AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0292000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0292000 MtrunA17_Chr2g0312161 88.795 830 43 6 1 781 1 829 0.0 1442
Msa0292000 MtrunA17_Chr2g0319221 58.730 63 22 1 1 63 1 59 6.67e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0292000 AT1G04390.1 38.290 807 442 11 23 781 10 808 2.45e-163 501

Find 192 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTGTTATTAACTTAAT+TGG 0.088135 2_3:-40739983 Msa0292000:CDS
GGAATCTGCTGCTGATATTT+TGG 0.141395 2_3:-40741692 Msa0292000:CDS
AGTTTATTGACTTGTCATTT+TGG 0.150287 2_3:-40738818 Msa0292000:three_prime_UTR
TCTTATATTCTAAGTTATTT+TGG 0.154673 2_3:-40739581 Msa0292000:CDS
CTCCTTCATATAGGCAATTA+AGG 0.156017 2_3:-40737619 Msa0292000:three_prime_UTR
GCTTGGTGAGTTCTGGATTT+TGG 0.177722 2_3:-40737777 Msa0292000:three_prime_UTR
TGCAAACTGTATTCCATAAA+AGG 0.232443 2_3:-40739823 Msa0292000:CDS
AGACCTGGTGCCAAGGTTTA+AGG 0.234948 2_3:+40743171 None:intergenic
CTCTCTCATCCCACAAATTA+TGG 0.241887 2_3:+40740810 None:intergenic
CTAAAGCTGTACACATCTTT+AGG 0.249325 2_3:-40741211 Msa0292000:intron
ATTGTTGGAATATGTATATT+TGG 0.255950 2_3:-40739294 Msa0292000:CDS
TTGTGCTACTGCTTTGAATT+TGG 0.257052 2_3:-40741494 Msa0292000:CDS
TTTGTTGGCTTGGTGAGTTC+TGG 0.258921 2_3:-40737784 Msa0292000:three_prime_UTR
GCTATGTTACAGTTTATATT+AGG 0.264244 2_3:-40737311 Msa0292000:three_prime_UTR
GCAAAGGAATGTCTAGTAAA+AGG 0.277394 2_3:+40739705 None:intergenic
AAGAGAGTTCCCAATCCTTT+TGG 0.277839 2_3:+40739532 None:intergenic
CTCCAATGGCAAAACAATTT+CGG 0.283584 2_3:+40740615 None:intergenic
GGCAATTAAAATAATCAAAA+TGG 0.286723 2_3:-40737693 Msa0292000:three_prime_UTR
GTCTGGATGTGATTATTTAC+AGG 0.297365 2_3:-40738584 Msa0292000:three_prime_UTR
ATAGTTGTTCTCAATCCTTT+TGG 0.298736 2_3:+40740774 None:intergenic
AACATTTGTTTAAGTAGTTT+AGG 0.303571 2_3:-40738745 Msa0292000:three_prime_UTR
TCAGGGATAATATATAATCT+AGG 0.310303 2_3:+40740032 None:intergenic
TCCATAAAAGGTCTTGTTGC+TGG 0.312735 2_3:-40739811 Msa0292000:CDS
TTGTTGGAATATGTATATTT+GGG 0.319518 2_3:-40739293 Msa0292000:CDS
CAGTCATTCACAAGTTATAA+AGG 0.319849 2_3:-40737945 Msa0292000:three_prime_UTR
AAGGAAGCTACTCAAGTATA+TGG 0.321915 2_3:+40738991 None:intergenic
GGTAACTGTTACAGTTAGTT+AGG 0.324663 2_3:-40737290 Msa0292000:three_prime_UTR
TATATGGAAGGAAATAAATA+TGG 0.328815 2_3:+40739007 None:intergenic
CTTCCACAAAGAGAGCTTAT+AGG 0.328839 2_3:+40737670 None:intergenic
TTTCTGCAGCTTCACATTTG+TGG 0.335071 2_3:-40740245 Msa0292000:intron
TAGCCTAACAGCTCAAAATA+AGG 0.350134 2_3:+40737330 None:intergenic
GATTGGGAACTCTCTTAATA+AGG 0.355453 2_3:-40739525 Msa0292000:CDS
AAAAGGATTGAGAACAACTA+TGG 0.357983 2_3:-40740772 Msa0292000:CDS
TGTTGAGGTGGCCTTCATCT+AGG 0.358318 2_3:-40741318 Msa0292000:CDS
GCAAAACAATTTCGGAAGAT+TGG 0.358748 2_3:+40740623 None:intergenic
AACTTGTTATTAACTTAATT+GGG 0.359198 2_3:-40739982 Msa0292000:CDS
ATTAAAACAGCCCTTGATAC+TGG 0.361067 2_3:+40740160 None:intergenic
TGAAGCATTGATGTTATTGT+TGG 0.363458 2_3:-40739309 Msa0292000:CDS
TAATGGAAGCTAAATTGAAT+TGG 0.363985 2_3:-40738678 Msa0292000:three_prime_UTR
ATGTTCGGATAGAGGGGTTT+CGG 0.364447 2_3:-40740998 Msa0292000:CDS
CAATAGAAGCGGAATAAATA+AGG 0.367946 2_3:+40737555 None:intergenic
AGATTCTTCTAGATATCTAT+AGG 0.370144 2_3:-40739079 Msa0292000:CDS
TTGCGACTCATTGTAGCAAA+TGG 0.377835 2_3:-40739488 Msa0292000:CDS
TCGGCTTGCTCAATGTCTAT+TGG 0.377904 2_3:-40740979 Msa0292000:intron
AAAGTATTCAGGAAGCTTGC+TGG 0.379435 2_3:-40737754 Msa0292000:three_prime_UTR
TCCTTCATATAGGCAATTAA+GGG 0.380231 2_3:-40737618 Msa0292000:three_prime_UTR
AGTTATGTGTGGGACGTTCT+TGG 0.385008 2_3:-40740535 Msa0292000:CDS
AACAAACACGGTTGCAATAG+TGG 0.393093 2_3:+40741577 None:intergenic
AGAAAATTGTTTAAAAGTGA+TGG 0.395093 2_3:-40740860 Msa0292000:CDS
AAAATGACAAGTCAATAAAC+TGG 0.400238 2_3:+40738820 None:intergenic
GCTAAATTGAATTGGCTTGT+TGG 0.400345 2_3:-40738670 Msa0292000:three_prime_UTR
TTGATGAAAAGACAAATAGA+TGG 0.406878 2_3:-40743056 Msa0292000:CDS
AAAAGGTCTTGTTGCTGGAT+TGG 0.407271 2_3:-40739806 Msa0292000:CDS
TATGTGGAGCTTTGTTGGCT+TGG 0.408026 2_3:-40737794 Msa0292000:three_prime_UTR
AGTTCAACATCATTACAAAC+AGG 0.413790 2_3:+40741292 None:intergenic
ACTATTGCAACCGTGTTTGT+TGG 0.414256 2_3:-40741575 Msa0292000:CDS
TTATAAAGGTTGATATTAGC+TGG 0.423730 2_3:-40737931 Msa0292000:three_prime_UTR
CTTCTCCATTCCTTAAACCT+TGG 0.423873 2_3:-40743181 Msa0292000:CDS
CAACTATGGTTCTGTATTAG+TGG 0.423956 2_3:-40740758 Msa0292000:CDS
TGCGACTCATTGTAGCAAAT+GGG 0.425092 2_3:-40739487 Msa0292000:CDS
AGCCATATGTGGAGCTTTGT+TGG 0.425519 2_3:-40737799 Msa0292000:three_prime_UTR
TATAGATATCTAGAAGAATC+TGG 0.427973 2_3:+40739081 None:intergenic
CCCTCATGATGTTCGGATAG+AGG 0.430203 2_3:-40741006 Msa0292000:CDS
TTACAGGGTTTGTTCAGATC+AGG 0.430822 2_3:-40738568 Msa0292000:three_prime_UTR
GGGGATTCCGTGAGTGTTCA+TGG 0.433973 2_3:-40739467 Msa0292000:CDS
TGGAATACAGTTTGCAAATG+AGG 0.436839 2_3:+40739830 None:intergenic
CTATAAACTGGATAATAGAA+TGG 0.438864 2_3:+40738864 None:intergenic
TTGTTGATGCCATAATTTGT+GGG 0.444369 2_3:-40740819 Msa0292000:CDS
GTTATGTGTGGGACGTTCTT+GGG 0.450565 2_3:-40740534 Msa0292000:CDS
TATATTTCGAACAATGCAAA+TGG 0.452695 2_3:+40741405 None:intergenic
TCTGTAAAATATCAATTTCA+AGG 0.455343 2_3:+40738972 None:intergenic
TAAGCTCTCTTTGTGGAAGT+TGG 0.457752 2_3:-40737666 Msa0292000:three_prime_UTR
TGCAAATGAGGAGCAACCTC+TGG 0.459121 2_3:+40739842 None:intergenic
TTCAAGGTGAACCAGTATCA+AGG 0.459159 2_3:-40740171 Msa0292000:CDS
AGATGAAGTAAGATTAAAGC+TGG 0.462284 2_3:+40739148 None:intergenic
ACTTCATCTCTTGATTCAGC+TGG 0.463446 2_3:-40739134 Msa0292000:CDS
CTTTCAGTCCTGGAGTGAAA+TGG 0.463586 2_3:-40739610 Msa0292000:CDS
TCTGATATACTGAAGGTCAT+AGG 0.465492 2_3:-40740085 Msa0292000:CDS
CCTCATGATGTTCGGATAGA+GGG 0.466662 2_3:-40741005 Msa0292000:CDS
CACAAAGTTATATTGCAGTC+TGG 0.467245 2_3:-40738601 Msa0292000:three_prime_UTR
ACTCTCATGGGTATAACTAC+AGG 0.470412 2_3:+40740477 None:intergenic
CTGCAAAGCATTTGCAAGAG+AGG 0.471231 2_3:+40739200 None:intergenic
AATGGAGAAGACGGCGATGA+AGG 0.471770 2_3:+40743194 None:intergenic
TGATATGAAGTTCACTCTCA+TGG 0.474270 2_3:+40740464 None:intergenic
ATGGATATTTGTTTCTCCAA+TGG 0.474322 2_3:+40740601 None:intergenic
AATTGAATTGGCTTGTTGGA+TGG 0.479401 2_3:-40738666 Msa0292000:three_prime_UTR
TCTTGATTCTTCTAAGCAGT+TGG 0.480319 2_3:-40737714 Msa0292000:three_prime_UTR
GTAAGATTAAAGCTGGGAAA+AGG 0.480512 2_3:+40739155 None:intergenic
AGCCAACAAAGCTCCACATA+TGG 0.482790 2_3:+40737797 None:intergenic
AATCTAACCCTCATGATGTT+CGG 0.483450 2_3:-40741013 Msa0292000:CDS
GGAAAAGGTGTGCCCCACTT+TGG 0.488293 2_3:+40739170 None:intergenic
AGTAGCACCTCTTTCAGTCC+TGG 0.489560 2_3:-40739620 Msa0292000:CDS
ATTTGTGGGATGAGAGAGAC+AGG 0.492475 2_3:-40740805 Msa0292000:CDS
TGGTTGTTTGTGGGTTAACA+TGG 0.493074 2_3:-40737849 Msa0292000:three_prime_UTR
TCTGAAAGGACTGTTAAACT+TGG 0.494623 2_3:-40738916 Msa0292000:three_prime_UTR
TGAACATGCATATGTGGTAC+TGG 0.495754 2_3:+40738622 None:intergenic
ATTCAATTTGCAGCCATATG+TGG 0.496585 2_3:-40737810 Msa0292000:three_prime_UTR
CAGGGATAATATATAATCTA+GGG 0.497938 2_3:+40740033 None:intergenic
TATAAAGGTTGATATTAGCT+GGG 0.501910 2_3:-40737930 Msa0292000:three_prime_UTR
ATTCCTTAAACCTTGGCACC+AGG 0.502270 2_3:-40743174 Msa0292000:intron
GTCTCATAGCTCCTTCATAT+AGG 0.503354 2_3:-40737628 Msa0292000:three_prime_UTR
ACAAATGATTGTGCAGGCGA+TGG 0.504540 2_3:-40741039 Msa0292000:CDS
GTAGGCTGCAAGAAAAGCTT+GGG 0.508267 2_3:-40737233 Msa0292000:three_prime_UTR
CATTGATTAAACTAGTACAT+TGG 0.512817 2_3:-40737904 Msa0292000:three_prime_UTR
CTCTCATGGGTATAACTACA+GGG 0.512953 2_3:+40740478 None:intergenic
ATTGAATTGGCTTGTTGGAT+GGG 0.513309 2_3:-40738665 Msa0292000:three_prime_UTR
TGGCCTATAAGCTCTCTTTG+TGG 0.514178 2_3:-40737673 Msa0292000:three_prime_UTR
GCTGGATTGGTAAAGGAGAC+TGG 0.514721 2_3:-40739793 Msa0292000:CDS
CTTGTTGATGCCATAATTTG+TGG 0.517271 2_3:-40740820 Msa0292000:CDS
ATTTCTACAAATGATTGTGC+AGG 0.517797 2_3:-40741045 Msa0292000:CDS
TCTTGTTGCTGGATTGGTAA+AGG 0.518147 2_3:-40739800 Msa0292000:CDS
ATTTGATGCCATGCTTAACA+AGG 0.520764 2_3:+40741633 None:intergenic
CCCTCTATCCGAACATCATG+AGG 0.521428 2_3:+40741005 None:intergenic
TCCTTTGCAATTTAGTAGAG+AGG 0.521866 2_3:-40739690 Msa0292000:CDS
TCTATTGAACTTAACCATGA+AGG 0.522377 2_3:-40737539 Msa0292000:three_prime_UTR
GAGAGAGAGACCTGGTGCCA+AGG 0.523511 2_3:+40743164 None:intergenic
TACAGTTATGATTCATTCGA+CGG 0.524471 2_3:-40743284 Msa0292000:exon
AGTAGGCTGCAAGAAAAGCT+TGG 0.524766 2_3:-40737234 Msa0292000:three_prime_UTR
CAAATGATTGTGCAGGCGAT+GGG 0.525532 2_3:-40741038 Msa0292000:CDS
ATGGAGAAGACGGCGATGAA+GGG 0.526641 2_3:+40743195 None:intergenic
GTAATGATATTCATGTAGAA+AGG 0.527922 2_3:-40739865 Msa0292000:CDS
TGTAGCACAAAAGCTTATAG+AGG 0.528432 2_3:-40741078 Msa0292000:CDS
TCCCTTAATTGCCTATATGA+AGG 0.529685 2_3:+40737617 None:intergenic
GCACAAAAGCTTATAGAGGA+TGG 0.531800 2_3:-40741074 Msa0292000:CDS
CAATTAAGTTAATAACAAGT+TGG 0.532753 2_3:+40739984 None:intergenic
CACGGTTGCAATAGTGGACT+CGG 0.534163 2_3:+40741583 None:intergenic
AGACAGGGCCGTGTTCCAAA+AGG 0.534873 2_3:-40740789 Msa0292000:CDS
TGAGCACAATTCTGTTGAGG+TGG 0.536544 2_3:-40741330 Msa0292000:CDS
ATAAGAGTTGCGTTTCTGAA+AGG 0.539156 2_3:-40738930 Msa0292000:three_prime_UTR
AAAAGACAAATAGATGGAAG+TGG 0.544965 2_3:-40743050 Msa0292000:CDS
GATGAAGTAAGATTAAAGCT+GGG 0.545003 2_3:+40739149 None:intergenic
ACTTCTGAAGGTAGAAGTGC+TGG 0.546217 2_3:+40739422 None:intergenic
CTGGATTGGTAAAGGAGACT+GGG 0.546314 2_3:-40739792 Msa0292000:CDS
TTGGAATATGTATATTTGGG+AGG 0.551105 2_3:-40739290 Msa0292000:CDS
GATTCATTCGACGGTGAAAG+CGG 0.556753 2_3:-40743275 Msa0292000:CDS
TTGCAGACAATCTCCAAAGT+GGG 0.558280 2_3:-40739183 Msa0292000:CDS
TTTCACTCCAGGACTGAAAG+AGG 0.560173 2_3:+40739613 None:intergenic
TGGTGCCAAGGTTTAAGGAA+TGG 0.562873 2_3:+40743176 None:intergenic
AATAAATATGGAAATAAACA+TGG 0.567158 2_3:+40739019 None:intergenic
ATGGTTAAGTTCAATAGAAG+CGG 0.567320 2_3:+40737544 None:intergenic
TCTGGATGTGATTATTTACA+GGG 0.570759 2_3:-40738583 Msa0292000:three_prime_UTR
TCAAGGTGAACCAGTATCAA+GGG 0.573541 2_3:-40740170 Msa0292000:CDS
ACCATAAAATAAGACAACAT+TGG 0.575853 2_3:+40739763 None:intergenic
ATTGGAGAAACAAATATCCA+TGG 0.576382 2_3:-40740599 Msa0292000:intron
GAAACATACCATTTCACTCC+AGG 0.577863 2_3:+40739602 None:intergenic
GATATGAAGTTCACTCTCAT+GGG 0.583514 2_3:+40740465 None:intergenic
GATTATCAACTCTCTCTCGA+CGG 0.583579 2_3:-40743318 Msa0292000:five_prime_UTR
AAATGAGCCCTTGTTAAGCA+TGG 0.585174 2_3:-40741641 Msa0292000:CDS
ATGATACATCTTTGATACTG+TGG 0.585455 2_3:+40739938 None:intergenic
AAGCTACTCAAGTATATGGA+AGG 0.586317 2_3:+40738995 None:intergenic
GCGACTCATTGTAGCAAATG+GGG 0.586804 2_3:-40739486 Msa0292000:CDS
TGTATTATCTGATATACTGA+AGG 0.587784 2_3:-40740092 Msa0292000:CDS
ACCTCTCTACTAAATTGCAA+AGG 0.591394 2_3:+40739689 None:intergenic
CAAACAGGGAACCTAGATGA+AGG 0.594928 2_3:+40741307 None:intergenic
TACTTGATGTGAGGACAGCA+AGG 0.595534 2_3:+40741531 None:intergenic
AACCCACAAACAACCAGAAG+GGG 0.597408 2_3:+40737856 None:intergenic
ACTTTGTGAACATGCATATG+TGG 0.600186 2_3:+40738616 None:intergenic
GTTAAGCATGGCATCAAATG+TGG 0.600853 2_3:-40741629 Msa0292000:CDS
TTGCTCTGAGGAGTTATGTG+TGG 0.604086 2_3:-40740546 Msa0292000:CDS
TAATACAGATCTAGCATGTG+AGG 0.610195 2_3:+40740108 None:intergenic
TGCAACTTCTACTTGATGTG+AGG 0.612048 2_3:+40741522 None:intergenic
TGCTCTGAGGAGTTATGTGT+GGG 0.613589 2_3:-40740545 Msa0292000:CDS
GGGTGGCTTACAATTCATTG+TGG 0.615987 2_3:-40740514 Msa0292000:CDS
GGTTTAAGGAATGGAGAAGA+CGG 0.616386 2_3:+40743185 None:intergenic
CTCATGATGTTCGGATAGAG+GGG 0.616659 2_3:-40741004 Msa0292000:CDS
GATGTATCATAGAAAGCAGA+GGG 0.617898 2_3:-40739925 Msa0292000:CDS
TAACCCACAAACAACCAGAA+GGG 0.618235 2_3:+40737855 None:intergenic
AATAACACCATGAACACTCA+CGG 0.621202 2_3:+40739460 None:intergenic
TGTGAGGAAATATAATTACA+TGG 0.628481 2_3:+40740124 None:intergenic
TTTGCAGACAATCTCCAAAG+TGG 0.628783 2_3:-40739184 Msa0292000:CDS
TCAGATCAGGAATGCAAGAG+AGG 0.630141 2_3:-40738555 Msa0292000:intron
TTCTGCAAAGTCCTGTCAGT+AGG 0.633451 2_3:-40737251 Msa0292000:three_prime_UTR
TTAACCCACAAACAACCAGA+AGG 0.634727 2_3:+40737854 None:intergenic
TTTCAATTAGAAGATTAAGG+AGG 0.635301 2_3:+40740656 None:intergenic
ATGTGTGGGACGTTCTTGGG+TGG 0.646051 2_3:-40740531 Msa0292000:CDS
CTACTAGATAGCACTTCTGA+AGG 0.647267 2_3:+40739410 None:intergenic
TTTGATGCCATGCTTAACAA+GGG 0.651494 2_3:+40741634 None:intergenic
AGATGTATCATAGAAAGCAG+AGG 0.653768 2_3:-40739926 Msa0292000:CDS
ATTGGTAAAGGAGACTGGGA+AGG 0.660276 2_3:-40739788 Msa0292000:CDS
CCTCTATCCGAACATCATGA+GGG 0.663643 2_3:+40741006 None:intergenic
AAATTCAAAGCAGTAGCACA+AGG 0.669590 2_3:+40741496 None:intergenic
TGCAGACAATCTCCAAAGTG+GGG 0.673141 2_3:-40739182 Msa0292000:CDS
TCAATTATCATGTTGCTCTG+AGG 0.675945 2_3:-40740558 Msa0292000:CDS
ACCCACAAACAACCAGAAGG+GGG 0.681171 2_3:+40737857 None:intergenic
GTTCAACATCATTACAAACA+GGG 0.689432 2_3:+40741293 None:intergenic
TAGACAAGATCCAACAAACA+CGG 0.705372 2_3:+40741565 None:intergenic
TTAAAAGTGATGGATTCGTG+TGG 0.719236 2_3:-40740850 Msa0292000:CDS
TATTCATGTAGAAAGGCCAG+AGG 0.722961 2_3:-40739858 Msa0292000:CDS
TCTCATGGGTATAACTACAG+GGG 0.729707 2_3:+40740479 None:intergenic
TTTGTGGGATGAGAGAGACA+GGG 0.753747 2_3:-40740804 Msa0292000:CDS
GTTCGAAATATAAAAGACCG+CGG 0.753888 2_3:-40741394 Msa0292000:CDS
ATTCAATCTTCTGTGCACCG+CGG 0.760395 2_3:+40741377 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATAATAAAGGATATTT+TGG + chr2_3:40738641-40738660 None:intergenic 10.0%
!! TGTGATAATTATTATAATAA+AGG + chr2_3:40738650-40738669 None:intergenic 10.0%
!!! ATTATATTTCTAAAATTTCA+TGG - chr2_3:40740319-40740338 Msa0292000:intron 10.0%
!!! TAGTTTCTTATATTTTTTCT+AGG + chr2_3:40738110-40738129 None:intergenic 15.0%
!! AGAGATTTCTATTATAAATA+AGG + chr2_3:40738575-40738594 None:intergenic 15.0%
!!! ATTATCACATTAATTTGTAT+TGG - chr2_3:40738661-40738680 Msa0292000:three_prime_UTR 15.0%
!!! TTATCACATTAATTTGTATT+GGG - chr2_3:40738662-40738681 Msa0292000:three_prime_UTR 15.0%
!!! TTGTTTTATATGATAAACAT+TGG - chr2_3:40739691-40739710 Msa0292000:CDS 15.0%
!!! TATTTTCAATTAGAAGATTA+AGG + chr2_3:40739988-40740007 None:intergenic 15.0%
!! AAGTCATACAAAAATAATAA+TGG + chr2_3:40740238-40740257 None:intergenic 15.0%
!!! AATTTTAGAAATATAATCAG+TGG + chr2_3:40740316-40740335 None:intergenic 15.0%
!!! AACTTGTTATTAACTTAATT+GGG - chr2_3:40740656-40740675 Msa0292000:CDS 15.0%
!!! TCTTATATTCTAAGTTATTT+TGG - chr2_3:40741057-40741076 Msa0292000:CDS 15.0%
!! AATAAATATGGAAATAAACA+TGG + chr2_3:40741622-40741641 None:intergenic 15.0%
!!! ATTTTTAGTTTGAAAGTTAT+AGG - chr2_3:40743253-40743272 Msa0292000:CDS 15.0%
!! AAAAAGAAAAAGATAACGAT+CGG - chr2_3:40737398-40737417 Msa0292000:three_prime_UTR 20.0%
!!! GGTAATTTTTCTTTTTTTTG+CGG - chr2_3:40737715-40737734 Msa0292000:three_prime_UTR 20.0%
!! CATTCATTAAATATTGTATG+TGG - chr2_3:40737854-40737873 Msa0292000:three_prime_UTR 20.0%
!!! TTTTTTCTTATAATAGTGAC+CGG - chr2_3:40737929-40737948 Msa0292000:three_prime_UTR 20.0%
!! TACGAAAATTAGATAAAGAT+AGG - chr2_3:40737967-40737986 Msa0292000:intron 20.0%
!! GTATTTAGATATTAATGAGT+TGG - chr2_3:40738286-40738305 Msa0292000:intron 20.0%
!! AATATTTCGTATCTATAACA+TGG - chr2_3:40738524-40738543 Msa0292000:intron 20.0%
!! TTGAAAATAGAAAATCAGTA+AGG - chr2_3:40738700-40738719 Msa0292000:three_prime_UTR 20.0%
!! TGAAAATAGAAAATCAGTAA+GGG - chr2_3:40738701-40738720 Msa0292000:three_prime_UTR 20.0%
!! ATATCAAATAAAGCTGAATT+TGG - chr2_3:40738740-40738759 Msa0292000:three_prime_UTR 20.0%
!!! ATGACTTTTGCTTATAAATA+AGG - chr2_3:40738798-40738817 Msa0292000:three_prime_UTR 20.0%
!!! ATTTGTTTTAAGAGAGATAA+GGG - chr2_3:40738843-40738862 Msa0292000:three_prime_UTR 20.0%
!!! AATGTTTTTTGTTTTGTTGA+GGG + chr2_3:40739479-40739498 None:intergenic 20.0%
!!! AAATGTTTTTTGTTTTGTTG+AGG + chr2_3:40739480-40739499 None:intergenic 20.0%
!!! CACTTTTAAACAATTTTCTT+GGG + chr2_3:40739777-40739796 None:intergenic 20.0%
!!! TCACTTTTAAACAATTTTCT+TGG + chr2_3:40739778-40739797 None:intergenic 20.0%
!! AGAAAATTGTTTAAAAGTGA+TGG - chr2_3:40739778-40739797 Msa0292000:CDS 20.0%
!!! ATATGAACAATAACTTTTCA+GGG + chr2_3:40740626-40740645 None:intergenic 20.0%
!! CAATTAAGTTAATAACAAGT+TGG + chr2_3:40740657-40740676 None:intergenic 20.0%
!!! CAACTTGTTATTAACTTAAT+TGG - chr2_3:40740655-40740674 Msa0292000:CDS 20.0%
!!! CTAAGTTATTTTGGATTTTA+TGG - chr2_3:40741066-40741085 Msa0292000:CDS 20.0%
!! ATTGTTGGAATATGTATATT+TGG - chr2_3:40741344-40741363 Msa0292000:CDS 20.0%
!! TTGTTGGAATATGTATATTT+GGG - chr2_3:40741345-40741364 Msa0292000:CDS 20.0%
!! TATATGGAAGGAAATAAATA+TGG + chr2_3:40741634-40741653 None:intergenic 20.0%
!! TCTGTAAAATATCAATTTCA+AGG + chr2_3:40741669-40741688 None:intergenic 20.0%
!!! CAACTCTTATTTGAAAAATA+CGG + chr2_3:40741698-40741717 None:intergenic 20.0%
!! AACATTTGTTTAAGTAGTTT+AGG - chr2_3:40741893-40741912 Msa0292000:intron 20.0%
!!! AGAATTTAATTTGAACATCT+AGG + chr2_3:40742188-40742207 None:intergenic 20.0%
!! CAAACAATACTTTATCAAAT+AGG + chr2_3:40742362-40742381 None:intergenic 20.0%
!!! CTATTTGATAAAGTATTGTT+TGG - chr2_3:40742360-40742379 Msa0292000:intron 20.0%
!! TTCAAACTTAATCTAAGAAT+TGG - chr2_3:40742416-40742435 Msa0292000:intron 20.0%
!! ACATTAACATTTCATAAAGA+TGG + chr2_3:40742465-40742484 None:intergenic 20.0%
!!! TCTGTTAACTTTAAATTTTG+TGG - chr2_3:40742621-40742640 Msa0292000:intron 20.0%
!! GGCAATTAAAATAATCAAAA+TGG - chr2_3:40742945-40742964 Msa0292000:intron 20.0%
!!! AAAAATTGGTTGATGATTGA+TGG - chr2_3:40737261-40737280 Msa0292000:three_prime_UTR 25.0%
! AAAAAAGCGAAGAATGAATT+CGG + chr2_3:40737509-40737528 None:intergenic 25.0%
! TTGATGAAAAGACAAATAGA+TGG - chr2_3:40737582-40737601 Msa0292000:three_prime_UTR 25.0%
! AAGAAAAATTACCTTAACCA+TGG + chr2_3:40737708-40737727 None:intergenic 25.0%
! ATTAGTGATATATTAGTGAC+CGG + chr2_3:40737808-40737827 None:intergenic 25.0%
!! TAATGAGTTGGATACAAATA+TGG - chr2_3:40738298-40738317 Msa0292000:intron 25.0%
! AATTATTTGGCACACAAAAA+AGG + chr2_3:40738465-40738484 None:intergenic 25.0%
!!! TTTTTTGTGTGCCAAATAAT+TGG - chr2_3:40738464-40738483 Msa0292000:intron 25.0%
!! AAAGATTGGTTATTGCTAAA+CGG - chr2_3:40738496-40738515 Msa0292000:intron 25.0%
! TCTATTATAAATAAGGTCGA+AGG + chr2_3:40738568-40738587 None:intergenic 25.0%
! GAAAATAGAAAATCAGTAAG+GGG - chr2_3:40738702-40738721 Msa0292000:three_prime_UTR 25.0%
!!! CATTTGTTTTAAGAGAGATA+AGG - chr2_3:40738842-40738861 Msa0292000:three_prime_UTR 25.0%
!!! TTTGTTTTAAGAGAGATAAG+GGG - chr2_3:40738844-40738863 Msa0292000:three_prime_UTR 25.0%
! TATATTTCGAACAATGCAAA+TGG + chr2_3:40739236-40739255 None:intergenic 25.0%
!! ACAGAAGATTGAATATTTTG+TGG - chr2_3:40739270-40739289 Msa0292000:CDS 25.0%
!!! ATGTTTTTTGTTTTGTTGAG+GGG + chr2_3:40739478-40739497 None:intergenic 25.0%
! GACAAAAGTAAATGTTTGTT+AGG + chr2_3:40739743-40739762 None:intergenic 25.0%
! TTTCAATTAGAAGATTAAGG+AGG + chr2_3:40739985-40740004 None:intergenic 25.0%
! TTAGAAATATAATCAGTGGT+AGG + chr2_3:40740312-40740331 None:intergenic 25.0%
! TGTGAGGAAATATAATTACA+TGG + chr2_3:40740517-40740536 None:intergenic 25.0%
! TGTATTATCTGATATACTGA+AGG - chr2_3:40740546-40740565 Msa0292000:CDS 25.0%
! CAGGGATAATATATAATCTA+GGG + chr2_3:40740608-40740627 None:intergenic 25.0%
! TCAGGGATAATATATAATCT+AGG + chr2_3:40740609-40740628 None:intergenic 25.0%
!! CATATGAACAATAACTTTTC+AGG + chr2_3:40740627-40740646 None:intergenic 25.0%
! GTAATGATATTCATGTAGAA+AGG - chr2_3:40740773-40740792 Msa0292000:CDS 25.0%
!!! TCCAATGTTGTCTTATTTTA+TGG - chr2_3:40740874-40740893 Msa0292000:intron 25.0%
! ACCATAAAATAAGACAACAT+TGG + chr2_3:40740878-40740897 None:intergenic 25.0%
!!! TTGTCTTATTTTATGGTATG+TGG - chr2_3:40740881-40740900 Msa0292000:intron 25.0%
!!! TGTCTTATTTTATGGTATGT+GGG - chr2_3:40740882-40740901 Msa0292000:intron 25.0%
!!! TCCTTTTGGAAAATTCATTT+GGG + chr2_3:40741095-40741114 None:intergenic 25.0%
!!! ATCCTTTTGGAAAATTCATT+TGG + chr2_3:40741096-40741115 None:intergenic 25.0%
!! AATGAATTTTCCAAAAGGAT+TGG - chr2_3:40741096-40741115 Msa0292000:intron 25.0%
!! ATGAATTTTCCAAAAGGATT+GGG - chr2_3:40741097-40741116 Msa0292000:intron 25.0%
!!! GAAATAACAGATTGTTTTGT+TGG - chr2_3:40741264-40741283 Msa0292000:CDS 25.0%
! TATAGATATCTAGAAGAATC+TGG + chr2_3:40741560-40741579 None:intergenic 25.0%
! AGATTCTTCTAGATATCTAT+AGG - chr2_3:40741559-40741578 Msa0292000:CDS 25.0%
! CTATAAACTGGATAATAGAA+TGG + chr2_3:40741777-40741796 None:intergenic 25.0%
! AAAATGACAAGTCAATAAAC+TGG + chr2_3:40741821-40741840 None:intergenic 25.0%
!!! AGTTTATTGACTTGTCATTT+TGG - chr2_3:40741820-40741839 Msa0292000:intron 25.0%
!!! GTTTATTGACTTGTCATTTT+GGG - chr2_3:40741821-40741840 Msa0292000:intron 25.0%
! TAATGGAAGCTAAATTGAAT+TGG - chr2_3:40741960-40741979 Msa0292000:intron 25.0%
! CTCATGAAAATTTAAGAACA+TGG - chr2_3:40742230-40742249 Msa0292000:intron 25.0%
! TTTATATCTTATCTTGACCA+GGG - chr2_3:40742277-40742296 Msa0292000:intron 25.0%
! CATCAAAAATCAAAAGCAAA+GGG + chr2_3:40742504-40742523 None:intergenic 25.0%
! TCATCAAAAATCAAAAGCAA+AGG + chr2_3:40742505-40742524 None:intergenic 25.0%
!! ATTTTCAACCAAATTCGTTT+GGG - chr2_3:40742534-40742553 Msa0292000:intron 25.0%
! ATCCTTAAAAATTAGAAGCA+AGG - chr2_3:40742559-40742578 Msa0292000:intron 25.0%
!! ATCCTTGCTTCTAATTTTTA+AGG + chr2_3:40742564-40742583 None:intergenic 25.0%
! GGACAATTTCTCATAAAAAA+TGG + chr2_3:40742590-40742609 None:intergenic 25.0%
! GACTGCAATAATAAATAACA+AGG + chr2_3:40742678-40742697 None:intergenic 25.0%
!!! TTATAAAGGTTGATATTAGC+TGG - chr2_3:40742707-40742726 Msa0292000:intron 25.0%
!!! TATAAAGGTTGATATTAGCT+GGG - chr2_3:40742708-40742727 Msa0292000:intron 25.0%
!! CATTGATTAAACTAGTACAT+TGG - chr2_3:40742734-40742753 Msa0292000:intron 25.0%
!! ATACTCTTCAAGATGTTTTA+CGG - chr2_3:40743145-40743164 Msa0292000:intron 25.0%
! TTCGAAAAACTTCATATTCT+AGG + chr2_3:40743283-40743302 None:intergenic 25.0%
! GCTATGTTACAGTTTATATT+AGG - chr2_3:40743327-40743346 Msa0292000:five_prime_UTR 25.0%
TACAGTTATGATTCATTCGA+CGG - chr2_3:40737354-40737373 Msa0292000:three_prime_UTR 30.0%
AAAAGACAAATAGATGGAAG+TGG - chr2_3:40737588-40737607 Msa0292000:three_prime_UTR 30.0%
!! CAGTTATTTTATTCTCGTGT+TGG + chr2_3:40737748-40737767 None:intergenic 30.0%
! ATGTTGTGGATTTTATCGTA+AGG - chr2_3:40738036-40738055 Msa0292000:intron 30.0%
ATAGTTCAAAGTTCAAACGA+TGG + chr2_3:40738343-40738362 None:intergenic 30.0%
CAATAACCAATCTTTGTTAG+GGG + chr2_3:40738491-40738510 None:intergenic 30.0%
GCAATAACCAATCTTTGTTA+GGG + chr2_3:40738492-40738511 None:intergenic 30.0%
AGCAATAACCAATCTTTGTT+AGG + chr2_3:40738493-40738512 None:intergenic 30.0%
CAAAAGTCATCCTAATTTCA+TGG + chr2_3:40738788-40738807 None:intergenic 30.0%
TTGCTTATAAATAAGGCTAG+AGG - chr2_3:40738805-40738824 Msa0292000:three_prime_UTR 30.0%
TGCTTATAAATAAGGCTAGA+GGG - chr2_3:40738806-40738825 Msa0292000:three_prime_UTR 30.0%
!!! TTGTTTTAAGAGAGATAAGG+GGG - chr2_3:40738845-40738864 Msa0292000:three_prime_UTR 30.0%
GGGCTTATTATAGTTGAATT+TGG - chr2_3:40738866-40738885 Msa0292000:three_prime_UTR 30.0%
AATATGTGCTTTACTTCATC+AGG - chr2_3:40738925-40738944 Msa0292000:three_prime_UTR 30.0%
!!! ATATTTTGGGAGCATTGTTA+TGG - chr2_3:40738960-40738979 Msa0292000:three_prime_UTR 30.0%
! GATTGAATATTTTGTGGAGA+TGG - chr2_3:40739276-40739295 Msa0292000:CDS 30.0%
GTTCAACATCATTACAAACA+GGG + chr2_3:40739348-40739367 None:intergenic 30.0%
AGTTCAACATCATTACAAAC+AGG + chr2_3:40739349-40739368 None:intergenic 30.0%
TAGTCTAAGTAATTGACACA+AGG + chr2_3:40739503-40739522 None:intergenic 30.0%
ATTTCTACAAATGATTGTGC+AGG - chr2_3:40739593-40739612 Msa0292000:CDS 30.0%
! TTGTTGATGCCATAATTTGT+GGG - chr2_3:40739819-40739838 Msa0292000:CDS 30.0%
! ATAGTTGTTCTCAATCCTTT+TGG + chr2_3:40739867-40739886 None:intergenic 30.0%
AAAAGGATTGAGAACAACTA+TGG - chr2_3:40739866-40739885 Msa0292000:CDS 30.0%
! ATGGATATTTGTTTCTCCAA+TGG + chr2_3:40740040-40740059 None:intergenic 30.0%
ATTGGAGAAACAAATATCCA+TGG - chr2_3:40740039-40740058 Msa0292000:CDS 30.0%
GAAACAAATATCCATGGTAA+AGG - chr2_3:40740045-40740064 Msa0292000:CDS 30.0%
AGAAATTTGCACAACATCAA+TGG + chr2_3:40740369-40740388 None:intergenic 30.0%
TTGTGGATGCAATTCAAAAA+TGG - chr2_3:40740410-40740429 Msa0292000:intron 30.0%
!! CAGCATCATTTTGATATATC+CGG + chr2_3:40740438-40740457 None:intergenic 30.0%
! GATGCTGATGATAATTTTCA+AGG - chr2_3:40740451-40740470 Msa0292000:CDS 30.0%
ATGATACATCTTTGATACTG+TGG + chr2_3:40740703-40740722 None:intergenic 30.0%
!! GTTAAAGACTGTTTTTCTTC+TGG - chr2_3:40740735-40740754 Msa0292000:intron 30.0%
TGCAAACTGTATTCCATAAA+AGG - chr2_3:40740815-40740834 Msa0292000:CDS 30.0%
!!! GTCTTATTTTATGGTATGTG+GGG - chr2_3:40740883-40740902 Msa0292000:intron 30.0%
! TCCCAAATGAATTTTCCAAA+AGG - chr2_3:40741091-40741110 Msa0292000:CDS 30.0%
!! TGAAGCATTGATGTTATTGT+TGG - chr2_3:40741329-40741348 Msa0292000:CDS 30.0%
TTGGAATATGTATATTTGGG+AGG - chr2_3:40741348-40741367 Msa0292000:CDS 30.0%
GATGAAGTAAGATTAAAGCT+GGG + chr2_3:40741492-40741511 None:intergenic 30.0%
AGATGAAGTAAGATTAAAGC+TGG + chr2_3:40741493-40741512 None:intergenic 30.0%
!!! ACAGCTGTTTTTCTATAAAC+TGG + chr2_3:40741789-40741808 None:intergenic 30.0%
!! GTCATTTTGGGTAAAGTTAA+CGG - chr2_3:40741833-40741852 Msa0292000:intron 30.0%
! TGTTTTCAGAGATGTCATAA+TGG - chr2_3:40741943-40741962 Msa0292000:intron 30.0%
TCTGGATGTGATTATTTACA+GGG - chr2_3:40742055-40742074 Msa0292000:intron 30.0%
TCTTTGCCTATTATTTAAGC+TGG - chr2_3:40742205-40742224 Msa0292000:intron 30.0%
TGAGTTCCAGCTTAAATAAT+AGG + chr2_3:40742214-40742233 None:intergenic 30.0%
GTTTATATCTTATCTTGACC+AGG - chr2_3:40742276-40742295 Msa0292000:intron 30.0%
AGTATTGTTTGGAAACTCAT+TGG - chr2_3:40742371-40742390 Msa0292000:intron 30.0%
! ACATTTCATAAAGATGGACT+TGG + chr2_3:40742459-40742478 None:intergenic 30.0%
! TTGATTTTTGATGAGAAGCA+AGG - chr2_3:40742511-40742530 Msa0292000:intron 30.0%
! GATTTTCAACCAAATTCGTT+TGG - chr2_3:40742533-40742552 Msa0292000:intron 30.0%
CAGTCATTCACAAGTTATAA+AGG - chr2_3:40742693-40742712 Msa0292000:intron 30.0%
TCCTTCATATAGGCAATTAA+GGG - chr2_3:40743020-40743039 Msa0292000:CDS 30.0%
CAATAGAAGCGGAATAAATA+AGG + chr2_3:40743086-40743105 None:intergenic 30.0%
ATGGTTAAGTTCAATAGAAG+CGG + chr2_3:40743097-40743116 None:intergenic 30.0%
TCTATTGAACTTAACCATGA+AGG - chr2_3:40743099-40743118 Msa0292000:intron 30.0%
! GGTGTGTTGTAAAATTTTGT+AGG - chr2_3:40743181-40743200 Msa0292000:CDS 30.0%
!!! AATCCTTATTTTGAGCTGTT+AGG - chr2_3:40743305-40743324 Msa0292000:five_prime_UTR 30.0%
CAAGAAAAGCAGCAATTGAT+CGG + chr2_3:40737649-40737668 None:intergenic 35.0%
TTTCTTATAATAGTGACCGG+AGG - chr2_3:40737932-40737951 Msa0292000:three_prime_UTR 35.0%
TTCTTATAATAGTGACCGGA+GGG - chr2_3:40737933-40737952 Msa0292000:three_prime_UTR 35.0%
TTAGAGAAACACATCTCATG+TGG - chr2_3:40738006-40738025 Msa0292000:intron 35.0%
! TTGTGGATTTTATCGTAAGG+AGG - chr2_3:40738039-40738058 Msa0292000:intron 35.0%
! TGTGGATTTTATCGTAAGGA+GGG - chr2_3:40738040-40738059 Msa0292000:intron 35.0%
TTTCTCTTACAAACCCACTT+GGG + chr2_3:40738256-40738275 None:intergenic 35.0%
ATGCTTTATCCCACTAAACA+GGG + chr2_3:40738374-40738393 None:intergenic 35.0%
! CATGGTTGTTGTTATTGCTT+AGG - chr2_3:40738391-40738410 Msa0292000:intron 35.0%
TTGTTAGGGGTCCAATTATT+TGG + chr2_3:40738478-40738497 None:intergenic 35.0%
! GTGACTTTTGCTTATGTTTG+AGG - chr2_3:40738762-40738781 Msa0292000:three_prime_UTR 35.0%
! ATGTTTGAGGCCATGAAATT+AGG - chr2_3:40738775-40738794 Msa0292000:three_prime_UTR 35.0%
!!! TGTTTTAAGAGAGATAAGGG+GGG - chr2_3:40738846-40738865 Msa0292000:three_prime_UTR 35.0%
! ATAGTTGAATTTGGCCTTCT+TGG - chr2_3:40738875-40738894 Msa0292000:three_prime_UTR 35.0%
ATAGATTACATCAGCCAAGA+AGG + chr2_3:40738892-40738911 None:intergenic 35.0%
! GAATCTGCTGCTGATATTTT+GGG - chr2_3:40738947-40738966 Msa0292000:three_prime_UTR 35.0%
TTTGATGCCATGCTTAACAA+GGG + chr2_3:40739007-40739026 None:intergenic 35.0%
ATTTGATGCCATGCTTAACA+AGG + chr2_3:40739008-40739027 None:intergenic 35.0%
TAGACAAGATCCAACAAACA+CGG + chr2_3:40739076-40739095 None:intergenic 35.0%
AAATTCAAAGCAGTAGCACA+AGG + chr2_3:40739145-40739164 None:intergenic 35.0%
! TTGTGCTACTGCTTTGAATT+TGG - chr2_3:40739144-40739163 Msa0292000:CDS 35.0%
GTTCGAAATATAAAAGACCG+CGG - chr2_3:40739244-40739263 Msa0292000:CDS 35.0%
! TTTTGAGCACAATTCTGTTG+AGG - chr2_3:40739305-40739324 Msa0292000:CDS 35.0%
CTAAAGCTGTACACATCTTT+AGG - chr2_3:40739427-40739446 Msa0292000:CDS 35.0%
!!! TTTTTGTTTTGTTGAGGGGA+AGG + chr2_3:40739474-40739493 None:intergenic 35.0%
TGTAGCACAAAAGCTTATAG+AGG - chr2_3:40739560-40739579 Msa0292000:CDS 35.0%
AATCTAACCCTCATGATGTT+CGG - chr2_3:40739625-40739644 Msa0292000:CDS 35.0%
!! TTAAAAGTGATGGATTCGTG+TGG - chr2_3:40739788-40739807 Msa0292000:CDS 35.0%
CTTGTTGATGCCATAATTTG+TGG - chr2_3:40739818-40739837 Msa0292000:CDS 35.0%
!!! TTCTCAATCCTTTTGGAACA+CGG + chr2_3:40739860-40739879 None:intergenic 35.0%
! CAACTATGGTTCTGTATTAG+TGG - chr2_3:40739880-40739899 Msa0292000:CDS 35.0%
! ATTAGTGGAAGCATGTAAGT+TGG - chr2_3:40739895-40739914 Msa0292000:CDS 35.0%
! GCAATCATCATATCAGGTTT+TGG - chr2_3:40739939-40739958 Msa0292000:CDS 35.0%
!!! CATATCAGGTTTTGGAAACA+AGG - chr2_3:40739947-40739966 Msa0292000:CDS 35.0%
GCAAAACAATTTCGGAAGAT+TGG + chr2_3:40740018-40740037 None:intergenic 35.0%
!! TTCCGAAATTGTTTTGCCAT+TGG - chr2_3:40740021-40740040 Msa0292000:CDS 35.0%
CTCCAATGGCAAAACAATTT+CGG + chr2_3:40740026-40740045 None:intergenic 35.0%
ACAAATATCCATGGTAAAGG+AGG - chr2_3:40740048-40740067 Msa0292000:CDS 35.0%
CAAATATCCATGGTAAAGGA+GGG - chr2_3:40740049-40740068 Msa0292000:CDS 35.0%
TCAATTATCATGTTGCTCTG+AGG - chr2_3:40740080-40740099 Msa0292000:CDS 35.0%
GATATGAAGTTCACTCTCAT+GGG + chr2_3:40740176-40740195 None:intergenic 35.0%
TGATATGAAGTTCACTCTCA+TGG + chr2_3:40740177-40740196 None:intergenic 35.0%
CTTCAAGTGTGTGTATACAT+TGG - chr2_3:40740255-40740274 Msa0292000:intron 35.0%
AAATGTGAAGCTGCAGAAAA+AGG + chr2_3:40740392-40740411 None:intergenic 35.0%
ATGCAATTCAAAAATGGTGC+CGG - chr2_3:40740416-40740435 Msa0292000:intron 35.0%
ATTAAAACAGCCCTTGATAC+TGG + chr2_3:40740481-40740500 None:intergenic 35.0%
TAATACAGATCTAGCATGTG+AGG + chr2_3:40740533-40740552 None:intergenic 35.0%
TCTGATATACTGAAGGTCAT+AGG - chr2_3:40740553-40740572 Msa0292000:CDS 35.0%
AGATGTATCATAGAAAGCAG+AGG - chr2_3:40740712-40740731 Msa0292000:intron 35.0%
GATGTATCATAGAAAGCAGA+GGG - chr2_3:40740713-40740732 Msa0292000:intron 35.0%
TGGAATACAGTTTGCAAATG+AGG + chr2_3:40740811-40740830 None:intergenic 35.0%
GCAAAGGAATGTCTAGTAAA+AGG + chr2_3:40740936-40740955 None:intergenic 35.0%
TCCTTTGCAATTTAGTAGAG+AGG - chr2_3:40740948-40740967 Msa0292000:intron 35.0%
ACCTCTCTACTAAATTGCAA+AGG + chr2_3:40740952-40740971 None:intergenic 35.0%
GATTGGGAACTCTCTTAATA+AGG - chr2_3:40741113-40741132 Msa0292000:intron 35.0%
AATAACACCATGAACACTCA+CGG + chr2_3:40741181-40741200 None:intergenic 35.0%
GTAAGATTAAAGCTGGGAAA+AGG + chr2_3:40741486-40741505 None:intergenic 35.0%
!!! GCTGGAAGTTATTTTTCGTA+TGG - chr2_3:40741522-40741541 Msa0292000:CDS 35.0%
AAGCTACTCAAGTATATGGA+AGG + chr2_3:40741646-40741665 None:intergenic 35.0%
AAGGAAGCTACTCAAGTATA+TGG + chr2_3:40741650-40741669 None:intergenic 35.0%
ATAAGAGTTGCGTTTCTGAA+AGG - chr2_3:40741708-40741727 Msa0292000:intron 35.0%
TCTGAAAGGACTGTTAAACT+TGG - chr2_3:40741722-40741741 Msa0292000:intron 35.0%
!! GCTAAATTGAATTGGCTTGT+TGG - chr2_3:40741968-40741987 Msa0292000:intron 35.0%
!! AATTGAATTGGCTTGTTGGA+TGG - chr2_3:40741972-40741991 Msa0292000:intron 35.0%
!! ATTGAATTGGCTTGTTGGAT+GGG - chr2_3:40741973-40741992 Msa0292000:intron 35.0%
ACTTTGTGAACATGCATATG+TGG + chr2_3:40742025-40742044 None:intergenic 35.0%
CACAAAGTTATATTGCAGTC+TGG - chr2_3:40742037-40742056 Msa0292000:intron 35.0%
GTCTGGATGTGATTATTTAC+AGG - chr2_3:40742054-40742073 Msa0292000:intron 35.0%
ATCTTCATCACTCGTTTATC+AGG + chr2_3:40742161-40742180 None:intergenic 35.0%
AAGGATATCCCAAACGAATT+TGG + chr2_3:40742545-40742564 None:intergenic 35.0%
ATTCAATTTGCAGCCATATG+TGG - chr2_3:40742828-40742847 Msa0292000:intron 35.0%
!!! CTGGATTTTGGAAAGTATTC+AGG - chr2_3:40742873-40742892 Msa0292000:intron 35.0%
TCTTGATTCTTCTAAGCAGT+TGG - chr2_3:40742924-40742943 Msa0292000:intron 35.0%
CTCCTTCATATAGGCAATTA+AGG - chr2_3:40743019-40743038 Msa0292000:intron 35.0%
TCCCTTAATTGCCTATATGA+AGG + chr2_3:40743024-40743043 None:intergenic 35.0%
!! TAAAGCGTTTTTCACCTTCA+TGG + chr2_3:40743116-40743135 None:intergenic 35.0%
ATGAAGGTGAAAAACGCTTT+AGG - chr2_3:40743115-40743134 Msa0292000:intron 35.0%
TAGCCTAACAGCTCAAAATA+AGG + chr2_3:40743311-40743330 None:intergenic 35.0%
GGTAACTGTTACAGTTAGTT+AGG - chr2_3:40743348-40743367 Msa0292000:five_prime_UTR 35.0%
GATTATCAACTCTCTCTCGA+CGG - chr2_3:40737320-40737339 Msa0292000:three_prime_UTR 40.0%
GGTTTAAGGAATGGAGAAGA+CGG + chr2_3:40737456-40737475 None:intergenic 40.0%
CTTCTCCATTCCTTAAACCT+TGG - chr2_3:40737457-40737476 Msa0292000:three_prime_UTR 40.0%
GTGATATATTAGTGACCGGA+GGG + chr2_3:40737804-40737823 None:intergenic 40.0%
AGTGATATATTAGTGACCGG+AGG + chr2_3:40737805-40737824 None:intergenic 40.0%
TAGCTCAGTGAAATTAGCAC+TGG - chr2_3:40738163-40738182 Msa0292000:intron 40.0%
AGCTCAGTGAAATTAGCACT+GGG - chr2_3:40738164-40738183 Msa0292000:intron 40.0%
GTTTCTCTTACAAACCCACT+TGG + chr2_3:40738257-40738276 None:intergenic 40.0%
CATGCTTTATCCCACTAAAC+AGG + chr2_3:40738375-40738394 None:intergenic 40.0%
CTGTTTAGTGGGATAAAGCA+TGG - chr2_3:40738373-40738392 Msa0292000:intron 40.0%
!! TTGCTCCCTAGTTTTTGCTA+TGG - chr2_3:40738416-40738435 Msa0292000:intron 40.0%
GCTCTCCATAGCAAAAACTA+GGG + chr2_3:40738424-40738443 None:intergenic 40.0%
ATTGGACCCCTAACAAAGAT+TGG - chr2_3:40738482-40738501 Msa0292000:intron 40.0%
! GATTGGTTATTGCTAAACGG+CGG - chr2_3:40738499-40738518 Msa0292000:intron 40.0%
! GGAATCTGCTGCTGATATTT+TGG - chr2_3:40738946-40738965 Msa0292000:three_prime_UTR 40.0%
AAATGAGCCCTTGTTAAGCA+TGG - chr2_3:40738997-40739016 Msa0292000:exon 40.0%
GTTAAGCATGGCATCAAATG+TGG - chr2_3:40739009-40739028 Msa0292000:CDS 40.0%
AACAAACACGGTTGCAATAG+TGG + chr2_3:40739064-40739083 None:intergenic 40.0%
ACTATTGCAACCGTGTTTGT+TGG - chr2_3:40739063-40739082 Msa0292000:CDS 40.0%
TGCAACTTCTACTTGATGTG+AGG + chr2_3:40739119-40739138 None:intergenic 40.0%
TCTGAGTGCTACAAGTGAAA+AGG - chr2_3:40739177-40739196 Msa0292000:CDS 40.0%
GCACAAAAGCTTATAGAGGA+TGG - chr2_3:40739564-40739583 Msa0292000:CDS 40.0%
CTCTCTCATCCCACAAATTA+TGG + chr2_3:40739831-40739850 None:intergenic 40.0%
! AGTTGGCTCAAATTACTCGT+TGG - chr2_3:40739912-40739931 Msa0292000:CDS 40.0%
! GTTGGCTCAAATTACTCGTT+GGG - chr2_3:40739913-40739932 Msa0292000:CDS 40.0%
TCTCATGGGTATAACTACAG+GGG + chr2_3:40740162-40740181 None:intergenic 40.0%
CTCTCATGGGTATAACTACA+GGG + chr2_3:40740163-40740182 None:intergenic 40.0%
ACTCTCATGGGTATAACTAC+AGG + chr2_3:40740164-40740183 None:intergenic 40.0%
! ACTTACTGATTACGTGTGCA+TGG - chr2_3:40740197-40740216 Msa0292000:CDS 40.0%
TCAGTGGTAGGAAGAAACTA+TGG + chr2_3:40740300-40740319 None:intergenic 40.0%
GCACAACATCAATGGAATGA+AGG + chr2_3:40740361-40740380 None:intergenic 40.0%
TTTCTGCAGCTTCACATTTG+TGG - chr2_3:40740393-40740412 Msa0292000:intron 40.0%
TTCAAGGTGAACCAGTATCA+AGG - chr2_3:40740467-40740486 Msa0292000:CDS 40.0%
TCAAGGTGAACCAGTATCAA+GGG - chr2_3:40740468-40740487 Msa0292000:CDS 40.0%
TATTCATGTAGAAAGGCCAG+AGG - chr2_3:40740780-40740799 Msa0292000:CDS 40.0%
!! TCCATAAAAGGTCTTGTTGC+TGG - chr2_3:40740827-40740846 Msa0292000:CDS 40.0%
! TCCAGCAACAAGACCTTTTA+TGG + chr2_3:40740831-40740850 None:intergenic 40.0%
!! AAAAGGTCTTGTTGCTGGAT+TGG - chr2_3:40740832-40740851 Msa0292000:CDS 40.0%
!! TCTTGTTGCTGGATTGGTAA+AGG - chr2_3:40740838-40740857 Msa0292000:CDS 40.0%
GAAACATACCATTTCACTCC+AGG + chr2_3:40741039-40741058 None:intergenic 40.0%
! AAGAGAGTTCCCAATCCTTT+TGG + chr2_3:40741109-40741128 None:intergenic 40.0%
TTGCGACTCATTGTAGCAAA+TGG - chr2_3:40741150-40741169 Msa0292000:intron 40.0%
TGCGACTCATTGTAGCAAAT+GGG - chr2_3:40741151-40741170 Msa0292000:intron 40.0%
CTACTAGATAGCACTTCTGA+AGG + chr2_3:40741231-40741250 None:intergenic 40.0%
TTTGCAGACAATCTCCAAAG+TGG - chr2_3:40741454-40741473 Msa0292000:intron 40.0%
TTGCAGACAATCTCCAAAGT+GGG - chr2_3:40741455-40741474 Msa0292000:intron 40.0%
ACTTCATCTCTTGATTCAGC+TGG - chr2_3:40741504-40741523 Msa0292000:CDS 40.0%
TGAACATGCATATGTGGTAC+TGG + chr2_3:40742019-40742038 None:intergenic 40.0%
! TTACAGGGTTTGTTCAGATC+AGG - chr2_3:40742070-40742089 Msa0292000:intron 40.0%
ACCTGTTCTGTGGTTGATTA+AGG - chr2_3:40742308-40742327 Msa0292000:intron 40.0%
AGTTAACAGAGCACAAGAGA+TGG + chr2_3:40742611-40742630 None:intergenic 40.0%
TAACCCACAAACAACCAGAA+GGG + chr2_3:40742786-40742805 None:intergenic 40.0%
TTAACCCACAAACAACCAGA+AGG + chr2_3:40742787-40742806 None:intergenic 40.0%
! TGGTTGTTTGTGGGTTAACA+TGG - chr2_3:40742789-40742808 Msa0292000:intron 40.0%
! AAAGTATTCAGGAAGCTTGC+TGG - chr2_3:40742884-40742903 Msa0292000:intron 40.0%
CTTCCACAAAGAGAGCTTAT+AGG + chr2_3:40742971-40742990 None:intergenic 40.0%
TAAGCTCTCTTTGTGGAAGT+TGG - chr2_3:40742972-40742991 Msa0292000:intron 40.0%
GTCTCATAGCTCCTTCATAT+AGG - chr2_3:40743010-40743029 Msa0292000:intron 40.0%
! TTTTACGGTGCAGAAGATTC+AGG - chr2_3:40743160-40743179 Msa0292000:intron 40.0%
GATTCATTCGACGGTGAAAG+CGG - chr2_3:40737363-40737382 Msa0292000:three_prime_UTR 45.0%
! TGGTGCCAAGGTTTAAGGAA+TGG + chr2_3:40737465-40737484 None:intergenic 45.0%
ATTCCTTAAACCTTGGCACC+AGG - chr2_3:40737464-40737483 Msa0292000:three_prime_UTR 45.0%
CTTAACCATGGTATGACGTG+TGG + chr2_3:40737696-40737715 None:intergenic 45.0%
CACACGTCATACCATGGTTA+AGG - chr2_3:40737694-40737713 Msa0292000:three_prime_UTR 45.0%
ATGTTGTGTTGTACACCCTC+CGG - chr2_3:40737786-40737805 Msa0292000:three_prime_UTR 45.0%
GGTCAAATCGCTAGAAGTAG+AGG - chr2_3:40738080-40738099 Msa0292000:intron 45.0%
GAATCGAACTTGAGACCATC+AGG - chr2_3:40738188-40738207 Msa0292000:intron 45.0%
TCTTACAAACCCACTTGGGT+TGG + chr2_3:40738252-40738271 None:intergenic 45.0%
ATATAGCCAGCCCTGTTTAG+TGG - chr2_3:40738361-40738380 Msa0292000:intron 45.0%
TATAGCCAGCCCTGTTTAGT+GGG - chr2_3:40738362-40738381 Msa0292000:intron 45.0%
TTTATCCCACTAAACAGGGC+TGG + chr2_3:40738370-40738389 None:intergenic 45.0%
GGCTCTCCATAGCAAAAACT+AGG + chr2_3:40738425-40738444 None:intergenic 45.0%
! TTTGCTATGGAGAGCCTAAC+TGG - chr2_3:40738429-40738448 Msa0292000:intron 45.0%
TTGCTATGGAGAGCCTAACT+GGG - chr2_3:40738430-40738449 Msa0292000:intron 45.0%
TACTTGATGTGAGGACAGCA+AGG + chr2_3:40739110-40739129 None:intergenic 45.0%
ATTCAATCTTCTGTGCACCG+CGG + chr2_3:40739264-40739283 None:intergenic 45.0%
TGAGCACAATTCTGTTGAGG+TGG - chr2_3:40739308-40739327 Msa0292000:CDS 45.0%
CAAACAGGGAACCTAGATGA+AGG + chr2_3:40739334-40739353 None:intergenic 45.0%
GTTGAGGGGAAGGTAAAAGA+TGG + chr2_3:40739464-40739483 None:intergenic 45.0%
ACAAATGATTGTGCAGGCGA+TGG - chr2_3:40739599-40739618 Msa0292000:CDS 45.0%
CAAATGATTGTGCAGGCGAT+GGG - chr2_3:40739600-40739619 Msa0292000:CDS 45.0%
CCTCTATCCGAACATCATGA+GGG + chr2_3:40739635-40739654 None:intergenic 45.0%
CCTCATGATGTTCGGATAGA+GGG - chr2_3:40739633-40739652 Msa0292000:CDS 45.0%
CTCATGATGTTCGGATAGAG+GGG - chr2_3:40739634-40739653 Msa0292000:CDS 45.0%
ATGTTCGGATAGAGGGGTTT+CGG - chr2_3:40739640-40739659 Msa0292000:CDS 45.0%
! TCGGCTTGCTCAATGTCTAT+TGG - chr2_3:40739659-40739678 Msa0292000:CDS 45.0%
ATTTGTGGGATGAGAGAGAC+AGG - chr2_3:40739833-40739852 Msa0292000:CDS 45.0%
TTTGTGGGATGAGAGAGACA+GGG - chr2_3:40739834-40739853 Msa0292000:CDS 45.0%
TTTCAGTCCCTCCTTTACCA+TGG + chr2_3:40740059-40740078 None:intergenic 45.0%
!! TTGCTCTGAGGAGTTATGTG+TGG - chr2_3:40740092-40740111 Msa0292000:CDS 45.0%
!! TGCTCTGAGGAGTTATGTGT+GGG - chr2_3:40740093-40740112 Msa0292000:CDS 45.0%
AGTTATGTGTGGGACGTTCT+TGG - chr2_3:40740103-40740122 Msa0292000:CDS 45.0%
GTTATGTGTGGGACGTTCTT+GGG - chr2_3:40740104-40740123 Msa0292000:CDS 45.0%
GGGTGGCTTACAATTCATTG+TGG - chr2_3:40740124-40740143 Msa0292000:CDS 45.0%
!! CTGGATTGGTAAAGGAGACT+GGG - chr2_3:40740846-40740865 Msa0292000:CDS 45.0%
ATTGGTAAAGGAGACTGGGA+AGG - chr2_3:40740850-40740869 Msa0292000:CDS 45.0%
TTTCACTCCAGGACTGAAAG+AGG + chr2_3:40741028-40741047 None:intergenic 45.0%
CTTTCAGTCCTGGAGTGAAA+TGG - chr2_3:40741028-40741047 Msa0292000:CDS 45.0%
GCGACTCATTGTAGCAAATG+GGG - chr2_3:40741152-40741171 Msa0292000:intron 45.0%
! ACTTCTGAAGGTAGAAGTGC+TGG + chr2_3:40741219-40741238 None:intergenic 45.0%
! CTGCAAAGCATTTGCAAGAG+AGG + chr2_3:40741441-40741460 None:intergenic 45.0%
TGCAGACAATCTCCAAAGTG+GGG - chr2_3:40741456-40741475 Msa0292000:intron 45.0%
TCAGATCAGGAATGCAAGAG+AGG - chr2_3:40742083-40742102 Msa0292000:intron 45.0%
AGAACAGGTTACATAGACCC+TGG + chr2_3:40742297-40742316 None:intergenic 45.0%
GGTCTATGTAACCTGTTCTG+TGG - chr2_3:40742298-40742317 Msa0292000:intron 45.0%
GCCTTAATCAACCACAGAAC+AGG + chr2_3:40742312-40742331 None:intergenic 45.0%
AGAATTGGCTGAAAGCTAGC+TGG - chr2_3:40742431-40742450 Msa0292000:intron 45.0%
AAACAACCAGAAGGGGGATT+TGG + chr2_3:40742778-40742797 None:intergenic 45.0%
AACCCACAAACAACCAGAAG+GGG + chr2_3:40742785-40742804 None:intergenic 45.0%
! AGCCATATGTGGAGCTTTGT+TGG - chr2_3:40742839-40742858 Msa0292000:intron 45.0%
AGCCAACAAAGCTCCACATA+TGG + chr2_3:40742844-40742863 None:intergenic 45.0%
!! TATGTGGAGCTTTGTTGGCT+TGG - chr2_3:40742844-40742863 Msa0292000:intron 45.0%
!! TTTGTTGGCTTGGTGAGTTC+TGG - chr2_3:40742854-40742873 Msa0292000:intron 45.0%
!!! GCTTGGTGAGTTCTGGATTT+TGG - chr2_3:40742861-40742880 Msa0292000:intron 45.0%
TGGCCTATAAGCTCTCTTTG+TGG - chr2_3:40742965-40742984 Msa0292000:intron 45.0%
TTCTGCAAAGTCCTGTCAGT+AGG - chr2_3:40743387-40743406 Msa0292000:five_prime_UTR 45.0%
! TTTTCTTGCAGCCTACTGAC+AGG + chr2_3:40743401-40743420 None:intergenic 45.0%
AGTAGGCTGCAAGAAAAGCT+TGG - chr2_3:40743404-40743423 Msa0292000:five_prime_UTR 45.0%
GTAGGCTGCAAGAAAAGCTT+GGG - chr2_3:40743405-40743424 Msa0292000:five_prime_UTR 45.0%
!! TATGATATAAAAAAAAAAAT+TGG - chr2_3:40737247-40737266 Msa0292000:three_prime_UTR 5.0%
ATGGAGAAGACGGCGATGAA+GGG + chr2_3:40737446-40737465 None:intergenic 50.0%
AATGGAGAAGACGGCGATGA+AGG + chr2_3:40737447-40737466 None:intergenic 50.0%
! AGACCTGGTGCCAAGGTTTA+AGG + chr2_3:40737470-40737489 None:intergenic 50.0%
CGTATCACACATACACCCTC+CGG + chr2_3:40737951-40737970 None:intergenic 50.0%
CATGTGGTCTCGACATGTTG+TGG - chr2_3:40738022-40738041 Msa0292000:intron 50.0%
TCGAACTTGAGACCATCAGG+AGG - chr2_3:40738191-40738210 Msa0292000:intron 50.0%
ATAGAGTGAGCTCCTCCTGA+TGG + chr2_3:40738206-40738225 None:intergenic 50.0%
ATCAGGAGGAGCTCACTCTA+TGG - chr2_3:40738205-40738224 Msa0292000:intron 50.0%
! TGGCTGGGAGATGTTAGCTT+GGG + chr2_3:40738232-40738251 None:intergenic 50.0%
TTGGCTGGGAGATGTTAGCT+TGG + chr2_3:40738233-40738252 None:intergenic 50.0%
!! CACGGTTGCAATAGTGGACT+CGG + chr2_3:40739058-40739077 None:intergenic 50.0%
TGTTGAGGTGGCCTTCATCT+AGG - chr2_3:40739320-40739339 Msa0292000:CDS 50.0%
CCCTCATGATGTTCGGATAG+AGG - chr2_3:40739632-40739651 Msa0292000:CDS 50.0%
CCCTCTATCCGAACATCATG+AGG + chr2_3:40739636-40739655 None:intergenic 50.0%
GCTCAAATTACTCGTTGGGC+TGG - chr2_3:40739917-40739936 Msa0292000:CDS 50.0%
! GGGCTGGCAATCATCATATC+AGG - chr2_3:40739933-40739952 Msa0292000:CDS 50.0%
TGCAAATGAGGAGCAACCTC+TGG + chr2_3:40740799-40740818 None:intergenic 50.0%
!! GCTGGATTGGTAAAGGAGAC+TGG - chr2_3:40740845-40740864 Msa0292000:CDS 50.0%
AGTAGCACCTCTTTCAGTCC+TGG - chr2_3:40741018-40741037 Msa0292000:CDS 50.0%
AGGGGGATTTGGAAGCTCAT+CGG + chr2_3:40742767-40742786 None:intergenic 50.0%
! ATCCCCCTTCTGGTTGTTTG+TGG - chr2_3:40742779-40742798 Msa0292000:intron 50.0%
! TCCCCCTTCTGGTTGTTTGT+GGG - chr2_3:40742780-40742799 Msa0292000:intron 50.0%
ACCCACAAACAACCAGAAGG+GGG + chr2_3:40742784-40742803 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGACC+TGG + chr2_3:40737485-40737504 None:intergenic 55.0%
CGTAAGGAGGGTAGACCAGA+TGG - chr2_3:40738052-40738071 Msa0292000:intron 55.0%
AAGGAGGGTAGACCAGATGG+AGG - chr2_3:40738055-40738074 Msa0292000:intron 55.0%
AGGAGGGTAGACCAGATGGA+GGG - chr2_3:40738056-40738075 Msa0292000:intron 55.0%
CGATTTGACCACCCTCCATC+TGG + chr2_3:40738070-40738089 None:intergenic 55.0%
ATCTCCCAGCCAACCCAAGT+GGG - chr2_3:40738240-40738259 Msa0292000:intron 55.0%
!! CAAACCCACTTGGGTTGGCT+GGG + chr2_3:40738247-40738266 None:intergenic 55.0%
!! ACAAACCCACTTGGGTTGGC+TGG + chr2_3:40738248-40738267 None:intergenic 55.0%
TATGGAGAGCCTAACTGGGC+AGG - chr2_3:40738434-40738453 Msa0292000:intron 55.0%
ATGGAGAGCCTAACTGGGCA+GGG - chr2_3:40738435-40738454 Msa0292000:intron 55.0%
AAGGTTCTCCCTGCCCAGTT+AGG + chr2_3:40738446-40738465 None:intergenic 55.0%
AGACAGGGCCGTGTTCCAAA+AGG - chr2_3:40739849-40739868 Msa0292000:CDS 55.0%
ATGTGTGGGACGTTCTTGGG+TGG - chr2_3:40740107-40740126 Msa0292000:CDS 55.0%
GGGGATTCCGTGAGTGTTCA+TGG - chr2_3:40741171-40741190 Msa0292000:intron 55.0%
! GGAAAAGGTGTGCCCCACTT+TGG + chr2_3:40741471-40741490 None:intergenic 55.0%
GAGCTTCCAAATCCCCCTTC+TGG - chr2_3:40742769-40742788 Msa0292000:intron 55.0%
! GAGAGAGAGACCTGGTGCCA+AGG + chr2_3:40737477-40737496 None:intergenic 60.0%
TCGCGCCACACGTCATACCA+TGG - chr2_3:40737688-40737707 Msa0292000:three_prime_UTR 60.0%
AGGGTAGACCAGATGGAGGG+TGG - chr2_3:40738059-40738078 Msa0292000:intron 60.0%
CATCTCCCAGCCAACCCAAG+TGG - chr2_3:40738239-40738258 Msa0292000:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 40737208 40743452 40737208 ID=Msa0292000;Name=Msa0292000
chr2_3 mRNA 40737208 40743452 40737208 ID=Msa0292000-mRNA-1;Parent=Msa0292000;Name=Msa0292000-mRNA-1;_AED=0.07;_eAED=0.07;_QI=153|0.44|0.4|1|0.55|0.4|10|1199|821
chr2_3 exon 40737208 40737964 40737208 ID=Msa0292000-mRNA-1:exon:13123;Parent=Msa0292000-mRNA-1
chr2_3 exon 40738556 40740258 40738556 ID=Msa0292000-mRNA-1:exon:13122;Parent=Msa0292000-mRNA-1
chr2_3 exon 40740451 40740593 40740451 ID=Msa0292000-mRNA-1:exon:13121;Parent=Msa0292000-mRNA-1
chr2_3 exon 40740600 40740705 40740600 ID=Msa0292000-mRNA-1:exon:13120;Parent=Msa0292000-mRNA-1
chr2_3 exon 40740748 40740890 40740748 ID=Msa0292000-mRNA-1:exon:13119;Parent=Msa0292000-mRNA-1
chr2_3 exon 40740980 40741113 40740980 ID=Msa0292000-mRNA-1:exon:13118;Parent=Msa0292000-mRNA-1
chr2_3 exon 40741212 40741457 40741212 ID=Msa0292000-mRNA-1:exon:13117;Parent=Msa0292000-mRNA-1
chr2_3 exon 40741470 40741713 40741470 ID=Msa0292000-mRNA-1:exon:13116;Parent=Msa0292000-mRNA-1
chr2_3 exon 40743020 40743083 40743020 ID=Msa0292000-mRNA-1:exon:13115;Parent=Msa0292000-mRNA-1
chr2_3 exon 40743175 40743452 40743175 ID=Msa0292000-mRNA-1:exon:13114;Parent=Msa0292000-mRNA-1
chr2_3 five_prime_UTR 40743300 40743452 40743300 ID=Msa0292000-mRNA-1:five_prime_utr;Parent=Msa0292000-mRNA-1
chr2_3 CDS 40743175 40743299 40743175 ID=Msa0292000-mRNA-1:cds;Parent=Msa0292000-mRNA-1
chr2_3 CDS 40743020 40743083 40743020 ID=Msa0292000-mRNA-1:cds;Parent=Msa0292000-mRNA-1
chr2_3 CDS 40741470 40741713 40741470 ID=Msa0292000-mRNA-1:cds;Parent=Msa0292000-mRNA-1
chr2_3 CDS 40741212 40741457 40741212 ID=Msa0292000-mRNA-1:cds;Parent=Msa0292000-mRNA-1
chr2_3 CDS 40740980 40741113 40740980 ID=Msa0292000-mRNA-1:cds;Parent=Msa0292000-mRNA-1
chr2_3 CDS 40740748 40740890 40740748 ID=Msa0292000-mRNA-1:cds;Parent=Msa0292000-mRNA-1
chr2_3 CDS 40740600 40740705 40740600 ID=Msa0292000-mRNA-1:cds;Parent=Msa0292000-mRNA-1
chr2_3 CDS 40740451 40740593 40740451 ID=Msa0292000-mRNA-1:cds;Parent=Msa0292000-mRNA-1
chr2_3 CDS 40738998 40740258 40738998 ID=Msa0292000-mRNA-1:cds;Parent=Msa0292000-mRNA-1
chr2_3 three_prime_UTR 40738556 40738997 40738556 ID=Msa0292000-mRNA-1:three_prime_utr;Parent=Msa0292000-mRNA-1
chr2_3 three_prime_UTR 40737208 40737964 40737208 ID=Msa0292000-mRNA-1:three_prime_utr;Parent=Msa0292000-mRNA-1
Gene Sequence

>Msa0292000

ATGATTCATTCGACGGTGAAAGCGGCAACTGCAAAAGAAAAAGAAAAAGATAACGATCGGAGCTTGAGTTCTCACATCATCACCCTTCATCGCCGTCTTCTCCATTCCTTAAACCTTGGCACCAGATATTTTGATGAAAAGACAAATAGATGGAAGTGGCAGTGCGTCAACATTGAAGTACAGAAAAATGAATCTGCTGCTGATATTTTGGGAGCATTGTTATGGATTCTTCAATGCAAAAATGAGCCCTTGTTAAGCATGGCATCAAATGTGGCAGTGAAATTAGTTAGTATTTTACCGAGTCCACTATTGCAACCGTGTTTGTTGGATCTTGTCTATTATTTATCGTCCTTGCTGTCCTCACATCAAGTAGAAGTTGCAATACCTTGTGCTACTGCTTTGAATTTGGTAATCTCAAATCTGAGTGCTACAATTATTGAAGCACTGAAAGAAACAGAGATTTCCATTTGCATTGTTCGAAATATAAAAGACCGCGGTGCACAGAAGATTGAATATTTTGTGGAGATGGCTTCACTTTTGAGCACAATTCTGTTGAGGTGGCCTTCATCTAGGTTCCCTGTTTGTAATGATGTTGAACTTATGAAAGTTTTAGCAAACATGCTTACAAGTACAGATAGTTCTATTAAACTTGTTCTTCTAAAGCTGTACACATCTTTAGCTTTATGTGATTCTGTAGCACAAAAGCTTATAGAGGATGGAAAAGTATTTCTACAAATGATTGTGCAGGCGATGGGAAAATCTAACCCTCATGATGTTCGGATAGAGGGGTTTCGGCTTGCTCAATGTCTATTGAGATCCCAAGAAAATTGTTTAAAAGTGATGGATTCGTGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGAGAGAGACAGGGCCGTGTTCCAAAAGGATTGAGAACAACTATGGTTCTGTATTAGTGGAAGCATGTAAGTTTTGGAAACAAGGAATTGATAAAGTCCTCCTTAATCTTCTAATTGAAAATATTCATGACCAATCTTCCGAAATTGTTTTGCCATTGGAGAAACAAATATCCATGGAGGGACTGAAACTCAATTATCATGTTGCTCTGAGGAGTTATGTGTGGGACGTTCTTGGGTGGCTTACAATTCATTGTGGAGAAAATTCAAACCCCTGTAGTTATACCCATGAGAGTGAACTTCATATCAACTTACTGATTACCTTCACATTTGTGGATGCAATTCAAAAATGGTGCCGGATATATCAAAATGATGCTGATGATAATTTTCAAGGTGAACCAGTATCAAGGGCTGTTTTAATGATGATATATTCTCCATGTAATTATATTTCCTCACATGCTAGATCTGTATTATCTGATATACTGAAGGTCATAGGCGATGTGTACTTGAAAAACTCACTACATACCCTAGATTATATATTATCCCTGAAAAGTTATTGTTCATATGATAAACTCCAACTTGTTATTAACTTAATTGGGTTAACTTGTCTTTCAAGTTTACCACAGTATCAAAGATGTATCATAGAAAGCAGAGGGTTAAAGACTGTTTTTCTTCTGGTGCAACGATGCTTAAGTAATGATATTCATGTAGAAAGGCCAGAGGTTGCTCCTCATTTGCAAACTGTATTCCATAAAAGGTCTTGTTGCTGGATTGGTAAAGGAGACTGGGAAGGTTCCAATGTTGTCTTATTTTATGGTATGTGGGGCTTAGCTGAATTTCTTCATCAGTGTAGCCTTTTACTAGACATTCCTTTGCAATTTAGTAGAGAGGTGACAAACATTAAAACTCAGTTAGTTAACAAACTTAATGAGATCTGTAGTAGCACCTCTTTCAGTCCTGGAGTGAAATGGTATGTTTCTTATATTCTAAGTTATTTTGGATTTTATGGTTTCCCAAATGAATTTTCCAAAAGGATTGGGAACTCTCTTAATAAGGAAGAATATGCAGATTTGCGACTCATTGTAGCAAATGGGGATTCCGTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCAGCACTTCTACCTTCAGAAGTGCTATCTAGTAGTAAGAGTTCTAAAGAAATAACAGATTGTTTTGTTGGAGAGACTGTGAGAGAAGTTCGTTATTCTTCTCATGTTGATTATGAAGCATTGATGTTATTGTTGGAATATGTATATTTGGGAGGCTTGCATGCAGCAGAAGAAGAAGCTGTAAAGAAGCTCAAAGTTCTTGCTAAGCGTTGTAATGTAAAGCCTCTCTTGCAAATGCTTTGCAGACAATCTCCAAAGTGGGGCACACCTTTTCCCAGCTTTAATCTTACTTCATCTCTTGATTCAGCTGGAAGTTATTTTTCGTATGGTTTGCTTCTTGACCAGATTCTTCTAGATATCTATAGGTTTCATGTGATTTGTGACATTGTGTTCTGTTGTTCATCCATGTTTATTTCCATATTTATTTCCTTCCATATACTTGAGTAG
Protein sequence

>Msa0292000

MIHSTVKAATAKEKEKDNDRSLSSHIITLHRRLLHSLNLGTRYFDEKTNRWKWQCVNIEVQKNESAADILGALLWILQCKNEPLLSMASNVAVKLVSILPSPLLQPCLLDLVYYLSSLLSSHQVEVAIPCATALNLVISNLSATIIEALKETEISICIVRNIKDRGAQKIEYFVEMASLLSTILLRWPSSRFPVCNDVELMKVLANMLTSTDSSIKLVLLKLYTSLALCDSVAQKLIEDGKVFLQMIVQAMGKSNPHDVRIEGFRLAQCLLRSQENCLKVMDSCGEALVDAIICGMRETGPCSKRIENNYGSVLVEACKFWKQGIDKVLLNLLIENIHDQSSEIVLPLEKQISMEGLKLNYHVALRSYVWDVLGWLTIHCGENSNPCSYTHESELHINLLITFTFVDAIQKWCRIYQNDADDNFQGEPVSRAVLMMIYSPCNYISSHARSVLSDILKVIGDVYLKNSLHTLDYILSLKSYCSYDKLQLVINLIGLTCLSSLPQYQRCIIESRGLKTVFLLVQRCLSNDIHVERPEVAPHLQTVFHKRSCCWIGKGDWEGSNVVLFYGMWGLAEFLHQCSLLLDIPLQFSREVTNIKTQLVNKLNEICSSTSFSPGVKWYVSYILSYFGFYGFPNEFSKRIGNSLNKEEYADLRLIVANGDSVSVHGVILAVRCPALLPSEVLSSSKSSKEITDCFVGETVREVRYSSHVDYEALMLLLEYVYLGGLHAAEEEAVKKLKVLAKRCNVKPLLQMLCRQSPKWGTPFPSFNLTSSLDSAGSYFSYGLLLDQILLDIYRFHVICDIVFCCSSMFISIFISFHILE*