Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113290 | sp|A0A072VIM5|NOOT2_MEDTR | 91.396 | 523 | 14 | 4 | 1 | 523 | 1 | 492 | 0.0 | 957 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113290 | A0A286R9E6 | 83.270 | 526 | 45 | 8 | 1 | 523 | 1 | 486 | 0.0 | 772 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0113290 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0067970 | Msa0113290 | 0.845361 | 4.261264e-59 | -8.615850e-47 |
| Msa0113290 | Msa0159480 | 0.837401 | 5.311120e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113290 | MtrunA17_Chr1g0171771 | 91.396 | 523 | 14 | 4 | 1 | 523 | 1 | 492 | 0.0 | 957 |
| Msa0113290 | MtrunA17_Chr7g0256321 | 72.336 | 535 | 83 | 10 | 1 | 523 | 1 | 482 | 0.0 | 679 |
| Msa0113290 | MtrunA17_Chr5g0442661 | 33.429 | 350 | 195 | 7 | 2 | 346 | 54 | 370 | 1.60e-46 | 171 |
| Msa0113290 | MtrunA17_Chr2g0291741 | 33.918 | 342 | 205 | 7 | 6 | 346 | 44 | 365 | 2.25e-42 | 159 |
| Msa0113290 | MtrunA17_Chr2g0299621 | 30.581 | 327 | 192 | 6 | 24 | 346 | 65 | 360 | 3.95e-30 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113290 | AT2G41370.1 | 72.727 | 528 | 83 | 10 | 3 | 517 | 4 | 483 | 0.0 | 684 |
| Msa0113290 | AT3G57130.1 | 67.619 | 525 | 93 | 9 | 2 | 522 | 4 | 455 | 0.0 | 660 |
| Msa0113290 | AT3G57130.2 | 74.850 | 167 | 41 | 1 | 2 | 167 | 4 | 170 | 4.29e-84 | 258 |
| Msa0113290 | AT4G19660.1 | 27.536 | 483 | 285 | 10 | 2 | 474 | 41 | 468 | 4.12e-39 | 150 |
| Msa0113290 | AT4G19660.2 | 27.536 | 483 | 285 | 10 | 2 | 474 | 41 | 468 | 5.40e-39 | 150 |
| Msa0113290 | AT5G45110.2 | 30.321 | 343 | 212 | 6 | 6 | 346 | 40 | 357 | 7.22e-35 | 137 |
| Msa0113290 | AT5G45110.1 | 30.321 | 343 | 212 | 6 | 6 | 346 | 40 | 357 | 1.31e-34 | 137 |
| Msa0113290 | AT1G64280.1 | 29.653 | 317 | 193 | 6 | 32 | 346 | 73 | 361 | 1.19e-30 | 126 |
| Msa0113290 | AT4G26120.2 | 29.653 | 317 | 188 | 7 | 33 | 346 | 77 | 361 | 2.08e-29 | 122 |
| Msa0113290 | AT4G26120.1 | 29.653 | 317 | 188 | 7 | 33 | 346 | 76 | 360 | 2.25e-29 | 122 |
Find 161 sgRNAs with CRISPR-Local
Find 606 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACATTGGTAACCTGAATT+TGG | 0.137011 | 1_3:-29105044 | Msa0113290:CDS |
| AGGTGCTTGGCTAGGATTTC+AGG | 0.141453 | 1_3:+29112432 | None:intergenic |
| TAGACGAAGGTCTTCGATTT+TGG | 0.166923 | 1_3:+29112392 | None:intergenic |
| CTCTTCAAAGGTGCTGTTCC+TGG | 0.194491 | 1_3:-29105271 | Msa0113290:CDS |
| TCACTCATTGGAGGGTAAAT+TGG | 0.270490 | 1_3:+29105112 | None:intergenic |
| GCCTCATTCGGCGGATCTTC+TGG | 0.287511 | 1_3:+29112283 | None:intergenic |
| AAACACAATCTTAACTTGTT+TGG | 0.298334 | 1_3:+29105232 | None:intergenic |
| GGCCGTTGATGAGGAGATTC+AGG | 0.300581 | 1_3:+29114757 | None:intergenic |
| TCCCACCTTGTTGCCAAGTC+TGG | 0.333166 | 1_3:-29112462 | Msa0113290:CDS |
| TGAAGAGAAAATCAGAGGTT+AGG | 0.333207 | 1_3:+29105287 | None:intergenic |
| CTAATCTTGAATCCAAATTC+AGG | 0.335934 | 1_3:+29105032 | None:intergenic |
| AAACAAGTTAAGATTGTGTT+TGG | 0.336957 | 1_3:-29105230 | Msa0113290:CDS |
| TTGTGGGCCGGACCCACCTT+CGG | 0.340434 | 1_3:-29114637 | Msa0113290:CDS |
| ACCACCTTGACGACGATTCA+TGG | 0.340475 | 1_3:+29104937 | None:intergenic |
| GAGGATCCTCCTCCTCCTAT+TGG | 0.345044 | 1_3:+29114606 | None:intergenic |
| TGTGGGCCGGACCCACCTTC+GGG | 0.345919 | 1_3:-29114636 | Msa0113290:CDS |
| AGTCAAGGGCCCGCCTCATT+CGG | 0.384222 | 1_3:+29112271 | None:intergenic |
| CCCTCTCGACAACGGCAATA+AGG | 0.397415 | 1_3:+29105511 | None:intergenic |
| CCCTCTCGACAACGGCAATA+AGG | 0.397415 | 1_3:+29111572 | None:intergenic |
| AGGATCCTCCTCCTCCTATT+GGG | 0.401164 | 1_3:+29114607 | None:intergenic |
| CAACCTTGGTGCTACTCAAA+TGG | 0.408123 | 1_3:-29105002 | Msa0113290:CDS |
| GGAACATGTTGTCCAAAGTT+GGG | 0.412725 | 1_3:+29112482 | None:intergenic |
| GGGAACATGTTGTCCAAAGT+TGG | 0.416120 | 1_3:+29112481 | None:intergenic |
| AGCAAGAAATGCCCCAACTT+TGG | 0.416180 | 1_3:-29112494 | Msa0113290:CDS |
| GGAGGGCTTTCACCACTTCT+CGG | 0.427881 | 1_3:+29112154 | None:intergenic |
| AGCAAAACTGCTACCATCTC+TGG | 0.431270 | 1_3:+29112048 | None:intergenic |
| TTTCCAAGTTGAAGGTCGTT+TGG | 0.433438 | 1_3:-29114715 | Msa0113290:CDS |
| CATCCGCAGCACCGAGTTCA+AGG | 0.433898 | 1_3:+29112133 | None:intergenic |
| AACTACCCGGCTGGACCCGC+CGG | 0.434820 | 1_3:-29112108 | Msa0113290:CDS |
| GATGATGGTGATGGTGGTGG+TGG | 0.440460 | 1_3:+29112334 | None:intergenic |
| GATGATGATGGTGATGGTGG+TGG | 0.443920 | 1_3:+29112331 | None:intergenic |
| CCTTCATGTGGCTGCCGAGA+TGG | 0.445464 | 1_3:-29112076 | Msa0113290:CDS |
| CACCCTCTCTCACCACAATT+AGG | 0.446076 | 1_3:+29114456 | None:intergenic |
| GAAGAGAAAATCAGAGGTTA+GGG | 0.447796 | 1_3:+29105288 | None:intergenic |
| CTGCTATGATCTTCACTCAT+TGG | 0.449669 | 1_3:+29105100 | None:intergenic |
| GACGTCACTTTCCAAGTTGA+AGG | 0.452431 | 1_3:-29114723 | Msa0113290:CDS |
| GAGATCTTAGAGTCTCTTCA+AGG | 0.454395 | 1_3:+29114793 | None:intergenic |
| CCCACAGTTAGAACCGTTGA+TGG | 0.458083 | 1_3:-29112009 | Msa0113290:intron |
| GAGGCGGGCCCTTGACTCCT+CGG | 0.472933 | 1_3:-29112265 | Msa0113290:CDS |
| CACTGTACAGAAACTGCAAC+AGG | 0.473588 | 1_3:+29114517 | None:intergenic |
| TCTAGTCCCGAAGGTGGGTC+CGG | 0.476408 | 1_3:+29114630 | None:intergenic |
| GGTTCAATGTGGTTTAATCC+AGG | 0.482214 | 1_3:+29105253 | None:intergenic |
| TTCAGGTGGGAGACCAGACT+TGG | 0.483118 | 1_3:+29112449 | None:intergenic |
| GAACCAAACGACCTTCAACT+TGG | 0.483511 | 1_3:+29114712 | None:intergenic |
| CAAAGTATCTAGCGGCAGCT+AGG | 0.487700 | 1_3:+29114388 | None:intergenic |
| GTGGTGGTGGAGTGGCATTA+AGG | 0.499723 | 1_3:+29112347 | None:intergenic |
| CTAGCTGCCGCTAGATACTT+TGG | 0.502823 | 1_3:-29114387 | Msa0113290:CDS |
| AGTACGACCTGGTGTCATTC+CGG | 0.503385 | 1_3:-29114571 | Msa0113290:CDS |
| CCTTCGGGACTAGACCCAAT+AGG | 0.503671 | 1_3:-29114621 | Msa0113290:CDS |
| CTCTCACCACAATTAGGTCT+AGG | 0.504177 | 1_3:+29114462 | None:intergenic |
| TTTGAGTAGCACCAAGGTTG+AGG | 0.505083 | 1_3:+29105005 | None:intergenic |
| TCCTTATTGCCGTTGTCGAG+AGG | 0.506075 | 1_3:-29105512 | Msa0113290:CDS |
| TCCTTATTGCCGTTGTCGAG+AGG | 0.506075 | 1_3:-29111573 | Msa0113290:CDS |
| GAAGATCCGCCGAATGAGGC+GGG | 0.506861 | 1_3:-29112280 | Msa0113290:CDS |
| TTTCATCACATCGTCTATTG+AGG | 0.507838 | 1_3:+29112536 | None:intergenic |
| TAGCGGCAGCTAGGGTATCA+AGG | 0.512363 | 1_3:+29114397 | None:intergenic |
| TGGTGATGGTGGTGGTGGAG+TGG | 0.521989 | 1_3:+29112339 | None:intergenic |
| CTATGATCTTCACTCATTGG+AGG | 0.522815 | 1_3:+29105103 | None:intergenic |
| AATCGTCGTCAAGGTGGTCA+TGG | 0.523469 | 1_3:-29104932 | Msa0113290:CDS |
| CATCATCATCACCACGACTT+TGG | 0.524100 | 1_3:-29112318 | Msa0113290:CDS |
| CCTTATTGCCGTTGTCGAGA+GGG | 0.525198 | 1_3:-29105511 | Msa0113290:CDS |
| CCTTATTGCCGTTGTCGAGA+GGG | 0.525198 | 1_3:-29111572 | Msa0113290:CDS |
| CGAGATGGTGTCGCCAGAGA+TGG | 0.525304 | 1_3:-29112061 | Msa0113290:CDS |
| AACGTCAATGGAGAGGTGCT+TGG | 0.526797 | 1_3:+29112419 | None:intergenic |
| AACAATAATAACAACAACAT+TGG | 0.526906 | 1_3:-29105058 | Msa0113290:CDS |
| GAGAGTGATGATACATTGTT+GGG | 0.530555 | 1_3:+29104903 | None:intergenic |
| AAACTCATGGTCATGGGAGA+AGG | 0.530916 | 1_3:-29112228 | Msa0113290:CDS |
| AAGTGACGTCGCTGAAGGCT+TGG | 0.531189 | 1_3:+29114736 | None:intergenic |
| CATTAAGGAGCGGCGTGCTA+AGG | 0.535278 | 1_3:+29112362 | None:intergenic |
| GCGGATGTTAACTACCCGGC+TGG | 0.535668 | 1_3:-29112117 | Msa0113290:CDS |
| GCTACATGAAAGCTTTATCC+AGG | 0.539736 | 1_3:-29105489 | Msa0113290:intron |
| GCTACATGAAAGCTTTATCC+AGG | 0.539736 | 1_3:-29111550 | Msa0113290:intron |
| AAAGTATCTAGCGGCAGCTA+GGG | 0.539768 | 1_3:+29114389 | None:intergenic |
| ACTAGTCAAACTCATGGTCA+TGG | 0.542747 | 1_3:-29112235 | Msa0113290:CDS |
| GTTCGACATCCGAGGAGTCA+AGG | 0.544297 | 1_3:+29112256 | None:intergenic |
| TGCTTGGCTAGGATTTCAGG+TGG | 0.547432 | 1_3:+29112435 | None:intergenic |
| CAATGGAGAGGTGCTTGGCT+AGG | 0.548508 | 1_3:+29112424 | None:intergenic |
| TTCGACATCCGAGGAGTCAA+GGG | 0.549310 | 1_3:+29112257 | None:intergenic |
| TTGGAAAGTGACGTCGCTGA+AGG | 0.550213 | 1_3:+29114731 | None:intergenic |
| TGAGAGTGATGATACATTGT+TGG | 0.550269 | 1_3:+29104902 | None:intergenic |
| TCTAAACCTTGATGAAGCAT+TGG | 0.553658 | 1_3:-29112205 | Msa0113290:CDS |
| CTAGACCCAATAGGAGGAGG+AGG | 0.555801 | 1_3:-29114612 | Msa0113290:CDS |
| ACTACCCGGCTGGACCCGCC+GGG | 0.556122 | 1_3:-29112107 | Msa0113290:CDS |
| TGAAGGCTTGGCCGTTGATG+AGG | 0.557454 | 1_3:+29114748 | None:intergenic |
| GTCATTCCGGTGAACTCAGT+CGG | 0.558544 | 1_3:-29114558 | Msa0113290:CDS |
| TGAGGAGATTCAGGTAGTCA+AGG | 0.559086 | 1_3:+29114766 | None:intergenic |
| CCATCTCGGCAGCCACATGA+AGG | 0.559458 | 1_3:+29112076 | None:intergenic |
| ACCAGAAGATCCGCCGAATG+AGG | 0.562667 | 1_3:-29112284 | Msa0113290:CDS |
| CCTCCTTGAACTCGGTGCTG+CGG | 0.564936 | 1_3:-29112136 | Msa0113290:CDS |
| GTGAAAGCCCTCCTTGAACT+CGG | 0.565470 | 1_3:-29112144 | Msa0113290:CDS |
| GATCATAGCAGCAGTAGCAG+TGG | 0.565707 | 1_3:-29105088 | Msa0113290:CDS |
| CAAGGGCCCGCCTCATTCGG+CGG | 0.566384 | 1_3:+29112274 | None:intergenic |
| GAGGAGATTCAGGTAGTCAA+GGG | 0.566596 | 1_3:+29114767 | None:intergenic |
| ACAGAAACTGCAACAGGAGG+AGG | 0.567674 | 1_3:+29114523 | None:intergenic |
| ACAGCTTGCATTGCTCACTC+AGG | 0.569799 | 1_3:-29114358 | Msa0113290:intron |
| TAAGGAGCGGCGTGCTAAGG+AGG | 0.570125 | 1_3:+29112365 | None:intergenic |
| CGCAGCACCGAGTTCAAGGA+GGG | 0.571055 | 1_3:+29112137 | None:intergenic |
| CTGTTGCAGTTTCTGTACAG+TGG | 0.573942 | 1_3:-29114516 | Msa0113290:CDS |
| AGAAGATCCGCCGAATGAGG+CGG | 0.577712 | 1_3:-29112281 | Msa0113290:CDS |
| AGATCTTAGAGTCTCTTCAA+GGG | 0.579610 | 1_3:+29114794 | None:intergenic |
| CTAGTCAAACTCATGGTCAT+GGG | 0.581311 | 1_3:-29112234 | Msa0113290:CDS |
| CGGGAAAACTTCCCTTCATG+TGG | 0.583747 | 1_3:-29112088 | Msa0113290:CDS |
| GGTCTAGGCTCATGTTTCTG+AGG | 0.584293 | 1_3:+29114477 | None:intergenic |
| ATTGGGTCTAGTCCCGAAGG+TGG | 0.584493 | 1_3:+29114624 | None:intergenic |
| GACCTAATTGTGGTGAGAGA+GGG | 0.584783 | 1_3:-29114458 | Msa0113290:CDS |
| AGATTAGTGTACCTCAACCT+TGG | 0.585256 | 1_3:-29105016 | Msa0113290:CDS |
| GGTGATGATGATGGTGATGG+TGG | 0.585530 | 1_3:+29112328 | None:intergenic |
| ACCATCAACGGTTCTAACTG+TGG | 0.586558 | 1_3:+29112008 | None:intergenic |
| GTAATGCCAATGCTTCATCA+AGG | 0.588210 | 1_3:+29112199 | None:intergenic |
| AAGGGCAAGATCAACGGCTG+AGG | 0.588511 | 1_3:+29114416 | None:intergenic |
| AGACCTAATTGTGGTGAGAG+AGG | 0.589965 | 1_3:-29114459 | Msa0113290:CDS |
| CAAAGGTGTCACACCATCAA+CGG | 0.592905 | 1_3:+29111996 | None:intergenic |
| TGAGAATTGTAGCCGAGAAG+TGG | 0.593437 | 1_3:-29112166 | Msa0113290:CDS |
| CCTATTGGGTCTAGTCCCGA+AGG | 0.597805 | 1_3:+29114621 | None:intergenic |
| GCAGAAGCAACTAGTGAGCA+TGG | 0.601200 | 1_3:-29112568 | Msa0113290:intron |
| CCATCAACGGTTCTAACTGT+GGG | 0.604614 | 1_3:+29112009 | None:intergenic |
| CGTGGTGATGATGATGGTGA+TGG | 0.605066 | 1_3:+29112325 | None:intergenic |
| TATGATCTTCACTCATTGGA+GGG | 0.606499 | 1_3:+29105104 | None:intergenic |
| ACCAGACTTGGCAACAAGGT+GGG | 0.607953 | 1_3:+29112461 | None:intergenic |
| CAAAGTCGTGGTGATGATGA+TGG | 0.608219 | 1_3:+29112319 | None:intergenic |
| GGACTAGACCCAATAGGAGG+AGG | 0.611118 | 1_3:-29114615 | Msa0113290:CDS |
| GAGTTCACCGGAATGACACC+AGG | 0.611897 | 1_3:+29114564 | None:intergenic |
| GGTATCAAGGGCAAGATCAA+CGG | 0.613359 | 1_3:+29114410 | None:intergenic |
| ATCGCTGCATCTTAGCAGCA+AGG | 0.614656 | 1_3:-29114683 | Msa0113290:CDS |
| TTTGACTAGTTCGACATCCG+AGG | 0.618914 | 1_3:+29112248 | None:intergenic |
| ACCTTTGAAGAGAAAATCAG+AGG | 0.620921 | 1_3:+29105282 | None:intergenic |
| TACCTGAATCTCCTCATCAA+CGG | 0.622639 | 1_3:-29114759 | Msa0113290:CDS |
| CTTGGTGCTACTCAAATGGA+TGG | 0.623070 | 1_3:-29104998 | Msa0113290:CDS |
| AGCGGCAGCTAGGGTATCAA+GGG | 0.623566 | 1_3:+29114398 | None:intergenic |
| GAAGCCATGAATCGTCGTCA+AGG | 0.625063 | 1_3:-29104941 | Msa0113290:CDS |
| TTCTAACTGTGGGATCTGCA+TGG | 0.627211 | 1_3:+29112019 | None:intergenic |
| TCGTAGCCGACTGAGTTCAC+CGG | 0.627960 | 1_3:+29114552 | None:intergenic |
| ACAACGGCAATAAGGAGAGA+AGG | 0.629591 | 1_3:+29105519 | None:intergenic |
| ACAACGGCAATAAGGAGAGA+AGG | 0.629591 | 1_3:+29111580 | None:intergenic |
| GAACATGTTGTCCAAAGTTG+GGG | 0.630070 | 1_3:+29112483 | None:intergenic |
| TCATGTAGCCCTCTCGACAA+CGG | 0.631243 | 1_3:+29105503 | None:intergenic |
| TCATGTAGCCCTCTCGACAA+CGG | 0.631243 | 1_3:+29111564 | None:intergenic |
| CATCTCTGGCGACACCATCT+CGG | 0.633216 | 1_3:+29112062 | None:intergenic |
| TGGCGACAACGTCAATGGAG+AGG | 0.634502 | 1_3:+29112412 | None:intergenic |
| TGTCGAACTAGTCAAACTCA+TGG | 0.636426 | 1_3:-29112241 | Msa0113290:CDS |
| TTGGGTCTAGTCCCGAAGGT+GGG | 0.636525 | 1_3:+29114625 | None:intergenic |
| GGTGGAGTGGCATTAAGGAG+CGG | 0.636797 | 1_3:+29112352 | None:intergenic |
| GGAGACCAGACTTGGCAACA+AGG | 0.637078 | 1_3:+29112457 | None:intergenic |
| TCGTACTGTCGGCTGACGAG+AGG | 0.637585 | 1_3:+29114587 | None:intergenic |
| ATTGTGGTGAGAGAGGGTGC+TGG | 0.639310 | 1_3:-29114452 | Msa0113290:CDS |
| CATCTCGGCAGCCACATGAA+GGG | 0.642619 | 1_3:+29112077 | None:intergenic |
| TTAACTTGTTTGGTTCAATG+TGG | 0.643585 | 1_3:+29105242 | None:intergenic |
| ATGACACCAGGTCGTACTGT+CGG | 0.652727 | 1_3:+29114576 | None:intergenic |
| CATGAGCCTAGACCTAATTG+TGG | 0.655015 | 1_3:-29114468 | Msa0113290:CDS |
| CGTCAGCCGACAGTACGACC+TGG | 0.655540 | 1_3:-29114582 | Msa0113290:CDS |
| CCGCAGCACCGAGTTCAAGG+AGG | 0.656382 | 1_3:+29112136 | None:intergenic |
| CTTCGAAGTCACCAAAGTCG+TGG | 0.659191 | 1_3:+29112307 | None:intergenic |
| GACCAGACTTGGCAACAAGG+TGG | 0.659215 | 1_3:+29112460 | None:intergenic |
| TCGGGACTAGACCCAATAGG+AGG | 0.661393 | 1_3:-29114618 | Msa0113290:CDS |
| TGCTGCGGATGTTAACTACC+CGG | 0.669914 | 1_3:-29112121 | Msa0113290:CDS |
| TTCAACGCCAAAGTATCTAG+CGG | 0.678772 | 1_3:+29114380 | None:intergenic |
| TGTACAGAAACTGCAACAGG+AGG | 0.681852 | 1_3:+29114520 | None:intergenic |
| GCTTGGCTAGGATTTCAGGT+GGG | 0.683050 | 1_3:+29112436 | None:intergenic |
| CATCCATTTGAGTAGCACCA+AGG | 0.686782 | 1_3:+29104999 | None:intergenic |
| GCCATGAATCGTCGTCAAGG+TGG | 0.689108 | 1_3:-29104938 | Msa0113290:CDS |
| GGTGAACTCAGTCGGCTACG+AGG | 0.709456 | 1_3:-29114550 | Msa0113290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAATTTTTTAGTTTTG+GGG | + | chr1_3:29105997-29106016 | None:intergenic | 10.0% |
| !!! | GTTTTAAATTTTTTAGTTTT+GGG | + | chr1_3:29105998-29106017 | None:intergenic | 10.0% |
| !!! | TGTTTTAAATTTTTTAGTTT+TGG | + | chr1_3:29105999-29106018 | None:intergenic | 10.0% |
| !!! | AATTTTTAAAATTACAGTTT+TGG | + | chr1_3:29106026-29106045 | None:intergenic | 10.0% |
| !!! | AAATATTTAATTAGTTGATA+TGG | - | chr1_3:29107871-29107890 | Msa0113290:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTCTTC+TGG | - | chr1_3:29108841-29108860 | Msa0113290:intron | 10.0% |
| !!! | AATTATATCATGAATATTTT+TGG | - | chr1_3:29109563-29109582 | Msa0113290:intron | 10.0% |
| !! | TAAAATATCATATATATTAG+AGG | - | chr1_3:29111178-29111197 | Msa0113290:intron | 10.0% |
| !! | TACTATTATTATAGTATATT+TGG | - | chr1_3:29112048-29112067 | Msa0113290:CDS | 10.0% |
| !!! | AAATATTTAATTAGTTGATA+TGG | - | chr1_3:29107871-29107890 | Msa0113290:intron | 10.0% |
| !!! | TTTTTAGTCAACTTTTTTTT+TGG | - | chr1_3:29105578-29105597 | Msa0113290:intron | 15.0% |
| !!! | TTTTAGTCAACTTTTTTTTT+GGG | - | chr1_3:29105579-29105598 | Msa0113290:intron | 15.0% |
| !!! | TTTTATTTTTGAGTCTATAT+AGG | - | chr1_3:29105664-29105683 | Msa0113290:intron | 15.0% |
| !!! | TTTATTTTTGAGTCTATATA+GGG | - | chr1_3:29105665-29105684 | Msa0113290:intron | 15.0% |
| !!! | AAAAACTAAAAAAGTGTTTT+TGG | - | chr1_3:29106080-29106099 | Msa0113290:intron | 15.0% |
| !!! | AAAACTAAAAAAGTGTTTTT+GGG | - | chr1_3:29106081-29106100 | Msa0113290:intron | 15.0% |
| !! | TACATATTAGACTTATAATT+TGG | - | chr1_3:29106123-29106142 | Msa0113290:intron | 15.0% |
| !! | AGAAAAATTGTATTGAAAAA+TGG | + | chr1_3:29106650-29106669 | None:intergenic | 15.0% |
| !!! | ATAAAGATTTTTTGTTGTAA+GGG | + | chr1_3:29106980-29106999 | None:intergenic | 15.0% |
| !!! | TATAAAGATTTTTTGTTGTA+AGG | + | chr1_3:29106981-29107000 | None:intergenic | 15.0% |
| !! | ATAATAAAATATTCCAACAA+AGG | + | chr1_3:29107714-29107733 | None:intergenic | 15.0% |
| !! | TATATTCCAATAATATTATG+TGG | - | chr1_3:29107738-29107757 | Msa0113290:intron | 15.0% |
| !! | ATATTCCAATAATATTATGT+GGG | - | chr1_3:29107739-29107758 | Msa0113290:intron | 15.0% |
| !!! | CTATTTTATTTTTTTTGAGA+TGG | - | chr1_3:29108381-29108400 | Msa0113290:intron | 15.0% |
| !!! | AATTATTTCCAATTTAGTTT+TGG | - | chr1_3:29108919-29108938 | Msa0113290:intron | 15.0% |
| !!! | CAATTTTAGTCTTTTATTTA+TGG | - | chr1_3:29109044-29109063 | Msa0113290:intron | 15.0% |
| !!! | ATTTATGGATTTTTTTTTTC+TGG | - | chr1_3:29109059-29109078 | Msa0113290:intron | 15.0% |
| !!! | TGATTTCATATTAAATCTTT+TGG | - | chr1_3:29109148-29109167 | Msa0113290:intron | 15.0% |
| !! | ACAAAGAGTTAATATATATT+TGG | - | chr1_3:29109286-29109305 | Msa0113290:intron | 15.0% |
| !!! | TAATTCTTAAATTTTTCATG+TGG | - | chr1_3:29110490-29110509 | Msa0113290:intron | 15.0% |
| !!! | AATTCTTAAATTTTTCATGT+GGG | - | chr1_3:29110491-29110510 | Msa0113290:intron | 15.0% |
| !! | AACTCTTAAAATTCTAATTT+AGG | - | chr1_3:29111001-29111020 | Msa0113290:intron | 15.0% |
| !! | AGTATTCTATTAAGATTATT+AGG | - | chr1_3:29111306-29111325 | Msa0113290:intron | 15.0% |
| !! | AAAGATATATCAATTTAGAA+TGG | - | chr1_3:29111621-29111640 | Msa0113290:intron | 15.0% |
| !! | TTTGTATTTAAAAGACAATT+TGG | - | chr1_3:29111713-29111732 | Msa0113290:intron | 15.0% |
| !!! | TCAAAATTTTCTTAATTTGT+GGG | + | chr1_3:29111922-29111941 | None:intergenic | 15.0% |
| !!! | TAAATTTTTAAGTTTTCTTG+AGG | - | chr1_3:29111946-29111965 | Msa0113290:intron | 15.0% |
| !!! | TAGTTTGCTTATTATAATTT+TGG | - | chr1_3:29112242-29112261 | Msa0113290:CDS | 15.0% |
| !!! | AAATGAAATGACATAATTTT+TGG | - | chr1_3:29112713-29112732 | Msa0113290:intron | 15.0% |
| !! | AAGTATAGAACATAAAATAA+AGG | + | chr1_3:29113337-29113356 | None:intergenic | 15.0% |
| !! | TAATTATATCAGAATTCTTT+AGG | + | chr1_3:29113729-29113748 | None:intergenic | 15.0% |
| !! | TATATTCCAATAATATTATG+TGG | - | chr1_3:29107738-29107757 | Msa0113290:intron | 15.0% |
| !! | ATATTCCAATAATATTATGT+GGG | - | chr1_3:29107739-29107758 | Msa0113290:intron | 15.0% |
| !!! | TTTAGTCAACTTTTTTTTTG+GGG | - | chr1_3:29105580-29105599 | Msa0113290:intron | 20.0% |
| !! | TATAGAACTACCTAAAATAA+GGG | + | chr1_3:29105613-29105632 | None:intergenic | 20.0% |
| !! | TTATAGAACTACCTAAAATA+AGG | + | chr1_3:29105614-29105633 | None:intergenic | 20.0% |
| !! | AATGCAAAAATGAAATAGAA+GGG | + | chr1_3:29106433-29106452 | None:intergenic | 20.0% |
| !! | AAATGCAAAAATGAAATAGA+AGG | + | chr1_3:29106434-29106453 | None:intergenic | 20.0% |
| !!! | ATAAAGTGATTTGATGATTT+GGG | - | chr1_3:29106747-29106766 | Msa0113290:intron | 20.0% |
| !! | TAAAATATGGCAAATGTTAA+GGG | + | chr1_3:29106889-29106908 | None:intergenic | 20.0% |
| !! | TTAAAATATGGCAAATGTTA+AGG | + | chr1_3:29106890-29106909 | None:intergenic | 20.0% |
| !!! | CTCTGTACAAATTTAAAATA+TGG | + | chr1_3:29106902-29106921 | None:intergenic | 20.0% |
| !! | CTATAAAAGATTACTTCAAT+TGG | - | chr1_3:29107012-29107031 | Msa0113290:intron | 20.0% |
| !! | TATTAGCTATTTATCATTTG+TGG | - | chr1_3:29107783-29107802 | Msa0113290:intron | 20.0% |
| !! | ATTAGCTATTTATCATTTGT+GGG | - | chr1_3:29107784-29107803 | Msa0113290:intron | 20.0% |
| !! | AGTGATCAAATTAAGTAATA+AGG | - | chr1_3:29107819-29107838 | Msa0113290:intron | 20.0% |
| !!! | ATATTAAGAATTAGGGTATT+AGG | + | chr1_3:29108170-29108189 | None:intergenic | 20.0% |
| !! | ATCAAGGATATTAAGAATTA+GGG | + | chr1_3:29108177-29108196 | None:intergenic | 20.0% |
| !! | TATCAAGGATATTAAGAATT+AGG | + | chr1_3:29108178-29108197 | None:intergenic | 20.0% |
| !! | ATATTGAACATGATTATGAT+CGG | + | chr1_3:29108220-29108239 | None:intergenic | 20.0% |
| !! | CAAATTAAAGCAAAGAAAAT+AGG | + | chr1_3:29108561-29108580 | None:intergenic | 20.0% |
| !! | TGAATAAACCAAATAAAAGA+AGG | + | chr1_3:29108655-29108674 | None:intergenic | 20.0% |
| !! | ACAATATTCCAAAACTAAAT+TGG | + | chr1_3:29108930-29108949 | None:intergenic | 20.0% |
| !! | CTTAATGATTCTTTAAACAA+AGG | + | chr1_3:29109529-29109548 | None:intergenic | 20.0% |
| !! | AGAAATGTCTTAAATTTACA+AGG | + | chr1_3:29110033-29110052 | None:intergenic | 20.0% |
| !!! | ATTGAATTGTCTAGTAATTT+TGG | - | chr1_3:29110097-29110116 | Msa0113290:intron | 20.0% |
| !! | TAATTATTAAGTATTCCATG+TGG | - | chr1_3:29110291-29110310 | Msa0113290:intron | 20.0% |
| !!! | ATCAAAAGATTGTGTTTTAA+TGG | - | chr1_3:29110670-29110689 | Msa0113290:intron | 20.0% |
| !! | AAAATTAAATAGTGCTCATT+CGG | - | chr1_3:29111530-29111549 | Msa0113290:intron | 20.0% |
| !! | AAATAAAACTCAAGATATCA+TGG | + | chr1_3:29111791-29111810 | None:intergenic | 20.0% |
| !!! | CTCAAAATTTTCTTAATTTG+TGG | + | chr1_3:29111923-29111942 | None:intergenic | 20.0% |
| !!! | TTTTAGATCAAAATTGAATG+AGG | - | chr1_3:29111995-29112014 | Msa0113290:intron | 20.0% |
| !! | TTCAATTTAGTGTTTCTTAA+TGG | - | chr1_3:29112282-29112301 | Msa0113290:CDS | 20.0% |
| !!! | TTGGTTTTGAGATAATATTA+TGG | - | chr1_3:29112457-29112476 | Msa0113290:CDS | 20.0% |
| !! | ATCATATATAAGAATCCTAT+AGG | + | chr1_3:29112832-29112851 | None:intergenic | 20.0% |
| !! | CAAAGTTTGAATTGTTAAAA+AGG | - | chr1_3:29112915-29112934 | Msa0113290:intron | 20.0% |
| !! | TAAGGCAATAAACTTTATAA+AGG | + | chr1_3:29113175-29113194 | None:intergenic | 20.0% |
| !! | TTCAACAACAATAATCTATA+AGG | + | chr1_3:29113193-29113212 | None:intergenic | 20.0% |
| !!! | TATGTTCTATACTTTTGTTT+TGG | - | chr1_3:29113343-29113362 | Msa0113290:intron | 20.0% |
| !! | ATCTAAAGATAAATAGCATT+CGG | - | chr1_3:29113696-29113715 | Msa0113290:intron | 20.0% |
| !! | TATTAGCTATTTATCATTTG+TGG | - | chr1_3:29107783-29107802 | Msa0113290:intron | 20.0% |
| !! | ATTAGCTATTTATCATTTGT+GGG | - | chr1_3:29107784-29107803 | Msa0113290:intron | 20.0% |
| !! | AGTGATCAAATTAAGTAATA+AGG | - | chr1_3:29107819-29107838 | Msa0113290:intron | 20.0% |
| !!! | ATATTAAGAATTAGGGTATT+AGG | + | chr1_3:29108170-29108189 | None:intergenic | 20.0% |
| !! | ATCAAGGATATTAAGAATTA+GGG | + | chr1_3:29108177-29108196 | None:intergenic | 20.0% |
| !! | TATCAAGGATATTAAGAATT+AGG | + | chr1_3:29108178-29108197 | None:intergenic | 20.0% |
| !! | ATATTGAACATGATTATGAT+CGG | + | chr1_3:29108220-29108239 | None:intergenic | 20.0% |
| !! | AACAATAATAACAACAACAT+TGG | - | chr1_3:29114632-29114651 | Msa0113290:CDS | 20.0% |
| ! | ATAGAACTACCTAAAATAAG+GGG | + | chr1_3:29105612-29105631 | None:intergenic | 25.0% |
| ! | TAGTAAGAGTAATGATATGA+GGG | + | chr1_3:29105730-29105749 | None:intergenic | 25.0% |
| ! | ATAGTAAGAGTAATGATATG+AGG | + | chr1_3:29105731-29105750 | None:intergenic | 25.0% |
| ! | GTTGAGGTTATAAAACAAAT+TGG | - | chr1_3:29105816-29105835 | Msa0113290:intron | 25.0% |
| ! | TGGTACATGAAATTAATGAA+GGG | + | chr1_3:29106159-29106178 | None:intergenic | 25.0% |
| !!! | TGATTTAGTTTGTTCTCTTT+TGG | + | chr1_3:29106332-29106351 | None:intergenic | 25.0% |
| !! | GAAATTGTGAATTTTCTTTG+AGG | + | chr1_3:29106516-29106535 | None:intergenic | 25.0% |
| !! | CATAAAGTGATTTGATGATT+TGG | - | chr1_3:29106746-29106765 | Msa0113290:intron | 25.0% |
| !! | TAAAGTGATTTGATGATTTG+GGG | - | chr1_3:29106748-29106767 | Msa0113290:intron | 25.0% |
| ! | TCATGAATTAAACTTGACAT+TGG | - | chr1_3:29106801-29106820 | Msa0113290:intron | 25.0% |
| !! | CCTTAAATACACTTTTCTTA+TGG | + | chr1_3:29106937-29106956 | None:intergenic | 25.0% |
| !! | CCATAAGAAAAGTGTATTTA+AGG | - | chr1_3:29106934-29106953 | Msa0113290:intron | 25.0% |
| !! | AAGAAAAGTGTATTTAAGGA+AGG | - | chr1_3:29106938-29106957 | Msa0113290:intron | 25.0% |
| !! | AGAAAAGTGTATTTAAGGAA+GGG | - | chr1_3:29106939-29106958 | Msa0113290:intron | 25.0% |
| ! | ATTTGCCCACATAATATTAT+TGG | + | chr1_3:29107747-29107766 | None:intergenic | 25.0% |
| ! | ATTTGATCACTAATCAACTA+AGG | + | chr1_3:29107810-29107829 | None:intergenic | 25.0% |
| ! | AAGGCTATTAGATTTCTAAT+TGG | - | chr1_3:29107838-29107857 | Msa0113290:intron | 25.0% |
| ! | GCATATTTGTTTCATTCAAT+CGG | - | chr1_3:29108482-29108501 | Msa0113290:intron | 25.0% |
| !!! | CTACATGGTTTTATTTTTCT+TGG | - | chr1_3:29108593-29108612 | Msa0113290:intron | 25.0% |
| ! | GTATATGAGTTAGTTATTGA+TGG | - | chr1_3:29108624-29108643 | Msa0113290:intron | 25.0% |
| ! | AGCTTAATTGATTATCACTT+TGG | - | chr1_3:29108710-29108729 | Msa0113290:intron | 25.0% |
| ! | AAATTTGCATTAGGTATTCA+TGG | - | chr1_3:29108733-29108752 | Msa0113290:intron | 25.0% |
| ! | AATTTGCATTAGGTATTCAT+GGG | - | chr1_3:29108734-29108753 | Msa0113290:intron | 25.0% |
| ! | CATCATGAACTCATAAATTA+TGG | + | chr1_3:29108804-29108823 | None:intergenic | 25.0% |
| !!! | TTTTTTTCTTCTGGAAAAGA+AGG | - | chr1_3:29108850-29108869 | Msa0113290:intron | 25.0% |
| ! | AGATTTGATTCTTCTAACTT+TGG | - | chr1_3:29109404-29109423 | Msa0113290:intron | 25.0% |
| !! | TCTTCTAACTTTGGAAAATT+TGG | - | chr1_3:29109413-29109432 | Msa0113290:intron | 25.0% |
| !!! | AAGATTTGTTTTCCTTATGT+TGG | - | chr1_3:29109476-29109495 | Msa0113290:intron | 25.0% |
| ! | TTCCTTATGTTGGAAATAAT+TGG | - | chr1_3:29109486-29109505 | Msa0113290:intron | 25.0% |
| ! | AACCAATTATTTCCAACATA+AGG | + | chr1_3:29109491-29109510 | None:intergenic | 25.0% |
| !! | TTGGCTTGAAATTGAATATT+TGG | - | chr1_3:29109726-29109745 | Msa0113290:intron | 25.0% |
| ! | TGCTAAGAATTAACTTCAAA+CGG | + | chr1_3:29110389-29110408 | None:intergenic | 25.0% |
| !!! | GTCAAAAGATTGTGTTTTAA+TGG | - | chr1_3:29110409-29110428 | Msa0113290:intron | 25.0% |
| ! | AACTTGTGATGTTAAATATG+TGG | - | chr1_3:29110467-29110486 | Msa0113290:intron | 25.0% |
| ! | TCAATGCAATGATCAAATAT+TGG | + | chr1_3:29110362-29110381 | None:intergenic | 25.0% |
| ! | ACAATAATATCAATTGCTAG+TGG | + | chr1_3:29110869-29110888 | None:intergenic | 25.0% |
| ! | AAGAACATTGATATTGTTCT+TGG | - | chr1_3:29111032-29111051 | Msa0113290:intron | 25.0% |
| ! | ATATTTCCTTGCTTAAACTA+AGG | - | chr1_3:29111237-29111256 | Msa0113290:intron | 25.0% |
| ! | TATTTCCTTGCTTAAACTAA+GGG | - | chr1_3:29111238-29111257 | Msa0113290:intron | 25.0% |
| ! | GAAAATACCTCAAAAGATAA+GGG | - | chr1_3:29111552-29111571 | Msa0113290:CDS | 25.0% |
| ! | GATATATCTTTCAACATCAT+TGG | + | chr1_3:29111612-29111631 | None:intergenic | 25.0% |
| !! | TAGTAACGACAATCTAAAAT+AGG | + | chr1_3:29111684-29111703 | None:intergenic | 25.0% |
| ! | GTGACATTCTATATTGTTTA+AGG | - | chr1_3:29111872-29111891 | Msa0113290:intron | 25.0% |
| !!! | AATTTTCTTAATTTGTGGGA+CGG | + | chr1_3:29111918-29111937 | None:intergenic | 25.0% |
| ! | CAAATTTCTTAACTCATAAG+TGG | + | chr1_3:29112393-29112412 | None:intergenic | 25.0% |
| ! | CATAAAGCAATTATCTCATT+TGG | - | chr1_3:29112438-29112457 | Msa0113290:CDS | 25.0% |
| ! | GATAATATTATGGAGAATTG+TGG | - | chr1_3:29112467-29112486 | Msa0113290:CDS | 25.0% |
| !! | ATTCTTCTCAAGGTATTATT+CGG | - | chr1_3:29112658-29112677 | Msa0113290:intron | 25.0% |
| ! | GAATTCATATACTTCCTAAT+GGG | + | chr1_3:29112781-29112800 | None:intergenic | 25.0% |
| ! | TGAATTCATATACTTCCTAA+TGG | + | chr1_3:29112782-29112801 | None:intergenic | 25.0% |
| ! | TTATACGCATTTGAAAATAG+CGG | - | chr1_3:29112856-29112875 | Msa0113290:intron | 25.0% |
| ! | GTTCTCTTTAATAATCCTTA+TGG | + | chr1_3:29112944-29112963 | None:intergenic | 25.0% |
| ! | ACATTAGAAATCTGACAATT+TGG | - | chr1_3:29112980-29112999 | Msa0113290:intron | 25.0% |
| ! | ATGTCATTATATAACTTGAG+TGG | + | chr1_3:29113126-29113145 | None:intergenic | 25.0% |
| ! | ATTTGCCCACATAATATTAT+TGG | + | chr1_3:29107747-29107766 | None:intergenic | 25.0% |
| ! | ATTTGATCACTAATCAACTA+AGG | + | chr1_3:29107810-29107829 | None:intergenic | 25.0% |
| ! | AAGGCTATTAGATTTCTAAT+TGG | - | chr1_3:29107838-29107857 | Msa0113290:intron | 25.0% |
| !!! | AAACACAATCTTAACTTGTT+TGG | + | chr1_3:29114461-29114480 | None:intergenic | 25.0% |
| ! | AAACAAGTTAAGATTGTGTT+TGG | - | chr1_3:29114460-29114479 | Msa0113290:CDS | 25.0% |
| ! | TTCTTCAGGAAATTCTTTTG+TGG | - | chr1_3:29105036-29105055 | Msa0113290:CDS | 30.0% |
| ! | TCTTCAGGAAATTCTTTTGT+GGG | - | chr1_3:29105037-29105056 | Msa0113290:CDS | 30.0% |
| TTTGAGTCTATATAGGGATT+TGG | - | chr1_3:29105671-29105690 | Msa0113290:intron | 30.0% | |
| AATGATATGAGGGAATTTCT+TGG | + | chr1_3:29105720-29105739 | None:intergenic | 30.0% | |
| AAACATTCAAAACAGACGAT+AGG | - | chr1_3:29105878-29105897 | Msa0113290:intron | 30.0% | |
| AACATTCAAAACAGACGATA+GGG | - | chr1_3:29105879-29105898 | Msa0113290:intron | 30.0% | |
| GTGGTACATGAAATTAATGA+AGG | + | chr1_3:29106160-29106179 | None:intergenic | 30.0% | |
| ATGTATAGAGTTTCTCGAAT+TGG | - | chr1_3:29106180-29106199 | Msa0113290:intron | 30.0% | |
| CACAAAATCTTTCCTAAAGA+TGG | - | chr1_3:29106280-29106299 | Msa0113290:intron | 30.0% | |
| !!! | TTTAGTTTGTTCTCTTTTGG+AGG | + | chr1_3:29106329-29106348 | None:intergenic | 30.0% |
| TGGAAAAAAGTGAGATTTGT+TGG | + | chr1_3:29106461-29106480 | None:intergenic | 30.0% | |
| !! | GAATTTTCTTTGAGGACTTA+TGG | + | chr1_3:29106508-29106527 | None:intergenic | 30.0% |
| ! | AATGTTAAAGAGTACGCTTA+GGG | + | chr1_3:29106696-29106715 | None:intergenic | 30.0% |
| ! | AAATGTTAAAGAGTACGCTT+AGG | + | chr1_3:29106697-29106716 | None:intergenic | 30.0% |
| GTCAAGTTTAATTCATGACT+TGG | + | chr1_3:29106799-29106818 | None:intergenic | 30.0% | |
| TTTCCCATTATTCCGTTAAT+GGG | + | chr1_3:29107922-29107941 | None:intergenic | 30.0% | |
| TTTATATTGGATGGCCATTA+GGG | + | chr1_3:29107945-29107964 | None:intergenic | 30.0% | |
| ! | TTTTATATTGGATGGCCATT+AGG | + | chr1_3:29107946-29107965 | None:intergenic | 30.0% |
| ! | ATAGCCTCTTTTATATTGGA+TGG | + | chr1_3:29107954-29107973 | None:intergenic | 30.0% |
| ATCCAATATAAAAGAGGCTA+TGG | - | chr1_3:29107953-29107972 | Msa0113290:intron | 30.0% | |
| AACAAACATCAACATCAACA+CGG | + | chr1_3:29108082-29108101 | None:intergenic | 30.0% | |
| ! | ACGACATGTTTGATTTATCA+AGG | + | chr1_3:29108193-29108212 | None:intergenic | 30.0% |
| CAACGATTATGAATCAATAG+CGG | + | chr1_3:29108254-29108273 | None:intergenic | 30.0% | |
| TGATTCATAATCGTTGAACA+TGG | - | chr1_3:29108258-29108277 | Msa0113290:intron | 30.0% | |
| ! | ATACCACTTGTTGGAAATTT+AGG | + | chr1_3:29108309-29108328 | None:intergenic | 30.0% |
| GTCTTCATGTTTGATCTATT+GGG | - | chr1_3:29108336-29108355 | Msa0113290:intron | 30.0% | |
| GCATCAATAAACAATTAGAG+AGG | + | chr1_3:29108464-29108483 | None:intergenic | 30.0% | |
| !! | ATTTTGACCTGTCATTCAAT+CGG | - | chr1_3:29108511-29108530 | Msa0113290:intron | 30.0% |
| !! | TTTGCTTTAATTTGTACCGA+TGG | - | chr1_3:29108567-29108586 | Msa0113290:intron | 30.0% |
| GTGATAATCAATTAAGCTCT+CGG | + | chr1_3:29108708-29108727 | None:intergenic | 30.0% | |
| ! | TCACTTTGGAAATTTGCATT+AGG | - | chr1_3:29108724-29108743 | Msa0113290:intron | 30.0% |
| AATCATGCACACATCAATAA+CGG | + | chr1_3:29109098-29109117 | None:intergenic | 30.0% | |
| CATCAAACAAAGCTCTATAT+TGG | + | chr1_3:29109125-29109144 | None:intergenic | 30.0% | |
| ! | GCAAAGTTTCGATTTTTACT+TGG | - | chr1_3:29109707-29109726 | Msa0113290:intron | 30.0% |
| !! | GGAATGGTCTTAATTTTACA+AGG | + | chr1_3:29110062-29110081 | None:intergenic | 30.0% |
| !!! | TCTAGTAATTTTGGTTGAGT+TGG | - | chr1_3:29110106-29110125 | Msa0113290:intron | 30.0% |
| ATCGCAGGTATGTAATTATT+CGG | + | chr1_3:29110258-29110277 | None:intergenic | 30.0% | |
| ATCAAATATGGTAACAAGTC+CGG | + | chr1_3:29110351-29110370 | None:intergenic | 30.0% | |
| CTCAATGCAATGATCAAATA+TGG | + | chr1_3:29110363-29110382 | None:intergenic | 30.0% | |
| !!! | ATTGTGTTTTAATGGTGCTT+TGG | - | chr1_3:29110417-29110436 | Msa0113290:intron | 30.0% |
| ! | AATTTTTCATGTGGGTAATG+AGG | - | chr1_3:29110499-29110518 | Msa0113290:intron | 30.0% |
| ! | TAAGAGTCTTGTCAGATAAT+GGG | + | chr1_3:29110538-29110557 | None:intergenic | 30.0% |
| ! | TTAAGAGTCTTGTCAGATAA+TGG | + | chr1_3:29110539-29110558 | None:intergenic | 30.0% |
| ! | ACTCTTAAGTTTTTCCATGT+GGG | - | chr1_3:29110551-29110570 | Msa0113290:intron | 30.0% |
| AATAAGTCCTGTCAGATAAT+GGG | + | chr1_3:29110598-29110617 | None:intergenic | 30.0% | |
| TAATAAGTCCTGTCAGATAA+TGG | + | chr1_3:29110599-29110618 | None:intergenic | 30.0% | |
| TGCTAAGAATTAATTGCAAG+CGG | + | chr1_3:29110650-29110669 | None:intergenic | 30.0% | |
| ATTTCCTTGCTTAAACTAAG+GGG | - | chr1_3:29111239-29111258 | Msa0113290:intron | 30.0% | |
| ACACTATAATTTCGACTATC+AGG | - | chr1_3:29111377-29111396 | Msa0113290:intron | 30.0% | |
| GGAAAATACCTCAAAAGATA+AGG | - | chr1_3:29111551-29111570 | Msa0113290:CDS | 30.0% | |
| ! | TTATTTGCCCTTATCTTTTG+AGG | + | chr1_3:29111562-29111581 | None:intergenic | 30.0% |
| AGATAAGGGCAAATAAAGAA+AGG | - | chr1_3:29111566-29111585 | Msa0113290:CDS | 30.0% | |
| TTTCTTGAGGATATTGAGTT+TGG | - | chr1_3:29111959-29111978 | Msa0113290:intron | 30.0% | |
| TTCTTGAGGATATTGAGTTT+GGG | - | chr1_3:29111960-29111979 | Msa0113290:intron | 30.0% | |
| ATAACAATAATGTCCTCATG+AGG | + | chr1_3:29112076-29112095 | None:intergenic | 30.0% | |
| ! | AGTTTCTTAACTTGATTGAG+AGG | + | chr1_3:29112100-29112119 | None:intergenic | 30.0% |
| !! | ATGTTTGTTATGTGAAACCA+AGG | - | chr1_3:29112561-29112580 | Msa0113290:CDS | 30.0% |
| !! | ACTTTTGTTTGAGATTTCCT+TGG | + | chr1_3:29112581-29112600 | None:intergenic | 30.0% |
| AAGTTAGTGATGAAAGATCT+TGG | - | chr1_3:29112597-29112616 | Msa0113290:intron | 30.0% | |
| AGTTAGTGATGAAAGATCTT+GGG | - | chr1_3:29112598-29112617 | Msa0113290:intron | 30.0% | |
| ATACTTAGAGATTCTTCTCA+AGG | - | chr1_3:29112648-29112667 | Msa0113290:intron | 30.0% | |
| GCGGATATAATAAGATTGTT+TGG | - | chr1_3:29112875-29112894 | Msa0113290:intron | 30.0% | |
| TTGTTAAAAAGGCAACCATA+AGG | - | chr1_3:29112926-29112945 | Msa0113290:intron | 30.0% | |
| TATAATACACATCCTGATTC+AGG | - | chr1_3:29113044-29113063 | Msa0113290:intron | 30.0% | |
| TTACAGTAATTTCCTGAATC+AGG | + | chr1_3:29113059-29113078 | None:intergenic | 30.0% | |
| CTGTAAGTATTTATGTCACT+TGG | - | chr1_3:29113073-29113092 | Msa0113290:intron | 30.0% | |
| ACTTGGTTGCATATTGTTAA+AGG | - | chr1_3:29113090-29113109 | Msa0113290:intron | 30.0% | |
| TCATATGGTTGTTGTCATTA+AGG | - | chr1_3:29113288-29113307 | Msa0113290:intron | 30.0% | |
| TGCACAAAATGATACAGTAA+TGG | + | chr1_3:29113436-29113455 | None:intergenic | 30.0% | |
| ! | ATCTCACTAAAGTTTTCAGT+TGG | - | chr1_3:29113483-29113502 | Msa0113290:intron | 30.0% |
| ! | AAGTTTTCAGTTGGATCATT+TGG | - | chr1_3:29113492-29113511 | Msa0113290:intron | 30.0% |
| ! | CTTGATGACATAGATTGATA+TGG | + | chr1_3:29113569-29113588 | None:intergenic | 30.0% |
| CCACCTCATACATTAATAAT+GGG | + | chr1_3:29113657-29113676 | None:intergenic | 30.0% | |
| TCCACCTCATACATTAATAA+TGG | + | chr1_3:29113658-29113677 | None:intergenic | 30.0% | |
| TAGATTTCAACCTTACAATC+TGG | + | chr1_3:29113681-29113700 | None:intergenic | 30.0% | |
| TTTCCCATTATTCCGTTAAT+GGG | + | chr1_3:29107922-29107941 | None:intergenic | 30.0% | |
| TTTATATTGGATGGCCATTA+GGG | + | chr1_3:29107945-29107964 | None:intergenic | 30.0% | |
| ! | TTTTATATTGGATGGCCATT+AGG | + | chr1_3:29107946-29107965 | None:intergenic | 30.0% |
| ! | ATAGCCTCTTTTATATTGGA+TGG | + | chr1_3:29107954-29107973 | None:intergenic | 30.0% |
| ATCCAATATAAAAGAGGCTA+TGG | - | chr1_3:29107953-29107972 | Msa0113290:intron | 30.0% | |
| AACAAACATCAACATCAACA+CGG | + | chr1_3:29108082-29108101 | None:intergenic | 30.0% | |
| ! | ACGACATGTTTGATTTATCA+AGG | + | chr1_3:29108193-29108212 | None:intergenic | 30.0% |
| CAACGATTATGAATCAATAG+CGG | + | chr1_3:29108254-29108273 | None:intergenic | 30.0% | |
| TGATTCATAATCGTTGAACA+TGG | - | chr1_3:29108258-29108277 | Msa0113290:intron | 30.0% | |
| TAAGTATATCCAAAGGTTGT+TGG | + | chr1_3:29114379-29114398 | None:intergenic | 30.0% | |
| !! | TTAACTTGTTTGGTTCAATG+TGG | + | chr1_3:29114451-29114470 | None:intergenic | 30.0% |
| CTAATCTTGAATCCAAATTC+AGG | + | chr1_3:29114661-29114680 | None:intergenic | 30.0% | |
| AGATCTTAGAGTCTCTTCAA+GGG | + | chr1_3:29104899-29104918 | None:intergenic | 35.0% | |
| !!! | ATGGTTTTTGGAATGTGGAA+AGG | - | chr1_3:29105518-29105537 | Msa0113290:CDS | 35.0% |
| !!! | TGGTTTTTGGAATGTGGAAA+GGG | - | chr1_3:29105519-29105538 | Msa0113290:CDS | 35.0% |
| AACAAGTTCTCACTCTTACT+TGG | - | chr1_3:29105780-29105799 | Msa0113290:intron | 35.0% | |
| ACAAGTTCTCACTCTTACTT+GGG | - | chr1_3:29105781-29105800 | Msa0113290:intron | 35.0% | |
| ACATTCAAAACAGACGATAG+GGG | - | chr1_3:29105880-29105899 | Msa0113290:intron | 35.0% | |
| !! | GGGTCTGTTTGAAATAGTTT+TGG | - | chr1_3:29105900-29105919 | Msa0113290:intron | 35.0% |
| TTCGAGAAACTCTATACATG+TGG | + | chr1_3:29106179-29106198 | None:intergenic | 35.0% | |
| ! | GATTTTGTGTGCTTCATTTG+CGG | + | chr1_3:29106269-29106288 | None:intergenic | 35.0% |
| !! | TCACTTTCCTCATTTGGTTT+TGG | - | chr1_3:29106303-29106322 | Msa0113290:intron | 35.0% |
| AGGGAGAGAAAAAATGTTGA+GGG | + | chr1_3:29106414-29106433 | None:intergenic | 35.0% | |
| AAGGGAGAGAAAAAATGTTG+AGG | + | chr1_3:29106415-29106434 | None:intergenic | 35.0% | |
| !! | TTTTGATAGCACTGGGTTTA+TGG | + | chr1_3:29106481-29106500 | None:intergenic | 35.0% |
| !! | TGGCAAATTTTGATAGCACT+GGG | + | chr1_3:29106488-29106507 | None:intergenic | 35.0% |
| !! | ATGGCAAATTTTGATAGCAC+TGG | + | chr1_3:29106489-29106508 | None:intergenic | 35.0% |
| TTTCATCACATCGTCTATTG+AGG | + | chr1_3:29107157-29107176 | None:intergenic | 35.0% | |
| TCTAAACCTTGATGAAGCAT+TGG | - | chr1_3:29107485-29107504 | Msa0113290:intron | 35.0% | |
| GTTTCCCATTATTCCGTTAA+TGG | + | chr1_3:29107923-29107942 | None:intergenic | 35.0% | |
| ATGGCCATCCAATATAAAAG+AGG | - | chr1_3:29107947-29107966 | Msa0113290:intron | 35.0% | |
| ! | GACCATAGCCTCTTTTATAT+TGG | + | chr1_3:29107958-29107977 | None:intergenic | 35.0% |
| ! | ATTAGGGTATTAGGAATACC+TGG | + | chr1_3:29108161-29108180 | None:intergenic | 35.0% |
| AGACCTAAATTTCCAACAAG+TGG | - | chr1_3:29108303-29108322 | Msa0113290:intron | 35.0% | |
| GGTCTTCATGTTTGATCTAT+TGG | - | chr1_3:29108335-29108354 | Msa0113290:intron | 35.0% | |
| TAAAACCATGTAGTGACCAT+CGG | + | chr1_3:29108586-29108605 | None:intergenic | 35.0% | |
| CGGTCAAAATTATTGTGCTT+TGG | + | chr1_3:29108688-29108707 | None:intergenic | 35.0% | |
| !!! | GGCTGTAGGCATTTTTTTTA+TGG | - | chr1_3:29108755-29108774 | Msa0113290:intron | 35.0% |
| ! | ATAAAGCTCCCTTTGTTATC+CGG | - | chr1_3:29109004-29109023 | Msa0113290:intron | 35.0% |
| ACATATCACCGGATAACAAA+GGG | + | chr1_3:29109015-29109034 | None:intergenic | 35.0% | |
| TGCATGAAATCACATATCAC+CGG | + | chr1_3:29109026-29109045 | None:intergenic | 35.0% | |
| ATGCATTGTCATACACACAT+TGG | - | chr1_3:29109878-29109897 | Msa0113290:intron | 35.0% | |
| ! | TACACACATTGGTGTGATTT+TGG | - | chr1_3:29109889-29109908 | Msa0113290:intron | 35.0% |
| ! | ACACACATTGGTGTGATTTT+GGG | - | chr1_3:29109890-29109909 | Msa0113290:intron | 35.0% |
| TATGTCGCTAAATGACCATA+AGG | + | chr1_3:29109976-29109995 | None:intergenic | 35.0% | |
| AGCGACATAATGAACTAATG+CGG | - | chr1_3:29109987-29110006 | Msa0113290:intron | 35.0% | |
| GAATAATTACATACCTGCGA+TGG | - | chr1_3:29110257-29110276 | Msa0113290:intron | 35.0% | |
| AGTATTCCATGTGGATAATG+AGG | - | chr1_3:29110300-29110319 | Msa0113290:intron | 35.0% | |
| TGGATAATGAGGATGTCAAA+AGG | - | chr1_3:29110311-29110330 | Msa0113290:intron | 35.0% | |
| !!! | GTGCTTTGGTATCTTGTTTT+GGG | - | chr1_3:29110431-29110450 | Msa0113290:intron | 35.0% |
| ! | GACTCTTAAGTTTTTCCATG+TGG | - | chr1_3:29110550-29110569 | Msa0113290:intron | 35.0% |
| TGACATGTTTACACTTGTGA+TGG | - | chr1_3:29110769-29110788 | Msa0113290:intron | 35.0% | |
| !! | CTTGATATTGATGATGCACT+AGG | - | chr1_3:29110896-29110915 | Msa0113290:intron | 35.0% |
| ATCAAGACCTTAGATAAGCA+TGG | - | chr1_3:29111055-29111074 | Msa0113290:intron | 35.0% | |
| AGTTTCACCATGCTTATCTA+AGG | + | chr1_3:29111065-29111084 | None:intergenic | 35.0% | |
| CCAAACTTGATTCTCACATT+AGG | + | chr1_3:29111111-29111130 | None:intergenic | 35.0% | |
| CCTAATGTGAGAATCAAGTT+TGG | - | chr1_3:29111108-29111127 | Msa0113290:intron | 35.0% | |
| GAGTATACACCAAATTCCAT+AGG | - | chr1_3:29111136-29111155 | Msa0113290:intron | 35.0% | |
| !! | TTTAGCTTTATGATCACACG+TGG | + | chr1_3:29111162-29111181 | None:intergenic | 35.0% |
| AGAGAAAAACAAGCTCTCAT+TGG | - | chr1_3:29111277-29111296 | Msa0113290:intron | 35.0% | |
| TCTTGAGGATATTGAGTTTG+GGG | - | chr1_3:29111961-29111980 | Msa0113290:intron | 35.0% | |
| AGTATATTTGGATCCTCATG+AGG | - | chr1_3:29112060-29112079 | Msa0113290:CDS | 35.0% | |
| GTTAGTGATGAAAGATCTTG+GGG | - | chr1_3:29112599-29112618 | Msa0113290:intron | 35.0% | |
| TGAAATGCCTAACACAAAAG+AGG | + | chr1_3:29112628-29112647 | None:intergenic | 35.0% | |
| AGTCTCAAATATTGCCCATT+AGG | - | chr1_3:29112764-29112783 | Msa0113290:intron | 35.0% | |
| ! | TTTTCCTAAGCTTTGCCTAT+AGG | - | chr1_3:29112814-29112833 | Msa0113290:intron | 35.0% |
| ATCATTAGTATGTCAGACTC+TGG | - | chr1_3:29113005-29113024 | Msa0113290:intron | 35.0% | |
| AATCAAAGACATGACACCTA+AGG | - | chr1_3:29113260-29113279 | Msa0113290:intron | 35.0% | |
| ! | ACACCTAAGGTCTTTTCATA+TGG | - | chr1_3:29113273-29113292 | Msa0113290:intron | 35.0% |
| CAACCATATGAAAAGACCTT+AGG | + | chr1_3:29113279-29113298 | None:intergenic | 35.0% | |
| TGTTGTCATTAAGGATGTCT+TGG | - | chr1_3:29113297-29113316 | Msa0113290:intron | 35.0% | |
| ! | TTAAGGATGTCTTGGATTAG+TGG | - | chr1_3:29113305-29113324 | Msa0113290:intron | 35.0% |
| !! | TAAGGATGTCTTGGATTAGT+GGG | - | chr1_3:29113306-29113325 | Msa0113290:intron | 35.0% |
| CAGTTGGATCATTTGGAAAT+AGG | - | chr1_3:29113499-29113518 | Msa0113290:intron | 35.0% | |
| CATAGATTGATATGGATGAG+TGG | + | chr1_3:29113561-29113580 | None:intergenic | 35.0% | |
| ! | TGTCATCAAGTGCATTGATA+TGG | - | chr1_3:29113579-29113598 | Msa0113290:intron | 35.0% |
| GTCACTGACATATAACGTAA+CGG | + | chr1_3:29113619-29113638 | None:intergenic | 35.0% | |
| GGTCCCATTATTAATGTATG+AGG | - | chr1_3:29113651-29113670 | Msa0113290:intron | 35.0% | |
| CCCATTATTAATGTATGAGG+TGG | - | chr1_3:29113654-29113673 | Msa0113290:intron | 35.0% | |
| ATTAAGATATGTAGCCCAAG+TGG | - | chr1_3:29113748-29113767 | Msa0113290:intron | 35.0% | |
| TTAAGATATGTAGCCCAAGT+GGG | - | chr1_3:29113749-29113768 | Msa0113290:intron | 35.0% | |
| GTTTCCCATTATTCCGTTAA+TGG | + | chr1_3:29107923-29107942 | None:intergenic | 35.0% | |
| ATGGCCATCCAATATAAAAG+AGG | - | chr1_3:29107947-29107966 | Msa0113290:intron | 35.0% | |
| ! | GACCATAGCCTCTTTTATAT+TGG | + | chr1_3:29107958-29107977 | None:intergenic | 35.0% |
| ! | ATTAGGGTATTAGGAATACC+TGG | + | chr1_3:29108161-29108180 | None:intergenic | 35.0% |
| CCAAAGGTTGTTGGAAATTT+AGG | + | chr1_3:29114370-29114389 | None:intergenic | 35.0% | |
| CCTAAATTTCCAACAACCTT+TGG | - | chr1_3:29114367-29114386 | Msa0113290:CDS | 35.0% | |
| !! | AGGGTTCTAAGTATATCCAA+AGG | + | chr1_3:29114386-29114405 | None:intergenic | 35.0% |
| GAAGAGAAAATCAGAGGTTA+GGG | + | chr1_3:29114405-29114424 | None:intergenic | 35.0% | |
| TGAAGAGAAAATCAGAGGTT+AGG | + | chr1_3:29114406-29114425 | None:intergenic | 35.0% | |
| ! | ACCTCTGATTTTCTCTTCAA+AGG | - | chr1_3:29114407-29114426 | Msa0113290:CDS | 35.0% |
| ! | ACCTTTGAAGAGAAAATCAG+AGG | + | chr1_3:29114411-29114430 | None:intergenic | 35.0% |
| TATGATCTTCACTCATTGGA+GGG | + | chr1_3:29114589-29114608 | None:intergenic | 35.0% | |
| ! | CAACATTGGTAACCTGAATT+TGG | - | chr1_3:29114646-29114665 | Msa0113290:CDS | 35.0% |
| GAGAGTGATGATACATTGTT+GGG | + | chr1_3:29114790-29114809 | None:intergenic | 35.0% | |
| TGAGAGTGATGATACATTGT+TGG | + | chr1_3:29114791-29114810 | None:intergenic | 35.0% | |
| GAGATCTTAGAGTCTCTTCA+AGG | + | chr1_3:29104900-29104919 | None:intergenic | 40.0% | |
| TACCTGAATCTCCTCATCAA+CGG | - | chr1_3:29104931-29104950 | Msa0113290:CDS | 40.0% | |
| ! | TTTCCAAGTTGAAGGTCGTT+TGG | - | chr1_3:29104975-29104994 | Msa0113290:CDS | 40.0% |
| ! | TTCAACGCCAAAGTATCTAG+CGG | + | chr1_3:29105313-29105332 | None:intergenic | 40.0% |
| ! | GTGACCAGTCATATGTTTTC+TGG | - | chr1_3:29105473-29105492 | Msa0113290:intron | 40.0% |
| CTTGCCAGAAAACATATGAC+TGG | + | chr1_3:29105480-29105499 | None:intergenic | 40.0% | |
| !! | GTCATATGTTTTCTGGCAAG+CGG | - | chr1_3:29105480-29105499 | Msa0113290:intron | 40.0% |
| !! | AAGGGAAAGGGTATGGTTTT+TGG | - | chr1_3:29105506-29105525 | Msa0113290:CDS | 40.0% |
| !!! | AGGGTATGGTTTTTGGAATG+TGG | - | chr1_3:29105513-29105532 | Msa0113290:CDS | 40.0% |
| !!! | GGTTTTTGGAATGTGGAAAG+GGG | - | chr1_3:29105520-29105539 | Msa0113290:CDS | 40.0% |
| !!! | GGGTTTGTTCCCCTTATTTT+AGG | - | chr1_3:29105600-29105619 | Msa0113290:intron | 40.0% |
| TCATTTGCGGAAGACAAGAT+TGG | + | chr1_3:29106256-29106275 | None:intergenic | 40.0% | |
| TGAGGAAAGTGACCATCTTT+AGG | + | chr1_3:29106295-29106314 | None:intergenic | 40.0% | |
| ! | AGATGGTCACTTTCCTCATT+TGG | - | chr1_3:29106297-29106316 | Msa0113290:intron | 40.0% |
| GGGAGAGAAAAAATGTTGAG+GGG | + | chr1_3:29106413-29106432 | None:intergenic | 40.0% | |
| ! | AGTGATTTGATGATTTGGGG+AGG | - | chr1_3:29106751-29106770 | Msa0113290:intron | 40.0% |
| ! | ATGATTTGGGGAGGAACATA+GGG | - | chr1_3:29106760-29106779 | Msa0113290:intron | 40.0% |
| GAACATGTTGTCCAAAGTTG+GGG | + | chr1_3:29107210-29107229 | None:intergenic | 40.0% | |
| GGAACATGTTGTCCAAAGTT+GGG | + | chr1_3:29107211-29107230 | None:intergenic | 40.0% | |
| ! | TAGACGAAGGTCTTCGATTT+TGG | + | chr1_3:29107301-29107320 | None:intergenic | 40.0% |
| ! | CTAAGGAGGATTTTAGACGA+AGG | + | chr1_3:29107314-29107333 | None:intergenic | 40.0% |
| TGTCGAACTAGTCAAACTCA+TGG | - | chr1_3:29107449-29107468 | Msa0113290:intron | 40.0% | |
| ACTAGTCAAACTCATGGTCA+TGG | - | chr1_3:29107455-29107474 | Msa0113290:intron | 40.0% | |
| CTAGTCAAACTCATGGTCAT+GGG | - | chr1_3:29107456-29107475 | Msa0113290:intron | 40.0% | |
| GTAATGCCAATGCTTCATCA+AGG | + | chr1_3:29107494-29107513 | None:intergenic | 40.0% | |
| GTTGATATGGACTCAATGAG+TGG | - | chr1_3:29107884-29107903 | Msa0113290:intron | 40.0% | |
| ATGGCCCATTAACGGAATAA+TGG | - | chr1_3:29107915-29107934 | Msa0113290:intron | 40.0% | |
| TGGCCCATTAACGGAATAAT+GGG | - | chr1_3:29107916-29107935 | Msa0113290:intron | 40.0% | |
| ! | GGAATAATGGGAAACCCTAA+TGG | - | chr1_3:29107928-29107947 | Msa0113290:intron | 40.0% |
| TTTGCCGTGTACGGTATATT+GGG | + | chr1_3:29107981-29108000 | None:intergenic | 40.0% | |
| GAAGAGAACTTGAGGCATAA+AGG | - | chr1_3:29108020-29108039 | Msa0113290:intron | 40.0% | |
| ! | AACTTGAGGCATAAAGGTAC+CGG | - | chr1_3:29108026-29108045 | Msa0113290:intron | 40.0% |
| !! | TGATTTGGTTCTTCCTCAAC+CGG | + | chr1_3:29108048-29108067 | None:intergenic | 40.0% |
| ATCAACATCAACACGGTTAG+CGG | + | chr1_3:29108075-29108094 | None:intergenic | 40.0% | |
| ! | GCTACATGAAAGCTTTATCC+AGG | - | chr1_3:29108140-29108159 | Msa0113290:intron | 40.0% |
| CGATAAACCGATTGAATGAC+AGG | + | chr1_3:29108521-29108540 | None:intergenic | 40.0% | |
| ! | TGGCTGCACCTTCTTTTATT+TGG | - | chr1_3:29108644-29108663 | Msa0113290:intron | 40.0% |
| ! | ATTAGGTATTCATGGGCTGT+AGG | - | chr1_3:29108741-29108760 | Msa0113290:intron | 40.0% |
| CACATATCACCGGATAACAA+AGG | + | chr1_3:29109016-29109035 | None:intergenic | 40.0% | |
| TAATGCGGCCTACATTAAGT+CGG | - | chr1_3:29110002-29110021 | Msa0113290:intron | 40.0% | |
| GAATCAAATCTACGCAACAG+AGG | + | chr1_3:29110157-29110176 | None:intergenic | 40.0% | |
| !!! | TTCATGCGAGCTGTTTTAGT+CGG | - | chr1_3:29110210-29110229 | Msa0113290:intron | 40.0% |
| TACCTGCGATGGTAAATATG+CGG | - | chr1_3:29110268-29110287 | Msa0113290:intron | 40.0% | |
| TGACATCCTCATTATCCACA+TGG | + | chr1_3:29110309-29110328 | None:intergenic | 40.0% | |
| AACAAGTCCGGTCAGATAAT+GGG | + | chr1_3:29110339-29110358 | None:intergenic | 40.0% | |
| TAACAAGTCCGGTCAGATAA+TGG | + | chr1_3:29110340-29110359 | None:intergenic | 40.0% | |
| !! | GGTGCTTTGGTATCTTGTTT+TGG | - | chr1_3:29110430-29110449 | Msa0113290:intron | 40.0% |
| ! | GTTTTTCCATGTGGGTAATG+AGG | - | chr1_3:29110559-29110578 | Msa0113290:intron | 40.0% |
| TGGGTAATGAGGATGTCAAA+AGG | - | chr1_3:29110510-29110529 | Msa0113290:intron | 40.0% | |
| !!! | TTGTGTTTTAATGGTGCGCT+TGG | - | chr1_3:29110679-29110698 | Msa0113290:intron | 40.0% |
| AAAGCCCCTTAGTTTAAGCA+AGG | + | chr1_3:29111246-29111265 | None:intergenic | 40.0% | |
| CTTGAGGATATTGAGTTTGG+GGG | - | chr1_3:29111962-29111981 | Msa0113290:intron | 40.0% | |
| ! | CTAGAATCCCTAGTTCTTGA+GGG | + | chr1_3:29112147-29112166 | None:intergenic | 40.0% |
| ! | ACTAGAATCCCTAGTTCTTG+AGG | + | chr1_3:29112148-29112167 | None:intergenic | 40.0% |
| !!! | AATTTTGGAGCTGCACAAGA+TGG | - | chr1_3:29112257-29112276 | Msa0113290:CDS | 40.0% |
| TGTGGATTTAGCAAGTTCAG+TGG | - | chr1_3:29112485-29112504 | Msa0113290:CDS | 40.0% | |
| GTGGATTTAGCAAGTTCAGT+GGG | - | chr1_3:29112486-29112505 | Msa0113290:CDS | 40.0% | |
| TGAGACTGAAAAGTCTCTCT+CGG | + | chr1_3:29112751-29112770 | None:intergenic | 40.0% | |
| GAATCCTATAGGCAAAGCTT+AGG | + | chr1_3:29112821-29112840 | None:intergenic | 40.0% | |
| ! | GGTGTCATGTCTTTGATTAG+TGG | + | chr1_3:29113258-29113277 | None:intergenic | 40.0% |
| CTGCAGAAGTAAAGTTCATG+AGG | - | chr1_3:29113395-29113414 | Msa0113290:intron | 40.0% | |
| ATTGATATGGATGAGTGGCA+TGG | + | chr1_3:29113556-29113575 | None:intergenic | 40.0% | |
| ! | CATCAAGTGCATTGATATGG+TGG | - | chr1_3:29113582-29113601 | Msa0113290:intron | 40.0% |
| ATTCCAACAATCTCCCACTT+GGG | + | chr1_3:29113765-29113784 | None:intergenic | 40.0% | |
| TATTCCAACAATCTCCCACT+TGG | + | chr1_3:29113766-29113785 | None:intergenic | 40.0% | |
| GTTGATATGGACTCAATGAG+TGG | - | chr1_3:29107884-29107903 | Msa0113290:intron | 40.0% | |
| ATGGCCCATTAACGGAATAA+TGG | - | chr1_3:29107915-29107934 | Msa0113290:intron | 40.0% | |
| TGGCCCATTAACGGAATAAT+GGG | - | chr1_3:29107916-29107935 | Msa0113290:intron | 40.0% | |
| ! | GGAATAATGGGAAACCCTAA+TGG | - | chr1_3:29107928-29107947 | Msa0113290:intron | 40.0% |
| TTTGCCGTGTACGGTATATT+GGG | + | chr1_3:29107981-29108000 | None:intergenic | 40.0% | |
| GAAGAGAACTTGAGGCATAA+AGG | - | chr1_3:29108020-29108039 | Msa0113290:intron | 40.0% | |
| ! | AACTTGAGGCATAAAGGTAC+CGG | - | chr1_3:29108026-29108045 | Msa0113290:intron | 40.0% |
| !! | TGATTTGGTTCTTCCTCAAC+CGG | + | chr1_3:29108048-29108067 | None:intergenic | 40.0% |
| ATCAACATCAACACGGTTAG+CGG | + | chr1_3:29108075-29108094 | None:intergenic | 40.0% | |
| ! | GCTACATGAAAGCTTTATCC+AGG | - | chr1_3:29108140-29108159 | Msa0113290:intron | 40.0% |
| GGTTCAATGTGGTTTAATCC+AGG | + | chr1_3:29114440-29114459 | None:intergenic | 40.0% | |
| TCACTCATTGGAGGGTAAAT+TGG | + | chr1_3:29114581-29114600 | None:intergenic | 40.0% | |
| CTATGATCTTCACTCATTGG+AGG | + | chr1_3:29114590-29114609 | None:intergenic | 40.0% | |
| CTGCTATGATCTTCACTCAT+TGG | + | chr1_3:29114593-29114612 | None:intergenic | 40.0% | |
| AGATTAGTGTACCTCAACCT+TGG | - | chr1_3:29114674-29114693 | Msa0113290:CDS | 40.0% | |
| GAGGAGATTCAGGTAGTCAA+GGG | + | chr1_3:29104926-29104945 | None:intergenic | 45.0% | |
| TGAGGAGATTCAGGTAGTCA+AGG | + | chr1_3:29104927-29104946 | None:intergenic | 45.0% | |
| ! | GACGTCACTTTCCAAGTTGA+AGG | - | chr1_3:29104967-29104986 | Msa0113290:CDS | 45.0% |
| GAACCAAACGACCTTCAACT+TGG | + | chr1_3:29104981-29105000 | None:intergenic | 45.0% | |
| ! | CAGCAAGGAGTCTTTTCTTC+AGG | - | chr1_3:29105022-29105041 | Msa0113290:CDS | 45.0% |
| ! | CAGGAAATTCTTTTGTGGGC+CGG | - | chr1_3:29105041-29105060 | Msa0113290:CDS | 45.0% |
| TGTACAGAAACTGCAACAGG+AGG | + | chr1_3:29105173-29105192 | None:intergenic | 45.0% | |
| CACTGTACAGAAACTGCAAC+AGG | + | chr1_3:29105176-29105195 | None:intergenic | 45.0% | |
| CTGTTGCAGTTTCTGTACAG+TGG | - | chr1_3:29105174-29105193 | Msa0113290:CDS | 45.0% | |
| CATGAGCCTAGACCTAATTG+TGG | - | chr1_3:29105222-29105241 | Msa0113290:CDS | 45.0% | |
| CTCTCACCACAATTAGGTCT+AGG | + | chr1_3:29105231-29105250 | None:intergenic | 45.0% | |
| AGACCTAATTGTGGTGAGAG+AGG | - | chr1_3:29105231-29105250 | Msa0113290:CDS | 45.0% | |
| GACCTAATTGTGGTGAGAGA+GGG | - | chr1_3:29105232-29105251 | Msa0113290:CDS | 45.0% | |
| GGTATCAAGGGCAAGATCAA+CGG | + | chr1_3:29105283-29105302 | None:intergenic | 45.0% | |
| ! | AAAGTATCTAGCGGCAGCTA+GGG | + | chr1_3:29105304-29105323 | None:intergenic | 45.0% |
| !! | ATATGTTTTCTGGCAAGCGG+AGG | - | chr1_3:29105483-29105502 | Msa0113290:intron | 45.0% |
| GAGGGAATTTCTTGGAAGAG+AGG | + | chr1_3:29105712-29105731 | None:intergenic | 45.0% | |
| ! | TGGGATTGAGACTTGAGTTG+AGG | - | chr1_3:29105800-29105819 | Msa0113290:intron | 45.0% |
| TTGGAGGCCAAAACCAAATG+AGG | + | chr1_3:29106313-29106332 | None:intergenic | 45.0% | |
| ! | GATGATTTGGGGAGGAACAT+AGG | - | chr1_3:29106759-29106778 | Msa0113290:intron | 45.0% |
| AGCAAGAAATGCCCCAACTT+TGG | - | chr1_3:29107196-29107215 | Msa0113290:intron | 45.0% | |
| GGGAACATGTTGTCCAAAGT+TGG | + | chr1_3:29107212-29107231 | None:intergenic | 45.0% | |
| !! | GATTTTGGCGACAACGTCAA+TGG | + | chr1_3:29107286-29107305 | None:intergenic | 45.0% |
| ! | CAAAGTCGTGGTGATGATGA+TGG | + | chr1_3:29107374-29107393 | None:intergenic | 45.0% |
| CATCATCATCACCACGACTT+TGG | - | chr1_3:29107372-29107391 | Msa0113290:intron | 45.0% | |
| ! | TTTGACTAGTTCGACATCCG+AGG | + | chr1_3:29107445-29107464 | None:intergenic | 45.0% |
| AAACTCATGGTCATGGGAGA+AGG | - | chr1_3:29107462-29107481 | Msa0113290:intron | 45.0% | |
| TGAGAATTGTAGCCGAGAAG+TGG | - | chr1_3:29107524-29107543 | Msa0113290:intron | 45.0% | |
| ! | CACATGAAGGGAAGTTTTCC+CGG | + | chr1_3:29107604-29107623 | None:intergenic | 45.0% |
| AGCAAAACTGCTACCATCTC+TGG | + | chr1_3:29107645-29107664 | None:intergenic | 45.0% | |
| TTCTAACTGTGGGATCTGCA+TGG | + | chr1_3:29107674-29107693 | None:intergenic | 45.0% | |
| ! | CCATCAACGGTTCTAACTGT+GGG | + | chr1_3:29107684-29107703 | None:intergenic | 45.0% |
| ! | ACCATCAACGGTTCTAACTG+TGG | + | chr1_3:29107685-29107704 | None:intergenic | 45.0% |
| !! | CAAAGGTGTCACACCATCAA+CGG | + | chr1_3:29107697-29107716 | None:intergenic | 45.0% |
| ! | TGATGGTGTGACACCTTTGT+TGG | - | chr1_3:29107698-29107717 | Msa0113290:intron | 45.0% |
| TCAATGAGTGGATGTCTGGA+TGG | - | chr1_3:29107896-29107915 | Msa0113290:intron | 45.0% | |
| ATGTCTGGATGGCCCATTAA+CGG | - | chr1_3:29107907-29107926 | Msa0113290:intron | 45.0% | |
| TTGCCGTGTACGGTATATTG+GGG | + | chr1_3:29107980-29107999 | None:intergenic | 45.0% | |
| GTTTGCCGTGTACGGTATAT+TGG | + | chr1_3:29107982-29108001 | None:intergenic | 45.0% | |
| AAGAGAGAGTTTGCCGTGTA+CGG | + | chr1_3:29107990-29108009 | None:intergenic | 45.0% | |
| CCTCAAGTTCTCTTCAGATG+GGG | + | chr1_3:29108015-29108034 | None:intergenic | 45.0% | |
| GCCTCAAGTTCTCTTCAGAT+GGG | + | chr1_3:29108016-29108035 | None:intergenic | 45.0% | |
| TGCCTCAAGTTCTCTTCAGA+TGG | + | chr1_3:29108017-29108036 | None:intergenic | 45.0% | |
| ACAACGGCAATAAGGAGAGA+AGG | + | chr1_3:29108113-29108132 | None:intergenic | 45.0% | |
| TCCAACAAGTGGTATCAGAG+CGG | - | chr1_3:29108314-29108333 | Msa0113290:intron | 45.0% | |
| ! | TTGTACCGATGGTCACTACA+TGG | - | chr1_3:29108578-29108597 | Msa0113290:intron | 45.0% |
| CACACTTAAGAGTTGCTGAG+TGG | - | chr1_3:29109950-29109969 | Msa0113290:intron | 45.0% | |
| !! | AGGCACTACCGACTTAATGT+AGG | + | chr1_3:29110013-29110032 | None:intergenic | 45.0% |
| !!! | AGCTGTTTTAGTCGGCCAAA+AGG | - | chr1_3:29110218-29110237 | Msa0113290:intron | 45.0% |
| !! | GTTTTAGTCGGCCAAAAGGA+AGG | - | chr1_3:29110222-29110241 | Msa0113290:intron | 45.0% |
| TACCGCATATTTACCATCGC+AGG | + | chr1_3:29110273-29110292 | None:intergenic | 45.0% | |
| !! | AAAGGCACCCATTATCTGAC+CGG | - | chr1_3:29110329-29110348 | Msa0113290:intron | 45.0% |
| TGACATCCTCATTACCCACA+TGG | + | chr1_3:29110508-29110527 | None:intergenic | 45.0% | |
| !! | AAAGGCACCCATTATCTGAC+AGG | - | chr1_3:29110329-29110348 | Msa0113290:intron | 45.0% |
| TTATGATCACACGTGGCCTA+TGG | + | chr1_3:29111155-29111174 | None:intergenic | 45.0% | |
| TTGAGTTTGGGGGAGAGATA+TGG | - | chr1_3:29111972-29111991 | Msa0113290:intron | 45.0% | |
| ACTCAACACCCTCAAGAACT+AGG | - | chr1_3:29112136-29112155 | Msa0113290:CDS | 45.0% | |
| CTCAACACCCTCAAGAACTA+GGG | - | chr1_3:29112137-29112156 | Msa0113290:CDS | 45.0% | |
| AAAGTCTCTCTCGGTGATTG+AGG | + | chr1_3:29112742-29112761 | None:intergenic | 45.0% | |
| !!! | GTATGTCAGACTCTGGCTTT+TGG | - | chr1_3:29113012-29113031 | Msa0113290:intron | 45.0% |
| ! | TGCATTGATATGGTGGTCGT+CGG | - | chr1_3:29113589-29113608 | Msa0113290:intron | 45.0% |
| ! | CATTAATAATGGGACCACCG+CGG | + | chr1_3:29113647-29113666 | None:intergenic | 45.0% |
| ATGAGGTGGACCAGATTGTA+AGG | - | chr1_3:29113668-29113687 | Msa0113290:intron | 45.0% | |
| TCAATGAGTGGATGTCTGGA+TGG | - | chr1_3:29107896-29107915 | Msa0113290:intron | 45.0% | |
| ATGTCTGGATGGCCCATTAA+CGG | - | chr1_3:29107907-29107926 | Msa0113290:intron | 45.0% | |
| TTGCCGTGTACGGTATATTG+GGG | + | chr1_3:29107980-29107999 | None:intergenic | 45.0% | |
| GTTTGCCGTGTACGGTATAT+TGG | + | chr1_3:29107982-29108001 | None:intergenic | 45.0% | |
| AAGAGAGAGTTTGCCGTGTA+CGG | + | chr1_3:29107990-29108009 | None:intergenic | 45.0% | |
| CCTCAAGTTCTCTTCAGATG+GGG | + | chr1_3:29108015-29108034 | None:intergenic | 45.0% | |
| GCCTCAAGTTCTCTTCAGAT+GGG | + | chr1_3:29108016-29108035 | None:intergenic | 45.0% | |
| TGCCTCAAGTTCTCTTCAGA+TGG | + | chr1_3:29108017-29108036 | None:intergenic | 45.0% | |
| ACAACGGCAATAAGGAGAGA+AGG | + | chr1_3:29108113-29108132 | None:intergenic | 45.0% | |
| TTTGAGTAGCACCAAGGTTG+AGG | + | chr1_3:29114688-29114707 | None:intergenic | 45.0% | |
| !! | CAACCTTGGTGCTACTCAAA+TGG | - | chr1_3:29114688-29114707 | Msa0113290:CDS | 45.0% |
| CATCCATTTGAGTAGCACCA+AGG | + | chr1_3:29114694-29114713 | None:intergenic | 45.0% | |
| !! | CTTGGTGCTACTCAAATGGA+TGG | - | chr1_3:29114692-29114711 | Msa0113290:CDS | 45.0% |
| !!! | TAATATTTTCATTTTATTTA+AGG | + | chr1_3:29106721-29106740 | None:intergenic | 5.0% |
| !! | TTAAATAAAATGAAAATATT+AGG | - | chr1_3:29106720-29106739 | Msa0113290:intron | 5.0% |
| !! | ATTAACAAATAATTTAATAT+TGG | + | chr1_3:29107070-29107089 | None:intergenic | 5.0% |
| TTGGAAAGTGACGTCGCTGA+AGG | + | chr1_3:29104962-29104981 | None:intergenic | 50.0% | |
| ATCGCTGCATCTTAGCAGCA+AGG | - | chr1_3:29105007-29105026 | Msa0113290:CDS | 50.0% | |
| AGGATCCTCCTCCTCCTATT+GGG | + | chr1_3:29105086-29105105 | None:intergenic | 50.0% | |
| ATGACACCAGGTCGTACTGT+CGG | + | chr1_3:29105117-29105136 | None:intergenic | 50.0% | |
| !! | AGTACGACCTGGTGTCATTC+CGG | - | chr1_3:29105119-29105138 | Msa0113290:CDS | 50.0% |
| GTCATTCCGGTGAACTCAGT+CGG | - | chr1_3:29105132-29105151 | Msa0113290:CDS | 50.0% | |
| ACAGAAACTGCAACAGGAGG+AGG | + | chr1_3:29105170-29105189 | None:intergenic | 50.0% | |
| ! | GGTCTAGGCTCATGTTTCTG+AGG | + | chr1_3:29105216-29105235 | None:intergenic | 50.0% |
| CACCCTCTCTCACCACAATT+AGG | + | chr1_3:29105237-29105256 | None:intergenic | 50.0% | |
| ! | CAAAGTATCTAGCGGCAGCT+AGG | + | chr1_3:29105305-29105324 | None:intergenic | 50.0% |
| CTAGCTGCCGCTAGATACTT+TGG | - | chr1_3:29105303-29105322 | Msa0113290:intron | 50.0% | |
| ACAGCTTGCATTGCTCACTC+AGG | - | chr1_3:29105332-29105351 | Msa0113290:intron | 50.0% | |
| !! | TTTTCTGGCAAGCGGAGGAA+GGG | - | chr1_3:29105488-29105507 | Msa0113290:intron | 50.0% |
| GCAGAAGCAACTAGTGAGCA+TGG | - | chr1_3:29107122-29107141 | Msa0113290:intron | 50.0% | |
| ACCAGACTTGGCAACAAGGT+GGG | + | chr1_3:29107232-29107251 | None:intergenic | 50.0% | |
| ! | GCTTGGCTAGGATTTCAGGT+GGG | + | chr1_3:29107257-29107276 | None:intergenic | 50.0% |
| TGCTTGGCTAGGATTTCAGG+TGG | + | chr1_3:29107258-29107277 | None:intergenic | 50.0% | |
| AGGTGCTTGGCTAGGATTTC+AGG | + | chr1_3:29107261-29107280 | None:intergenic | 50.0% | |
| !! | AACGTCAATGGAGAGGTGCT+TGG | + | chr1_3:29107274-29107293 | None:intergenic | 50.0% |
| !! | GATGATGATGGTGATGGTGG+TGG | + | chr1_3:29107362-29107381 | None:intergenic | 50.0% |
| !! | GGTGATGATGATGGTGATGG+TGG | + | chr1_3:29107365-29107384 | None:intergenic | 50.0% |
| !! | CGTGGTGATGATGATGGTGA+TGG | + | chr1_3:29107368-29107387 | None:intergenic | 50.0% |
| CTTCGAAGTCACCAAAGTCG+TGG | + | chr1_3:29107386-29107405 | None:intergenic | 50.0% | |
| TTCGACATCCGAGGAGTCAA+GGG | + | chr1_3:29107436-29107455 | None:intergenic | 50.0% | |
| GTGAAAGCCCTCCTTGAACT+CGG | - | chr1_3:29107546-29107565 | Msa0113290:intron | 50.0% | |
| TGCTGCGGATGTTAACTACC+CGG | - | chr1_3:29107569-29107588 | Msa0113290:intron | 50.0% | |
| ! | ATGAAGGGAAGTTTTCCCGG+CGG | + | chr1_3:29107601-29107620 | None:intergenic | 50.0% |
| CGGGAAAACTTCCCTTCATG+TGG | - | chr1_3:29107602-29107621 | Msa0113290:intron | 50.0% | |
| CCCACAGTTAGAACCGTTGA+TGG | - | chr1_3:29107681-29107700 | Msa0113290:intron | 50.0% | |
| GGACTCAATGAGTGGATGTC+TGG | - | chr1_3:29107892-29107911 | Msa0113290:intron | 50.0% | |
| GGTCCCCAATATACCGTACA+CGG | - | chr1_3:29107974-29107993 | Msa0113290:intron | 50.0% | |
| CCCCATCTGAAGAGAACTTG+AGG | - | chr1_3:29108012-29108031 | Msa0113290:intron | 50.0% | |
| !! | AGGCATAAAGGTACCGGTTG+AGG | - | chr1_3:29108032-29108051 | Msa0113290:intron | 50.0% |
| AACATCAACACGGTTAGCGG+CGG | + | chr1_3:29108072-29108091 | None:intergenic | 50.0% | |
| TCCTTATTGCCGTTGTCGAG+AGG | - | chr1_3:29108117-29108136 | Msa0113290:intron | 50.0% | |
| CCTTATTGCCGTTGTCGAGA+GGG | - | chr1_3:29108118-29108137 | Msa0113290:intron | 50.0% | |
| TCATGTAGCCCTCTCGACAA+CGG | + | chr1_3:29108129-29108148 | None:intergenic | 50.0% | |
| ACCGCTCTGATACCACTTGT+TGG | + | chr1_3:29108318-29108337 | None:intergenic | 50.0% | |
| ! | AGAGTTGCTGAGTGGCCTTA+TGG | - | chr1_3:29109958-29109977 | Msa0113290:intron | 50.0% |
| CACACGTGGCCTATGGAATT+TGG | + | chr1_3:29111148-29111167 | None:intergenic | 50.0% | |
| ! | GGGGACACCTCTTTTGTGTT+AGG | - | chr1_3:29112618-29112637 | Msa0113290:intron | 50.0% |
| ! | GCATTGATATGGTGGTCGTC+GGG | - | chr1_3:29113590-29113609 | Msa0113290:intron | 50.0% |
| CATTGATATGGTGGTCGTCG+GGG | - | chr1_3:29113591-29113610 | Msa0113290:intron | 50.0% | |
| TAGCCCAAGTGGGAGATTGT+TGG | - | chr1_3:29113759-29113778 | Msa0113290:intron | 50.0% | |
| GGACTCAATGAGTGGATGTC+TGG | - | chr1_3:29107892-29107911 | Msa0113290:intron | 50.0% | |
| GGTCCCCAATATACCGTACA+CGG | - | chr1_3:29107974-29107993 | Msa0113290:intron | 50.0% | |
| CCCCATCTGAAGAGAACTTG+AGG | - | chr1_3:29108012-29108031 | Msa0113290:intron | 50.0% | |
| !! | AGGCATAAAGGTACCGGTTG+AGG | - | chr1_3:29108032-29108051 | Msa0113290:intron | 50.0% |
| AACATCAACACGGTTAGCGG+CGG | + | chr1_3:29108072-29108091 | None:intergenic | 50.0% | |
| TCCTTATTGCCGTTGTCGAG+AGG | - | chr1_3:29108117-29108136 | Msa0113290:intron | 50.0% | |
| CCTTATTGCCGTTGTCGAGA+GGG | - | chr1_3:29108118-29108137 | Msa0113290:intron | 50.0% | |
| TCATGTAGCCCTCTCGACAA+CGG | + | chr1_3:29108129-29108148 | None:intergenic | 50.0% | |
| !! | CTCTTCAAAGGTGCTGTTCC+TGG | - | chr1_3:29114419-29114438 | Msa0113290:CDS | 50.0% |
| GATCATAGCAGCAGTAGCAG+TGG | - | chr1_3:29114602-29114621 | Msa0113290:CDS | 50.0% | |
| GAAGCCATGAATCGTCGTCA+AGG | - | chr1_3:29114749-29114768 | Msa0113290:CDS | 50.0% | |
| ACCACCTTGACGACGATTCA+TGG | + | chr1_3:29114756-29114775 | None:intergenic | 50.0% | |
| AATCGTCGTCAAGGTGGTCA+TGG | - | chr1_3:29114758-29114777 | Msa0113290:CDS | 50.0% | |
| ! | GGCCGTTGATGAGGAGATTC+AGG | + | chr1_3:29104936-29104955 | None:intergenic | 55.0% |
| TGAAGGCTTGGCCGTTGATG+AGG | + | chr1_3:29104945-29104964 | None:intergenic | 55.0% | |
| AAGTGACGTCGCTGAAGGCT+TGG | + | chr1_3:29104957-29104976 | None:intergenic | 55.0% | |
| TTGGGTCTAGTCCCGAAGGT+GGG | + | chr1_3:29105068-29105087 | None:intergenic | 55.0% | |
| ATTGGGTCTAGTCCCGAAGG+TGG | + | chr1_3:29105069-29105088 | None:intergenic | 55.0% | |
| CCTATTGGGTCTAGTCCCGA+AGG | + | chr1_3:29105072-29105091 | None:intergenic | 55.0% | |
| CCTTCGGGACTAGACCCAAT+AGG | - | chr1_3:29105069-29105088 | Msa0113290:CDS | 55.0% | |
| TCGGGACTAGACCCAATAGG+AGG | - | chr1_3:29105072-29105091 | Msa0113290:CDS | 55.0% | |
| GGACTAGACCCAATAGGAGG+AGG | - | chr1_3:29105075-29105094 | Msa0113290:CDS | 55.0% | |
| CTAGACCCAATAGGAGGAGG+AGG | - | chr1_3:29105078-29105097 | Msa0113290:CDS | 55.0% | |
| GAGGATCCTCCTCCTCCTAT+TGG | + | chr1_3:29105087-29105106 | None:intergenic | 55.0% | |
| GAGTTCACCGGAATGACACC+AGG | + | chr1_3:29105129-29105148 | None:intergenic | 55.0% | |
| TCGTAGCCGACTGAGTTCAC+CGG | + | chr1_3:29105141-29105160 | None:intergenic | 55.0% | |
| ! | ATTGTGGTGAGAGAGGGTGC+TGG | - | chr1_3:29105238-29105257 | Msa0113290:CDS | 55.0% |
| AAGGGCAAGATCAACGGCTG+AGG | + | chr1_3:29105277-29105296 | None:intergenic | 55.0% | |
| ! | AGCGGCAGCTAGGGTATCAA+GGG | + | chr1_3:29105295-29105314 | None:intergenic | 55.0% |
| ! | TAGCGGCAGCTAGGGTATCA+AGG | + | chr1_3:29105296-29105315 | None:intergenic | 55.0% |
| !! | GTTTTCTGGCAAGCGGAGGA+AGG | - | chr1_3:29105487-29105506 | Msa0113290:intron | 55.0% |
| TCCCACCTTGTTGCCAAGTC+TGG | - | chr1_3:29107228-29107247 | Msa0113290:intron | 55.0% | |
| GACCAGACTTGGCAACAAGG+TGG | + | chr1_3:29107233-29107252 | None:intergenic | 55.0% | |
| GGAGACCAGACTTGGCAACA+AGG | + | chr1_3:29107236-29107255 | None:intergenic | 55.0% | |
| TTCAGGTGGGAGACCAGACT+TGG | + | chr1_3:29107244-29107263 | None:intergenic | 55.0% | |
| !! | CAATGGAGAGGTGCTTGGCT+AGG | + | chr1_3:29107269-29107288 | None:intergenic | 55.0% |
| TGGCGACAACGTCAATGGAG+AGG | + | chr1_3:29107281-29107300 | None:intergenic | 55.0% | |
| CATTAAGGAGCGGCGTGCTA+AGG | + | chr1_3:29107331-29107350 | None:intergenic | 55.0% | |
| GGTGGAGTGGCATTAAGGAG+CGG | + | chr1_3:29107341-29107360 | None:intergenic | 55.0% | |
| !! | GTGGTGGTGGAGTGGCATTA+AGG | + | chr1_3:29107346-29107365 | None:intergenic | 55.0% |
| !! | GATGATGGTGATGGTGGTGG+TGG | + | chr1_3:29107359-29107378 | None:intergenic | 55.0% |
| ACCAGAAGATCCGCCGAATG+AGG | - | chr1_3:29107406-29107425 | Msa0113290:intron | 55.0% | |
| AGAAGATCCGCCGAATGAGG+CGG | - | chr1_3:29107409-29107428 | Msa0113290:intron | 55.0% | |
| GTTCGACATCCGAGGAGTCA+AGG | + | chr1_3:29107437-29107456 | None:intergenic | 55.0% | |
| GGAGGGCTTTCACCACTTCT+CGG | + | chr1_3:29107539-29107558 | None:intergenic | 55.0% | |
| ! | TGAAGGGAAGTTTTCCCGGC+GGG | + | chr1_3:29107600-29107619 | None:intergenic | 55.0% |
| CATCTCGGCAGCCACATGAA+GGG | + | chr1_3:29107616-29107635 | None:intergenic | 55.0% | |
| CATCTCTGGCGACACCATCT+CGG | + | chr1_3:29107631-29107650 | None:intergenic | 55.0% | |
| CCCTCTCGACAACGGCAATA+AGG | + | chr1_3:29108121-29108140 | None:intergenic | 55.0% | |
| ! | GCCAAAAGGAAGGCACAGCT+TGG | - | chr1_3:29110232-29110251 | Msa0113290:intron | 55.0% |
| ! | GCCAAGCTGTGCCTTCCTTT+TGG | + | chr1_3:29110236-29110255 | None:intergenic | 55.0% |
| TATGTCAGTGACGACAGCCG+CGG | - | chr1_3:29113627-29113646 | Msa0113290:intron | 55.0% | |
| CCCTCTCGACAACGGCAATA+AGG | + | chr1_3:29108121-29108140 | None:intergenic | 55.0% | |
| GCCATGAATCGTCGTCAAGG+TGG | - | chr1_3:29114752-29114771 | Msa0113290:CDS | 55.0% | |
| TCTAGTCCCGAAGGTGGGTC+CGG | + | chr1_3:29105063-29105082 | None:intergenic | 60.0% | |
| ! | TCGTACTGTCGGCTGACGAG+AGG | + | chr1_3:29105106-29105125 | None:intergenic | 60.0% |
| GGTGAACTCAGTCGGCTACG+AGG | - | chr1_3:29105140-29105159 | Msa0113290:CDS | 60.0% | |
| TGGCAAGCGGAGGAAGGGAA+AGG | - | chr1_3:29105493-29105512 | Msa0113290:CDS | 60.0% | |
| GGCAAGCGGAGGAAGGGAAA+GGG | - | chr1_3:29105494-29105513 | Msa0113290:CDS | 60.0% | |
| GCGGAGGAAGGGAAAGGGTA+TGG | - | chr1_3:29105499-29105518 | Msa0113290:CDS | 60.0% | |
| TAAGGAGCGGCGTGCTAAGG+AGG | + | chr1_3:29107328-29107347 | None:intergenic | 60.0% | |
| !! | TGGTGATGGTGGTGGTGGAG+TGG | + | chr1_3:29107354-29107373 | None:intergenic | 60.0% |
| GCCTCATTCGGCGGATCTTC+TGG | + | chr1_3:29107410-29107429 | None:intergenic | 60.0% | |
| GAAGATCCGCCGAATGAGGC+GGG | - | chr1_3:29107410-29107429 | Msa0113290:intron | 60.0% | |
| AGTCAAGGGCCCGCCTCATT+CGG | + | chr1_3:29107422-29107441 | None:intergenic | 60.0% | |
| ! | CGCAGCACCGAGTTCAAGGA+GGG | + | chr1_3:29107556-29107575 | None:intergenic | 60.0% |
| !! | CCTCCTTGAACTCGGTGCTG+CGG | - | chr1_3:29107554-29107573 | Msa0113290:intron | 60.0% |
| ! | CATCCGCAGCACCGAGTTCA+AGG | + | chr1_3:29107560-29107579 | None:intergenic | 60.0% |
| GCGGATGTTAACTACCCGGC+TGG | - | chr1_3:29107573-29107592 | Msa0113290:intron | 60.0% | |
| CCATCTCGGCAGCCACATGA+AGG | + | chr1_3:29107617-29107636 | None:intergenic | 60.0% | |
| CCTTCATGTGGCTGCCGAGA+TGG | - | chr1_3:29107614-29107633 | Msa0113290:intron | 60.0% | |
| !! | CGAGATGGTGTCGCCAGAGA+TGG | - | chr1_3:29107629-29107648 | Msa0113290:intron | 60.0% |
| ACGGTTAGCGGCGGCTGATT+TGG | + | chr1_3:29108063-29108082 | None:intergenic | 60.0% | |
| ACGGTTAGCGGCGGCTGATT+TGG | + | chr1_3:29108063-29108082 | None:intergenic | 60.0% | |
| TTGTGGGCCGGACCCACCTT+CGG | - | chr1_3:29105053-29105072 | Msa0113290:CDS | 65.0% | |
| CGTCAGCCGACAGTACGACC+TGG | - | chr1_3:29105108-29105127 | Msa0113290:CDS | 65.0% | |
| ! | CCGCAGCACCGAGTTCAAGG+AGG | + | chr1_3:29107557-29107576 | None:intergenic | 65.0% |
| TGTGGGCCGGACCCACCTTC+GGG | - | chr1_3:29105054-29105073 | Msa0113290:CDS | 70.0% | |
| CAAGGGCCCGCCTCATTCGG+CGG | + | chr1_3:29107419-29107438 | None:intergenic | 70.0% | |
| GAGGCGGGCCCTTGACTCCT+CGG | - | chr1_3:29107425-29107444 | Msa0113290:intron | 70.0% | |
| AACTACCCGGCTGGACCCGC+CGG | - | chr1_3:29107582-29107601 | Msa0113290:intron | 70.0% | |
| ! | TTTTCCCGGCGGGTCCAGCC+GGG | + | chr1_3:29107590-29107609 | None:intergenic | 70.0% |
| ! | GTTTTCCCGGCGGGTCCAGC+CGG | + | chr1_3:29107591-29107610 | None:intergenic | 70.0% |
| GTCAGTGACGACAGCCGCGG+TGG | - | chr1_3:29113630-29113649 | Msa0113290:intron | 70.0% | |
| ACTACCCGGCTGGACCCGCC+GGG | - | chr1_3:29107583-29107602 | Msa0113290:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 29104892 | 29114820 | 29104892 | ID=Msa0113290;Name=Msa0113290 |
| chr1_3 | mRNA | 29104892 | 29114820 | 29104892 | ID=Msa0113290-mRNA-1;Parent=Msa0113290;Name=Msa0113290-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.25|0|0.6|1|1|5|0|523 |
| chr1_3 | exon | 29114359 | 29114820 | 29114359 | ID=Msa0113290-mRNA-1:exon:9640;Parent=Msa0113290-mRNA-1 |
| chr1_3 | exon | 29112010 | 29112586 | 29112010 | ID=Msa0113290-mRNA-1:exon:9639;Parent=Msa0113290-mRNA-1 |
| chr1_3 | exon | 29111551 | 29111606 | 29111551 | ID=Msa0113290-mRNA-1:exon:9638;Parent=Msa0113290-mRNA-1 |
| chr1_3 | exon | 29105490 | 29105545 | 29105490 | ID=Msa0113290-mRNA-1:exon:9637;Parent=Msa0113290-mRNA-1 |
| chr1_3 | exon | 29104892 | 29105312 | 29104892 | ID=Msa0113290-mRNA-1:exon:9636;Parent=Msa0113290-mRNA-1 |
| chr1_3 | CDS | 29114359 | 29114820 | 29114359 | ID=Msa0113290-mRNA-1:cds;Parent=Msa0113290-mRNA-1 |
| chr1_3 | CDS | 29112010 | 29112586 | 29112010 | ID=Msa0113290-mRNA-1:cds;Parent=Msa0113290-mRNA-1 |
| chr1_3 | CDS | 29111551 | 29111606 | 29111551 | ID=Msa0113290-mRNA-1:cds;Parent=Msa0113290-mRNA-1 |
| chr1_3 | CDS | 29105490 | 29105545 | 29105490 | ID=Msa0113290-mRNA-1:cds;Parent=Msa0113290-mRNA-1 |
| chr1_3 | CDS | 29104892 | 29105312 | 29104892 | ID=Msa0113290-mRNA-1:cds;Parent=Msa0113290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
