AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0114820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0114820 MtrunA17_Chr2g0312161 88.795 830 43 6 1 781 1 829 0.0 1442
Msa0114820 MtrunA17_Chr2g0319221 58.730 63 22 1 1 63 1 59 6.67e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0114820 AT1G04390.1 38.290 807 442 11 23 781 10 808 2.45e-163 501

Find 192 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTGTTATTAACTTAAT+TGG 0.088135 1_3:-33084487 Msa0114820:CDS
GGAATCTGCTGCTGATATTT+TGG 0.141395 1_3:-33086196 Msa0114820:CDS
AGTTTATTGACTTGTCATTT+TGG 0.150287 1_3:-33083322 Msa0114820:three_prime_UTR
TCTTATATTCTAAGTTATTT+TGG 0.154673 1_3:-33084085 Msa0114820:CDS
CTCCTTCATATAGGCAATTA+AGG 0.156017 1_3:-33082123 Msa0114820:three_prime_UTR
GCTTGGTGAGTTCTGGATTT+TGG 0.177722 1_3:-33082281 Msa0114820:three_prime_UTR
TGCAAACTGTATTCCATAAA+AGG 0.232443 1_3:-33084327 Msa0114820:CDS
AGACCTGGTGCCAAGGTTTA+AGG 0.234948 1_3:+33087677 None:intergenic
CTCTCTCATCCCACAAATTA+TGG 0.241887 1_3:+33085314 None:intergenic
CTAAAGCTGTACACATCTTT+AGG 0.249325 1_3:-33085715 Msa0114820:intron
ATTGTTGGAATATGTATATT+TGG 0.255950 1_3:-33083798 Msa0114820:CDS
TTGTGCTACTGCTTTGAATT+TGG 0.257052 1_3:-33085998 Msa0114820:CDS
TTTGTTGGCTTGGTGAGTTC+TGG 0.258921 1_3:-33082288 Msa0114820:three_prime_UTR
GCTATGTTACAGTTTATATT+AGG 0.264244 1_3:-33081815 Msa0114820:three_prime_UTR
GCAAAGGAATGTCTAGTAAA+AGG 0.277394 1_3:+33084209 None:intergenic
AAGAGAGTTCCCAATCCTTT+TGG 0.277839 1_3:+33084036 None:intergenic
CTCCAATGGCAAAACAATTT+CGG 0.283584 1_3:+33085119 None:intergenic
GGCAATTAAAATAATCAAAA+TGG 0.286723 1_3:-33082197 Msa0114820:three_prime_UTR
GTCTGGATGTGATTATTTAC+AGG 0.297365 1_3:-33083088 Msa0114820:three_prime_UTR
ATAGTTGTTCTCAATCCTTT+TGG 0.298736 1_3:+33085278 None:intergenic
AACATTTGTTTAAGTAGTTT+AGG 0.303571 1_3:-33083249 Msa0114820:three_prime_UTR
TCAGGGATAATATATAATCT+AGG 0.310303 1_3:+33084536 None:intergenic
TCCATAAAAGGTCTTGTTGC+TGG 0.312735 1_3:-33084315 Msa0114820:CDS
TTGTTGGAATATGTATATTT+GGG 0.319518 1_3:-33083797 Msa0114820:CDS
CAGTCATTCACAAGTTATAA+AGG 0.319849 1_3:-33082449 Msa0114820:three_prime_UTR
AAGGAAGCTACTCAAGTATA+TGG 0.321915 1_3:+33083495 None:intergenic
GGTAACTGTTACAGTTAGTT+AGG 0.324663 1_3:-33081794 Msa0114820:three_prime_UTR
TATATGGAAGGAAATAAATA+TGG 0.328815 1_3:+33083511 None:intergenic
CTTCCACAAAGAGAGCTTAT+AGG 0.328839 1_3:+33082174 None:intergenic
TTTCTGCAGCTTCACATTTG+TGG 0.335071 1_3:-33084749 Msa0114820:intron
TAGCCTAACAGCTCAAAATA+AGG 0.350134 1_3:+33081834 None:intergenic
GATTGGGAACTCTCTTAATA+AGG 0.355453 1_3:-33084029 Msa0114820:CDS
AAAAGGATTGAGAACAACTA+TGG 0.357983 1_3:-33085276 Msa0114820:CDS
TGTTGAGGTGGCCTTCATCT+AGG 0.358318 1_3:-33085822 Msa0114820:CDS
GCAAAACAATTTCGGAAGAT+TGG 0.358748 1_3:+33085127 None:intergenic
AACTTGTTATTAACTTAATT+GGG 0.359198 1_3:-33084486 Msa0114820:CDS
ATTAAAACAGCCCTTGATAC+TGG 0.361067 1_3:+33084664 None:intergenic
TGAAGCATTGATGTTATTGT+TGG 0.363458 1_3:-33083813 Msa0114820:CDS
TAATGGAAGCTAAATTGAAT+TGG 0.363985 1_3:-33083182 Msa0114820:three_prime_UTR
ATGTTCGGATAGAGGGGTTT+CGG 0.364447 1_3:-33085502 Msa0114820:CDS
CAATAGAAGCGGAATAAATA+AGG 0.367946 1_3:+33082059 None:intergenic
AGATTCTTCTAGATATCTAT+AGG 0.370144 1_3:-33083583 Msa0114820:CDS
TTGCGACTCATTGTAGCAAA+TGG 0.377835 1_3:-33083992 Msa0114820:CDS
TCGGCTTGCTCAATGTCTAT+TGG 0.377904 1_3:-33085483 Msa0114820:intron
AAAGTATTCAGGAAGCTTGC+TGG 0.379435 1_3:-33082258 Msa0114820:three_prime_UTR
TCCTTCATATAGGCAATTAA+GGG 0.380231 1_3:-33082122 Msa0114820:three_prime_UTR
AGTTATGTGTGGGACGTTCT+TGG 0.385008 1_3:-33085039 Msa0114820:CDS
AACAAACACGGTTGCAATAG+TGG 0.393093 1_3:+33086081 None:intergenic
AGAAAATTGTTTAAAAGTGA+TGG 0.395093 1_3:-33085364 Msa0114820:CDS
AAAATGACAAGTCAATAAAC+TGG 0.400238 1_3:+33083324 None:intergenic
GCTAAATTGAATTGGCTTGT+TGG 0.400345 1_3:-33083174 Msa0114820:three_prime_UTR
TTGATGAAAAGACAAATAGA+TGG 0.406878 1_3:-33087560 Msa0114820:CDS
AAAAGGTCTTGTTGCTGGAT+TGG 0.407271 1_3:-33084310 Msa0114820:CDS
TATGTGGAGCTTTGTTGGCT+TGG 0.408026 1_3:-33082298 Msa0114820:three_prime_UTR
AGTTCAACATCATTACAAAC+AGG 0.413790 1_3:+33085796 None:intergenic
ACTATTGCAACCGTGTTTGT+TGG 0.414256 1_3:-33086079 Msa0114820:CDS
TTATAAAGGTTGATATTAGC+TGG 0.423730 1_3:-33082435 Msa0114820:three_prime_UTR
CTTCTCCATTCCTTAAACCT+TGG 0.423873 1_3:-33087687 Msa0114820:CDS
CAACTATGGTTCTGTATTAG+TGG 0.423956 1_3:-33085262 Msa0114820:CDS
TGCGACTCATTGTAGCAAAT+GGG 0.425092 1_3:-33083991 Msa0114820:CDS
AGCCATATGTGGAGCTTTGT+TGG 0.425519 1_3:-33082303 Msa0114820:three_prime_UTR
TATAGATATCTAGAAGAATC+TGG 0.427973 1_3:+33083585 None:intergenic
CCCTCATGATGTTCGGATAG+AGG 0.430203 1_3:-33085510 Msa0114820:CDS
TTACAGGGTTTGTTCAGATC+AGG 0.430822 1_3:-33083072 Msa0114820:three_prime_UTR
GGGGATTCCGTGAGTGTTCA+TGG 0.433973 1_3:-33083971 Msa0114820:CDS
TGGAATACAGTTTGCAAATG+AGG 0.436839 1_3:+33084334 None:intergenic
CTATAAACTGGATAATAGAA+TGG 0.438864 1_3:+33083368 None:intergenic
TTGTTGATGCCATAATTTGT+GGG 0.444369 1_3:-33085323 Msa0114820:CDS
GTTATGTGTGGGACGTTCTT+GGG 0.450565 1_3:-33085038 Msa0114820:CDS
TATATTTCGAACAATGCAAA+TGG 0.452695 1_3:+33085909 None:intergenic
TCTGTAAAATATCAATTTCA+AGG 0.455343 1_3:+33083476 None:intergenic
TAAGCTCTCTTTGTGGAAGT+TGG 0.457752 1_3:-33082170 Msa0114820:three_prime_UTR
TGCAAATGAGGAGCAACCTC+TGG 0.459121 1_3:+33084346 None:intergenic
TTCAAGGTGAACCAGTATCA+AGG 0.459159 1_3:-33084675 Msa0114820:CDS
AGATGAAGTAAGATTAAAGC+TGG 0.462284 1_3:+33083652 None:intergenic
ACTTCATCTCTTGATTCAGC+TGG 0.463446 1_3:-33083638 Msa0114820:CDS
CTTTCAGTCCTGGAGTGAAA+TGG 0.463586 1_3:-33084114 Msa0114820:CDS
TCTGATATACTGAAGGTCAT+AGG 0.465492 1_3:-33084589 Msa0114820:CDS
CCTCATGATGTTCGGATAGA+GGG 0.466662 1_3:-33085509 Msa0114820:CDS
CACAAAGTTATATTGCAGTC+TGG 0.467245 1_3:-33083105 Msa0114820:three_prime_UTR
ACTCTCATGGGTATAACTAC+AGG 0.470412 1_3:+33084981 None:intergenic
CTGCAAAGCATTTGCAAGAG+AGG 0.471231 1_3:+33083704 None:intergenic
AATGGAGAAGACGGCGATGA+AGG 0.471770 1_3:+33087700 None:intergenic
TGATATGAAGTTCACTCTCA+TGG 0.474270 1_3:+33084968 None:intergenic
ATGGATATTTGTTTCTCCAA+TGG 0.474322 1_3:+33085105 None:intergenic
AATTGAATTGGCTTGTTGGA+TGG 0.479401 1_3:-33083170 Msa0114820:three_prime_UTR
TCTTGATTCTTCTAAGCAGT+TGG 0.480319 1_3:-33082218 Msa0114820:three_prime_UTR
GTAAGATTAAAGCTGGGAAA+AGG 0.480512 1_3:+33083659 None:intergenic
AGCCAACAAAGCTCCACATA+TGG 0.482790 1_3:+33082301 None:intergenic
AATCTAACCCTCATGATGTT+CGG 0.483450 1_3:-33085517 Msa0114820:CDS
GGAAAAGGTGTGCCCCACTT+TGG 0.488293 1_3:+33083674 None:intergenic
AGTAGCACCTCTTTCAGTCC+TGG 0.489560 1_3:-33084124 Msa0114820:CDS
ATTTGTGGGATGAGAGAGAC+AGG 0.492475 1_3:-33085309 Msa0114820:CDS
TGGTTGTTTGTGGGTTAACA+TGG 0.493074 1_3:-33082353 Msa0114820:three_prime_UTR
TCTGAAAGGACTGTTAAACT+TGG 0.494623 1_3:-33083420 Msa0114820:three_prime_UTR
TGAACATGCATATGTGGTAC+TGG 0.495754 1_3:+33083126 None:intergenic
ATTCAATTTGCAGCCATATG+TGG 0.496585 1_3:-33082314 Msa0114820:three_prime_UTR
CAGGGATAATATATAATCTA+GGG 0.497938 1_3:+33084537 None:intergenic
TATAAAGGTTGATATTAGCT+GGG 0.501910 1_3:-33082434 Msa0114820:three_prime_UTR
ATTCCTTAAACCTTGGCACC+AGG 0.502270 1_3:-33087680 Msa0114820:intron
GTCTCATAGCTCCTTCATAT+AGG 0.503354 1_3:-33082132 Msa0114820:three_prime_UTR
ACAAATGATTGTGCAGGCGA+TGG 0.504540 1_3:-33085543 Msa0114820:CDS
GTAGGCTGCAAGAAAAGCTT+GGG 0.508267 1_3:-33081737 Msa0114820:three_prime_UTR
CATTGATTAAACTAGTACAT+TGG 0.512817 1_3:-33082408 Msa0114820:three_prime_UTR
CTCTCATGGGTATAACTACA+GGG 0.512953 1_3:+33084982 None:intergenic
ATTGAATTGGCTTGTTGGAT+GGG 0.513309 1_3:-33083169 Msa0114820:three_prime_UTR
TGGCCTATAAGCTCTCTTTG+TGG 0.514178 1_3:-33082177 Msa0114820:three_prime_UTR
GCTGGATTGGTAAAGGAGAC+TGG 0.514721 1_3:-33084297 Msa0114820:CDS
CTTGTTGATGCCATAATTTG+TGG 0.517271 1_3:-33085324 Msa0114820:CDS
ATTTCTACAAATGATTGTGC+AGG 0.517797 1_3:-33085549 Msa0114820:CDS
TCTTGTTGCTGGATTGGTAA+AGG 0.518147 1_3:-33084304 Msa0114820:CDS
ATTTGATGCCATGCTTAACA+AGG 0.520764 1_3:+33086137 None:intergenic
CCCTCTATCCGAACATCATG+AGG 0.521428 1_3:+33085509 None:intergenic
TCCTTTGCAATTTAGTAGAG+AGG 0.521866 1_3:-33084194 Msa0114820:CDS
TCTATTGAACTTAACCATGA+AGG 0.522377 1_3:-33082043 Msa0114820:three_prime_UTR
GAGAGAGAGACCTGGTGCCA+AGG 0.523511 1_3:+33087670 None:intergenic
TACAGTTATGATTCATTCGA+CGG 0.524471 1_3:-33087790 Msa0114820:exon
AGTAGGCTGCAAGAAAAGCT+TGG 0.524766 1_3:-33081738 Msa0114820:three_prime_UTR
CAAATGATTGTGCAGGCGAT+GGG 0.525532 1_3:-33085542 Msa0114820:CDS
ATGGAGAAGACGGCGATGAA+GGG 0.526641 1_3:+33087701 None:intergenic
GTAATGATATTCATGTAGAA+AGG 0.527922 1_3:-33084369 Msa0114820:CDS
TGTAGCACAAAAGCTTATAG+AGG 0.528432 1_3:-33085582 Msa0114820:CDS
TCCCTTAATTGCCTATATGA+AGG 0.529685 1_3:+33082121 None:intergenic
GCACAAAAGCTTATAGAGGA+TGG 0.531800 1_3:-33085578 Msa0114820:CDS
CAATTAAGTTAATAACAAGT+TGG 0.532753 1_3:+33084488 None:intergenic
CACGGTTGCAATAGTGGACT+CGG 0.534163 1_3:+33086087 None:intergenic
AGACAGGGCCGTGTTCCAAA+AGG 0.534873 1_3:-33085293 Msa0114820:CDS
TGAGCACAATTCTGTTGAGG+TGG 0.536544 1_3:-33085834 Msa0114820:CDS
ATAAGAGTTGCGTTTCTGAA+AGG 0.539156 1_3:-33083434 Msa0114820:three_prime_UTR
AAAAGACAAATAGATGGAAG+TGG 0.544965 1_3:-33087554 Msa0114820:CDS
GATGAAGTAAGATTAAAGCT+GGG 0.545003 1_3:+33083653 None:intergenic
ACTTCTGAAGGTAGAAGTGC+TGG 0.546217 1_3:+33083926 None:intergenic
CTGGATTGGTAAAGGAGACT+GGG 0.546314 1_3:-33084296 Msa0114820:CDS
TTGGAATATGTATATTTGGG+AGG 0.551105 1_3:-33083794 Msa0114820:CDS
GATTCATTCGACGGTGAAAG+CGG 0.556753 1_3:-33087781 Msa0114820:CDS
TTGCAGACAATCTCCAAAGT+GGG 0.558280 1_3:-33083687 Msa0114820:CDS
TTTCACTCCAGGACTGAAAG+AGG 0.560173 1_3:+33084117 None:intergenic
TGGTGCCAAGGTTTAAGGAA+TGG 0.562873 1_3:+33087682 None:intergenic
AATAAATATGGAAATAAACA+TGG 0.567158 1_3:+33083523 None:intergenic
ATGGTTAAGTTCAATAGAAG+CGG 0.567320 1_3:+33082048 None:intergenic
TCTGGATGTGATTATTTACA+GGG 0.570759 1_3:-33083087 Msa0114820:three_prime_UTR
TCAAGGTGAACCAGTATCAA+GGG 0.573541 1_3:-33084674 Msa0114820:CDS
ACCATAAAATAAGACAACAT+TGG 0.575853 1_3:+33084267 None:intergenic
ATTGGAGAAACAAATATCCA+TGG 0.576382 1_3:-33085103 Msa0114820:intron
GAAACATACCATTTCACTCC+AGG 0.577863 1_3:+33084106 None:intergenic
GATATGAAGTTCACTCTCAT+GGG 0.583514 1_3:+33084969 None:intergenic
GATTATCAACTCTCTCTCGA+CGG 0.583579 1_3:-33087824 Msa0114820:five_prime_UTR
AAATGAGCCCTTGTTAAGCA+TGG 0.585174 1_3:-33086145 Msa0114820:CDS
ATGATACATCTTTGATACTG+TGG 0.585455 1_3:+33084442 None:intergenic
AAGCTACTCAAGTATATGGA+AGG 0.586317 1_3:+33083499 None:intergenic
GCGACTCATTGTAGCAAATG+GGG 0.586804 1_3:-33083990 Msa0114820:CDS
TGTATTATCTGATATACTGA+AGG 0.587784 1_3:-33084596 Msa0114820:CDS
ACCTCTCTACTAAATTGCAA+AGG 0.591394 1_3:+33084193 None:intergenic
CAAACAGGGAACCTAGATGA+AGG 0.594928 1_3:+33085811 None:intergenic
TACTTGATGTGAGGACAGCA+AGG 0.595534 1_3:+33086035 None:intergenic
AACCCACAAACAACCAGAAG+GGG 0.597408 1_3:+33082360 None:intergenic
ACTTTGTGAACATGCATATG+TGG 0.600186 1_3:+33083120 None:intergenic
GTTAAGCATGGCATCAAATG+TGG 0.600853 1_3:-33086133 Msa0114820:CDS
TTGCTCTGAGGAGTTATGTG+TGG 0.604086 1_3:-33085050 Msa0114820:CDS
TAATACAGATCTAGCATGTG+AGG 0.610195 1_3:+33084612 None:intergenic
TGCAACTTCTACTTGATGTG+AGG 0.612048 1_3:+33086026 None:intergenic
TGCTCTGAGGAGTTATGTGT+GGG 0.613589 1_3:-33085049 Msa0114820:CDS
GGGTGGCTTACAATTCATTG+TGG 0.615987 1_3:-33085018 Msa0114820:CDS
GGTTTAAGGAATGGAGAAGA+CGG 0.616386 1_3:+33087691 None:intergenic
CTCATGATGTTCGGATAGAG+GGG 0.616659 1_3:-33085508 Msa0114820:CDS
GATGTATCATAGAAAGCAGA+GGG 0.617898 1_3:-33084429 Msa0114820:CDS
TAACCCACAAACAACCAGAA+GGG 0.618235 1_3:+33082359 None:intergenic
AATAACACCATGAACACTCA+CGG 0.621202 1_3:+33083964 None:intergenic
TGTGAGGAAATATAATTACA+TGG 0.628481 1_3:+33084628 None:intergenic
TTTGCAGACAATCTCCAAAG+TGG 0.628783 1_3:-33083688 Msa0114820:CDS
TCAGATCAGGAATGCAAGAG+AGG 0.630141 1_3:-33083059 Msa0114820:intron
TTCTGCAAAGTCCTGTCAGT+AGG 0.633451 1_3:-33081755 Msa0114820:three_prime_UTR
TTAACCCACAAACAACCAGA+AGG 0.634727 1_3:+33082358 None:intergenic
TTTCAATTAGAAGATTAAGG+AGG 0.635301 1_3:+33085160 None:intergenic
ATGTGTGGGACGTTCTTGGG+TGG 0.646051 1_3:-33085035 Msa0114820:CDS
CTACTAGATAGCACTTCTGA+AGG 0.647267 1_3:+33083914 None:intergenic
TTTGATGCCATGCTTAACAA+GGG 0.651494 1_3:+33086138 None:intergenic
AGATGTATCATAGAAAGCAG+AGG 0.653768 1_3:-33084430 Msa0114820:CDS
ATTGGTAAAGGAGACTGGGA+AGG 0.660276 1_3:-33084292 Msa0114820:CDS
CCTCTATCCGAACATCATGA+GGG 0.663643 1_3:+33085510 None:intergenic
AAATTCAAAGCAGTAGCACA+AGG 0.669590 1_3:+33086000 None:intergenic
TGCAGACAATCTCCAAAGTG+GGG 0.673141 1_3:-33083686 Msa0114820:CDS
TCAATTATCATGTTGCTCTG+AGG 0.675945 1_3:-33085062 Msa0114820:CDS
ACCCACAAACAACCAGAAGG+GGG 0.681171 1_3:+33082361 None:intergenic
GTTCAACATCATTACAAACA+GGG 0.689432 1_3:+33085797 None:intergenic
TAGACAAGATCCAACAAACA+CGG 0.705372 1_3:+33086069 None:intergenic
TTAAAAGTGATGGATTCGTG+TGG 0.719236 1_3:-33085354 Msa0114820:CDS
TATTCATGTAGAAAGGCCAG+AGG 0.722961 1_3:-33084362 Msa0114820:CDS
TCTCATGGGTATAACTACAG+GGG 0.729707 1_3:+33084983 None:intergenic
TTTGTGGGATGAGAGAGACA+GGG 0.753747 1_3:-33085308 Msa0114820:CDS
GTTCGAAATATAAAAGACCG+CGG 0.753888 1_3:-33085898 Msa0114820:CDS
ATTCAATCTTCTGTGCACCG+CGG 0.760395 1_3:+33085881 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATAATAAAGGATATTT+TGG + chr1_3:33083148-33083167 None:intergenic 10.0%
!! TGTGATAATTATTATAATAA+AGG + chr1_3:33083157-33083176 None:intergenic 10.0%
!!! ATTATATTTCTAAAATTTCA+TGG - chr1_3:33084826-33084845 Msa0114820:intron 10.0%
!!! TAGTTTCTTATATTTTTTCT+AGG + chr1_3:33082617-33082636 None:intergenic 15.0%
!! AGAGATTTCTATTATAAATA+AGG + chr1_3:33083082-33083101 None:intergenic 15.0%
!!! ATTATCACATTAATTTGTAT+TGG - chr1_3:33083168-33083187 Msa0114820:three_prime_UTR 15.0%
!!! TTATCACATTAATTTGTATT+GGG - chr1_3:33083169-33083188 Msa0114820:three_prime_UTR 15.0%
!!! TTGTTTTATATGATAAACAT+TGG - chr1_3:33084198-33084217 Msa0114820:CDS 15.0%
!!! TATTTTCAATTAGAAGATTA+AGG + chr1_3:33084495-33084514 None:intergenic 15.0%
!! AAGTCATACAAAAATAATAA+TGG + chr1_3:33084745-33084764 None:intergenic 15.0%
!!! AATTTTAGAAATATAATCAG+TGG + chr1_3:33084823-33084842 None:intergenic 15.0%
!!! AACTTGTTATTAACTTAATT+GGG - chr1_3:33085163-33085182 Msa0114820:CDS 15.0%
!!! TCTTATATTCTAAGTTATTT+TGG - chr1_3:33085564-33085583 Msa0114820:CDS 15.0%
!! AATAAATATGGAAATAAACA+TGG + chr1_3:33086129-33086148 None:intergenic 15.0%
!!! ATTTTTAGTTTGAAAGTTAT+AGG - chr1_3:33087760-33087779 Msa0114820:CDS 15.0%
!! AAAAAGAAAAAGATAACGAT+CGG - chr1_3:33081903-33081922 Msa0114820:three_prime_UTR 20.0%
!!! GGTAATTTTTCTTTTTTTTG+CGG - chr1_3:33082222-33082241 Msa0114820:three_prime_UTR 20.0%
!! CATTCATTAAATATTGTATG+TGG - chr1_3:33082361-33082380 Msa0114820:three_prime_UTR 20.0%
!!! TTTTTTCTTATAATAGTGAC+CGG - chr1_3:33082436-33082455 Msa0114820:three_prime_UTR 20.0%
!! TACGAAAATTAGATAAAGAT+AGG - chr1_3:33082474-33082493 Msa0114820:intron 20.0%
!! GTATTTAGATATTAATGAGT+TGG - chr1_3:33082793-33082812 Msa0114820:intron 20.0%
!! AATATTTCGTATCTATAACA+TGG - chr1_3:33083031-33083050 Msa0114820:intron 20.0%
!! TTGAAAATAGAAAATCAGTA+AGG - chr1_3:33083207-33083226 Msa0114820:three_prime_UTR 20.0%
!! TGAAAATAGAAAATCAGTAA+GGG - chr1_3:33083208-33083227 Msa0114820:three_prime_UTR 20.0%
!! ATATCAAATAAAGCTGAATT+TGG - chr1_3:33083247-33083266 Msa0114820:three_prime_UTR 20.0%
!!! ATGACTTTTGCTTATAAATA+AGG - chr1_3:33083305-33083324 Msa0114820:three_prime_UTR 20.0%
!!! ATTTGTTTTAAGAGAGATAA+GGG - chr1_3:33083350-33083369 Msa0114820:three_prime_UTR 20.0%
!!! AATGTTTTTTGTTTTGTTGA+GGG + chr1_3:33083986-33084005 None:intergenic 20.0%
!!! AAATGTTTTTTGTTTTGTTG+AGG + chr1_3:33083987-33084006 None:intergenic 20.0%
!!! CACTTTTAAACAATTTTCTT+GGG + chr1_3:33084284-33084303 None:intergenic 20.0%
!!! TCACTTTTAAACAATTTTCT+TGG + chr1_3:33084285-33084304 None:intergenic 20.0%
!! AGAAAATTGTTTAAAAGTGA+TGG - chr1_3:33084285-33084304 Msa0114820:CDS 20.0%
!!! ATATGAACAATAACTTTTCA+GGG + chr1_3:33085133-33085152 None:intergenic 20.0%
!! CAATTAAGTTAATAACAAGT+TGG + chr1_3:33085164-33085183 None:intergenic 20.0%
!!! CAACTTGTTATTAACTTAAT+TGG - chr1_3:33085162-33085181 Msa0114820:CDS 20.0%
!!! CTAAGTTATTTTGGATTTTA+TGG - chr1_3:33085573-33085592 Msa0114820:CDS 20.0%
!! ATTGTTGGAATATGTATATT+TGG - chr1_3:33085851-33085870 Msa0114820:CDS 20.0%
!! TTGTTGGAATATGTATATTT+GGG - chr1_3:33085852-33085871 Msa0114820:CDS 20.0%
!! TATATGGAAGGAAATAAATA+TGG + chr1_3:33086141-33086160 None:intergenic 20.0%
!! TCTGTAAAATATCAATTTCA+AGG + chr1_3:33086176-33086195 None:intergenic 20.0%
!!! CAACTCTTATTTGAAAAATA+CGG + chr1_3:33086205-33086224 None:intergenic 20.0%
!! AACATTTGTTTAAGTAGTTT+AGG - chr1_3:33086400-33086419 Msa0114820:intron 20.0%
!!! AGAATTTAATTTGAACATCT+AGG + chr1_3:33086695-33086714 None:intergenic 20.0%
!! CAAACAATACTTTATCAAAT+AGG + chr1_3:33086869-33086888 None:intergenic 20.0%
!!! CTATTTGATAAAGTATTGTT+TGG - chr1_3:33086867-33086886 Msa0114820:intron 20.0%
!! TTCAAACTTAATCTAAGAAT+TGG - chr1_3:33086923-33086942 Msa0114820:intron 20.0%
!! ACATTAACATTTCATAAAGA+TGG + chr1_3:33086972-33086991 None:intergenic 20.0%
!!! TCTGTTAACTTTAAATTTTG+TGG - chr1_3:33087128-33087147 Msa0114820:intron 20.0%
!! GGCAATTAAAATAATCAAAA+TGG - chr1_3:33087452-33087471 Msa0114820:intron 20.0%
!!! AAAAATTGGTTGATGATTGA+TGG - chr1_3:33081766-33081785 Msa0114820:three_prime_UTR 25.0%
! AAAAAAGCGAAGAATGAATT+CGG + chr1_3:33082016-33082035 None:intergenic 25.0%
! TTGATGAAAAGACAAATAGA+TGG - chr1_3:33082089-33082108 Msa0114820:three_prime_UTR 25.0%
! AAGAAAAATTACCTTAACCA+TGG + chr1_3:33082215-33082234 None:intergenic 25.0%
! ATTAGTGATATATTAGTGAC+CGG + chr1_3:33082315-33082334 None:intergenic 25.0%
!! TAATGAGTTGGATACAAATA+TGG - chr1_3:33082805-33082824 Msa0114820:intron 25.0%
! AATTATTTGGCACACAAAAA+AGG + chr1_3:33082972-33082991 None:intergenic 25.0%
!!! TTTTTTGTGTGCCAAATAAT+TGG - chr1_3:33082971-33082990 Msa0114820:intron 25.0%
!! AAAGATTGGTTATTGCTAAA+CGG - chr1_3:33083003-33083022 Msa0114820:intron 25.0%
! TCTATTATAAATAAGGTCGA+AGG + chr1_3:33083075-33083094 None:intergenic 25.0%
! GAAAATAGAAAATCAGTAAG+GGG - chr1_3:33083209-33083228 Msa0114820:three_prime_UTR 25.0%
!!! CATTTGTTTTAAGAGAGATA+AGG - chr1_3:33083349-33083368 Msa0114820:three_prime_UTR 25.0%
!!! TTTGTTTTAAGAGAGATAAG+GGG - chr1_3:33083351-33083370 Msa0114820:three_prime_UTR 25.0%
! TATATTTCGAACAATGCAAA+TGG + chr1_3:33083743-33083762 None:intergenic 25.0%
!! ACAGAAGATTGAATATTTTG+TGG - chr1_3:33083777-33083796 Msa0114820:CDS 25.0%
!!! ATGTTTTTTGTTTTGTTGAG+GGG + chr1_3:33083985-33084004 None:intergenic 25.0%
! GACAAAAGTAAATGTTTGTT+AGG + chr1_3:33084250-33084269 None:intergenic 25.0%
! TTTCAATTAGAAGATTAAGG+AGG + chr1_3:33084492-33084511 None:intergenic 25.0%
! TTAGAAATATAATCAGTGGT+AGG + chr1_3:33084819-33084838 None:intergenic 25.0%
! TGTGAGGAAATATAATTACA+TGG + chr1_3:33085024-33085043 None:intergenic 25.0%
! TGTATTATCTGATATACTGA+AGG - chr1_3:33085053-33085072 Msa0114820:CDS 25.0%
! CAGGGATAATATATAATCTA+GGG + chr1_3:33085115-33085134 None:intergenic 25.0%
! TCAGGGATAATATATAATCT+AGG + chr1_3:33085116-33085135 None:intergenic 25.0%
!! CATATGAACAATAACTTTTC+AGG + chr1_3:33085134-33085153 None:intergenic 25.0%
! GTAATGATATTCATGTAGAA+AGG - chr1_3:33085280-33085299 Msa0114820:CDS 25.0%
!!! TCCAATGTTGTCTTATTTTA+TGG - chr1_3:33085381-33085400 Msa0114820:intron 25.0%
! ACCATAAAATAAGACAACAT+TGG + chr1_3:33085385-33085404 None:intergenic 25.0%
!!! TTGTCTTATTTTATGGTATG+TGG - chr1_3:33085388-33085407 Msa0114820:intron 25.0%
!!! TGTCTTATTTTATGGTATGT+GGG - chr1_3:33085389-33085408 Msa0114820:intron 25.0%
!!! TCCTTTTGGAAAATTCATTT+GGG + chr1_3:33085602-33085621 None:intergenic 25.0%
!!! ATCCTTTTGGAAAATTCATT+TGG + chr1_3:33085603-33085622 None:intergenic 25.0%
!! AATGAATTTTCCAAAAGGAT+TGG - chr1_3:33085603-33085622 Msa0114820:intron 25.0%
!! ATGAATTTTCCAAAAGGATT+GGG - chr1_3:33085604-33085623 Msa0114820:intron 25.0%
!!! GAAATAACAGATTGTTTTGT+TGG - chr1_3:33085771-33085790 Msa0114820:CDS 25.0%
! TATAGATATCTAGAAGAATC+TGG + chr1_3:33086067-33086086 None:intergenic 25.0%
! AGATTCTTCTAGATATCTAT+AGG - chr1_3:33086066-33086085 Msa0114820:CDS 25.0%
! CTATAAACTGGATAATAGAA+TGG + chr1_3:33086284-33086303 None:intergenic 25.0%
! AAAATGACAAGTCAATAAAC+TGG + chr1_3:33086328-33086347 None:intergenic 25.0%
!!! AGTTTATTGACTTGTCATTT+TGG - chr1_3:33086327-33086346 Msa0114820:intron 25.0%
!!! GTTTATTGACTTGTCATTTT+GGG - chr1_3:33086328-33086347 Msa0114820:intron 25.0%
! TAATGGAAGCTAAATTGAAT+TGG - chr1_3:33086467-33086486 Msa0114820:intron 25.0%
! CTCATGAAAATTTAAGAACA+TGG - chr1_3:33086737-33086756 Msa0114820:intron 25.0%
! TTTATATCTTATCTTGACCA+GGG - chr1_3:33086784-33086803 Msa0114820:intron 25.0%
! CATCAAAAATCAAAAGCAAA+GGG + chr1_3:33087011-33087030 None:intergenic 25.0%
! TCATCAAAAATCAAAAGCAA+AGG + chr1_3:33087012-33087031 None:intergenic 25.0%
!! ATTTTCAACCAAATTCGTTT+GGG - chr1_3:33087041-33087060 Msa0114820:intron 25.0%
! ATCCTTAAAAATTAGAAGCA+AGG - chr1_3:33087066-33087085 Msa0114820:intron 25.0%
!! ATCCTTGCTTCTAATTTTTA+AGG + chr1_3:33087071-33087090 None:intergenic 25.0%
! GGACAATTTCTCATAAAAAA+TGG + chr1_3:33087097-33087116 None:intergenic 25.0%
! GACTGCAATAATAAATAACA+AGG + chr1_3:33087185-33087204 None:intergenic 25.0%
!!! TTATAAAGGTTGATATTAGC+TGG - chr1_3:33087214-33087233 Msa0114820:intron 25.0%
!!! TATAAAGGTTGATATTAGCT+GGG - chr1_3:33087215-33087234 Msa0114820:intron 25.0%
!! CATTGATTAAACTAGTACAT+TGG - chr1_3:33087241-33087260 Msa0114820:intron 25.0%
!! ATACTCTTCAAGATGTTTTA+CGG - chr1_3:33087652-33087671 Msa0114820:intron 25.0%
! TTCGAAAAACTTCATATTCT+AGG + chr1_3:33087790-33087809 None:intergenic 25.0%
! GCTATGTTACAGTTTATATT+AGG - chr1_3:33087834-33087853 Msa0114820:five_prime_UTR 25.0%
TACAGTTATGATTCATTCGA+CGG - chr1_3:33081859-33081878 Msa0114820:three_prime_UTR 30.0%
AAAAGACAAATAGATGGAAG+TGG - chr1_3:33082095-33082114 Msa0114820:three_prime_UTR 30.0%
!! CAGTTATTTTATTCTCGTGT+TGG + chr1_3:33082255-33082274 None:intergenic 30.0%
! ATGTTGTGGATTTTATCGTA+AGG - chr1_3:33082543-33082562 Msa0114820:intron 30.0%
ATAGTTCAAAGTTCAAACGA+TGG + chr1_3:33082850-33082869 None:intergenic 30.0%
CAATAACCAATCTTTGTTAG+GGG + chr1_3:33082998-33083017 None:intergenic 30.0%
GCAATAACCAATCTTTGTTA+GGG + chr1_3:33082999-33083018 None:intergenic 30.0%
AGCAATAACCAATCTTTGTT+AGG + chr1_3:33083000-33083019 None:intergenic 30.0%
CAAAAGTCATCCTAATTTCA+TGG + chr1_3:33083295-33083314 None:intergenic 30.0%
TTGCTTATAAATAAGGCTAG+AGG - chr1_3:33083312-33083331 Msa0114820:three_prime_UTR 30.0%
TGCTTATAAATAAGGCTAGA+GGG - chr1_3:33083313-33083332 Msa0114820:three_prime_UTR 30.0%
!!! TTGTTTTAAGAGAGATAAGG+GGG - chr1_3:33083352-33083371 Msa0114820:three_prime_UTR 30.0%
GGGCTTATTATAGTTGAATT+TGG - chr1_3:33083373-33083392 Msa0114820:three_prime_UTR 30.0%
AATATGTGCTTTACTTCATC+AGG - chr1_3:33083432-33083451 Msa0114820:three_prime_UTR 30.0%
!!! ATATTTTGGGAGCATTGTTA+TGG - chr1_3:33083467-33083486 Msa0114820:three_prime_UTR 30.0%
! GATTGAATATTTTGTGGAGA+TGG - chr1_3:33083783-33083802 Msa0114820:CDS 30.0%
GTTCAACATCATTACAAACA+GGG + chr1_3:33083855-33083874 None:intergenic 30.0%
AGTTCAACATCATTACAAAC+AGG + chr1_3:33083856-33083875 None:intergenic 30.0%
TAGTCTAAGTAATTGACACA+AGG + chr1_3:33084010-33084029 None:intergenic 30.0%
ATTTCTACAAATGATTGTGC+AGG - chr1_3:33084100-33084119 Msa0114820:CDS 30.0%
! TTGTTGATGCCATAATTTGT+GGG - chr1_3:33084326-33084345 Msa0114820:CDS 30.0%
! ATAGTTGTTCTCAATCCTTT+TGG + chr1_3:33084374-33084393 None:intergenic 30.0%
AAAAGGATTGAGAACAACTA+TGG - chr1_3:33084373-33084392 Msa0114820:CDS 30.0%
! ATGGATATTTGTTTCTCCAA+TGG + chr1_3:33084547-33084566 None:intergenic 30.0%
ATTGGAGAAACAAATATCCA+TGG - chr1_3:33084546-33084565 Msa0114820:CDS 30.0%
GAAACAAATATCCATGGTAA+AGG - chr1_3:33084552-33084571 Msa0114820:CDS 30.0%
AGAAATTTGCACAACATCAA+TGG + chr1_3:33084876-33084895 None:intergenic 30.0%
TTGTGGATGCAATTCAAAAA+TGG - chr1_3:33084917-33084936 Msa0114820:intron 30.0%
!! CAGCATCATTTTGATATATC+CGG + chr1_3:33084945-33084964 None:intergenic 30.0%
! GATGCTGATGATAATTTTCA+AGG - chr1_3:33084958-33084977 Msa0114820:CDS 30.0%
ATGATACATCTTTGATACTG+TGG + chr1_3:33085210-33085229 None:intergenic 30.0%
!! GTTAAAGACTGTTTTTCTTC+TGG - chr1_3:33085242-33085261 Msa0114820:intron 30.0%
TGCAAACTGTATTCCATAAA+AGG - chr1_3:33085322-33085341 Msa0114820:CDS 30.0%
!!! GTCTTATTTTATGGTATGTG+GGG - chr1_3:33085390-33085409 Msa0114820:intron 30.0%
! TCCCAAATGAATTTTCCAAA+AGG - chr1_3:33085598-33085617 Msa0114820:CDS 30.0%
!! TGAAGCATTGATGTTATTGT+TGG - chr1_3:33085836-33085855 Msa0114820:CDS 30.0%
TTGGAATATGTATATTTGGG+AGG - chr1_3:33085855-33085874 Msa0114820:CDS 30.0%
GATGAAGTAAGATTAAAGCT+GGG + chr1_3:33085999-33086018 None:intergenic 30.0%
AGATGAAGTAAGATTAAAGC+TGG + chr1_3:33086000-33086019 None:intergenic 30.0%
!!! ACAGCTGTTTTTCTATAAAC+TGG + chr1_3:33086296-33086315 None:intergenic 30.0%
!! GTCATTTTGGGTAAAGTTAA+CGG - chr1_3:33086340-33086359 Msa0114820:intron 30.0%
! TGTTTTCAGAGATGTCATAA+TGG - chr1_3:33086450-33086469 Msa0114820:intron 30.0%
TCTGGATGTGATTATTTACA+GGG - chr1_3:33086562-33086581 Msa0114820:intron 30.0%
TCTTTGCCTATTATTTAAGC+TGG - chr1_3:33086712-33086731 Msa0114820:intron 30.0%
TGAGTTCCAGCTTAAATAAT+AGG + chr1_3:33086721-33086740 None:intergenic 30.0%
GTTTATATCTTATCTTGACC+AGG - chr1_3:33086783-33086802 Msa0114820:intron 30.0%
AGTATTGTTTGGAAACTCAT+TGG - chr1_3:33086878-33086897 Msa0114820:intron 30.0%
! ACATTTCATAAAGATGGACT+TGG + chr1_3:33086966-33086985 None:intergenic 30.0%
! TTGATTTTTGATGAGAAGCA+AGG - chr1_3:33087018-33087037 Msa0114820:intron 30.0%
! GATTTTCAACCAAATTCGTT+TGG - chr1_3:33087040-33087059 Msa0114820:intron 30.0%
CAGTCATTCACAAGTTATAA+AGG - chr1_3:33087200-33087219 Msa0114820:intron 30.0%
TCCTTCATATAGGCAATTAA+GGG - chr1_3:33087527-33087546 Msa0114820:CDS 30.0%
CAATAGAAGCGGAATAAATA+AGG + chr1_3:33087593-33087612 None:intergenic 30.0%
ATGGTTAAGTTCAATAGAAG+CGG + chr1_3:33087604-33087623 None:intergenic 30.0%
TCTATTGAACTTAACCATGA+AGG - chr1_3:33087606-33087625 Msa0114820:intron 30.0%
! GGTGTGTTGTAAAATTTTGT+AGG - chr1_3:33087688-33087707 Msa0114820:CDS 30.0%
!!! AATCCTTATTTTGAGCTGTT+AGG - chr1_3:33087812-33087831 Msa0114820:five_prime_UTR 30.0%
CAAGAAAAGCAGCAATTGAT+CGG + chr1_3:33082156-33082175 None:intergenic 35.0%
TTTCTTATAATAGTGACCGG+AGG - chr1_3:33082439-33082458 Msa0114820:three_prime_UTR 35.0%
TTCTTATAATAGTGACCGGA+GGG - chr1_3:33082440-33082459 Msa0114820:three_prime_UTR 35.0%
TTAGAGAAACACATCTCATG+TGG - chr1_3:33082513-33082532 Msa0114820:intron 35.0%
! TTGTGGATTTTATCGTAAGG+AGG - chr1_3:33082546-33082565 Msa0114820:intron 35.0%
! TGTGGATTTTATCGTAAGGA+GGG - chr1_3:33082547-33082566 Msa0114820:intron 35.0%
TTTCTCTTACAAACCCACTT+GGG + chr1_3:33082763-33082782 None:intergenic 35.0%
ATGCTTTATCCCACTAAACA+GGG + chr1_3:33082881-33082900 None:intergenic 35.0%
! CATGGTTGTTGTTATTGCTT+AGG - chr1_3:33082898-33082917 Msa0114820:intron 35.0%
TTGTTAGGGGTCCAATTATT+TGG + chr1_3:33082985-33083004 None:intergenic 35.0%
! GTGACTTTTGCTTATGTTTG+AGG - chr1_3:33083269-33083288 Msa0114820:three_prime_UTR 35.0%
! ATGTTTGAGGCCATGAAATT+AGG - chr1_3:33083282-33083301 Msa0114820:three_prime_UTR 35.0%
!!! TGTTTTAAGAGAGATAAGGG+GGG - chr1_3:33083353-33083372 Msa0114820:three_prime_UTR 35.0%
! ATAGTTGAATTTGGCCTTCT+TGG - chr1_3:33083382-33083401 Msa0114820:three_prime_UTR 35.0%
ATAGATTACATCAGCCAAGA+AGG + chr1_3:33083399-33083418 None:intergenic 35.0%
! GAATCTGCTGCTGATATTTT+GGG - chr1_3:33083454-33083473 Msa0114820:three_prime_UTR 35.0%
TTTGATGCCATGCTTAACAA+GGG + chr1_3:33083514-33083533 None:intergenic 35.0%
ATTTGATGCCATGCTTAACA+AGG + chr1_3:33083515-33083534 None:intergenic 35.0%
TAGACAAGATCCAACAAACA+CGG + chr1_3:33083583-33083602 None:intergenic 35.0%
AAATTCAAAGCAGTAGCACA+AGG + chr1_3:33083652-33083671 None:intergenic 35.0%
! TTGTGCTACTGCTTTGAATT+TGG - chr1_3:33083651-33083670 Msa0114820:CDS 35.0%
GTTCGAAATATAAAAGACCG+CGG - chr1_3:33083751-33083770 Msa0114820:CDS 35.0%
! TTTTGAGCACAATTCTGTTG+AGG - chr1_3:33083812-33083831 Msa0114820:CDS 35.0%
CTAAAGCTGTACACATCTTT+AGG - chr1_3:33083934-33083953 Msa0114820:CDS 35.0%
!!! TTTTTGTTTTGTTGAGGGGA+AGG + chr1_3:33083981-33084000 None:intergenic 35.0%
TGTAGCACAAAAGCTTATAG+AGG - chr1_3:33084067-33084086 Msa0114820:CDS 35.0%
AATCTAACCCTCATGATGTT+CGG - chr1_3:33084132-33084151 Msa0114820:CDS 35.0%
!! TTAAAAGTGATGGATTCGTG+TGG - chr1_3:33084295-33084314 Msa0114820:CDS 35.0%
CTTGTTGATGCCATAATTTG+TGG - chr1_3:33084325-33084344 Msa0114820:CDS 35.0%
!!! TTCTCAATCCTTTTGGAACA+CGG + chr1_3:33084367-33084386 None:intergenic 35.0%
! CAACTATGGTTCTGTATTAG+TGG - chr1_3:33084387-33084406 Msa0114820:CDS 35.0%
! ATTAGTGGAAGCATGTAAGT+TGG - chr1_3:33084402-33084421 Msa0114820:CDS 35.0%
! GCAATCATCATATCAGGTTT+TGG - chr1_3:33084446-33084465 Msa0114820:CDS 35.0%
!!! CATATCAGGTTTTGGAAACA+AGG - chr1_3:33084454-33084473 Msa0114820:CDS 35.0%
GCAAAACAATTTCGGAAGAT+TGG + chr1_3:33084525-33084544 None:intergenic 35.0%
!! TTCCGAAATTGTTTTGCCAT+TGG - chr1_3:33084528-33084547 Msa0114820:CDS 35.0%
CTCCAATGGCAAAACAATTT+CGG + chr1_3:33084533-33084552 None:intergenic 35.0%
ACAAATATCCATGGTAAAGG+AGG - chr1_3:33084555-33084574 Msa0114820:CDS 35.0%
CAAATATCCATGGTAAAGGA+GGG - chr1_3:33084556-33084575 Msa0114820:CDS 35.0%
TCAATTATCATGTTGCTCTG+AGG - chr1_3:33084587-33084606 Msa0114820:CDS 35.0%
GATATGAAGTTCACTCTCAT+GGG + chr1_3:33084683-33084702 None:intergenic 35.0%
TGATATGAAGTTCACTCTCA+TGG + chr1_3:33084684-33084703 None:intergenic 35.0%
CTTCAAGTGTGTGTATACAT+TGG - chr1_3:33084762-33084781 Msa0114820:intron 35.0%
AAATGTGAAGCTGCAGAAAA+AGG + chr1_3:33084899-33084918 None:intergenic 35.0%
ATGCAATTCAAAAATGGTGC+CGG - chr1_3:33084923-33084942 Msa0114820:intron 35.0%
ATTAAAACAGCCCTTGATAC+TGG + chr1_3:33084988-33085007 None:intergenic 35.0%
TAATACAGATCTAGCATGTG+AGG + chr1_3:33085040-33085059 None:intergenic 35.0%
TCTGATATACTGAAGGTCAT+AGG - chr1_3:33085060-33085079 Msa0114820:CDS 35.0%
AGATGTATCATAGAAAGCAG+AGG - chr1_3:33085219-33085238 Msa0114820:intron 35.0%
GATGTATCATAGAAAGCAGA+GGG - chr1_3:33085220-33085239 Msa0114820:intron 35.0%
TGGAATACAGTTTGCAAATG+AGG + chr1_3:33085318-33085337 None:intergenic 35.0%
GCAAAGGAATGTCTAGTAAA+AGG + chr1_3:33085443-33085462 None:intergenic 35.0%
TCCTTTGCAATTTAGTAGAG+AGG - chr1_3:33085455-33085474 Msa0114820:intron 35.0%
ACCTCTCTACTAAATTGCAA+AGG + chr1_3:33085459-33085478 None:intergenic 35.0%
GATTGGGAACTCTCTTAATA+AGG - chr1_3:33085620-33085639 Msa0114820:intron 35.0%
AATAACACCATGAACACTCA+CGG + chr1_3:33085688-33085707 None:intergenic 35.0%
GTAAGATTAAAGCTGGGAAA+AGG + chr1_3:33085993-33086012 None:intergenic 35.0%
!!! GCTGGAAGTTATTTTTCGTA+TGG - chr1_3:33086029-33086048 Msa0114820:CDS 35.0%
AAGCTACTCAAGTATATGGA+AGG + chr1_3:33086153-33086172 None:intergenic 35.0%
AAGGAAGCTACTCAAGTATA+TGG + chr1_3:33086157-33086176 None:intergenic 35.0%
ATAAGAGTTGCGTTTCTGAA+AGG - chr1_3:33086215-33086234 Msa0114820:intron 35.0%
TCTGAAAGGACTGTTAAACT+TGG - chr1_3:33086229-33086248 Msa0114820:intron 35.0%
!! GCTAAATTGAATTGGCTTGT+TGG - chr1_3:33086475-33086494 Msa0114820:intron 35.0%
!! AATTGAATTGGCTTGTTGGA+TGG - chr1_3:33086479-33086498 Msa0114820:intron 35.0%
!! ATTGAATTGGCTTGTTGGAT+GGG - chr1_3:33086480-33086499 Msa0114820:intron 35.0%
ACTTTGTGAACATGCATATG+TGG + chr1_3:33086532-33086551 None:intergenic 35.0%
CACAAAGTTATATTGCAGTC+TGG - chr1_3:33086544-33086563 Msa0114820:intron 35.0%
GTCTGGATGTGATTATTTAC+AGG - chr1_3:33086561-33086580 Msa0114820:intron 35.0%
ATCTTCATCACTCGTTTATC+AGG + chr1_3:33086668-33086687 None:intergenic 35.0%
AAGGATATCCCAAACGAATT+TGG + chr1_3:33087052-33087071 None:intergenic 35.0%
ATTCAATTTGCAGCCATATG+TGG - chr1_3:33087335-33087354 Msa0114820:intron 35.0%
!!! CTGGATTTTGGAAAGTATTC+AGG - chr1_3:33087380-33087399 Msa0114820:intron 35.0%
TCTTGATTCTTCTAAGCAGT+TGG - chr1_3:33087431-33087450 Msa0114820:intron 35.0%
CTCCTTCATATAGGCAATTA+AGG - chr1_3:33087526-33087545 Msa0114820:CDS 35.0%
TCCCTTAATTGCCTATATGA+AGG + chr1_3:33087531-33087550 None:intergenic 35.0%
!! TAAAGCGTTTTTCACCTTCA+TGG + chr1_3:33087623-33087642 None:intergenic 35.0%
ATGAAGGTGAAAAACGCTTT+AGG - chr1_3:33087622-33087641 Msa0114820:intron 35.0%
TAGCCTAACAGCTCAAAATA+AGG + chr1_3:33087818-33087837 None:intergenic 35.0%
GGTAACTGTTACAGTTAGTT+AGG - chr1_3:33087855-33087874 Msa0114820:five_prime_UTR 35.0%
GATTATCAACTCTCTCTCGA+CGG - chr1_3:33081825-33081844 Msa0114820:three_prime_UTR 40.0%
GGTTTAAGGAATGGAGAAGA+CGG + chr1_3:33081961-33081980 None:intergenic 40.0%
CTTCTCCATTCCTTAAACCT+TGG - chr1_3:33081962-33081981 Msa0114820:three_prime_UTR 40.0%
GTGATATATTAGTGACCGGA+GGG + chr1_3:33082311-33082330 None:intergenic 40.0%
AGTGATATATTAGTGACCGG+AGG + chr1_3:33082312-33082331 None:intergenic 40.0%
TAGCTCAGTGAAATTAGCAC+TGG - chr1_3:33082670-33082689 Msa0114820:intron 40.0%
AGCTCAGTGAAATTAGCACT+GGG - chr1_3:33082671-33082690 Msa0114820:intron 40.0%
GTTTCTCTTACAAACCCACT+TGG + chr1_3:33082764-33082783 None:intergenic 40.0%
CATGCTTTATCCCACTAAAC+AGG + chr1_3:33082882-33082901 None:intergenic 40.0%
CTGTTTAGTGGGATAAAGCA+TGG - chr1_3:33082880-33082899 Msa0114820:intron 40.0%
!! TTGCTCCCTAGTTTTTGCTA+TGG - chr1_3:33082923-33082942 Msa0114820:intron 40.0%
GCTCTCCATAGCAAAAACTA+GGG + chr1_3:33082931-33082950 None:intergenic 40.0%
ATTGGACCCCTAACAAAGAT+TGG - chr1_3:33082989-33083008 Msa0114820:intron 40.0%
! GATTGGTTATTGCTAAACGG+CGG - chr1_3:33083006-33083025 Msa0114820:intron 40.0%
! GGAATCTGCTGCTGATATTT+TGG - chr1_3:33083453-33083472 Msa0114820:three_prime_UTR 40.0%
AAATGAGCCCTTGTTAAGCA+TGG - chr1_3:33083504-33083523 Msa0114820:CDS 40.0%
GTTAAGCATGGCATCAAATG+TGG - chr1_3:33083516-33083535 Msa0114820:CDS 40.0%
AACAAACACGGTTGCAATAG+TGG + chr1_3:33083571-33083590 None:intergenic 40.0%
ACTATTGCAACCGTGTTTGT+TGG - chr1_3:33083570-33083589 Msa0114820:CDS 40.0%
TGCAACTTCTACTTGATGTG+AGG + chr1_3:33083626-33083645 None:intergenic 40.0%
TCTGAGTGCTACAAGTGAAA+AGG - chr1_3:33083684-33083703 Msa0114820:CDS 40.0%
GCACAAAAGCTTATAGAGGA+TGG - chr1_3:33084071-33084090 Msa0114820:CDS 40.0%
CTCTCTCATCCCACAAATTA+TGG + chr1_3:33084338-33084357 None:intergenic 40.0%
! AGTTGGCTCAAATTACTCGT+TGG - chr1_3:33084419-33084438 Msa0114820:CDS 40.0%
! GTTGGCTCAAATTACTCGTT+GGG - chr1_3:33084420-33084439 Msa0114820:CDS 40.0%
TCTCATGGGTATAACTACAG+GGG + chr1_3:33084669-33084688 None:intergenic 40.0%
CTCTCATGGGTATAACTACA+GGG + chr1_3:33084670-33084689 None:intergenic 40.0%
ACTCTCATGGGTATAACTAC+AGG + chr1_3:33084671-33084690 None:intergenic 40.0%
! ACTTACTGATTACGTGTGCA+TGG - chr1_3:33084704-33084723 Msa0114820:CDS 40.0%
TCAGTGGTAGGAAGAAACTA+TGG + chr1_3:33084807-33084826 None:intergenic 40.0%
GCACAACATCAATGGAATGA+AGG + chr1_3:33084868-33084887 None:intergenic 40.0%
TTTCTGCAGCTTCACATTTG+TGG - chr1_3:33084900-33084919 Msa0114820:intron 40.0%
TTCAAGGTGAACCAGTATCA+AGG - chr1_3:33084974-33084993 Msa0114820:CDS 40.0%
TCAAGGTGAACCAGTATCAA+GGG - chr1_3:33084975-33084994 Msa0114820:CDS 40.0%
TATTCATGTAGAAAGGCCAG+AGG - chr1_3:33085287-33085306 Msa0114820:CDS 40.0%
!! TCCATAAAAGGTCTTGTTGC+TGG - chr1_3:33085334-33085353 Msa0114820:CDS 40.0%
! TCCAGCAACAAGACCTTTTA+TGG + chr1_3:33085338-33085357 None:intergenic 40.0%
!! AAAAGGTCTTGTTGCTGGAT+TGG - chr1_3:33085339-33085358 Msa0114820:CDS 40.0%
!! TCTTGTTGCTGGATTGGTAA+AGG - chr1_3:33085345-33085364 Msa0114820:CDS 40.0%
GAAACATACCATTTCACTCC+AGG + chr1_3:33085546-33085565 None:intergenic 40.0%
! AAGAGAGTTCCCAATCCTTT+TGG + chr1_3:33085616-33085635 None:intergenic 40.0%
TTGCGACTCATTGTAGCAAA+TGG - chr1_3:33085657-33085676 Msa0114820:intron 40.0%
TGCGACTCATTGTAGCAAAT+GGG - chr1_3:33085658-33085677 Msa0114820:intron 40.0%
CTACTAGATAGCACTTCTGA+AGG + chr1_3:33085738-33085757 None:intergenic 40.0%
TTTGCAGACAATCTCCAAAG+TGG - chr1_3:33085961-33085980 Msa0114820:intron 40.0%
TTGCAGACAATCTCCAAAGT+GGG - chr1_3:33085962-33085981 Msa0114820:intron 40.0%
ACTTCATCTCTTGATTCAGC+TGG - chr1_3:33086011-33086030 Msa0114820:CDS 40.0%
TGAACATGCATATGTGGTAC+TGG + chr1_3:33086526-33086545 None:intergenic 40.0%
! TTACAGGGTTTGTTCAGATC+AGG - chr1_3:33086577-33086596 Msa0114820:intron 40.0%
ACCTGTTCTGTGGTTGATTA+AGG - chr1_3:33086815-33086834 Msa0114820:intron 40.0%
AGTTAACAGAGCACAAGAGA+TGG + chr1_3:33087118-33087137 None:intergenic 40.0%
TAACCCACAAACAACCAGAA+GGG + chr1_3:33087293-33087312 None:intergenic 40.0%
TTAACCCACAAACAACCAGA+AGG + chr1_3:33087294-33087313 None:intergenic 40.0%
! TGGTTGTTTGTGGGTTAACA+TGG - chr1_3:33087296-33087315 Msa0114820:intron 40.0%
! AAAGTATTCAGGAAGCTTGC+TGG - chr1_3:33087391-33087410 Msa0114820:intron 40.0%
CTTCCACAAAGAGAGCTTAT+AGG + chr1_3:33087478-33087497 None:intergenic 40.0%
TAAGCTCTCTTTGTGGAAGT+TGG - chr1_3:33087479-33087498 Msa0114820:intron 40.0%
GTCTCATAGCTCCTTCATAT+AGG - chr1_3:33087517-33087536 Msa0114820:intron 40.0%
! TTTTACGGTGCAGAAGATTC+AGG - chr1_3:33087667-33087686 Msa0114820:intron 40.0%
GATTCATTCGACGGTGAAAG+CGG - chr1_3:33081868-33081887 Msa0114820:three_prime_UTR 45.0%
! TGGTGCCAAGGTTTAAGGAA+TGG + chr1_3:33081970-33081989 None:intergenic 45.0%
ATTCCTTAAACCTTGGCACC+AGG - chr1_3:33081969-33081988 Msa0114820:three_prime_UTR 45.0%
CTTAACCATGGTATGACGTG+TGG + chr1_3:33082203-33082222 None:intergenic 45.0%
CACACGTCATACCATGGTTA+AGG - chr1_3:33082201-33082220 Msa0114820:three_prime_UTR 45.0%
ATGTTGTGTTGTACACCCTC+CGG - chr1_3:33082293-33082312 Msa0114820:three_prime_UTR 45.0%
GGTCAAATCGCTAGAAGTAG+AGG - chr1_3:33082587-33082606 Msa0114820:intron 45.0%
GAATCGAACTTGAGACCATC+AGG - chr1_3:33082695-33082714 Msa0114820:intron 45.0%
TCTTACAAACCCACTTGGGT+TGG + chr1_3:33082759-33082778 None:intergenic 45.0%
ATATAGCCAGCCCTGTTTAG+TGG - chr1_3:33082868-33082887 Msa0114820:intron 45.0%
TATAGCCAGCCCTGTTTAGT+GGG - chr1_3:33082869-33082888 Msa0114820:intron 45.0%
TTTATCCCACTAAACAGGGC+TGG + chr1_3:33082877-33082896 None:intergenic 45.0%
GGCTCTCCATAGCAAAAACT+AGG + chr1_3:33082932-33082951 None:intergenic 45.0%
! TTTGCTATGGAGAGCCTAAC+TGG - chr1_3:33082936-33082955 Msa0114820:intron 45.0%
TTGCTATGGAGAGCCTAACT+GGG - chr1_3:33082937-33082956 Msa0114820:intron 45.0%
TACTTGATGTGAGGACAGCA+AGG + chr1_3:33083617-33083636 None:intergenic 45.0%
ATTCAATCTTCTGTGCACCG+CGG + chr1_3:33083771-33083790 None:intergenic 45.0%
TGAGCACAATTCTGTTGAGG+TGG - chr1_3:33083815-33083834 Msa0114820:CDS 45.0%
CAAACAGGGAACCTAGATGA+AGG + chr1_3:33083841-33083860 None:intergenic 45.0%
GTTGAGGGGAAGGTAAAAGA+TGG + chr1_3:33083971-33083990 None:intergenic 45.0%
ACAAATGATTGTGCAGGCGA+TGG - chr1_3:33084106-33084125 Msa0114820:CDS 45.0%
CAAATGATTGTGCAGGCGAT+GGG - chr1_3:33084107-33084126 Msa0114820:CDS 45.0%
CCTCTATCCGAACATCATGA+GGG + chr1_3:33084142-33084161 None:intergenic 45.0%
CCTCATGATGTTCGGATAGA+GGG - chr1_3:33084140-33084159 Msa0114820:CDS 45.0%
CTCATGATGTTCGGATAGAG+GGG - chr1_3:33084141-33084160 Msa0114820:CDS 45.0%
ATGTTCGGATAGAGGGGTTT+CGG - chr1_3:33084147-33084166 Msa0114820:CDS 45.0%
! TCGGCTTGCTCAATGTCTAT+TGG - chr1_3:33084166-33084185 Msa0114820:CDS 45.0%
ATTTGTGGGATGAGAGAGAC+AGG - chr1_3:33084340-33084359 Msa0114820:CDS 45.0%
TTTGTGGGATGAGAGAGACA+GGG - chr1_3:33084341-33084360 Msa0114820:CDS 45.0%
TTTCAGTCCCTCCTTTACCA+TGG + chr1_3:33084566-33084585 None:intergenic 45.0%
!! TTGCTCTGAGGAGTTATGTG+TGG - chr1_3:33084599-33084618 Msa0114820:CDS 45.0%
!! TGCTCTGAGGAGTTATGTGT+GGG - chr1_3:33084600-33084619 Msa0114820:CDS 45.0%
AGTTATGTGTGGGACGTTCT+TGG - chr1_3:33084610-33084629 Msa0114820:CDS 45.0%
GTTATGTGTGGGACGTTCTT+GGG - chr1_3:33084611-33084630 Msa0114820:CDS 45.0%
GGGTGGCTTACAATTCATTG+TGG - chr1_3:33084631-33084650 Msa0114820:CDS 45.0%
!! CTGGATTGGTAAAGGAGACT+GGG - chr1_3:33085353-33085372 Msa0114820:CDS 45.0%
ATTGGTAAAGGAGACTGGGA+AGG - chr1_3:33085357-33085376 Msa0114820:CDS 45.0%
TTTCACTCCAGGACTGAAAG+AGG + chr1_3:33085535-33085554 None:intergenic 45.0%
CTTTCAGTCCTGGAGTGAAA+TGG - chr1_3:33085535-33085554 Msa0114820:CDS 45.0%
GCGACTCATTGTAGCAAATG+GGG - chr1_3:33085659-33085678 Msa0114820:intron 45.0%
! ACTTCTGAAGGTAGAAGTGC+TGG + chr1_3:33085726-33085745 None:intergenic 45.0%
! CTGCAAAGCATTTGCAAGAG+AGG + chr1_3:33085948-33085967 None:intergenic 45.0%
TGCAGACAATCTCCAAAGTG+GGG - chr1_3:33085963-33085982 Msa0114820:intron 45.0%
TCAGATCAGGAATGCAAGAG+AGG - chr1_3:33086590-33086609 Msa0114820:intron 45.0%
AGAACAGGTTACATAGACCC+TGG + chr1_3:33086804-33086823 None:intergenic 45.0%
GGTCTATGTAACCTGTTCTG+TGG - chr1_3:33086805-33086824 Msa0114820:intron 45.0%
GCCTTAATCAACCACAGAAC+AGG + chr1_3:33086819-33086838 None:intergenic 45.0%
AGAATTGGCTGAAAGCTAGC+TGG - chr1_3:33086938-33086957 Msa0114820:intron 45.0%
AAACAACCAGAAGGGGGATT+TGG + chr1_3:33087285-33087304 None:intergenic 45.0%
AACCCACAAACAACCAGAAG+GGG + chr1_3:33087292-33087311 None:intergenic 45.0%
! AGCCATATGTGGAGCTTTGT+TGG - chr1_3:33087346-33087365 Msa0114820:intron 45.0%
AGCCAACAAAGCTCCACATA+TGG + chr1_3:33087351-33087370 None:intergenic 45.0%
!! TATGTGGAGCTTTGTTGGCT+TGG - chr1_3:33087351-33087370 Msa0114820:intron 45.0%
!! TTTGTTGGCTTGGTGAGTTC+TGG - chr1_3:33087361-33087380 Msa0114820:intron 45.0%
!!! GCTTGGTGAGTTCTGGATTT+TGG - chr1_3:33087368-33087387 Msa0114820:intron 45.0%
TGGCCTATAAGCTCTCTTTG+TGG - chr1_3:33087472-33087491 Msa0114820:intron 45.0%
TTCTGCAAAGTCCTGTCAGT+AGG - chr1_3:33087894-33087913 Msa0114820:five_prime_UTR 45.0%
! TTTTCTTGCAGCCTACTGAC+AGG + chr1_3:33087908-33087927 None:intergenic 45.0%
AGTAGGCTGCAAGAAAAGCT+TGG - chr1_3:33087911-33087930 Msa0114820:five_prime_UTR 45.0%
GTAGGCTGCAAGAAAAGCTT+GGG - chr1_3:33087912-33087931 Msa0114820:five_prime_UTR 45.0%
!! ATGATATAAAAAAAAAAAAT+TGG - chr1_3:33081752-33081771 Msa0114820:three_prime_UTR 5.0%
ATGGAGAAGACGGCGATGAA+GGG + chr1_3:33081951-33081970 None:intergenic 50.0%
AATGGAGAAGACGGCGATGA+AGG + chr1_3:33081952-33081971 None:intergenic 50.0%
! AGACCTGGTGCCAAGGTTTA+AGG + chr1_3:33081975-33081994 None:intergenic 50.0%
CGTATCACACATACACCCTC+CGG + chr1_3:33082458-33082477 None:intergenic 50.0%
CATGTGGTCTCGACATGTTG+TGG - chr1_3:33082529-33082548 Msa0114820:intron 50.0%
TCGAACTTGAGACCATCAGG+AGG - chr1_3:33082698-33082717 Msa0114820:intron 50.0%
ATAGAGTGAGCTCCTCCTGA+TGG + chr1_3:33082713-33082732 None:intergenic 50.0%
ATCAGGAGGAGCTCACTCTA+TGG - chr1_3:33082712-33082731 Msa0114820:intron 50.0%
! TGGCTGGGAGATGTTAGCTT+GGG + chr1_3:33082739-33082758 None:intergenic 50.0%
TTGGCTGGGAGATGTTAGCT+TGG + chr1_3:33082740-33082759 None:intergenic 50.0%
!! CACGGTTGCAATAGTGGACT+CGG + chr1_3:33083565-33083584 None:intergenic 50.0%
TGTTGAGGTGGCCTTCATCT+AGG - chr1_3:33083827-33083846 Msa0114820:CDS 50.0%
CCCTCATGATGTTCGGATAG+AGG - chr1_3:33084139-33084158 Msa0114820:CDS 50.0%
CCCTCTATCCGAACATCATG+AGG + chr1_3:33084143-33084162 None:intergenic 50.0%
GCTCAAATTACTCGTTGGGC+TGG - chr1_3:33084424-33084443 Msa0114820:CDS 50.0%
! GGGCTGGCAATCATCATATC+AGG - chr1_3:33084440-33084459 Msa0114820:CDS 50.0%
TGCAAATGAGGAGCAACCTC+TGG + chr1_3:33085306-33085325 None:intergenic 50.0%
!! GCTGGATTGGTAAAGGAGAC+TGG - chr1_3:33085352-33085371 Msa0114820:CDS 50.0%
AGTAGCACCTCTTTCAGTCC+TGG - chr1_3:33085525-33085544 Msa0114820:CDS 50.0%
AGGGGGATTTGGAAGCTCAT+CGG + chr1_3:33087274-33087293 None:intergenic 50.0%
! ATCCCCCTTCTGGTTGTTTG+TGG - chr1_3:33087286-33087305 Msa0114820:intron 50.0%
! TCCCCCTTCTGGTTGTTTGT+GGG - chr1_3:33087287-33087306 Msa0114820:intron 50.0%
ACCCACAAACAACCAGAAGG+GGG + chr1_3:33087291-33087310 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGACC+TGG + chr1_3:33081990-33082009 None:intergenic 55.0%
CGTAAGGAGGGTAGACCAGA+TGG - chr1_3:33082559-33082578 Msa0114820:intron 55.0%
AAGGAGGGTAGACCAGATGG+AGG - chr1_3:33082562-33082581 Msa0114820:intron 55.0%
AGGAGGGTAGACCAGATGGA+GGG - chr1_3:33082563-33082582 Msa0114820:intron 55.0%
CGATTTGACCACCCTCCATC+TGG + chr1_3:33082577-33082596 None:intergenic 55.0%
ATCTCCCAGCCAACCCAAGT+GGG - chr1_3:33082747-33082766 Msa0114820:intron 55.0%
!! CAAACCCACTTGGGTTGGCT+GGG + chr1_3:33082754-33082773 None:intergenic 55.0%
!! ACAAACCCACTTGGGTTGGC+TGG + chr1_3:33082755-33082774 None:intergenic 55.0%
TATGGAGAGCCTAACTGGGC+AGG - chr1_3:33082941-33082960 Msa0114820:intron 55.0%
ATGGAGAGCCTAACTGGGCA+GGG - chr1_3:33082942-33082961 Msa0114820:intron 55.0%
AAGGTTCTCCCTGCCCAGTT+AGG + chr1_3:33082953-33082972 None:intergenic 55.0%
AGACAGGGCCGTGTTCCAAA+AGG - chr1_3:33084356-33084375 Msa0114820:CDS 55.0%
ATGTGTGGGACGTTCTTGGG+TGG - chr1_3:33084614-33084633 Msa0114820:CDS 55.0%
GGGGATTCCGTGAGTGTTCA+TGG - chr1_3:33085678-33085697 Msa0114820:intron 55.0%
! GGAAAAGGTGTGCCCCACTT+TGG + chr1_3:33085978-33085997 None:intergenic 55.0%
GAGCTTCCAAATCCCCCTTC+TGG - chr1_3:33087276-33087295 Msa0114820:intron 55.0%
! GAGAGAGAGACCTGGTGCCA+AGG + chr1_3:33081982-33082001 None:intergenic 60.0%
TCGCGCCACACGTCATACCA+TGG - chr1_3:33082195-33082214 Msa0114820:three_prime_UTR 60.0%
AGGGTAGACCAGATGGAGGG+TGG - chr1_3:33082566-33082585 Msa0114820:intron 60.0%
CATCTCCCAGCCAACCCAAG+TGG - chr1_3:33082746-33082765 Msa0114820:intron 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 33081712 33087959 33081712 ID=Msa0114820;Name=Msa0114820
chr1_3 mRNA 33081712 33087959 33081712 ID=Msa0114820-mRNA-1;Parent=Msa0114820;Name=Msa0114820-mRNA-1;_AED=0.07;_eAED=0.07;_QI=154|0.44|0.4|1|0.55|0.4|10|1199|821
chr1_3 exon 33081712 33082468 33081712 ID=Msa0114820-mRNA-1:exon:10434;Parent=Msa0114820-mRNA-1
chr1_3 exon 33083060 33084762 33083060 ID=Msa0114820-mRNA-1:exon:10433;Parent=Msa0114820-mRNA-1
chr1_3 exon 33084955 33085097 33084955 ID=Msa0114820-mRNA-1:exon:10432;Parent=Msa0114820-mRNA-1
chr1_3 exon 33085104 33085209 33085104 ID=Msa0114820-mRNA-1:exon:10431;Parent=Msa0114820-mRNA-1
chr1_3 exon 33085252 33085394 33085252 ID=Msa0114820-mRNA-1:exon:10430;Parent=Msa0114820-mRNA-1
chr1_3 exon 33085484 33085617 33085484 ID=Msa0114820-mRNA-1:exon:10429;Parent=Msa0114820-mRNA-1
chr1_3 exon 33085716 33085961 33085716 ID=Msa0114820-mRNA-1:exon:10428;Parent=Msa0114820-mRNA-1
chr1_3 exon 33085974 33086217 33085974 ID=Msa0114820-mRNA-1:exon:10427;Parent=Msa0114820-mRNA-1
chr1_3 exon 33087524 33087587 33087524 ID=Msa0114820-mRNA-1:exon:10426;Parent=Msa0114820-mRNA-1
chr1_3 exon 33087681 33087959 33087681 ID=Msa0114820-mRNA-1:exon:10425;Parent=Msa0114820-mRNA-1
chr1_3 five_prime_UTR 33087806 33087959 33087806 ID=Msa0114820-mRNA-1:five_prime_utr;Parent=Msa0114820-mRNA-1
chr1_3 CDS 33087681 33087805 33087681 ID=Msa0114820-mRNA-1:cds;Parent=Msa0114820-mRNA-1
chr1_3 CDS 33087524 33087587 33087524 ID=Msa0114820-mRNA-1:cds;Parent=Msa0114820-mRNA-1
chr1_3 CDS 33085974 33086217 33085974 ID=Msa0114820-mRNA-1:cds;Parent=Msa0114820-mRNA-1
chr1_3 CDS 33085716 33085961 33085716 ID=Msa0114820-mRNA-1:cds;Parent=Msa0114820-mRNA-1
chr1_3 CDS 33085484 33085617 33085484 ID=Msa0114820-mRNA-1:cds;Parent=Msa0114820-mRNA-1
chr1_3 CDS 33085252 33085394 33085252 ID=Msa0114820-mRNA-1:cds;Parent=Msa0114820-mRNA-1
chr1_3 CDS 33085104 33085209 33085104 ID=Msa0114820-mRNA-1:cds;Parent=Msa0114820-mRNA-1
chr1_3 CDS 33084955 33085097 33084955 ID=Msa0114820-mRNA-1:cds;Parent=Msa0114820-mRNA-1
chr1_3 CDS 33083502 33084762 33083502 ID=Msa0114820-mRNA-1:cds;Parent=Msa0114820-mRNA-1
chr1_3 three_prime_UTR 33083060 33083501 33083060 ID=Msa0114820-mRNA-1:three_prime_utr;Parent=Msa0114820-mRNA-1
chr1_3 three_prime_UTR 33081712 33082468 33081712 ID=Msa0114820-mRNA-1:three_prime_utr;Parent=Msa0114820-mRNA-1
Gene Sequence

>Msa0114820

ATGATTCATTCGACGGTGAAAGCGGCAACTGCAAAAGAAAAAGAAAAAGATAACGATCGGAGCTTGAGTTCTCACATCATCACCCTTCATCGCCGTCTTCTCCATTCCTTAAACCTTGGCACCAGATATTTTGATGAAAAGACAAATAGATGGAAGTGGCAGTGCGTCAACATTGAAGTACAGAAAAATGAATCTGCTGCTGATATTTTGGGAGCATTGTTATGGATTCTTCAATGCAAAAATGAGCCCTTGTTAAGCATGGCATCAAATGTGGCAGTGAAATTAGTTAGTATTTTACCGAGTCCACTATTGCAACCGTGTTTGTTGGATCTTGTCTATTATTTATCGTCCTTGCTGTCCTCACATCAAGTAGAAGTTGCAATACCTTGTGCTACTGCTTTGAATTTGGTAATCTCAAATCTGAGTGCTACAATTATTGAAGCACTGAAAGAAACAGAGATTTCCATTTGCATTGTTCGAAATATAAAAGACCGCGGTGCACAGAAGATTGAATATTTTGTGGAGATGGCTTCACTTTTGAGCACAATTCTGTTGAGGTGGCCTTCATCTAGGTTCCCTGTTTGTAATGATGTTGAACTTATGAAAGTTTTAGCAAACATGCTTACAAGTACAGATAGTTCTATTAAACTTGTTCTTCTAAAGCTGTACACATCTTTAGCTTTATGTGATTCTGTAGCACAAAAGCTTATAGAGGATGGAAAAGTATTTCTACAAATGATTGTGCAGGCGATGGGAAAATCTAACCCTCATGATGTTCGGATAGAGGGGTTTCGGCTTGCTCAATGTCTATTGAGATCCCAAGAAAATTGTTTAAAAGTGATGGATTCGTGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGAGAGAGACAGGGCCGTGTTCCAAAAGGATTGAGAACAACTATGGTTCTGTATTAGTGGAAGCATGTAAGTTTTGGAAACAAGGAATTGATAAAGTCCTCCTTAATCTTCTAATTGAAAATATTCATGACCAATCTTCCGAAATTGTTTTGCCATTGGAGAAACAAATATCCATGGAGGGACTGAAACTCAATTATCATGTTGCTCTGAGGAGTTATGTGTGGGACGTTCTTGGGTGGCTTACAATTCATTGTGGAGAAAATTCAAACCCCTGTAGTTATACCCATGAGAGTGAACTTCATATCAACTTACTGATTACCTTCACATTTGTGGATGCAATTCAAAAATGGTGCCGGATATATCAAAATGATGCTGATGATAATTTTCAAGGTGAACCAGTATCAAGGGCTGTTTTAATGATGATATATTCTCCATGTAATTATATTTCCTCACATGCTAGATCTGTATTATCTGATATACTGAAGGTCATAGGCGATGTGTACTTGAAAAACTCACTACATACCCTAGATTATATATTATCCCTGAAAAGTTATTGTTCATATGATAAACTCCAACTTGTTATTAACTTAATTGGGTTAACTTGTCTTTCAAGTTTACCACAGTATCAAAGATGTATCATAGAAAGCAGAGGGTTAAAGACTGTTTTTCTTCTGGTGCAACGATGCTTAAGTAATGATATTCATGTAGAAAGGCCAGAGGTTGCTCCTCATTTGCAAACTGTATTCCATAAAAGGTCTTGTTGCTGGATTGGTAAAGGAGACTGGGAAGGTTCCAATGTTGTCTTATTTTATGGTATGTGGGGCTTAGCTGAATTTCTTCATCAGTGTAGCCTTTTACTAGACATTCCTTTGCAATTTAGTAGAGAGGTGACAAACATTAAAACTCAGTTAGTTAACAAACTTAATGAGATCTGTAGTAGCACCTCTTTCAGTCCTGGAGTGAAATGGTATGTTTCTTATATTCTAAGTTATTTTGGATTTTATGGTTTCCCAAATGAATTTTCCAAAAGGATTGGGAACTCTCTTAATAAGGAAGAATATGCAGATTTGCGACTCATTGTAGCAAATGGGGATTCCGTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCAGCACTTCTACCTTCAGAAGTGCTATCTAGTAGTAAGAGTTCTAAAGAAATAACAGATTGTTTTGTTGGAGAGACTGTGAGAGAAGTTCGTTATTCTTCTCATGTTGATTATGAAGCATTGATGTTATTGTTGGAATATGTATATTTGGGAGGCTTGCATGCAGCAGAAGAAGAAGCTGTAAAGAAGCTCAAAGTTCTTGCTAAGCGTTGTAATGTAAAGCCTCTCTTGCAAATGCTTTGCAGACAATCTCCAAAGTGGGGCACACCTTTTCCCAGCTTTAATCTTACTTCATCTCTTGATTCAGCTGGAAGTTATTTTTCGTATGGTTTGCTTCTTGACCAGATTCTTCTAGATATCTATAGGTTTCATGTGATTTGTGACATTGTGTTCTGTTGTTCATCCATGTTTATTTCCATATTTATTTCCTTCCATATACTTGAGTAG
Protein sequence

>Msa0114820

MIHSTVKAATAKEKEKDNDRSLSSHIITLHRRLLHSLNLGTRYFDEKTNRWKWQCVNIEVQKNESAADILGALLWILQCKNEPLLSMASNVAVKLVSILPSPLLQPCLLDLVYYLSSLLSSHQVEVAIPCATALNLVISNLSATIIEALKETEISICIVRNIKDRGAQKIEYFVEMASLLSTILLRWPSSRFPVCNDVELMKVLANMLTSTDSSIKLVLLKLYTSLALCDSVAQKLIEDGKVFLQMIVQAMGKSNPHDVRIEGFRLAQCLLRSQENCLKVMDSCGEALVDAIICGMRETGPCSKRIENNYGSVLVEACKFWKQGIDKVLLNLLIENIHDQSSEIVLPLEKQISMEGLKLNYHVALRSYVWDVLGWLTIHCGENSNPCSYTHESELHINLLITFTFVDAIQKWCRIYQNDADDNFQGEPVSRAVLMMIYSPCNYISSHARSVLSDILKVIGDVYLKNSLHTLDYILSLKSYCSYDKLQLVINLIGLTCLSSLPQYQRCIIESRGLKTVFLLVQRCLSNDIHVERPEVAPHLQTVFHKRSCCWIGKGDWEGSNVVLFYGMWGLAEFLHQCSLLLDIPLQFSREVTNIKTQLVNKLNEICSSTSFSPGVKWYVSYILSYFGFYGFPNEFSKRIGNSLNKEEYADLRLIVANGDSVSVHGVILAVRCPALLPSEVLSSSKSSKEITDCFVGETVREVRYSSHVDYEALMLLLEYVYLGGLHAAEEEAVKKLKVLAKRCNVKPLLQMLCRQSPKWGTPFPSFNLTSSLDSAGSYFSYGLLLDQILLDIYRFHVICDIVFCCSSMFISIFISFHILE*