | Msa0385830:intron | 30.0% |
| !!! | GTTCGATTTTTTTTATCGCT+CGG | - | chr3_1:89549465-89549484 | Msa0385830:CDS | 30.0% |
| !!! | GTTTTTCAGGTTTCTTCATT+AGG | - | chr3_1:89549616-89549635 | Msa0385830:intron | 30.0% |
| AAAAGATGAGAGATATCCTA+TGG | + | chr3_1:89549711-89549730 | None:intergenic | 30.0% | |
| TTGCCAAGTGATCTTATAAT+TGG | - | chr3_1:89549805-89549824 | Msa0385830:intron | 30.0% | |
| AGTCCAATTATAAGATCACT+TGG | + | chr3_1:89549811-89549830 | None:intergenic | 30.0% | |
| !! | CTTAAAGTGGGTTAAATTTC+GGG | + | chr3_1:89549958-89549977 | None:intergenic | 30.0% |
| TAGAAACTAGGACTTAAAGT+GGG | + | chr3_1:89549970-89549989 | None:intergenic | 30.0% | |
| ATAGAAACTAGGACTTAAAG+TGG | + | chr3_1:89549971-89549990 | None:intergenic | 30.0% | |
| !! | TCAGCCATTTTATAGAAACT+AGG | + | chr3_1:89549982-89550001 | None:intergenic | 30.0% |
| !!! | TGATACTGCAACAGTTTTTT+AGG | - | chr3_1:89550035-89550054 | Msa0385830:intron | 30.0% |
| TACCGATCCAATACTAAAAA+TGG | - | chr3_1:89550329-89550348 | Msa0385830:intron | 30.0% | |
| ACCGATCCAATACTAAAAAT+GGG | - | chr3_1:89550330-89550349 | Msa0385830:intron | 30.0% | |
| !!! | ACCCATTTTTAGTATTGGAT+CGG | + | chr3_1:89550334-89550353 | None:intergenic | 30.0% |
| TCTGATTGATAAGATTACCT+GGG | + | chr3_1:89550475-89550494 | None:intergenic | 30.0% | |
| ATCTGATTGATAAGATTACC+TGG | + | chr3_1:89550476-89550495 | None:intergenic | 30.0% | |
| GTACAAATACTTGTCAAAAC+TGG | - | chr3_1:89550581-89550600 | Msa0385830:intron | 30.0% | |
| CTTAACAAGCAAATGTAATG+AGG | + | chr3_1:89550634-89550653 | None:intergenic | 30.0% | |
| ! | ACATGGATGTTCATTTTCTT+GGG | - | chr3_1:89550696-89550715 | Msa0385830:intron | 30.0% |
| AAAAATCAGCATAATGGCAT+TGG | + | chr3_1:89550795-89550814 | None:intergenic | 30.0% | |
| ! | TCTCCTCCTTTTATCTAAAT+GGG | + | chr3_1:89550882-89550901 | None:intergenic | 30.0% |
| !! | TCAATAACTCAATTGGTTTG+AGG | - | chr3_1:89551144-89551163 | Msa0385830:intron | 30.0% |
| AAAAGATAGAGAAAAACTGC+AGG | + | chr3_1:89551351-89551370 | None:intergenic | 30.0% | |
| TTAGCGTGTTAAGATTAGAA+AGG | + | chr3_1:89551375-89551394 | None:intergenic | 30.0% | |
| TTCTAATCTTAACACGCTAA+TGG | - | chr3_1:89551375-89551394 | Msa0385830:intron | 30.0% | |
| AAACTAGTAATGCGCAATAA+AGG | - | chr3_1:89551534-89551553 | Msa0385830:intron | 30.0% | |
| TTCTTAACAAGAATCTTGAG+GGG | + | chr3_1:89551712-89551731 | None:intergenic | 30.0% | |
| GTTCTTAACAAGAATCTTGA+GGG | + | chr3_1:89551713-89551732 | None:intergenic | 30.0% | |
| AGTTCTTAACAAGAATCTTG+AGG | + | chr3_1:89551714-89551733 | None:intergenic | 30.0% | |
| ATATGCTAGAACAAAACATG+TGG | + | chr3_1:89551764-89551783 | None:intergenic | 30.0% | |
| AAGCTAACCAAGATGATATA+AGG | + | chr3_1:89552014-89552033 | None:intergenic | 30.0% | |
| CAGATATATTCAAGAGTTGT+TGG | + | chr3_1:89552252-89552271 | None:intergenic | 30.0% | |
| CAACAACTCTTGAATATATC+TGG | - | chr3_1:89552250-89552269 | Msa0385830:intron | 30.0% | |
| AATGGAAATTTGATCAAGGT+TGG | - | chr3_1:89552415-89552434 | Msa0385830:CDS | 30.0% | |
| AGTAACCGTTCAATTAAGAT+CGG | + | chr3_1:89552512-89552531 | None:intergenic | 30.0% | |
| ! | AAAGAGGACACCTAATTTTA+AGG | - | chr3_1:89553017-89553036 | Msa0385830:intron | 30.0% |
| GTTCATATTTATGTTGCATC+TGG | - | chr3_1:89553792-89553811 | Msa0385830:intron | 30.0% | |
| TCATATTTATGTTGCATCTG+GGG | - | chr3_1:89553794-89553813 | Msa0385830:intron | 30.0% | |
| ATATAGAGGAGATGAAACAT+TGG | - | chr3_1:89553821-89553840 | Msa0385830:intron | 30.0% | |
| ! | TAGCAATGGTTTCTTTTGAA+TGG | + | chr3_1:89553875-89553894 | None:intergenic | 30.0% |
| CGAGAAGAAAATGAAGAAAA+TGG | + | chr3_1:89553915-89553934 | None:intergenic | 30.0% | |
| AACATGGCTAAAATATTAGC+CGG | - | chr3_1:89553999-89554018 | Msa0385830:intron | 30.0% | |
| CTTTCTGTACACTTTCTTAT+AGG | - | chr3_1:89554106-89554125 | Msa0385830:intron | 30.0% | |
| CTTTCTTATAGGAGATACTT+TGG | - | chr3_1:89554117-89554136 | Msa0385830:intron | 30.0% | |
| !!! | CTGTAGAGTTTTTTAGCATT+TGG | + | chr3_1:89554162-89554181 | None:intergenic | 30.0% |
| ! | TCCAGAATTTTTGTCCAATT+TGG | + | chr3_1:89554340-89554359 | None:intergenic | 30.0% |
| ! | CTGGATCTAGAAAATTTTCA+AGG | - | chr3_1:89554355-89554374 | Msa0385830:intron | 30.0% |
| AAAAGTTGTAGCAAATGATG+AGG | - | chr3_1:89554392-89554411 | Msa0385830:intron | 30.0% | |
| ATCAGAATGATCTTACAGAT+AGG | - | chr3_1:89554463-89554482 | Msa0385830:CDS | 30.0% | |
| TCAGAATGATCTTACAGATA+GGG | - | chr3_1:89554464-89554483 | Msa0385830:CDS | 30.0% | |
| !!! | TATATGTGCTTTTTCTGTTC+GGG | + | chr3_1:89554669-89554688 | None:intergenic | 30.0% |
| !! | GTGCATTTTTAAGAGCATAA+TGG | - | chr3_1:89554769-89554788 | Msa0385830:intron | 30.0% |
| CAAAATTTAGCAACAAACCA+AGG | + | chr3_1:89554795-89554814 | None:intergenic | 30.0% | |
| !!! | TGGTTTGTTGCTAAATTTTG+TGG | - | chr3_1:89554795-89554814 | Msa0385830:intron | 30.0% |
| !!! | GGTTTGTTGCTAAATTTTGT+GGG | - | chr3_1:89554796-89554815 | Msa0385830:intron | 30.0% |
| TGTATATGATCGGAATCGAT+AGG | + | chr3_1:89547771-89547790 | None:intergenic | 35.0% | |
| !! | AATCCAGAAAAAGCACTAAC+CGG | + | chr3_1:89547965-89547984 | None:intergenic | 35.0% |
| !!! | TGTTTTGATCAGAAAGATGG+AGG | - | chr3_1:89548051-89548070 | Msa0385830:three_prime_UTR | 35.0% |
| AGAAATTCGGAACACTTCTA+CGG | - | chr3_1:89548102-89548121 | Msa0385830:three_prime_UTR | 35.0% | |
| CCACAAATAGATTACGTACT+TGG | + | chr3_1:89548153-89548172 | None:intergenic | 35.0% | |
| CCAAGTACGTAATCTATTTG+TGG | - | chr3_1:89548150-89548169 | Msa0385830:three_prime_UTR | 35.0% | |
| TGGATTCTGTTATTGGATCT+TGG | - | chr3_1:89548170-89548189 | Msa0385830:three_prime_UTR | 35.0% | |
| ! | GCAATCAACAAATACCGATT+CGG | + | chr3_1:89548267-89548286 | None:intergenic | 35.0% |
| GCTTGAATCAACAAAGAACT+GGG | - | chr3_1:89548298-89548317 | Msa0385830:CDS | 35.0% | |
| CTTGAATCAACAAAGAACTG+GGG | - | chr3_1:89548299-89548318 | Msa0385830:CDS | 35.0% | |
| CAAAGCATGGATTTCATATC+TGG | - | chr3_1:89548348-89548367 | Msa0385830:CDS | 35.0% | |
| ATGTGACATTCGATGAGAAA+AGG | - | chr3_1:89548493-89548512 | Msa0385830:CDS | 35.0% | |
| TGTGACATTCGATGAGAAAA+GGG | - | chr3_1:89548494-89548513 | Msa0385830:CDS | 35.0% | |
| GGTAGGATCTGAAAACATAA+GGG | + | chr3_1:89548736-89548755 | None:intergenic | 35.0% | |
| AATTAACAGAAAAGCCAAGC+GGG | + | chr3_1:89548757-89548776 | None:intergenic | 35.0% | |
| CAATTAACAGAAAAGCCAAG+CGG | + | chr3_1:89548758-89548777 | None:intergenic | 35.0% | |
| !! | GCGAATTTTGAATGCTACTT+TGG | - | chr3_1:89548999-89549018 | Msa0385830:CDS | 35.0% |
| TTGTTCCAAAATTGGATCAG+CGG | - | chr3_1:89549022-89549041 | Msa0385830:CDS | 35.0% | |
| ! | CTCTGAAAAGTTACTGCAAA+AGG | + | chr3_1:89549173-89549192 | None:intergenic | 35.0% |
| CAGAGATCTTTGATGTTGAT+TGG | - | chr3_1:89549188-89549207 | Msa0385830:intron | 35.0% | |
| AAAATCGAACTGAGAAACGA+AGG | + | chr3_1:89549455-89549474 | None:intergenic | 35.0% | |
| TTGTCCAAATCTCTATGTGA+TGG | - | chr3_1:89549541-89549560 | Msa0385830:intron | 35.0% | |
| TCATTAGGCTACTGATCTAT+TGG | - | chr3_1:89549631-89549650 | Msa0385830:intron | 35.0% | |
| GATCACTTGGCAAATAGAAA+AGG | + | chr3_1:89549798-89549817 | None:intergenic | 35.0% | |
| CAAATCATGGGGGAAAAATA+TGG | + | chr3_1:89549851-89549870 | None:intergenic | 35.0% | |
| AAAAGCAAAAAAAGGCCAGT+TGG | + | chr3_1:89550094-89550113 | None:intergenic | 35.0% | |
| ! | TGTTGCTTCATTTATATGGC+AGG | - | chr3_1:89550209-89550228 | Msa0385830:intron | 35.0% |
| AACTCAACAAGTTTGACTAC+AGG | - | chr3_1:89550238-89550257 | Msa0385830:intron | 35.0% | |
| ATTACATTGCACTGCATTTG+AGG | - | chr3_1:89550391-89550410 | Msa0385830:intron | 35.0% | |
| ACAGACAAGCGTATAAAAGA+GGG | + | chr3_1:89550435-89550454 | None:intergenic | 35.0% | |
| AGGACATTGATCGACATATA+TGG | + | chr3_1:89550543-89550562 | None:intergenic | 35.0% | |
| TTCAGTTCTTACTTTCATGC+TGG | - | chr3_1:89550605-89550624 | Msa0385830:intron | 35.0% | |
| TTGCACAAATATGGAACACA+TGG | - | chr3_1:89550679-89550698 | Msa0385830:intron | 35.0% | |
| ! | CACATGGATGTTCATTTTCT+TGG | - | chr3_1:89550695-89550714 | Msa0385830:intron | 35.0% |
| ! | CATGGATGTTCATTTTCTTG+GGG | - | chr3_1:89550697-89550716 | Msa0385830:intron | 35.0% |
| ! | ATGGATGTTCATTTTCTTGG+GGG | - | chr3_1:89550698-89550717 | Msa0385830:intron | 35.0% |
| GGTTTAGATAGGGAACTATA+AGG | - | chr3_1:89550823-89550842 | Msa0385830:intron | 35.0% | |
| GTTGTGCCCATTTAGATAAA+AGG | - | chr3_1:89550873-89550892 | Msa0385830:intron | 35.0% | |
| ! | CTCTCCTCCTTTTATCTAAA+TGG | + | chr3_1:89550883-89550902 | None:intergenic | 35.0% |
| ! | ATTTTCAGCCTTTACTACAG+TGG | - | chr3_1:89551015-89551034 | Msa0385830:intron | 35.0% |
| TTACATTGCCACTGTAGTAA+AGG | + | chr3_1:89551026-89551045 | None:intergenic | 35.0% | |
| !! | AACTCAATTGGTTTGAGGTA+AGG | - | chr3_1:89551149-89551168 | Msa0385830:intron | 35.0% |
| !! | ACTCAATTGGTTTGAGGTAA+GGG | - | chr3_1:89551150-89551169 | Msa0385830:intron | 35.0% |
| GGAGGAATAAGAAAGGAAAT+TGG | + | chr3_1:89551454-89551473 | None:intergenic | 35.0% | |
| ATAGCATACATTTGGAGGAA+TGG | + | chr3_1:89551475-89551494 | None:intergenic | 35.0% | |
| TCACCTACTATCACATTTGA+GGG | + | chr3_1:89551586-89551605 | None:intergenic | 35.0% | |
| ACTCGATTTATACTACTCCT+TGG | + | chr3_1:89551610-89551629 | None:intergenic | 35.0% | |
| ATATCTTATGTGACAGTCTC+GGG | + | chr3_1:89551814-89551833 | None:intergenic | 35.0% | |
| CATATCTTATGTGACAGTCT+CGG | + | chr3_1:89551815-89551834 | None:intergenic | 35.0% | |
| AGACTGTCACATAAGATATG+AGG | - | chr3_1:89551815-89551834 | Msa0385830:intron | 35.0% | |
| GACTGTCACATAAGATATGA+GGG | - | chr3_1:89551816-89551835 | Msa0385830:intron | 35.0% | |
| AAGATATGAGGGATGTCAAA+AGG | - | chr3_1:89551827-89551846 | Msa0385830:intron | 35.0% | |
| ATGATATAAGGTCCACTTCA+GGG | + | chr3_1:89552002-89552021 | None:intergenic | 35.0% | |
| AAGTGGACCTTATATCATCT+TGG | - | chr3_1:89552004-89552023 | Msa0385830:intron | 35.0% | |
| TCTAGAGAATCATTGGAAAG+TGG | + | chr3_1:89552147-89552166 | None:intergenic | 35.0% | |
| ACTTTCCAATGATTCTCTAG+AGG | - | chr3_1:89552146-89552165 | Msa0385830:intron | 35.0% | |
| GTTTCATCTACAATGATCAG+TGG | + | chr3_1:89552196-89552215 | None:intergenic | 35.0% | |
| !!! | TCTGGCTTTTTTGTCTGATT+TGG | - | chr3_1:89552268-89552287 | Msa0385830:intron | 35.0% |
| !! | CTTTTGTTGTCAAATCCCAA+CGG | - | chr3_1:89552318-89552337 | Msa0385830:intron | 35.0% |
| !! | TTTTGTTGTCAAATCCCAAC+GGG | - | chr3_1:89552319-89552338 | Msa0385830:intron | 35.0% |
| !!! | ATTGGGTTTTAGATGGATTG+AGG | - | chr3_1:89552351-89552370 | Msa0385830:intron | 35.0% |
| !! | AGATGGATTGAGGATGAATT+TGG | - | chr3_1:89552361-89552380 | Msa0385830:intron | 35.0% |
| ACTGTCCGATCTTAATTGAA+CGG | - | chr3_1:89552504-89552523 | Msa0385830:CDS | 35.0% | |
| CTCTTACTCTGTCTCAAATT+AGG | - | chr3_1:89552647-89552666 | Msa0385830:intron | 35.0% | |
| ATTCTCTCTGTTGCCAATTT+CGG | - | chr3_1:89552878-89552897 | Msa0385830:intron | 35.0% | |
| !!! | TTTTTTCGGACAGCAAACAA+TGG | - | chr3_1:89553133-89553152 | Msa0385830:intron | 35.0% |
| ACACTTGTATAGATCCTATC+AGG | - | chr3_1:89553161-89553180 | Msa0385830:intron | 35.0% | |
| CACTTGTATAGATCCTATCA+GGG | - | chr3_1:89553162-89553181 | Msa0385830:intron | 35.0% | |
| TATCTATTACTCTCCCTGAT+AGG | + | chr3_1:89553178-89553197 | None:intergenic | 35.0% | |
| ! | ACAGTTTTCTCATGCAAACA+TGG | + | chr3_1:89553631-89553650 | None:intergenic | 35.0% |
| ! | TTAGGGAATAATGCTTTGAG+AGG | + | chr3_1:89553849-89553868 | None:intergenic | 35.0% |
| AAAAGAAACCATTGCTACCA+AGG | - | chr3_1:89553878-89553897 | Msa0385830:intron | 35.0% | |
| ! | TTCTTCATTTTCTTCTCGCA+TGG | - | chr3_1:89553917-89553936 | Msa0385830:intron | 35.0% |
| GTGTTTGTCACCAATAACAA+TGG | - | chr3_1:89553975-89553994 | Msa0385830:intron | 35.0% | |
| CACCAATAACAATGGTAACA+TGG | - | chr3_1:89553983-89554002 | Msa0385830:intron | 35.0% | |
| AGCCATGTTACCATTGTTAT+TGG | + | chr3_1:89553988-89554007 | None:intergenic | 35.0% | |
| TAAGTGTAGATATCAGTGAC+GGG | + | chr3_1:89554078-89554097 | None:intergenic | 35.0% | |
| GTAAGTGTAGATATCAGTGA+CGG | + | chr3_1:89554079-89554098 | None:intergenic | 35.0% | |
| TTAGCATTTGGACGAATAGT+TGG | + | chr3_1:89554150-89554169 | None:intergenic | 35.0% | |
| GCCAAATTGGACAAAAATTC+TGG | - | chr3_1:89554336-89554355 | Msa0385830:intron | 35.0% | |
| CTATGAATCTCTGAACTTTG+AGG | - | chr3_1:89554512-89554531 | Msa0385830:CDS | 35.0% | |
| GATATAATTTCCTCCAACTC+TGG | + | chr3_1:89554540-89554559 | None:intergenic | 35.0% | |
| GCACATATATTTCTCAACAC+TGG | - | chr3_1:89554680-89554699 | Msa0385830:CDS | 35.0% | |
| !! | TTTTAAGAGCATAATGGCCT+TGG | - | chr3_1:89554775-89554794 | Msa0385830:intron | 35.0% |
| ! | TGCTAAATTTTGTGGGTGTT+TGG | - | chr3_1:89554803-89554822 | Msa0385830:intron | 35.0% |
| AAGTTAGCAATGAGTGGAAT+GGG | - | chr3_1:89554858-89554877 | Msa0385830:intron | 35.0% | |
| ACATCTAGCTGCATACAAAA+TGG | - | chr3_1:89554895-89554914 | Msa0385830:intron | 35.0% | |
| ! | CATACAAAATGGAGTTTGCT+AGG | - | chr3_1:89554906-89554925 | Msa0385830:intron | 35.0% |
| ACTACTGCTACATTAACTTC+GGG | + | chr3_1:89555062-89555081 | None:intergenic | 35.0% | |
| CACTACTGCTACATTAACTT+CGG | + | chr3_1:89555063-89555082 | None:intergenic | 35.0% | |
| AAAAGACTAACTACACCTAC+CGG | + | chr3_1:89555096-89555115 | None:intergenic | 35.0% | |
| AGCGAAGAGAAAAAGTAGAG+CGG | + | chr3_1:89547724-89547743 | None:intergenic | 40.0% | |
| TCGATTCCGATCATATACAC+CGG | - | chr3_1:89547772-89547791 | Msa0385830:three_prime_UTR | 40.0% | |
| AGAGATTTACCGTGATGTGT+TGG | + | chr3_1:89547803-89547822 | None:intergenic | 40.0% | |
| !! | AAAAAGCACTAACCGGAACA+CGG | + | chr3_1:89547958-89547977 | None:intergenic | 40.0% |
| TGTGTGGAGTTCGAGAAATT+CGG | - | chr3_1:89548089-89548108 | Msa0385830:three_prime_UTR | 40.0% | |
| AAGCAGCTACAAAACCGAAT+CGG | - | chr3_1:89548250-89548269 | Msa0385830:CDS | 40.0% | |
| ! | TTGTTGATTGCAACTAGTGG+AGG | - | chr3_1:89548276-89548295 | Msa0385830:CDS | 40.0% |
| GGCTTGAATCAACAAAGAAC+TGG | - | chr3_1:89548297-89548316 | Msa0385830:CDS | 40.0% | |
| GGGTAGGATCTGAAAACATA+AGG | + | chr3_1:89548737-89548756 | None:intergenic | 40.0% | |
| AGCTGAGTACCCATATAGTT+TGG | + | chr3_1:89548914-89548933 | None:intergenic | 40.0% | |
| ! | TAAGACCGCTGATCCAATTT+TGG | + | chr3_1:89549030-89549049 | None:intergenic | 40.0% |
| GGTCTTACTGGAAAGATTCT+AGG | - | chr3_1:89549043-89549062 | Msa0385830:CDS | 40.0% | |
| CATCTTTCACTGCATTTCCT+TGG | + | chr3_1:89549307-89549326 | None:intergenic | 40.0% | |
| ! | AAGGCACCTCCTACTTAAAA+AGG | + | chr3_1:89549436-89549455 | None:intergenic | 40.0% |
| GCATCCATCACATAGAGATT+TGG | + | chr3_1:89549548-89549567 | None:intergenic | 40.0% | |
| !! | TGAATTTTAACCCCGATGTG+TGG | - | chr3_1:89549662-89549681 | Msa0385830:intron | 40.0% |
| CTTGACTGAGAAGTTACTTC+AGG | + | chr3_1:89549690-89549709 | None:intergenic | 40.0% | |
| AGTAACTTCTCAGTCAAGCT+AGG | - | chr3_1:89549692-89549711 | Msa0385830:intron | 40.0% | |
| GATCGGTAAATCTTAGAGCA+TGG | + | chr3_1:89550317-89550336 | None:intergenic | 40.0% | |
| TGGGTCAAAAATTGGTCCAA+CGG | - | chr3_1:89550349-89550368 | Msa0385830:intron | 40.0% | |
| AAAAATTGGTCCAACGGATG+AGG | - | chr3_1:89550355-89550374 | Msa0385830:intron | 40.0% | |
| GACAGACAAGCGTATAAAAG+AGG | + | chr3_1:89550436-89550455 | None:intergenic | 40.0% | |
| CCTGGGAAAGTGAATTAAAC+AGG | + | chr3_1:89550458-89550477 | None:intergenic | 40.0% | |
| CCTGTTTAATTCACTTTCCC+AGG | - | chr3_1:89550455-89550474 | Msa0385830:intron | 40.0% | |
| TAAATGGGCACAACTTCAAC+AGG | + | chr3_1:89550867-89550886 | None:intergenic | 40.0% | |
| GTGCCCATTTAGATAAAAGG+AGG | - | chr3_1:89550876-89550895 | Msa0385830:intron | 40.0% | |
| ! | GGTTTGAGGTAAGGGATTAA+AGG | - | chr3_1:89551158-89551177 | Msa0385830:intron | 40.0% |
| AGGTAAGGGATTAAAGGAGT+TGG | - | chr3_1:89551164-89551183 | Msa0385830:intron | 40.0% | |
| GGTAAGGGATTAAAGGAGTT+GGG | - | chr3_1:89551165-89551184 | Msa0385830:intron | 40.0% | |
| GTAAGGGATTAAAGGAGTTG+GGG | - | chr3_1:89551166-89551185 | Msa0385830:intron | 40.0% | |
| GGGGAGTTAAAAAAAGTCCA+AGG | - | chr3_1:89551185-89551204 | Msa0385830:intron | 40.0% | |
| !! | AAAGTCCAAGGTTTTAGCCT+TGG | - | chr3_1:89551197-89551216 | Msa0385830:intron | 40.0% |
| ! | TGATACTTTTCTCCTTGCCA+AGG | + | chr3_1:89551217-89551236 | None:intergenic | 40.0% |
| CCAGGGACTCTAATTTAACT+TGG | + | chr3_1:89551298-89551317 | None:intergenic | 40.0% | |
| CCAAGTTAAATTAGAGTCCC+TGG | - | chr3_1:89551295-89551314 | Msa0385830:intron | 40.0% | |
| CTATGTTAGAGAAGATGCCA+GGG | + | chr3_1:89551315-89551334 | None:intergenic | 40.0% | |
| TCTATGTTAGAGAAGATGCC+AGG | + | chr3_1:89551316-89551335 | None:intergenic | 40.0% | |
| GAGGAATGGAGGAATAAGAA+AGG | + | chr3_1:89551461-89551480 | None:intergenic | 40.0% | |
| GCCTGCTATCAAATTACACA+CGG | - | chr3_1:89551506-89551525 | Msa0385830:intron | 40.0% | |
| ! | TCCGTGTGTAATTTGATAGC+AGG | + | chr3_1:89551510-89551529 | None:intergenic | 40.0% |
| ACCTACTATCACATTTGAGG+GGG | + | chr3_1:89551584-89551603 | None:intergenic | 40.0% | |
| CACCTACTATCACATTTGAG+GGG | + | chr3_1:89551585-89551604 | None:intergenic | 40.0% | |
| CTCACCTACTATCACATTTG+AGG | + | chr3_1:89551587-89551606 | None:intergenic | 40.0% | |
| GTATAAATCGAGTGTCTCTG+AGG | - | chr3_1:89551617-89551636 | Msa0385830:intron | 40.0% | |
| ! | TCTTTGAGTAGAGAGAGCAT+TGG | - | chr3_1:89551648-89551667 | Msa0385830:intron | 40.0% |
| TGGTTAAAATATCAGCCAGC+TGG | - | chr3_1:89551668-89551687 | Msa0385830:intron | 40.0% | |
| !!! | CGTATTTTAAGGCCATGAGT+TGG | + | chr3_1:89551978-89551997 | None:intergenic | 40.0% |
| ! | CACTTCAGGGTCGTATTTTA+AGG | + | chr3_1:89551989-89552008 | None:intergenic | 40.0% |
| CTTAAAATACGACCCTGAAG+TGG | - | chr3_1:89551987-89552006 | Msa0385830:intron | 40.0% | |
| GATGATATAAGGTCCACTTC+AGG | + | chr3_1:89552003-89552022 | None:intergenic | 40.0% | |
| !! | TTACAAGGCACTGATAGTCA+TGG | + | chr3_1:89552104-89552123 | None:intergenic | 40.0% |
| ! | TTCAGCCTCTAGAGAATCAT+TGG | + | chr3_1:89552154-89552173 | None:intergenic | 40.0% |
| ! | TTTGTTGTCAAATCCCAACG+GGG | - | chr3_1:89552320-89552339 | Msa0385830:intron | 40.0% |
| GGATTGAGGATGAATTTGGA+TGG | - | chr3_1:89552365-89552384 | Msa0385830:intron | 40.0% | |
| ATGAAATAAGGGAACCCACT+TGG | - | chr3_1:89552794-89552813 | Msa0385830:intron | 40.0% | |
| TGAAATAAGGGAACCCACTT+GGG | - | chr3_1:89552795-89552814 | Msa0385830:intron | 40.0% | |
| ATTGAACCTAAGACCTTGAG+AGG | + | chr3_1:89552860-89552879 | None:intergenic | 40.0% | |
| TTCTCTCTGTTGCCAATTTC+GGG | - | chr3_1:89552879-89552898 | Msa0385830:intron | 40.0% | |
| GAGACCTTCGTATTTAGACT+AGG | - | chr3_1:89553070-89553089 | Msa0385830:intron | 40.0% | |
| TGGACCTAGTCTAAATACGA+AGG | + | chr3_1:89553077-89553096 | None:intergenic | 40.0% | |
| TCCATATTACAGACTGCACT+TGG | - | chr3_1:89553093-89553112 | Msa0385830:intron | 40.0% | |
| ACCAAGTGCAGTCTGTAATA+TGG | + | chr3_1:89553097-89553116 | None:intergenic | 40.0% | |
| AAGTTCGATCCACTTCTTTC+TGG | - | chr3_1:89553215-89553234 | Msa0385830:intron | 40.0% | |
| AAATCTGCACCAGAAAGAAG+TGG | + | chr3_1:89553227-89553246 | None:intergenic | 40.0% | |
| CCAGAAAATGCAAGCATATC+AGG | + | chr3_1:89553253-89553272 | None:intergenic | 40.0% | |
| ! | CCTGATATGCTTGCATTTTC+TGG | - | chr3_1:89553250-89553269 | Msa0385830:intron | 40.0% |
| ! | GCATTTTCTGGATGTGACTA+TGG | - | chr3_1:89553262-89553281 | Msa0385830:intron | 40.0% |
| ! | TTTTCTGGATGTGACTATGG+TGG | - | chr3_1:89553265-89553284 | Msa0385830:intron | 40.0% |
| AGAGAAGGAACATAAGGAAC+TGG | - | chr3_1:89553291-89553310 | Msa0385830:intron | 40.0% | |
| GAGAAGGAACATAAGGAACT+GGG | - | chr3_1:89553292-89553311 | Msa0385830:intron | 40.0% | |
| GATGGAAGACACTACATGTA+AGG | - | chr3_1:89553329-89553348 | Msa0385830:intron | 40.0% | |
| TGGCTAGATGCCAAGTAAAT+AGG | - | chr3_1:89553576-89553595 | Msa0385830:CDS | 40.0% | |
| TTTCTCATGCAAACATGGTC+AGG | + | chr3_1:89553626-89553645 | None:intergenic | 40.0% | |
| TGCAGAAAAGCAATCCTGAT+AGG | - | chr3_1:89553691-89553710 | Msa0385830:intron | 40.0% | |
| GCAGAAAAGCAATCCTGATA+GGG | - | chr3_1:89553692-89553711 | Msa0385830:intron | 40.0% | |
| !! | AAATGGTTCTAGTTCCTCCT+TGG | + | chr3_1:89553898-89553917 | None:intergenic | 40.0% |
| CTAAAATATTAGCCGGACGA+AGG | - | chr3_1:89554006-89554025 | Msa0385830:intron | 40.0% | |
| TGAACAGAAGTAACTCGACT+TGG | - | chr3_1:89554190-89554209 | Msa0385830:intron | 40.0% | |
| GAACAGAAGTAACTCGACTT+GGG | - | chr3_1:89554191-89554210 | Msa0385830:intron | 40.0% | |
| ! | TTTCTGGAAAGTACGAACAC+TGG | + | chr3_1:89554229-89554248 | None:intergenic | 40.0% |
| AGTGTTCGTACTTTCCAGAA+AGG | - | chr3_1:89554228-89554247 | Msa0385830:intron | 40.0% | |
| TACTTTCCAGAAAGGCTTCA+TGG | - | chr3_1:89554236-89554255 | Msa0385830:intron | 40.0% | |
| ACTTTCCAGAAAGGCTTCAT+GGG | - | chr3_1:89554237-89554256 | Msa0385830:intron | 40.0% | |
| TCTTCACATATGCAGGTAGA+TGG | + | chr3_1:89554309-89554328 | None:intergenic | 40.0% | |
| CACAGAATCTTCACATATGC+AGG | + | chr3_1:89554316-89554335 | None:intergenic | 40.0% | |
| CTGCATATGTGAAGATTCTG+TGG | - | chr3_1:89554314-89554333 | Msa0385830:intron | 40.0% | |
| TGAAGATTCTGTGGCCAAAT+TGG | - | chr3_1:89554323-89554342 | Msa0385830:intron | 40.0% | |
| AGTTGTAGCAAATGATGAGG+TGG | - | chr3_1:89554395-89554414 | Msa0385830:intron | 40.0% | |
| !! | GGATGTTGATGATAATGACG+AGG | - | chr3_1:89554416-89554435 | Msa0385830:intron | 40.0% |
| GTTATGTCGAATGAGTCAAC+AGG | + | chr3_1:89554597-89554616 | None:intergenic | 40.0% | |
| GATCAGAAGTTAGCAATGAG+TGG | - | chr3_1:89554852-89554871 | Msa0385830:intron | 40.0% | |
| GAAGTTAGCAATGAGTGGAA+TGG | - | chr3_1:89554857-89554876 | Msa0385830:intron | 40.0% | |
| GTATGCAGCTAGATGTCAAA+TGG | + | chr3_1:89554891-89554910 | None:intergenic | 40.0% | |
| !! | AATGGAGTTTGCTAGGATGT+AGG | - | chr3_1:89554913-89554932 | Msa0385830:intron | 40.0% |
| TCGGGCACAAAAACTTAACT+AGG | + | chr3_1:89555044-89555063 | None:intergenic | 40.0% | |
| CGAAGTTAATGTAGCAGTAG+TGG | - | chr3_1:89555061-89555080 | Msa0385830:intron | 40.0% | |
| AAAGACTAACTACACCTACC+GGG | + | chr3_1:89555095-89555114 | None:intergenic | 40.0% | |
| !! | GGAAGCGTTGATAAAAGTGG+TGG | + | chr3_1:89547668-89547687 | None:intergenic | 45.0% |
| !! | GACGGAAGCGTTGATAAAAG+TGG | + | chr3_1:89547671-89547690 | None:intergenic | 45.0% |
| GAAGAGAAAAAGTAGAGCGG+CGG | + | chr3_1:89547721-89547740 | None:intergenic | 45.0% | |
| TGATCGGAATCGATAGGAGA+AGG | + | chr3_1:89547765-89547784 | None:intergenic | 45.0% | |
| AAAACCTGAGTTCCGTGTTC+CGG | - | chr3_1:89547943-89547962 | Msa0385830:three_prime_UTR | 45.0% | |
| !!! | GTTCCGGTTAGTGCTTTTTC+TGG | - | chr3_1:89547959-89547978 | Msa0385830:three_prime_UTR | 45.0% |
| ! | AAGAACTGGGGTACTTTCTC+TGG | - | chr3_1:89548311-89548330 | Msa0385830:CDS | 45.0% |
| !! | GGGACTAAATTTGTTGGAGC+TGG | - | chr3_1:89548514-89548533 | Msa0385830:CDS | 45.0% |
| TTTCTCGAGTCTAGTGCTCA+TGG | - | chr3_1:89548594-89548613 | Msa0385830:CDS | 45.0% | |
| ! | AAGTCTTGTCCCACTAAGTG+GGG | + | chr3_1:89548682-89548701 | None:intergenic | 45.0% |
| ! | CAAGTCTTGTCCCACTAAGT+GGG | + | chr3_1:89548683-89548702 | None:intergenic | 45.0% |
| AATTGGATCAGCGGTCTTAC+TGG | - | chr3_1:89549031-89549050 | Msa0385830:CDS | 45.0% | |
| AAGCAACTCCCAAGCAGTAA+GGG | - | chr3_1:89549247-89549266 | Msa0385830:intron | 45.0% | |
| !!! | ACACGCTTTTTCACGAGTAC+AGG | + | chr3_1:89549349-89549368 | None:intergenic | 45.0% |
| TTACTTCAGGCACCACACAT+CGG | + | chr3_1:89549677-89549696 | None:intergenic | 45.0% | |
| AAGCTGTAGTCTGTACCAAC+TGG | - | chr3_1:89550076-89550095 | Msa0385830:intron | 45.0% | |
| TTGACTACAGGCTTGCAAAC+AGG | - | chr3_1:89550250-89550269 | Msa0385830:intron | 45.0% | |
| TCTTTCTCATCCTCATCCGT+TGG | + | chr3_1:89550368-89550387 | None:intergenic | 45.0% | |
| GCATACATTTGGAGGAATGG+AGG | + | chr3_1:89551472-89551491 | None:intergenic | 45.0% | |
| CCTACTATCACATTTGAGGG+GGG | + | chr3_1:89551583-89551602 | None:intergenic | 45.0% | |
| ATGTGATAGTAGGTGAGCCA+AGG | - | chr3_1:89551590-89551609 | Msa0385830:intron | 45.0% | |
| GTCTAAGAAACAACCTCTGG+TGG | + | chr3_1:89551945-89551964 | None:intergenic | 45.0% | |
| GTGGTCTAAGAAACAACCTC+TGG | + | chr3_1:89551948-89551967 | None:intergenic | 45.0% | |
| ACCACCAAGAAACCAACTCA+TGG | - | chr3_1:89551963-89551982 | Msa0385830:intron | 45.0% | |
| !! | AAGGCCATGAGTTGGTTTCT+TGG | + | chr3_1:89551970-89551989 | None:intergenic | 45.0% |
| TTGTTGTCAAATCCCAACGG+GGG | - | chr3_1:89552321-89552340 | Msa0385830:intron | 45.0% | |
| CCAATTTACATTCCCCCGTT+GGG | + | chr3_1:89552336-89552355 | None:intergenic | 45.0% | |
| CCAACGGGGGAATGTAAATT+GGG | - | chr3_1:89552334-89552353 | Msa0385830:intron | 45.0% | |
| ATATTCCGACCGTGTGAACA+CGG | + | chr3_1:89552394-89552413 | None:intergenic | 45.0% | |
| TCACACGGTCGGAATATCAA+TGG | - | chr3_1:89552397-89552416 | Msa0385830:CDS | 45.0% | |
| ! | TACAGACTGCACTTGGTAGT+TGG | - | chr3_1:89553100-89553119 | Msa0385830:intron | 45.0% |
| TGGAGGAGAGAAGGAACATA+AGG | - | chr3_1:89553285-89553304 | Msa0385830:intron | 45.0% | |
| ATAAGGAACTGGGCGCAATA+AGG | - | chr3_1:89553302-89553321 | Msa0385830:intron | 45.0% | |
| ATGGTCTTTAACCCTGCTTG+TGG | - | chr3_1:89553556-89553575 | Msa0385830:CDS | 45.0% | |
| ! | CATTAGACCGACTTCTTCTG+GGG | + | chr3_1:89553745-89553764 | None:intergenic | 45.0% |
| ! | GCATTAGACCGACTTCTTCT+GGG | + | chr3_1:89553746-89553765 | None:intergenic | 45.0% |
| ! | AGCATTAGACCGACTTCTTC+TGG | + | chr3_1:89553747-89553766 | None:intergenic | 45.0% |
| !! | GGTCTAATGCTAAGAGCGTT+GGG | - | chr3_1:89553756-89553775 | Msa0385830:CDS | 45.0% |
| !! | GTCTAATGCTAAGAGCGTTG+GGG | - | chr3_1:89553757-89553776 | Msa0385830:CDS | 45.0% |
| ! | GCATCTGGGGAAGTATATAG+AGG | - | chr3_1:89553807-89553826 | Msa0385830:intron | 45.0% |
| AGAAACCATTGCTACCAAGG+AGG | - | chr3_1:89553881-89553900 | Msa0385830:intron | 45.0% | |
| ! | TAGTTCCTCCTTGGTAGCAA+TGG | + | chr3_1:89553889-89553908 | None:intergenic | 45.0% |
| AAGTTGAGCATACCTTCGTC+CGG | + | chr3_1:89554021-89554040 | None:intergenic | 45.0% | |
| CTTTCCAGAAAGGCTTCATG+GGG | - | chr3_1:89554238-89554257 | Msa0385830:intron | 45.0% | |
| TTTCCAGAAAGGCTTCATGG+GGG | - | chr3_1:89554239-89554258 | Msa0385830:intron | 45.0% | |
| ! | GAACTTTGAGGATCCAGAGT+TGG | - | chr3_1:89554524-89554543 | Msa0385830:intron | 45.0% |
| ATCGAGCACTAGCTGCTTAA+GGG | + | chr3_1:89554620-89554639 | None:intergenic | 45.0% | |
| AATCGAGCACTAGCTGCTTA+AGG | + | chr3_1:89554621-89554640 | None:intergenic | 45.0% | |
| TTAGCAATGAGTGGAATGGG+AGG | - | chr3_1:89554861-89554880 | Msa0385830:intron | 45.0% | |
| !! | TTAATATAAAATACTAAATT+TGG | - | chr3_1:89552475-89552494 | Msa0385830:CDS | 5.0% |
| !! | TTAAAAAAATGAAATAAATA+AGG | - | chr3_1:89552917-89552936 | Msa0385830:intron | 5.0% |
| !! | TAAAAAAATGAAATAAATAA+GGG | - | chr3_1:89552918-89552937 | Msa0385830:intron | 5.0% |
| GCGTCTCCGGTGTATATGAT+CGG | + | chr3_1:89547781-89547800 | None:intergenic | 50.0% | |
| TTCTCGAACTCCACACATCG+CGG | + | chr3_1:89548086-89548105 | None:intergenic | 50.0% | |
| !! | CGTACTTGGAAACTTGCTGC+TGG | + | chr3_1:89548139-89548158 | None:intergenic | 50.0% |
| TTCAGCGTCTGCGATTGGAA+AGG | + | chr3_1:89548232-89548251 | None:intergenic | 50.0% | |
| ! | CCAAGTCTTGTCCCACTAAG+TGG | + | chr3_1:89548684-89548703 | None:intergenic | 50.0% |
| CCACTTAGTGGGACAAGACT+TGG | - | chr3_1:89548681-89548700 | Msa0385830:intron | 50.0% | |
| ! | GTTTTCAGATCCTACCCGCT+TGG | - | chr3_1:89548740-89548759 | Msa0385830:intron | 50.0% |
| AACAGAAAAGCCAAGCGGGT+AGG | + | chr3_1:89548753-89548772 | None:intergenic | 50.0% | |
| CAAGCAACTCCCAAGCAGTA+AGG | - | chr3_1:89549246-89549265 | Msa0385830:intron | 50.0% | |
| AACTCCCAAGCAGTAAGGGT+CGG | - | chr3_1:89549251-89549270 | Msa0385830:intron | 50.0% | |
| CTTTCCGACCCTTACTGCTT+GGG | + | chr3_1:89549258-89549277 | None:intergenic | 50.0% | |
| TGCATTTCCTTGGAACACGC+AGG | + | chr3_1:89549297-89549316 | None:intergenic | 50.0% | |
| TACTTCAGGCACCACACATC+GGG | + | chr3_1:89549676-89549695 | None:intergenic | 50.0% | |
| CTACAGGCTTGCAAACAGGT+TGG | - | chr3_1:89550254-89550273 | Msa0385830:intron | 50.0% | |
| CCTTGCCAAGGCTAAAACCT+TGG | + | chr3_1:89551205-89551224 | None:intergenic | 50.0% | |
| !!! | CCAAGGTTTTAGCCTTGGCA+AGG | - | chr3_1:89551202-89551221 | Msa0385830:intron | 50.0% |
| ACTATCACATTTGAGGGGGG+AGG | + | chr3_1:89551580-89551599 | None:intergenic | 50.0% | |
| CCCCCCTCAAATGTGATAGT+AGG | - | chr3_1:89551580-89551599 | Msa0385830:intron | 50.0% | |
| AGAGGCTAAATCGAGTAGCC+AGG | + | chr3_1:89551909-89551928 | None:intergenic | 50.0% | |
| GGTGGCTATATCTAGTGCAG+AGG | + | chr3_1:89551927-89551946 | None:intergenic | 50.0% | |
| GCACTAGATATAGCCACCAG+AGG | - | chr3_1:89551929-89551948 | Msa0385830:intron | 50.0% | |
| !! | GCCATGAGTTGGTTTCTTGG+TGG | + | chr3_1:89551967-89551986 | None:intergenic | 50.0% |
| TTCCCAATCTGCATCACAGC+AGG | - | chr3_1:89552032-89552051 | Msa0385830:intron | 50.0% | |
| AGCCTGCTGTGATGCAGATT+GGG | + | chr3_1:89552037-89552056 | None:intergenic | 50.0% | |
| TGCATCACAGCAGGCTGTTA+TGG | - | chr3_1:89552041-89552060 | Msa0385830:intron | 50.0% | |
| CCCAACGGGGGAATGTAAAT+TGG | - | chr3_1:89552333-89552352 | Msa0385830:intron | 50.0% | |
| CCCAATTTACATTCCCCCGT+TGG | + | chr3_1:89552337-89552356 | None:intergenic | 50.0% | |
| TATTCCGACCGTGTGAACAC+GGG | + | chr3_1:89552393-89552412 | None:intergenic | 50.0% | |
| ATCACCAGGCTAACCCAAGT+GGG | + | chr3_1:89552811-89552830 | None:intergenic | 50.0% | |
| !! | TTGGGTTAGCCTGGTGATGT+TGG | - | chr3_1:89552813-89552832 | Msa0385830:intron | 50.0% |
| ! | TTAGCCTGGTGATGTTGGCT+TGG | - | chr3_1:89552818-89552837 | Msa0385830:intron | 50.0% |
| !! | TAGCCTGGTGATGTTGGCTT+GGG | - | chr3_1:89552819-89552838 | Msa0385830:intron | 50.0% |
| TGTGCTCCTCTCAAGGTCTT+AGG | - | chr3_1:89552851-89552870 | Msa0385830:intron | 50.0% | |
| CTGTTGCCAATTTCGGGAGT+TGG | - | chr3_1:89552885-89552904 | Msa0385830:intron | 50.0% | |
| ! | GCCAATTTCGGGAGTTGGTT+TGG | - | chr3_1:89552890-89552909 | Msa0385830:intron | 50.0% |
| GCCAAACCAACTCCCGAAAT+TGG | + | chr3_1:89552894-89552913 | None:intergenic | 50.0% | |
| TCTGGATGTGACTATGGTGG+AGG | - | chr3_1:89553268-89553287 | Msa0385830:intron | 50.0% | |
| ! | TGACTATGGTGGAGGAGAGA+AGG | - | chr3_1:89553276-89553295 | Msa0385830:intron | 50.0% |
| TTGGCATCTAGCCACAAGCA+GGG | + | chr3_1:89553570-89553589 | None:intergenic | 50.0% | |
| AAAGCAATCCTGATAGGGCC+AGG | - | chr3_1:89553697-89553716 | Msa0385830:intron | 50.0% | |
| !! | CCGACTTCTTCTGGGGTTAA+CGG | + | chr3_1:89553738-89553757 | None:intergenic | 50.0% |
| CCGTTAACCCCAGAAGAAGT+CGG | - | chr3_1:89553735-89553754 | Msa0385830:CDS | 50.0% | |
| ! | CGGTCTAATGCTAAGAGCGT+TGG | - | chr3_1:89553755-89553774 | Msa0385830:CDS | 50.0% |
| !! | ATGCTAAGAGCGTTGGGGTA+TGG | - | chr3_1:89553762-89553781 | Msa0385830:CDS | 50.0% |
| CTACCAGGTCTAACCTCCTT+TGG | + | chr3_1:89554267-89554286 | None:intergenic | 50.0% | |
| AAGGAGGTTAGACCTGGTAG+AGG | - | chr3_1:89554267-89554286 | Msa0385830:intron | 50.0% | |
| AGGTTAGACCTGGTAGAGGA+GGG | - | chr3_1:89554271-89554290 | Msa0385830:intron | 50.0% | |
| TCATGAAACCCTCCTCTACC+AGG | + | chr3_1:89554282-89554301 | None:intergenic | 50.0% | |
| ! | CTTTGAGGATCCAGAGTTGG+AGG | - | chr3_1:89554527-89554546 | Msa0385830:intron | 50.0% |
| TCGAGCACTAGCTGCTTAAG+GGG | + | chr3_1:89554619-89554638 | None:intergenic | 50.0% | |
| TGGCTGAGCTGAACTTGAAG+TGG | - | chr3_1:89554700-89554719 | Msa0385830:intron | 50.0% | |
| AAAAAGTAGAGCGGCGGCGA+CGG | + | chr3_1:89547715-89547734 | None:intergenic | 55.0% | |
| CTAACCGGAACACGGAACTC+AGG | + | chr3_1:89547950-89547969 | None:intergenic | 55.0% | |
| ATCCTGCTGACCCCACTTAG+TGG | - | chr3_1:89548669-89548688 | Msa0385830:intron | 55.0% | |
| TCCTGCTGACCCCACTTAGT+GGG | - | chr3_1:89548670-89548689 | Msa0385830:intron | 55.0% | |
| GCTTTCCGACCCTTACTGCT+TGG | + | chr3_1:89549259-89549278 | None:intergenic | 55.0% | |
| CATACAGCCTGCGTGTTCCA+AGG | - | chr3_1:89549287-89549306 | Msa0385830:intron | 55.0% | |
| ACTTCAGGCACCACACATCG+GGG | + | chr3_1:89549675-89549694 | None:intergenic | 55.0% | |
| CAGCCTGCTGTGATGCAGAT+TGG | + | chr3_1:89552038-89552057 | None:intergenic | 55.0% | |
| GGATGGATCCCGTGTTCACA+CGG | - | chr3_1:89552382-89552401 | Msa0385830:CDS | 55.0% | |
| CATCACCAGGCTAACCCAAG+TGG | + | chr3_1:89552812-89552831 | None:intergenic | 55.0% | |
| !! | GTGATGTTGGCTTGGGACCT+TGG | - | chr3_1:89552826-89552845 | Msa0385830:intron | 55.0% |
| ! | CTTGAGAGGAGCACACTCCA+AGG | + | chr3_1:89552846-89552865 | None:intergenic | 55.0% |
| CTTGGAGTGTGCTCCTCTCA+AGG | - | chr3_1:89552844-89552863 | Msa0385830:intron | 55.0% | |
| AGGAACTGGGCGCAATAAGG+AGG | - | chr3_1:89553305-89553324 | Msa0385830:intron | 55.0% | |
| TGGGCGCAATAAGGAGGAGA+TGG | - | chr3_1:89553311-89553330 | Msa0385830:intron | 55.0% | |
| CTTGGCATCTAGCCACAAGC+AGG | + | chr3_1:89553571-89553590 | None:intergenic | 55.0% | |
| GAGCCAAAGGAGGTTAGACC+TGG | - | chr3_1:89554261-89554280 | Msa0385830:intron | 55.0% | |
| GAGGTTAGACCTGGTAGAGG+AGG | - | chr3_1:89554270-89554289 | Msa0385830:intron | 55.0% | |
| GCAGTAGTGGTCTGATGACC+CGG | - | chr3_1:89555074-89555093 | Msa0385830:CDS | 55.0% | |
| TAGTGGTCTGATGACCCGGT+AGG | - | chr3_1:89555078-89555097 | Msa0385830:CDS | 55.0% | |
| ! | CCGTGATGTGTTGGCGTCTC+CGG | + | chr3_1:89547794-89547813 | None:intergenic | 60.0% |
| CCGGAGACGCCAACACATCA+CGG | - | chr3_1:89547791-89547810 | Msa0385830:three_prime_UTR | 60.0% | |
| GAAAGCTGAGCCGCGATGTG+TGG | - | chr3_1:89548073-89548092 | Msa0385830:three_prime_UTR | 60.0% | |
| GCTGCTTCAGCGTCTGCGAT+TGG | + | chr3_1:89548237-89548256 | None:intergenic | 60.0% | |
| TCCCACTAAGTGGGGTCAGC+AGG | + | chr3_1:89548674-89548693 | None:intergenic | 60.0% | |
| !! | TCAGCCAGCTGGTCTTCTGC+AGG | - | chr3_1:89551679-89551698 | Msa0385830:intron | 60.0% |
| !! | CAGCCAGCTGGTCTTCTGCA+GGG | - | chr3_1:89551680-89551699 | Msa0385830:intron | 60.0% |
| CATCCCTGCAGAAGACCAGC+TGG | + | chr3_1:89551686-89551705 | None:intergenic | 60.0% | |
| TTTCTGCCGCTGTTGCTGCC+TGG | - | chr3_1:89551888-89551907 | Msa0385830:intron | 60.0% | |
| GAGTAGCCAGGCAGCAACAG+CGG | + | chr3_1:89551897-89551916 | None:intergenic | 60.0% | |
| GGATCCCGTGTTCACACGGT+CGG | - | chr3_1:89552386-89552405 | Msa0385830:CDS | 60.0% | |
| !! | GGAACCCACTTGGGTTAGCC+TGG | - | chr3_1:89552804-89552823 | Msa0385830:intron | 60.0% |
| GGTCCCAAGCCAACATCACC+AGG | + | chr3_1:89552825-89552844 | None:intergenic | 60.0% | |
| GCAATCCTGATAGGGCCAGG+AGG | - | chr3_1:89553700-89553719 | Msa0385830:intron | 60.0% | |
| GCTCCCCCATGAAGCCTTTC+TGG | + | chr3_1:89554245-89554264 | None:intergenic | 60.0% | |
| AGGCTTCATGGGGGAGCCAA+AGG | - | chr3_1:89554248-89554267 | Msa0385830:intron | 60.0% | |
| CTTCATGGGGGAGCCAAAGG+AGG | - | chr3_1:89554251-89554270 | Msa0385830:intron | 60.0% | |
| GCGGCGACGGCGGAAATCAT+CGG | + | chr3_1:89547702-89547721 | None:intergenic | 65.0% | |
| TCCTGATAGGGCCAGGAGGC+AGG | - | chr3_1:89553704-89553723 | Msa0385830:intron | 65.0% | |
| CCTGATAGGGCCAGGAGGCA+GGG | - | chr3_1:89553705-89553724 | Msa0385830:intron | 65.0% | |
| CGGACATCTTCCCTGCCTCC+TGG | + | chr3_1:89553718-89553737 | None:intergenic | 65.0% | |
| AAGTAGAGCGGCGGCGACGG+CGG | + | chr3_1:89547712-89547731 | None:intergenic | 70.0% | |
| CCCTGCCTCCTGGCCCTATC+AGG | + | chr3_1:89553708-89553727 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 89547645 | 89555135 | 89547645 | ID=Msa0385830;Name=Msa0385830 |
| chr3_1 | mRNA | 89547645 | 89555135 | 89547645 | ID=Msa0385830-mRNA-1;Parent=Msa0385830;Name=Msa0385830-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.87|0.88|1|1|1|9|569|522 |
| chr3_1 | exon | 89547645 | 89548652 | 89547645 | ID=Msa0385830-mRNA-1:exon:24449;Parent=Msa0385830-mRNA-1 |
| chr3_1 | exon | 89548753 | 89549084 | 89548753 | ID=Msa0385830-mRNA-1:exon:24448;Parent=Msa0385830-mRNA-1 |
| chr3_1 | exon | 89549435 | 89549537 | 89549435 | ID=Msa0385830-mRNA-1:exon:24447;Parent=Msa0385830-mRNA-1 |
| chr3_1 | exon | 89552368 | 89552549 | 89552368 | ID=Msa0385830-mRNA-1:exon:24446;Parent=Msa0385830-mRNA-1 |
| chr3_1 | exon | 89553414 | 89553600 | 89553414 | ID=Msa0385830-mRNA-1:exon:24445;Parent=Msa0385830-mRNA-1 |
| chr3_1 | exon | 89553716 | 89553804 | 89553716 | ID=Msa0385830-mRNA-1:exon:24444;Parent=Msa0385830-mRNA-1 |
| chr3_1 | exon | 89554460 | 89554536 | 89554460 | ID=Msa0385830-mRNA-1:exon:24443;Parent=Msa0385830-mRNA-1 |
| chr3_1 | exon | 89554627 | 89554717 | 89554627 | ID=Msa0385830-mRNA-1:exon:24442;Parent=Msa0385830-mRNA-1 |
| chr3_1 | exon | 89555067 | 89555135 | 89555067 | ID=Msa0385830-mRNA-1:exon:24441;Parent=Msa0385830-mRNA-1 |
| chr3_1 | CDS | 89555067 | 89555135 | 89555067 | ID=Msa0385830-mRNA-1:cds;Parent=Msa0385830-mRNA-1 |
| chr3_1 | CDS | 89554627 | 89554717 | 89554627 | ID=Msa0385830-mRNA-1:cds;Parent=Msa0385830-mRNA-1 |
| chr3_1 | CDS | 89554460 | 89554536 | 89554460 | ID=Msa0385830-mRNA-1:cds;Parent=Msa0385830-mRNA-1 |
| chr3_1 | CDS | 89553716 | 89553804 | 89553716 | ID=Msa0385830-mRNA-1:cds;Parent=Msa0385830-mRNA-1 |
| chr3_1 | CDS | 89553414 | 89553600 | 89553414 | ID=Msa0385830-mRNA-1:cds;Parent=Msa0385830-mRNA-1 |
| chr3_1 | CDS | 89552368 | 89552549 | 89552368 | ID=Msa0385830-mRNA-1:cds;Parent=Msa0385830-mRNA-1 |
| chr3_1 | CDS | 89549435 | 89549537 | 89549435 | ID=Msa0385830-mRNA-1:cds;Parent=Msa0385830-mRNA-1 |
| chr3_1 | CDS | 89548753 | 89549084 | 89548753 | ID=Msa0385830-mRNA-1:cds;Parent=Msa0385830-mRNA-1 |
| chr3_1 | CDS | 89548214 | 89548652 | 89548214 | ID=Msa0385830-mRNA-1:cds;Parent=Msa0385830-mRNA-1 |
| chr3_1 | three_prime_UTR | 89547645 | 89548213 | 89547645 | ID=Msa0385830-mRNA-1:three_prime_utr;Parent=Msa0385830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
