Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0266620 | XP_013464310.1 | 88.772 | 1042 | 58 | 6 | 1 | 998 | 1 | 1027 | 0.0 | 1832 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0266620 | sp|P93820|Y1439_ARATH | 41.986 | 1017 | 519 | 12 | 23 | 993 | 10 | 1001 | 0.0 | 745 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0266620 | A0A072VJP6 | 88.772 | 1042 | 58 | 6 | 1 | 998 | 1 | 1027 | 0.0 | 1832 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0266620 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0114820 | Msa0266620 | 0.905942 | 2.515400e-80 | -8.615850e-47 |
| Msa0266620 | Msa0292000 | 0.893976 | 3.802529e-75 | -8.615850e-47 |
| Msa0266620 | Msa1415740 | 0.932561 | 7.081526e-95 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0266620 | MtrunA17_Chr2g0312161 | 88.772 | 1042 | 58 | 6 | 1 | 998 | 1 | 1027 | 0.0 | 1832 |
| Msa0266620 | MtrunA17_Chr2g0319221 | 60.227 | 88 | 31 | 1 | 1 | 88 | 1 | 84 | 8.01e-23 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0266620 | AT1G04390.1 | 41.986 | 1017 | 519 | 12 | 23 | 993 | 10 | 1001 | 0.0 | 745 |
Find 191 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATCTGCTGCTGATATTT+TGG | 0.141395 | 2_2:-67352421 | Msa0266620:CDS |
| TCTTATATTCTAAGTTATTT+TGG | 0.154673 | 2_2:-67350313 | Msa0266620:CDS |
| CTCCTTCATATAGGCAATTA+AGG | 0.156017 | 2_2:-67348351 | Msa0266620:CDS |
| GCTTGGTGAGTTCTGGATTT+TGG | 0.177722 | 2_2:-67348509 | Msa0266620:CDS |
| TGCAAACTGTATTCCATAAA+AGG | 0.232443 | 2_2:-67350555 | Msa0266620:CDS |
| AGACCTGGTGCCAAGGTTTA+AGG | 0.234948 | 2_2:+67353874 | None:intergenic |
| CTCTCTCATCCCACAAATTA+TGG | 0.241887 | 2_2:+67351541 | None:intergenic |
| CTAAAGCTGTACACATCTTT+AGG | 0.249325 | 2_2:-67351940 | Msa0266620:intron |
| ATTGTTGGAATATGTATATT+TGG | 0.255950 | 2_2:-67350026 | Msa0266620:CDS |
| TTGTGCTACTGCTTTGAATT+TGG | 0.257052 | 2_2:-67352223 | Msa0266620:CDS |
| TTTGTTGGCTTGGTGAGTTC+TGG | 0.258921 | 2_2:-67348516 | Msa0266620:CDS |
| GCTATGTTACAGTTTATATT+AGG | 0.264244 | 2_2:-67348043 | Msa0266620:three_prime_UTR |
| GCAAAGGAATGTCTAGTAAA+AGG | 0.277394 | 2_2:+67350437 | None:intergenic |
| AAGAGAGTTCCCAATCCTTT+TGG | 0.277839 | 2_2:+67350264 | None:intergenic |
| CTCCAATGGCAAAACAATTT+CGG | 0.283584 | 2_2:+67351346 | None:intergenic |
| GGCAATTAAAATAATCAAAA+TGG | 0.286723 | 2_2:-67348425 | Msa0266620:CDS |
| GTCTGGATGTGATTATTTAC+AGG | 0.297365 | 2_2:-67349316 | Msa0266620:CDS |
| ATAGTTGTTCTCAATCCTTT+TGG | 0.298736 | 2_2:+67351505 | None:intergenic |
| GCAATCATCATATCAGGTTT+TGG | 0.308467 | 2_2:-67351430 | Msa0266620:CDS |
| TCCATAAAAGGTCTTGTTGC+TGG | 0.312735 | 2_2:-67350543 | Msa0266620:CDS |
| TTGTTGGAATATGTATATTT+GGG | 0.319518 | 2_2:-67350025 | Msa0266620:CDS |
| CAGTCATTCACAAGTTATAA+AGG | 0.319849 | 2_2:-67348677 | Msa0266620:CDS |
| GGTAACTGTTACAGTTAGTT+AGG | 0.324663 | 2_2:-67348022 | Msa0266620:three_prime_UTR |
| CTTCCACAAAGAGAGCTTAT+AGG | 0.328839 | 2_2:+67348402 | None:intergenic |
| TTTCTGCAGCTTCACATTTG+TGG | 0.335071 | 2_2:-67350976 | Msa0266620:intron |
| TAGCCTAACAGCTCAAAATA+AGG | 0.350134 | 2_2:+67348062 | None:intergenic |
| GATTGGGAACTCTCTTAATA+AGG | 0.355453 | 2_2:-67350257 | Msa0266620:CDS |
| AAAAGGATTGAGAACAACTA+TGG | 0.357983 | 2_2:-67351503 | Msa0266620:CDS |
| TGTTGAGGTGGCCTTCATCT+AGG | 0.358318 | 2_2:-67352047 | Msa0266620:CDS |
| GCAAAACAATTTCGGAAGAT+TGG | 0.358748 | 2_2:+67351354 | None:intergenic |
| ATTAAAACAGCCCTTGATAC+TGG | 0.361067 | 2_2:+67350891 | None:intergenic |
| TGAAGCATTGATGTTATTGT+TGG | 0.363458 | 2_2:-67350041 | Msa0266620:CDS |
| TAATGGAAGCTAAATTGAAT+TGG | 0.363985 | 2_2:-67349410 | Msa0266620:CDS |
| ATGTTCGGATAGAGGGGTTT+CGG | 0.364447 | 2_2:-67351727 | Msa0266620:CDS |
| CAATAGAAGCGGAATAAATA+AGG | 0.367946 | 2_2:+67348287 | None:intergenic |
| GGGCTGGCAATCATCATATC+AGG | 0.369992 | 2_2:-67351436 | Msa0266620:CDS |
| AGATTCTTCTAGATATCTAT+AGG | 0.370144 | 2_2:-67349811 | Msa0266620:intron |
| TTGCGACTCATTGTAGCAAA+TGG | 0.377835 | 2_2:-67350220 | Msa0266620:CDS |
| TCGGCTTGCTCAATGTCTAT+TGG | 0.377904 | 2_2:-67351708 | Msa0266620:intron |
| AAAGTATTCAGGAAGCTTGC+TGG | 0.379435 | 2_2:-67348486 | Msa0266620:CDS |
| TCCTTCATATAGGCAATTAA+GGG | 0.380231 | 2_2:-67348350 | Msa0266620:CDS |
| AGTTATGTGTGGGACGTTCT+TGG | 0.385008 | 2_2:-67351266 | Msa0266620:CDS |
| AACAAACACGGTTGCAATAG+TGG | 0.393093 | 2_2:+67352306 | None:intergenic |
| AGAAAATTGTTTAAAAGTGA+TGG | 0.395093 | 2_2:-67351591 | Msa0266620:CDS |
| GCTAAATTGAATTGGCTTGT+TGG | 0.400345 | 2_2:-67349402 | Msa0266620:CDS |
| TTGATGAAAAGACAAATAGA+TGG | 0.406878 | 2_2:-67353783 | Msa0266620:CDS |
| AAAAGGTCTTGTTGCTGGAT+TGG | 0.407271 | 2_2:-67350538 | Msa0266620:CDS |
| TATGTGGAGCTTTGTTGGCT+TGG | 0.408026 | 2_2:-67348526 | Msa0266620:CDS |
| AGTTCAACATCATTACAAAC+AGG | 0.413790 | 2_2:+67352021 | None:intergenic |
| ACTATTGCAACCGTGTTTGT+TGG | 0.414256 | 2_2:-67352304 | Msa0266620:CDS |
| TTATAAAGGTTGATATTAGC+TGG | 0.423730 | 2_2:-67348663 | Msa0266620:CDS |
| CTTCTCCATTCCTTAAACCT+TGG | 0.423873 | 2_2:-67353884 | Msa0266620:CDS |
| CAACTATGGTTCTGTATTAG+TGG | 0.423956 | 2_2:-67351489 | Msa0266620:CDS |
| TGCGACTCATTGTAGCAAAT+GGG | 0.425092 | 2_2:-67350219 | Msa0266620:CDS |
| AGCCATATGTGGAGCTTTGT+TGG | 0.425519 | 2_2:-67348531 | Msa0266620:CDS |
| TATAGATATCTAGAAGAATC+TGG | 0.427973 | 2_2:+67349813 | None:intergenic |
| CCCTCATGATGTTCGGATAG+AGG | 0.430203 | 2_2:-67351735 | Msa0266620:CDS |
| TTACAGGGTTTGTTCAGATC+AGG | 0.430822 | 2_2:-67349300 | Msa0266620:CDS |
| GGGGATTCCGTGAGTGTTCA+TGG | 0.433973 | 2_2:-67350199 | Msa0266620:CDS |
| TGGAATACAGTTTGCAAATG+AGG | 0.436839 | 2_2:+67350562 | None:intergenic |
| GTTGGCTCAAATTACTCGTT+GGG | 0.438476 | 2_2:-67351456 | Msa0266620:CDS |
| TTGTTGATGCCATAATTTGT+GGG | 0.444369 | 2_2:-67351550 | Msa0266620:CDS |
| GTTATGTGTGGGACGTTCTT+GGG | 0.450565 | 2_2:-67351265 | Msa0266620:CDS |
| TATATTTCGAACAATGCAAA+TGG | 0.452695 | 2_2:+67352134 | None:intergenic |
| TAAGCTCTCTTTGTGGAAGT+TGG | 0.457752 | 2_2:-67348398 | Msa0266620:CDS |
| TGCAAATGAGGAGCAACCTC+TGG | 0.459121 | 2_2:+67350574 | None:intergenic |
| TTCAAGGTGAACCAGTATCA+AGG | 0.459159 | 2_2:-67350902 | Msa0266620:CDS |
| CACACGTCATACCATGGTTA+AGG | 0.460640 | 2_2:-67353671 | Msa0266620:intron |
| AGATGAAGTAAGATTAAAGC+TGG | 0.462284 | 2_2:+67349880 | None:intergenic |
| ACTTCATCTCTTGATTCAGC+TGG | 0.463446 | 2_2:-67349866 | Msa0266620:CDS |
| CTTTCAGTCCTGGAGTGAAA+TGG | 0.463586 | 2_2:-67350342 | Msa0266620:CDS |
| CCTCATGATGTTCGGATAGA+GGG | 0.466662 | 2_2:-67351734 | Msa0266620:CDS |
| CACAAAGTTATATTGCAGTC+TGG | 0.467245 | 2_2:-67349333 | Msa0266620:CDS |
| ACTCTCATGGGTATAACTAC+AGG | 0.470412 | 2_2:+67351208 | None:intergenic |
| CTGCAAAGCATTTGCAAGAG+AGG | 0.471231 | 2_2:+67349932 | None:intergenic |
| AATGGAGAAGACGGCGATGA+AGG | 0.471770 | 2_2:+67353897 | None:intergenic |
| TGATATGAAGTTCACTCTCA+TGG | 0.474270 | 2_2:+67351195 | None:intergenic |
| ATGGATATTTGTTTCTCCAA+TGG | 0.474322 | 2_2:+67351332 | None:intergenic |
| AATTGAATTGGCTTGTTGGA+TGG | 0.479401 | 2_2:-67349398 | Msa0266620:CDS |
| TCTTGATTCTTCTAAGCAGT+TGG | 0.480319 | 2_2:-67348446 | Msa0266620:CDS |
| GTAAGATTAAAGCTGGGAAA+AGG | 0.480512 | 2_2:+67349887 | None:intergenic |
| AGCCAACAAAGCTCCACATA+TGG | 0.482790 | 2_2:+67348529 | None:intergenic |
| AATCTAACCCTCATGATGTT+CGG | 0.483450 | 2_2:-67351742 | Msa0266620:CDS |
| GGAAAAGGTGTGCCCCACTT+TGG | 0.488293 | 2_2:+67349902 | None:intergenic |
| AGTAGCACCTCTTTCAGTCC+TGG | 0.489560 | 2_2:-67350352 | Msa0266620:CDS |
| ATTTGTGGGATGAGAGAGAC+AGG | 0.492475 | 2_2:-67351536 | Msa0266620:CDS |
| TGGTTGTTTGTGGGTTAACA+TGG | 0.493074 | 2_2:-67348581 | Msa0266620:CDS |
| TGAACATGCATATGTGGTAC+TGG | 0.495754 | 2_2:+67349354 | None:intergenic |
| ATTCAATTTGCAGCCATATG+TGG | 0.496585 | 2_2:-67348542 | Msa0266620:CDS |
| TATAAAGGTTGATATTAGCT+GGG | 0.501910 | 2_2:-67348662 | Msa0266620:CDS |
| ATTCCTTAAACCTTGGCACC+AGG | 0.502270 | 2_2:-67353877 | Msa0266620:intron |
| GTCTCATAGCTCCTTCATAT+AGG | 0.503354 | 2_2:-67348360 | Msa0266620:CDS |
| ACAAATGATTGTGCAGGCGA+TGG | 0.504540 | 2_2:-67351768 | Msa0266620:CDS |
| GTAGGCTGCAAGAAAAGCTT+GGG | 0.508267 | 2_2:-67347965 | Msa0266620:three_prime_UTR |
| CATTGATTAAACTAGTACAT+TGG | 0.512817 | 2_2:-67348636 | Msa0266620:CDS |
| CTCTCATGGGTATAACTACA+GGG | 0.512953 | 2_2:+67351209 | None:intergenic |
| ATTGAATTGGCTTGTTGGAT+GGG | 0.513309 | 2_2:-67349397 | Msa0266620:CDS |
| TGGCCTATAAGCTCTCTTTG+TGG | 0.514178 | 2_2:-67348405 | Msa0266620:CDS |
| GAAACAAATATCCATGGTAA+AGG | 0.514701 | 2_2:-67351324 | Msa0266620:CDS |
| GCTGGATTGGTAAAGGAGAC+TGG | 0.514721 | 2_2:-67350525 | Msa0266620:CDS |
| CTTGTTGATGCCATAATTTG+TGG | 0.517271 | 2_2:-67351551 | Msa0266620:CDS |
| ATTTCTACAAATGATTGTGC+AGG | 0.517797 | 2_2:-67351774 | Msa0266620:CDS |
| TCTTGTTGCTGGATTGGTAA+AGG | 0.518147 | 2_2:-67350532 | Msa0266620:CDS |
| TCTGAGTGCTACAAGTGAAA+AGG | 0.520491 | 2_2:-67352190 | Msa0266620:CDS |
| ATTTGATGCCATGCTTAACA+AGG | 0.520764 | 2_2:+67352362 | None:intergenic |
| CCCTCTATCCGAACATCATG+AGG | 0.521428 | 2_2:+67351734 | None:intergenic |
| TCCTTTGCAATTTAGTAGAG+AGG | 0.521866 | 2_2:-67350422 | Msa0266620:CDS |
| TCTATTGAACTTAACCATGA+AGG | 0.522377 | 2_2:-67348271 | Msa0266620:CDS |
| TACAGTTATGATTCATTCGA+CGG | 0.524471 | 2_2:-67353987 | Msa0266620:exon |
| AGTAGGCTGCAAGAAAAGCT+TGG | 0.524766 | 2_2:-67347966 | Msa0266620:three_prime_UTR |
| CAAATGATTGTGCAGGCGAT+GGG | 0.525532 | 2_2:-67351767 | Msa0266620:CDS |
| ATGGAGAAGACGGCGATGAA+GGG | 0.526641 | 2_2:+67353898 | None:intergenic |
| AGTTGGCTCAAATTACTCGT+TGG | 0.527311 | 2_2:-67351457 | Msa0266620:CDS |
| GTAATGATATTCATGTAGAA+AGG | 0.527922 | 2_2:-67350597 | Msa0266620:CDS |
| TGTAGCACAAAAGCTTATAG+AGG | 0.528432 | 2_2:-67351807 | Msa0266620:CDS |
| GCTCAAATTACTCGTTGGGC+TGG | 0.529100 | 2_2:-67351452 | Msa0266620:CDS |
| TCCCTTAATTGCCTATATGA+AGG | 0.529685 | 2_2:+67348349 | None:intergenic |
| ACAAATATCCATGGTAAAGG+AGG | 0.530448 | 2_2:-67351321 | Msa0266620:CDS |
| GCACAAAAGCTTATAGAGGA+TGG | 0.531800 | 2_2:-67351803 | Msa0266620:CDS |
| CACGGTTGCAATAGTGGACT+CGG | 0.534163 | 2_2:+67352312 | None:intergenic |
| AGACAGGGCCGTGTTCCAAA+AGG | 0.534873 | 2_2:-67351520 | Msa0266620:CDS |
| TGAGCACAATTCTGTTGAGG+TGG | 0.536544 | 2_2:-67352059 | Msa0266620:CDS |
| AAAAGACAAATAGATGGAAG+TGG | 0.544965 | 2_2:-67353777 | Msa0266620:CDS |
| GATGAAGTAAGATTAAAGCT+GGG | 0.545003 | 2_2:+67349881 | None:intergenic |
| ACTTCTGAAGGTAGAAGTGC+TGG | 0.546217 | 2_2:+67350154 | None:intergenic |
| CTGGATTGGTAAAGGAGACT+GGG | 0.546314 | 2_2:-67350524 | Msa0266620:CDS |
| TTGGAATATGTATATTTGGG+AGG | 0.551105 | 2_2:-67350022 | Msa0266620:CDS |
| CAAGAAAAGCAGCAATTGAT+CGG | 0.552563 | 2_2:+67353719 | None:intergenic |
| GAGAGAGAGACCTGGTGCCA+AGG | 0.552936 | 2_2:+67353867 | None:intergenic |
| GATTCATTCGACGGTGAAAG+CGG | 0.556753 | 2_2:-67353978 | Msa0266620:CDS |
| TTGCAGACAATCTCCAAAGT+GGG | 0.558280 | 2_2:-67349915 | Msa0266620:CDS |
| TTTCACTCCAGGACTGAAAG+AGG | 0.560173 | 2_2:+67350345 | None:intergenic |
| TGGTGCCAAGGTTTAAGGAA+TGG | 0.562873 | 2_2:+67353879 | None:intergenic |
| ATGGTTAAGTTCAATAGAAG+CGG | 0.567320 | 2_2:+67348276 | None:intergenic |
| TTTCAGTCCCTCCTTTACCA+TGG | 0.569781 | 2_2:+67351313 | None:intergenic |
| TCTGGATGTGATTATTTACA+GGG | 0.570759 | 2_2:-67349315 | Msa0266620:CDS |
| TCAAGGTGAACCAGTATCAA+GGG | 0.573541 | 2_2:-67350901 | Msa0266620:CDS |
| ATTAGTGGAAGCATGTAAGT+TGG | 0.575824 | 2_2:-67351474 | Msa0266620:CDS |
| ACCATAAAATAAGACAACAT+TGG | 0.575853 | 2_2:+67350495 | None:intergenic |
| ATTGGAGAAACAAATATCCA+TGG | 0.576382 | 2_2:-67351330 | Msa0266620:CDS |
| GAAACATACCATTTCACTCC+AGG | 0.577863 | 2_2:+67350334 | None:intergenic |
| GATATGAAGTTCACTCTCAT+GGG | 0.583514 | 2_2:+67351196 | None:intergenic |
| GATTATCAACTCTCTCTCGA+CGG | 0.583579 | 2_2:-67354021 | Msa0266620:five_prime_UTR |
| AAATGAGCCCTTGTTAAGCA+TGG | 0.585174 | 2_2:-67352370 | Msa0266620:CDS |
| ATGATACATCTTTGATACTG+TGG | 0.585455 | 2_2:+67350669 | None:intergenic |
| GCGACTCATTGTAGCAAATG+GGG | 0.586804 | 2_2:-67350218 | Msa0266620:CDS |
| TGTATTATCTGATATACTGA+AGG | 0.587784 | 2_2:-67350823 | Msa0266620:intron |
| ACCTCTCTACTAAATTGCAA+AGG | 0.591394 | 2_2:+67350421 | None:intergenic |
| CAAACAGGGAACCTAGATGA+AGG | 0.594928 | 2_2:+67352036 | None:intergenic |
| TACTTGATGTGAGGACAGCA+AGG | 0.595534 | 2_2:+67352260 | None:intergenic |
| AACCCACAAACAACCAGAAG+GGG | 0.597408 | 2_2:+67348588 | None:intergenic |
| ACTTACTGATTACGTGTGCA+TGG | 0.599009 | 2_2:-67351172 | Msa0266620:intron |
| ACTTTGTGAACATGCATATG+TGG | 0.600186 | 2_2:+67349348 | None:intergenic |
| GTTAAGCATGGCATCAAATG+TGG | 0.600853 | 2_2:-67352358 | Msa0266620:CDS |
| TTGCTCTGAGGAGTTATGTG+TGG | 0.604086 | 2_2:-67351277 | Msa0266620:CDS |
| TAATACAGATCTAGCATGTG+AGG | 0.610195 | 2_2:+67350839 | None:intergenic |
| TGCAACTTCTACTTGATGTG+AGG | 0.612048 | 2_2:+67352251 | None:intergenic |
| TGCTCTGAGGAGTTATGTGT+GGG | 0.613589 | 2_2:-67351276 | Msa0266620:CDS |
| GGGTGGCTTACAATTCATTG+TGG | 0.615987 | 2_2:-67351245 | Msa0266620:CDS |
| GGTTTAAGGAATGGAGAAGA+CGG | 0.616386 | 2_2:+67353888 | None:intergenic |
| CTCATGATGTTCGGATAGAG+GGG | 0.616659 | 2_2:-67351733 | Msa0266620:CDS |
| GATGTATCATAGAAAGCAGA+GGG | 0.617898 | 2_2:-67350656 | Msa0266620:CDS |
| TAACCCACAAACAACCAGAA+GGG | 0.618235 | 2_2:+67348587 | None:intergenic |
| AATAACACCATGAACACTCA+CGG | 0.621202 | 2_2:+67350192 | None:intergenic |
| CAAATATCCATGGTAAAGGA+GGG | 0.623502 | 2_2:-67351320 | Msa0266620:CDS |
| TGTGAGGAAATATAATTACA+TGG | 0.628481 | 2_2:+67350855 | None:intergenic |
| TTTGCAGACAATCTCCAAAG+TGG | 0.628783 | 2_2:-67349916 | Msa0266620:CDS |
| TCAGATCAGGAATGCAAGAG+AGG | 0.630141 | 2_2:-67349287 | Msa0266620:intron |
| CTTAACCATGGTATGACGTG+TGG | 0.631530 | 2_2:+67353672 | None:intergenic |
| TTCTGCAAAGTCCTGTCAGT+AGG | 0.633451 | 2_2:-67347983 | Msa0266620:three_prime_UTR |
| TTAACCCACAAACAACCAGA+AGG | 0.634727 | 2_2:+67348586 | None:intergenic |
| TTTCAATTAGAAGATTAAGG+AGG | 0.635301 | 2_2:+67351387 | None:intergenic |
| ATGTGTGGGACGTTCTTGGG+TGG | 0.646051 | 2_2:-67351262 | Msa0266620:CDS |
| CTACTAGATAGCACTTCTGA+AGG | 0.647267 | 2_2:+67350142 | None:intergenic |
| TTTGATGCCATGCTTAACAA+GGG | 0.651494 | 2_2:+67352363 | None:intergenic |
| AGATGTATCATAGAAAGCAG+AGG | 0.653768 | 2_2:-67350657 | Msa0266620:CDS |
| ATTGGTAAAGGAGACTGGGA+AGG | 0.660276 | 2_2:-67350520 | Msa0266620:CDS |
| CCTCTATCCGAACATCATGA+GGG | 0.663643 | 2_2:+67351735 | None:intergenic |
| AAATTCAAAGCAGTAGCACA+AGG | 0.669590 | 2_2:+67352225 | None:intergenic |
| TGCAGACAATCTCCAAAGTG+GGG | 0.673141 | 2_2:-67349914 | Msa0266620:CDS |
| TCAATTATCATGTTGCTCTG+AGG | 0.675945 | 2_2:-67351289 | Msa0266620:CDS |
| ACCCACAAACAACCAGAAGG+GGG | 0.681171 | 2_2:+67348589 | None:intergenic |
| GTTCAACATCATTACAAACA+GGG | 0.689432 | 2_2:+67352022 | None:intergenic |
| TCGCGCCACACGTCATACCA+TGG | 0.693442 | 2_2:-67353677 | Msa0266620:CDS |
| TAGACAAGATCCAACAAACA+CGG | 0.705372 | 2_2:+67352294 | None:intergenic |
| TTAAAAGTGATGGATTCGTG+TGG | 0.719236 | 2_2:-67351581 | Msa0266620:CDS |
| TATTCATGTAGAAAGGCCAG+AGG | 0.722961 | 2_2:-67350590 | Msa0266620:CDS |
| TCTCATGGGTATAACTACAG+GGG | 0.729707 | 2_2:+67351210 | None:intergenic |
| TTTGTGGGATGAGAGAGACA+GGG | 0.753747 | 2_2:-67351535 | Msa0266620:CDS |
| GTTCGAAATATAAAAGACCG+CGG | 0.753888 | 2_2:-67352123 | Msa0266620:CDS |
| ATTCAATCTTCTGTGCACCG+CGG | 0.760395 | 2_2:+67352106 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATAATAAAGGATATTT+TGG | + | chr2_2:67349348-67349367 | None:intergenic | 10.0% |
| !! | TGTGATAATTATTATAATAA+AGG | + | chr2_2:67349357-67349376 | None:intergenic | 10.0% |
| !!! | ATTATATTTCTAAAATTTCA+TGG | - | chr2_2:67351024-67351043 | Msa0266620:intron | 10.0% |
| !!! | TAGTTTCTTATATTTTTTCT+AGG | + | chr2_2:67348818-67348837 | None:intergenic | 15.0% |
| !! | AGAGATTTCTATTATAAATA+AGG | + | chr2_2:67349282-67349301 | None:intergenic | 15.0% |
| !!! | ATTATCACATTAATTTGTAT+TGG | - | chr2_2:67349368-67349387 | Msa0266620:CDS | 15.0% |
| !!! | TTATCACATTAATTTGTATT+GGG | - | chr2_2:67349369-67349388 | Msa0266620:CDS | 15.0% |
| !!! | TTGTTTTATATGATAAACAT+TGG | - | chr2_2:67350398-67350417 | Msa0266620:CDS | 15.0% |
| !!! | TATTTTCAATTAGAAGATTA+AGG | + | chr2_2:67350693-67350712 | None:intergenic | 15.0% |
| !! | AAGTCATACAAAAATAATAA+TGG | + | chr2_2:67350943-67350962 | None:intergenic | 15.0% |
| !!! | AATTTTAGAAATATAATCAG+TGG | + | chr2_2:67351021-67351040 | None:intergenic | 15.0% |
| !!! | AACTTGTTATTAACTTAATT+GGG | - | chr2_2:67351361-67351380 | Msa0266620:CDS | 15.0% |
| !!! | TCTTATATTCTAAGTTATTT+TGG | - | chr2_2:67351761-67351780 | Msa0266620:CDS | 15.0% |
| !! | AATAAATATGGAAATAAACA+TGG | + | chr2_2:67352326-67352345 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTTTGAAAGTTAT+AGG | - | chr2_2:67353957-67353976 | Msa0266620:CDS | 15.0% |
| !! | AAAAAGAAAAAGATAACGAT+CGG | - | chr2_2:67348131-67348150 | Msa0266620:three_prime_UTR | 20.0% |
| !!! | GGTAATTTTTCTTTTTTTTG+CGG | - | chr2_2:67348424-67348443 | Msa0266620:CDS | 20.0% |
| !! | TCATTCATTAAAATTGTATG+TGG | - | chr2_2:67348562-67348581 | Msa0266620:CDS | 20.0% |
| !!! | TTTTTTCTTATAATAGTGAC+CGG | - | chr2_2:67348637-67348656 | Msa0266620:CDS | 20.0% |
| !! | TACGAAAATTAGATAAAGAT+AGG | - | chr2_2:67348675-67348694 | Msa0266620:CDS | 20.0% |
| !! | GTATTTAGATATTAATGAGT+TGG | - | chr2_2:67348993-67349012 | Msa0266620:intron | 20.0% |
| !! | AATATTTCGTATCTATAACA+TGG | - | chr2_2:67349231-67349250 | Msa0266620:intron | 20.0% |
| !! | TTGAAAATAGAAAATCAGTA+AGG | - | chr2_2:67349407-67349426 | Msa0266620:CDS | 20.0% |
| !! | TGAAAATAGAAAATCAGTAA+GGG | - | chr2_2:67349408-67349427 | Msa0266620:CDS | 20.0% |
| !! | ATATCAAATAAAGCTGAATT+TGG | - | chr2_2:67349447-67349466 | Msa0266620:intron | 20.0% |
| !!! | ATGACTTTTGCTTATAAATA+AGG | - | chr2_2:67349505-67349524 | Msa0266620:intron | 20.0% |
| !!! | ATTTGTTTTAAGAGAGATAA+GGG | - | chr2_2:67349550-67349569 | Msa0266620:intron | 20.0% |
| !!! | AATGTTTTTTGTTTTGTTGA+GGG | + | chr2_2:67350186-67350205 | None:intergenic | 20.0% |
| !!! | AAATGTTTTTTGTTTTGTTG+AGG | + | chr2_2:67350187-67350206 | None:intergenic | 20.0% |
| !!! | CACTTTTAAACAATTTTCTT+GGG | + | chr2_2:67350482-67350501 | None:intergenic | 20.0% |
| !!! | TCACTTTTAAACAATTTTCT+TGG | + | chr2_2:67350483-67350502 | None:intergenic | 20.0% |
| !! | AGAAAATTGTTTAAAAGTGA+TGG | - | chr2_2:67350483-67350502 | Msa0266620:CDS | 20.0% |
| !!! | ATATGAACAATAACTTTTCA+GGG | + | chr2_2:67351331-67351350 | None:intergenic | 20.0% |
| !! | CAATTAAGTTAATAACAAGT+TGG | + | chr2_2:67351362-67351381 | None:intergenic | 20.0% |
| !!! | CAACTTGTTATTAACTTAAT+TGG | - | chr2_2:67351360-67351379 | Msa0266620:CDS | 20.0% |
| !!! | CTAAGTTATTTTGGATTTTA+TGG | - | chr2_2:67351770-67351789 | Msa0266620:CDS | 20.0% |
| !! | ATTGTTGGAATATGTATATT+TGG | - | chr2_2:67352048-67352067 | Msa0266620:CDS | 20.0% |
| !! | TTGTTGGAATATGTATATTT+GGG | - | chr2_2:67352049-67352068 | Msa0266620:CDS | 20.0% |
| !! | TATATGGAAGGAAATAAATA+TGG | + | chr2_2:67352338-67352357 | None:intergenic | 20.0% |
| !! | TCTGTAAAATATCAATTTCA+AGG | + | chr2_2:67352373-67352392 | None:intergenic | 20.0% |
| !!! | CAACTCTTATTTGAAAAATA+CGG | + | chr2_2:67352402-67352421 | None:intergenic | 20.0% |
| !! | AACATTTGTTTAAGTAGTTT+AGG | - | chr2_2:67352597-67352616 | Msa0266620:intron | 20.0% |
| !!! | AGAATTTAATTTGAACATCT+AGG | + | chr2_2:67352892-67352911 | None:intergenic | 20.0% |
| !! | CAAACAATACTTTATCAAAT+AGG | + | chr2_2:67353066-67353085 | None:intergenic | 20.0% |
| !!! | CTATTTGATAAAGTATTGTT+TGG | - | chr2_2:67353064-67353083 | Msa0266620:intron | 20.0% |
| !! | TTCAAACTTAATCTAAGAAT+TGG | - | chr2_2:67353120-67353139 | Msa0266620:intron | 20.0% |
| !! | ACATTAACATTTCATAAAGA+TGG | + | chr2_2:67353169-67353188 | None:intergenic | 20.0% |
| !!! | TCTGTTAACTTTAAATTTTG+TGG | - | chr2_2:67353325-67353344 | Msa0266620:intron | 20.0% |
| !! | GGCAATTAAAATAATCAAAA+TGG | - | chr2_2:67353649-67353668 | Msa0266620:intron | 20.0% |
| !!! | AAAAATTGGTTGATGATTGA+TGG | - | chr2_2:67347994-67348013 | Msa0266620:three_prime_UTR | 25.0% |
| ! | TTGATGAAAAGACAAATAGA+TGG | - | chr2_2:67348291-67348310 | Msa0266620:CDS | 25.0% |
| ! | AAGAAAAATTACCTTAACCA+TGG | + | chr2_2:67348417-67348436 | None:intergenic | 25.0% |
| ! | ATTAGTGATATATTAGTGAC+CGG | + | chr2_2:67348517-67348536 | None:intergenic | 25.0% |
| !! | TAATGAGTTGGATACAAATA+TGG | - | chr2_2:67349005-67349024 | Msa0266620:intron | 25.0% |
| ! | AATTATTTGGCACACAAAAA+AGG | + | chr2_2:67349172-67349191 | None:intergenic | 25.0% |
| !!! | TTTTTTGTGTGCCAAATAAT+TGG | - | chr2_2:67349171-67349190 | Msa0266620:intron | 25.0% |
| !! | AAAGATTGGTTATTGCTAAA+CGG | - | chr2_2:67349203-67349222 | Msa0266620:intron | 25.0% |
| ! | TCTATTATAAATAAGGTCGA+AGG | + | chr2_2:67349275-67349294 | None:intergenic | 25.0% |
| ! | GAAAATAGAAAATCAGTAAG+GGG | - | chr2_2:67349409-67349428 | Msa0266620:CDS | 25.0% |
| !!! | CATTTGTTTTAAGAGAGATA+AGG | - | chr2_2:67349549-67349568 | Msa0266620:intron | 25.0% |
| !!! | TTTGTTTTAAGAGAGATAAG+GGG | - | chr2_2:67349551-67349570 | Msa0266620:intron | 25.0% |
| ! | TATATTTCGAACAATGCAAA+TGG | + | chr2_2:67349943-67349962 | None:intergenic | 25.0% |
| !! | ACAGAAGATTGAATATTTTG+TGG | - | chr2_2:67349977-67349996 | Msa0266620:CDS | 25.0% |
| !!! | ATGTTTTTTGTTTTGTTGAG+GGG | + | chr2_2:67350185-67350204 | None:intergenic | 25.0% |
| ! | GACAAAAGTAAATGTTTGTT+AGG | + | chr2_2:67350448-67350467 | None:intergenic | 25.0% |
| ! | TTTCAATTAGAAGATTAAGG+AGG | + | chr2_2:67350690-67350709 | None:intergenic | 25.0% |
| ! | TTAGAAATATAATCAGTGGT+AGG | + | chr2_2:67351017-67351036 | None:intergenic | 25.0% |
| ! | TGTGAGGAAATATAATTACA+TGG | + | chr2_2:67351222-67351241 | None:intergenic | 25.0% |
| ! | TGTATTATCTGATATACTGA+AGG | - | chr2_2:67351251-67351270 | Msa0266620:CDS | 25.0% |
| ! | CAGGGATAATATATAATCTA+GGG | + | chr2_2:67351313-67351332 | None:intergenic | 25.0% |
| ! | TCAGGGATAATATATAATCT+AGG | + | chr2_2:67351314-67351333 | None:intergenic | 25.0% |
| !! | CATATGAACAATAACTTTTC+AGG | + | chr2_2:67351332-67351351 | None:intergenic | 25.0% |
| ! | GTAATGATATTCATGTAGAA+AGG | - | chr2_2:67351477-67351496 | Msa0266620:CDS | 25.0% |
| !!! | TCCAATGTTGTCTTATTTTA+TGG | - | chr2_2:67351578-67351597 | Msa0266620:CDS | 25.0% |
| ! | ACCATAAAATAAGACAACAT+TGG | + | chr2_2:67351582-67351601 | None:intergenic | 25.0% |
| !!! | TTGTCTTATTTTATGGTATG+TGG | - | chr2_2:67351585-67351604 | Msa0266620:CDS | 25.0% |
| !!! | TGTCTTATTTTATGGTATGT+GGG | - | chr2_2:67351586-67351605 | Msa0266620:CDS | 25.0% |
| !!! | TCCTTTTGGAAAATTCATTT+GGG | + | chr2_2:67351799-67351818 | None:intergenic | 25.0% |
| !!! | ATCCTTTTGGAAAATTCATT+TGG | + | chr2_2:67351800-67351819 | None:intergenic | 25.0% |
| !! | AATGAATTTTCCAAAAGGAT+TGG | - | chr2_2:67351800-67351819 | Msa0266620:CDS | 25.0% |
| !! | ATGAATTTTCCAAAAGGATT+GGG | - | chr2_2:67351801-67351820 | Msa0266620:CDS | 25.0% |
| !!! | GAAATAACAGATTGTTTTGT+TGG | - | chr2_2:67351968-67351987 | Msa0266620:CDS | 25.0% |
| ! | TATAGATATCTAGAAGAATC+TGG | + | chr2_2:67352264-67352283 | None:intergenic | 25.0% |
| ! | AGATTCTTCTAGATATCTAT+AGG | - | chr2_2:67352263-67352282 | Msa0266620:CDS | 25.0% |
| ! | CTATAAACTGGATAATAGAA+TGG | + | chr2_2:67352481-67352500 | None:intergenic | 25.0% |
| ! | AAAATGACAAGTCAATAAAC+TGG | + | chr2_2:67352525-67352544 | None:intergenic | 25.0% |
| !!! | AGTTTATTGACTTGTCATTT+TGG | - | chr2_2:67352524-67352543 | Msa0266620:intron | 25.0% |
| !!! | GTTTATTGACTTGTCATTTT+GGG | - | chr2_2:67352525-67352544 | Msa0266620:intron | 25.0% |
| ! | TAATGGAAGCTAAATTGAAT+TGG | - | chr2_2:67352664-67352683 | Msa0266620:intron | 25.0% |
| ! | CTCATGAAAATTTAAGAACA+TGG | - | chr2_2:67352934-67352953 | Msa0266620:intron | 25.0% |
| ! | TTTATATCTTATCTTGACCA+GGG | - | chr2_2:67352981-67353000 | Msa0266620:intron | 25.0% |
| ! | CATCAAAAATCAAAAGCAAA+GGG | + | chr2_2:67353208-67353227 | None:intergenic | 25.0% |
| ! | TCATCAAAAATCAAAAGCAA+AGG | + | chr2_2:67353209-67353228 | None:intergenic | 25.0% |
| !! | ATTTTCAACCAAATTCGTTT+GGG | - | chr2_2:67353238-67353257 | Msa0266620:intron | 25.0% |
| ! | ATCCTTAAAAATTAGAAGCA+AGG | - | chr2_2:67353263-67353282 | Msa0266620:intron | 25.0% |
| !! | ATCCTTGCTTCTAATTTTTA+AGG | + | chr2_2:67353268-67353287 | None:intergenic | 25.0% |
| ! | GGACAATTTCTCATAAAAAA+TGG | + | chr2_2:67353294-67353313 | None:intergenic | 25.0% |
| ! | GACTGCAATAATAAATAACA+AGG | + | chr2_2:67353382-67353401 | None:intergenic | 25.0% |
| !!! | TTATAAAGGTTGATATTAGC+TGG | - | chr2_2:67353411-67353430 | Msa0266620:intron | 25.0% |
| !!! | TATAAAGGTTGATATTAGCT+GGG | - | chr2_2:67353412-67353431 | Msa0266620:intron | 25.0% |
| !! | CATTGATTAAACTAGTACAT+TGG | - | chr2_2:67353438-67353457 | Msa0266620:intron | 25.0% |
| !! | ATACTCTTCAAGATGTTTTA+CGG | - | chr2_2:67353849-67353868 | Msa0266620:intron | 25.0% |
| ! | TTCGAAAAACTTCATATTCT+AGG | + | chr2_2:67353987-67354006 | None:intergenic | 25.0% |
| ! | GCTATGTTACAGTTTATATT+AGG | - | chr2_2:67354031-67354050 | Msa0266620:five_prime_UTR | 25.0% |
| TACAGTTATGATTCATTCGA+CGG | - | chr2_2:67348087-67348106 | Msa0266620:three_prime_UTR | 30.0% | |
| AAAAGACAAATAGATGGAAG+TGG | - | chr2_2:67348297-67348316 | Msa0266620:CDS | 30.0% | |
| !! | CAGTTATTTTATTCTCGTGT+TGG | + | chr2_2:67348457-67348476 | None:intergenic | 30.0% |
| ! | ATGTTGTGGATTTTATCGTA+AGG | - | chr2_2:67348744-67348763 | Msa0266620:intron | 30.0% |
| ATAGTTCAAAGTTCAAACGA+TGG | + | chr2_2:67349050-67349069 | None:intergenic | 30.0% | |
| CAATAACCAATCTTTGTTAG+GGG | + | chr2_2:67349198-67349217 | None:intergenic | 30.0% | |
| GCAATAACCAATCTTTGTTA+GGG | + | chr2_2:67349199-67349218 | None:intergenic | 30.0% | |
| AGCAATAACCAATCTTTGTT+AGG | + | chr2_2:67349200-67349219 | None:intergenic | 30.0% | |
| CAAAAGTCATCCTAATTTCA+TGG | + | chr2_2:67349495-67349514 | None:intergenic | 30.0% | |
| TTGCTTATAAATAAGGCTAG+AGG | - | chr2_2:67349512-67349531 | Msa0266620:intron | 30.0% | |
| TGCTTATAAATAAGGCTAGA+GGG | - | chr2_2:67349513-67349532 | Msa0266620:intron | 30.0% | |
| !!! | TTGTTTTAAGAGAGATAAGG+GGG | - | chr2_2:67349552-67349571 | Msa0266620:intron | 30.0% |
| GGGCTTATTATAGTTGAATT+TGG | - | chr2_2:67349573-67349592 | Msa0266620:intron | 30.0% | |
| AATATGTGCTTTACTTCATC+AGG | - | chr2_2:67349632-67349651 | Msa0266620:intron | 30.0% | |
| !!! | ATATTTTGGGAGCATTGTTA+TGG | - | chr2_2:67349667-67349686 | Msa0266620:intron | 30.0% |
| ! | GATTGAATATTTTGTGGAGA+TGG | - | chr2_2:67349983-67350002 | Msa0266620:CDS | 30.0% |
| GTTCAACATCATTACAAACA+GGG | + | chr2_2:67350055-67350074 | None:intergenic | 30.0% | |
| AGTTCAACATCATTACAAAC+AGG | + | chr2_2:67350056-67350075 | None:intergenic | 30.0% | |
| TAGTCTAAGTAATTGACACA+AGG | + | chr2_2:67350210-67350229 | None:intergenic | 30.0% | |
| ATTTCTACAAATGATTGTGC+AGG | - | chr2_2:67350300-67350319 | Msa0266620:CDS | 30.0% | |
| ! | TTGTTGATGCCATAATTTGT+GGG | - | chr2_2:67350524-67350543 | Msa0266620:CDS | 30.0% |
| ! | ATAGTTGTTCTCAATCCTTT+TGG | + | chr2_2:67350572-67350591 | None:intergenic | 30.0% |
| AAAAGGATTGAGAACAACTA+TGG | - | chr2_2:67350571-67350590 | Msa0266620:CDS | 30.0% | |
| ! | ATGGATATTTGTTTCTCCAA+TGG | + | chr2_2:67350745-67350764 | None:intergenic | 30.0% |
| ATTGGAGAAACAAATATCCA+TGG | - | chr2_2:67350744-67350763 | Msa0266620:intron | 30.0% | |
| GAAACAAATATCCATGGTAA+AGG | - | chr2_2:67350750-67350769 | Msa0266620:intron | 30.0% | |
| AGAAATTTGCACAACATCAA+TGG | + | chr2_2:67351074-67351093 | None:intergenic | 30.0% | |
| TTGTGGATGCAATTCAAAAA+TGG | - | chr2_2:67351115-67351134 | Msa0266620:intron | 30.0% | |
| !! | CAGCATCATTTTGATATATC+CGG | + | chr2_2:67351143-67351162 | None:intergenic | 30.0% |
| ! | GATGCTGATGATAATTTTCA+AGG | - | chr2_2:67351156-67351175 | Msa0266620:intron | 30.0% |
| ATGATACATCTTTGATACTG+TGG | + | chr2_2:67351408-67351427 | None:intergenic | 30.0% | |
| TGCAAACTGTATTCCATAAA+AGG | - | chr2_2:67351519-67351538 | Msa0266620:CDS | 30.0% | |
| !!! | GTCTTATTTTATGGTATGTG+GGG | - | chr2_2:67351587-67351606 | Msa0266620:CDS | 30.0% |
| ! | TCCCAAATGAATTTTCCAAA+AGG | - | chr2_2:67351795-67351814 | Msa0266620:CDS | 30.0% |
| !! | TGAAGCATTGATGTTATTGT+TGG | - | chr2_2:67352033-67352052 | Msa0266620:CDS | 30.0% |
| TTGGAATATGTATATTTGGG+AGG | - | chr2_2:67352052-67352071 | Msa0266620:CDS | 30.0% | |
| GATGAAGTAAGATTAAAGCT+GGG | + | chr2_2:67352196-67352215 | None:intergenic | 30.0% | |
| AGATGAAGTAAGATTAAAGC+TGG | + | chr2_2:67352197-67352216 | None:intergenic | 30.0% | |
| !!! | ACAGCTGTTTTTCTATAAAC+TGG | + | chr2_2:67352493-67352512 | None:intergenic | 30.0% |
| !! | GTCATTTTGGGTAAAGTTAA+CGG | - | chr2_2:67352537-67352556 | Msa0266620:intron | 30.0% |
| ! | TGTTTTCAGAGATGTCATAA+TGG | - | chr2_2:67352647-67352666 | Msa0266620:intron | 30.0% |
| TCTGGATGTGATTATTTACA+GGG | - | chr2_2:67352759-67352778 | Msa0266620:intron | 30.0% | |
| TCTTTGCCTATTATTTAAGC+TGG | - | chr2_2:67352909-67352928 | Msa0266620:intron | 30.0% | |
| TGAGTTCCAGCTTAAATAAT+AGG | + | chr2_2:67352918-67352937 | None:intergenic | 30.0% | |
| GTTTATATCTTATCTTGACC+AGG | - | chr2_2:67352980-67352999 | Msa0266620:intron | 30.0% | |
| AGTATTGTTTGGAAACTCAT+TGG | - | chr2_2:67353075-67353094 | Msa0266620:intron | 30.0% | |
| ! | ACATTTCATAAAGATGGACT+TGG | + | chr2_2:67353163-67353182 | None:intergenic | 30.0% |
| ! | TTGATTTTTGATGAGAAGCA+AGG | - | chr2_2:67353215-67353234 | Msa0266620:intron | 30.0% |
| ! | GATTTTCAACCAAATTCGTT+TGG | - | chr2_2:67353237-67353256 | Msa0266620:intron | 30.0% |
| CAGTCATTCACAAGTTATAA+AGG | - | chr2_2:67353397-67353416 | Msa0266620:intron | 30.0% | |
| TCCTTCATATAGGCAATTAA+GGG | - | chr2_2:67353724-67353743 | Msa0266620:CDS | 30.0% | |
| CAATAGAAGCGGAATAAATA+AGG | + | chr2_2:67353790-67353809 | None:intergenic | 30.0% | |
| ATGGTTAAGTTCAATAGAAG+CGG | + | chr2_2:67353801-67353820 | None:intergenic | 30.0% | |
| TCTATTGAACTTAACCATGA+AGG | - | chr2_2:67353803-67353822 | Msa0266620:intron | 30.0% | |
| ! | GGTGTGTTGTAAAATTTTGT+AGG | - | chr2_2:67353885-67353904 | Msa0266620:CDS | 30.0% |
| !!! | AATCCTTATTTTGAGCTGTT+AGG | - | chr2_2:67354009-67354028 | Msa0266620:five_prime_UTR | 30.0% |
| CAAGAAAAGCAGCAATTGAT+CGG | + | chr2_2:67348358-67348377 | None:intergenic | 35.0% | |
| TTTCTTATAATAGTGACCGG+AGG | - | chr2_2:67348640-67348659 | Msa0266620:CDS | 35.0% | |
| TTCTTATAATAGTGACCGGA+GGG | - | chr2_2:67348641-67348660 | Msa0266620:CDS | 35.0% | |
| TTAGAGAAACACATCTCATG+TGG | - | chr2_2:67348714-67348733 | Msa0266620:intron | 35.0% | |
| ! | TTGTGGATTTTATCGTAAGG+AGG | - | chr2_2:67348747-67348766 | Msa0266620:intron | 35.0% |
| ! | TGTGGATTTTATCGTAAGGA+GGG | - | chr2_2:67348748-67348767 | Msa0266620:intron | 35.0% |
| TTTCTCTTACAAACCCACTT+GGG | + | chr2_2:67348963-67348982 | None:intergenic | 35.0% | |
| ATGCTTTATCCCACTAAACA+GGG | + | chr2_2:67349081-67349100 | None:intergenic | 35.0% | |
| ! | CATGGTTGTTGTTATTGCTT+AGG | - | chr2_2:67349098-67349117 | Msa0266620:intron | 35.0% |
| TTGTTAGGGGTCCAATTATT+TGG | + | chr2_2:67349185-67349204 | None:intergenic | 35.0% | |
| ! | GTGACTTTTGCTTATGTTTG+AGG | - | chr2_2:67349469-67349488 | Msa0266620:intron | 35.0% |
| ! | ATGTTTGAGGCCATGAAATT+AGG | - | chr2_2:67349482-67349501 | Msa0266620:intron | 35.0% |
| !!! | TGTTTTAAGAGAGATAAGGG+GGG | - | chr2_2:67349553-67349572 | Msa0266620:intron | 35.0% |
| ! | ATAGTTGAATTTGGCCTTCT+TGG | - | chr2_2:67349582-67349601 | Msa0266620:intron | 35.0% |
| ATAGATTACATCAGCCAAGA+AGG | + | chr2_2:67349599-67349618 | None:intergenic | 35.0% | |
| ! | GAATCTGCTGCTGATATTTT+GGG | - | chr2_2:67349654-67349673 | Msa0266620:intron | 35.0% |
| TTTGATGCCATGCTTAACAA+GGG | + | chr2_2:67349714-67349733 | None:intergenic | 35.0% | |
| ATTTGATGCCATGCTTAACA+AGG | + | chr2_2:67349715-67349734 | None:intergenic | 35.0% | |
| TAGACAAGATCCAACAAACA+CGG | + | chr2_2:67349783-67349802 | None:intergenic | 35.0% | |
| AAATTCAAAGCAGTAGCACA+AGG | + | chr2_2:67349852-67349871 | None:intergenic | 35.0% | |
| ! | TTGTGCTACTGCTTTGAATT+TGG | - | chr2_2:67349851-67349870 | Msa0266620:CDS | 35.0% |
| GTTCGAAATATAAAAGACCG+CGG | - | chr2_2:67349951-67349970 | Msa0266620:CDS | 35.0% | |
| ! | TTTTGAGCACAATTCTGTTG+AGG | - | chr2_2:67350012-67350031 | Msa0266620:CDS | 35.0% |
| CTAAAGCTGTACACATCTTT+AGG | - | chr2_2:67350134-67350153 | Msa0266620:CDS | 35.0% | |
| !!! | TTTTTGTTTTGTTGAGGGGA+AGG | + | chr2_2:67350181-67350200 | None:intergenic | 35.0% |
| TGTAGCACAAAAGCTTATAG+AGG | - | chr2_2:67350267-67350286 | Msa0266620:CDS | 35.0% | |
| AATCTAACCCTCATGATGTT+CGG | - | chr2_2:67350332-67350351 | Msa0266620:CDS | 35.0% | |
| !! | TTAAAAGTGATGGATTCGTG+TGG | - | chr2_2:67350493-67350512 | Msa0266620:CDS | 35.0% |
| CTTGTTGATGCCATAATTTG+TGG | - | chr2_2:67350523-67350542 | Msa0266620:CDS | 35.0% | |
| !!! | TTCTCAATCCTTTTGGAACA+CGG | + | chr2_2:67350565-67350584 | None:intergenic | 35.0% |
| ! | CAACTATGGTTCTGTATTAG+TGG | - | chr2_2:67350585-67350604 | Msa0266620:CDS | 35.0% |
| ! | ATTAGTGGAAGCATGTAAGT+TGG | - | chr2_2:67350600-67350619 | Msa0266620:CDS | 35.0% |
| ! | GCAATCATCATATCAGGTTT+TGG | - | chr2_2:67350644-67350663 | Msa0266620:CDS | 35.0% |
| !!! | CATATCAGGTTTTGGAAACA+AGG | - | chr2_2:67350652-67350671 | Msa0266620:CDS | 35.0% |
| GCAAAACAATTTCGGAAGAT+TGG | + | chr2_2:67350723-67350742 | None:intergenic | 35.0% | |
| !! | TTCCGAAATTGTTTTGCCAT+TGG | - | chr2_2:67350726-67350745 | Msa0266620:intron | 35.0% |
| CTCCAATGGCAAAACAATTT+CGG | + | chr2_2:67350731-67350750 | None:intergenic | 35.0% | |
| ACAAATATCCATGGTAAAGG+AGG | - | chr2_2:67350753-67350772 | Msa0266620:intron | 35.0% | |
| CAAATATCCATGGTAAAGGA+GGG | - | chr2_2:67350754-67350773 | Msa0266620:intron | 35.0% | |
| TCAATTATCATGTTGCTCTG+AGG | - | chr2_2:67350785-67350804 | Msa0266620:intron | 35.0% | |
| GATATGAAGTTCACTCTCAT+GGG | + | chr2_2:67350881-67350900 | None:intergenic | 35.0% | |
| TGATATGAAGTTCACTCTCA+TGG | + | chr2_2:67350882-67350901 | None:intergenic | 35.0% | |
| CTTCAAGTGTGTGTATACAT+TGG | - | chr2_2:67350960-67350979 | Msa0266620:CDS | 35.0% | |
| AAATGTGAAGCTGCAGAAAA+AGG | + | chr2_2:67351097-67351116 | None:intergenic | 35.0% | |
| ATGCAATTCAAAAATGGTGC+CGG | - | chr2_2:67351121-67351140 | Msa0266620:intron | 35.0% | |
| ATTAAAACAGCCCTTGATAC+TGG | + | chr2_2:67351186-67351205 | None:intergenic | 35.0% | |
| TAATACAGATCTAGCATGTG+AGG | + | chr2_2:67351238-67351257 | None:intergenic | 35.0% | |
| TCTGATATACTGAAGGTCAT+AGG | - | chr2_2:67351258-67351277 | Msa0266620:CDS | 35.0% | |
| AGATGTATCATAGAAAGCAG+AGG | - | chr2_2:67351417-67351436 | Msa0266620:CDS | 35.0% | |
| GATGTATCATAGAAAGCAGA+GGG | - | chr2_2:67351418-67351437 | Msa0266620:CDS | 35.0% | |
| TGGAATACAGTTTGCAAATG+AGG | + | chr2_2:67351515-67351534 | None:intergenic | 35.0% | |
| GCAAAGGAATGTCTAGTAAA+AGG | + | chr2_2:67351640-67351659 | None:intergenic | 35.0% | |
| TCCTTTGCAATTTAGTAGAG+AGG | - | chr2_2:67351652-67351671 | Msa0266620:intron | 35.0% | |
| ACCTCTCTACTAAATTGCAA+AGG | + | chr2_2:67351656-67351675 | None:intergenic | 35.0% | |
| GATTGGGAACTCTCTTAATA+AGG | - | chr2_2:67351817-67351836 | Msa0266620:CDS | 35.0% | |
| AATAACACCATGAACACTCA+CGG | + | chr2_2:67351885-67351904 | None:intergenic | 35.0% | |
| GTAAGATTAAAGCTGGGAAA+AGG | + | chr2_2:67352190-67352209 | None:intergenic | 35.0% | |
| !!! | GCTGGAAGTTATTTTTCGTA+TGG | - | chr2_2:67352226-67352245 | Msa0266620:CDS | 35.0% |
| AAGCTACTCAAGTATATGGA+AGG | + | chr2_2:67352350-67352369 | None:intergenic | 35.0% | |
| AAGGAAGCTACTCAAGTATA+TGG | + | chr2_2:67352354-67352373 | None:intergenic | 35.0% | |
| ATAAGAGTTGCGTTTCTGAA+AGG | - | chr2_2:67352412-67352431 | Msa0266620:CDS | 35.0% | |
| TCTGAAAGGACTGTTAAACT+TGG | - | chr2_2:67352426-67352445 | Msa0266620:intron | 35.0% | |
| !! | GCTAAATTGAATTGGCTTGT+TGG | - | chr2_2:67352672-67352691 | Msa0266620:intron | 35.0% |
| !! | AATTGAATTGGCTTGTTGGA+TGG | - | chr2_2:67352676-67352695 | Msa0266620:intron | 35.0% |
| !! | ATTGAATTGGCTTGTTGGAT+GGG | - | chr2_2:67352677-67352696 | Msa0266620:intron | 35.0% |
| ACTTTGTGAACATGCATATG+TGG | + | chr2_2:67352729-67352748 | None:intergenic | 35.0% | |
| CACAAAGTTATATTGCAGTC+TGG | - | chr2_2:67352741-67352760 | Msa0266620:intron | 35.0% | |
| GTCTGGATGTGATTATTTAC+AGG | - | chr2_2:67352758-67352777 | Msa0266620:intron | 35.0% | |
| ATCTTCATCACTCGTTTATC+AGG | + | chr2_2:67352865-67352884 | None:intergenic | 35.0% | |
| AAGGATATCCCAAACGAATT+TGG | + | chr2_2:67353249-67353268 | None:intergenic | 35.0% | |
| ATTCAATTTGCAGCCATATG+TGG | - | chr2_2:67353532-67353551 | Msa0266620:intron | 35.0% | |
| !!! | CTGGATTTTGGAAAGTATTC+AGG | - | chr2_2:67353577-67353596 | Msa0266620:intron | 35.0% |
| TCTTGATTCTTCTAAGCAGT+TGG | - | chr2_2:67353628-67353647 | Msa0266620:intron | 35.0% | |
| CTCCTTCATATAGGCAATTA+AGG | - | chr2_2:67353723-67353742 | Msa0266620:CDS | 35.0% | |
| TCCCTTAATTGCCTATATGA+AGG | + | chr2_2:67353728-67353747 | None:intergenic | 35.0% | |
| !! | TAAAGCGTTTTTCACCTTCA+TGG | + | chr2_2:67353820-67353839 | None:intergenic | 35.0% |
| ATGAAGGTGAAAAACGCTTT+AGG | - | chr2_2:67353819-67353838 | Msa0266620:intron | 35.0% | |
| TAGCCTAACAGCTCAAAATA+AGG | + | chr2_2:67354015-67354034 | None:intergenic | 35.0% | |
| GGTAACTGTTACAGTTAGTT+AGG | - | chr2_2:67354052-67354071 | Msa0266620:five_prime_UTR | 35.0% | |
| GATTATCAACTCTCTCTCGA+CGG | - | chr2_2:67348053-67348072 | Msa0266620:three_prime_UTR | 40.0% | |
| GGTTTAAGGAATGGAGAAGA+CGG | + | chr2_2:67348189-67348208 | None:intergenic | 40.0% | |
| CTTCTCCATTCCTTAAACCT+TGG | - | chr2_2:67348190-67348209 | Msa0266620:three_prime_UTR | 40.0% | |
| GTGATATATTAGTGACCGGA+GGG | + | chr2_2:67348513-67348532 | None:intergenic | 40.0% | |
| AGTGATATATTAGTGACCGG+AGG | + | chr2_2:67348514-67348533 | None:intergenic | 40.0% | |
| TAGCTCAGTGAAATTAGCAC+TGG | - | chr2_2:67348870-67348889 | Msa0266620:intron | 40.0% | |
| AGCTCAGTGAAATTAGCACT+GGG | - | chr2_2:67348871-67348890 | Msa0266620:intron | 40.0% | |
| GTTTCTCTTACAAACCCACT+TGG | + | chr2_2:67348964-67348983 | None:intergenic | 40.0% | |
| CATGCTTTATCCCACTAAAC+AGG | + | chr2_2:67349082-67349101 | None:intergenic | 40.0% | |
| CTGTTTAGTGGGATAAAGCA+TGG | - | chr2_2:67349080-67349099 | Msa0266620:intron | 40.0% | |
| !! | TTGCTCCCTAGTTTTTGCTA+TGG | - | chr2_2:67349123-67349142 | Msa0266620:intron | 40.0% |
| GCTCTCCATAGCAAAAACTA+GGG | + | chr2_2:67349131-67349150 | None:intergenic | 40.0% | |
| ATTGGACCCCTAACAAAGAT+TGG | - | chr2_2:67349189-67349208 | Msa0266620:intron | 40.0% | |
| ! | GATTGGTTATTGCTAAACGG+CGG | - | chr2_2:67349206-67349225 | Msa0266620:intron | 40.0% |
| ! | GGAATCTGCTGCTGATATTT+TGG | - | chr2_2:67349653-67349672 | Msa0266620:intron | 40.0% |
| AAATGAGCCCTTGTTAAGCA+TGG | - | chr2_2:67349704-67349723 | Msa0266620:intron | 40.0% | |
| GTTAAGCATGGCATCAAATG+TGG | - | chr2_2:67349716-67349735 | Msa0266620:intron | 40.0% | |
| AACAAACACGGTTGCAATAG+TGG | + | chr2_2:67349771-67349790 | None:intergenic | 40.0% | |
| ACTATTGCAACCGTGTTTGT+TGG | - | chr2_2:67349770-67349789 | Msa0266620:intron | 40.0% | |
| TGCAACTTCTACTTGATGTG+AGG | + | chr2_2:67349826-67349845 | None:intergenic | 40.0% | |
| TCTGAGTGCTACAAGTGAAA+AGG | - | chr2_2:67349884-67349903 | Msa0266620:CDS | 40.0% | |
| GCACAAAAGCTTATAGAGGA+TGG | - | chr2_2:67350271-67350290 | Msa0266620:CDS | 40.0% | |
| CTCTCTCATCCCACAAATTA+TGG | + | chr2_2:67350536-67350555 | None:intergenic | 40.0% | |
| ! | AGTTGGCTCAAATTACTCGT+TGG | - | chr2_2:67350617-67350636 | Msa0266620:CDS | 40.0% |
| ! | GTTGGCTCAAATTACTCGTT+GGG | - | chr2_2:67350618-67350637 | Msa0266620:CDS | 40.0% |
| TCTCATGGGTATAACTACAG+GGG | + | chr2_2:67350867-67350886 | None:intergenic | 40.0% | |
| CTCTCATGGGTATAACTACA+GGG | + | chr2_2:67350868-67350887 | None:intergenic | 40.0% | |
| ACTCTCATGGGTATAACTAC+AGG | + | chr2_2:67350869-67350888 | None:intergenic | 40.0% | |
| ! | ACTTACTGATTACGTGTGCA+TGG | - | chr2_2:67350902-67350921 | Msa0266620:CDS | 40.0% |
| TCAGTGGTAGGAAGAAACTA+TGG | + | chr2_2:67351005-67351024 | None:intergenic | 40.0% | |
| GCACAACATCAATGGAATGA+AGG | + | chr2_2:67351066-67351085 | None:intergenic | 40.0% | |
| TTTCTGCAGCTTCACATTTG+TGG | - | chr2_2:67351098-67351117 | Msa0266620:intron | 40.0% | |
| TTCAAGGTGAACCAGTATCA+AGG | - | chr2_2:67351172-67351191 | Msa0266620:intron | 40.0% | |
| TCAAGGTGAACCAGTATCAA+GGG | - | chr2_2:67351173-67351192 | Msa0266620:CDS | 40.0% | |
| TATTCATGTAGAAAGGCCAG+AGG | - | chr2_2:67351484-67351503 | Msa0266620:CDS | 40.0% | |
| !! | TCCATAAAAGGTCTTGTTGC+TGG | - | chr2_2:67351531-67351550 | Msa0266620:CDS | 40.0% |
| ! | TCCAGCAACAAGACCTTTTA+TGG | + | chr2_2:67351535-67351554 | None:intergenic | 40.0% |
| !! | AAAAGGTCTTGTTGCTGGAT+TGG | - | chr2_2:67351536-67351555 | Msa0266620:CDS | 40.0% |
| !! | TCTTGTTGCTGGATTGGTAA+AGG | - | chr2_2:67351542-67351561 | Msa0266620:CDS | 40.0% |
| GAAACATACCATTTCACTCC+AGG | + | chr2_2:67351743-67351762 | None:intergenic | 40.0% | |
| ! | AAGAGAGTTCCCAATCCTTT+TGG | + | chr2_2:67351813-67351832 | None:intergenic | 40.0% |
| TTGCGACTCATTGTAGCAAA+TGG | - | chr2_2:67351854-67351873 | Msa0266620:intron | 40.0% | |
| TGCGACTCATTGTAGCAAAT+GGG | - | chr2_2:67351855-67351874 | Msa0266620:intron | 40.0% | |
| TTTGCAGACAATCTCCAAAG+TGG | - | chr2_2:67352158-67352177 | Msa0266620:CDS | 40.0% | |
| TTGCAGACAATCTCCAAAGT+GGG | - | chr2_2:67352159-67352178 | Msa0266620:CDS | 40.0% | |
| ACTTCATCTCTTGATTCAGC+TGG | - | chr2_2:67352208-67352227 | Msa0266620:CDS | 40.0% | |
| TGAACATGCATATGTGGTAC+TGG | + | chr2_2:67352723-67352742 | None:intergenic | 40.0% | |
| ! | TTACAGGGTTTGTTCAGATC+AGG | - | chr2_2:67352774-67352793 | Msa0266620:intron | 40.0% |
| ACCTGTTCTGTGGTTGATTA+AGG | - | chr2_2:67353012-67353031 | Msa0266620:intron | 40.0% | |
| AGTTAACAGAGCACAAGAGA+TGG | + | chr2_2:67353315-67353334 | None:intergenic | 40.0% | |
| TAACCCACAAACAACCAGAA+GGG | + | chr2_2:67353490-67353509 | None:intergenic | 40.0% | |
| TTAACCCACAAACAACCAGA+AGG | + | chr2_2:67353491-67353510 | None:intergenic | 40.0% | |
| ! | TGGTTGTTTGTGGGTTAACA+TGG | - | chr2_2:67353493-67353512 | Msa0266620:intron | 40.0% |
| ! | AAAGTATTCAGGAAGCTTGC+TGG | - | chr2_2:67353588-67353607 | Msa0266620:intron | 40.0% |
| CTTCCACAAAGAGAGCTTAT+AGG | + | chr2_2:67353675-67353694 | None:intergenic | 40.0% | |
| TAAGCTCTCTTTGTGGAAGT+TGG | - | chr2_2:67353676-67353695 | Msa0266620:CDS | 40.0% | |
| GTCTCATAGCTCCTTCATAT+AGG | - | chr2_2:67353714-67353733 | Msa0266620:CDS | 40.0% | |
| ! | TTTTACGGTGCAGAAGATTC+AGG | - | chr2_2:67353864-67353883 | Msa0266620:intron | 40.0% |
| GATTCATTCGACGGTGAAAG+CGG | - | chr2_2:67348096-67348115 | Msa0266620:three_prime_UTR | 45.0% | |
| ! | TGGTGCCAAGGTTTAAGGAA+TGG | + | chr2_2:67348198-67348217 | None:intergenic | 45.0% |
| ATTCCTTAAACCTTGGCACC+AGG | - | chr2_2:67348197-67348216 | Msa0266620:three_prime_UTR | 45.0% | |
| AAAAAAGCGAGAGAGAGACC+TGG | + | chr2_2:67348218-67348237 | None:intergenic | 45.0% | |
| CTTAACCATGGTATGACGTG+TGG | + | chr2_2:67348405-67348424 | None:intergenic | 45.0% | |
| CACACGTCATACCATGGTTA+AGG | - | chr2_2:67348403-67348422 | Msa0266620:CDS | 45.0% | |
| ATGTTGTGTTGTACACCCTC+CGG | - | chr2_2:67348495-67348514 | Msa0266620:CDS | 45.0% | |
| GGTCAAATCGCTAGAAGTAG+AGG | - | chr2_2:67348788-67348807 | Msa0266620:intron | 45.0% | |
| GAATCGAACTTGAGACCATC+AGG | - | chr2_2:67348895-67348914 | Msa0266620:intron | 45.0% | |
| TCTTACAAACCCACTTGGGT+TGG | + | chr2_2:67348959-67348978 | None:intergenic | 45.0% | |
| ATATAGCCAGCCCTGTTTAG+TGG | - | chr2_2:67349068-67349087 | Msa0266620:intron | 45.0% | |
| TATAGCCAGCCCTGTTTAGT+GGG | - | chr2_2:67349069-67349088 | Msa0266620:intron | 45.0% | |
| TTTATCCCACTAAACAGGGC+TGG | + | chr2_2:67349077-67349096 | None:intergenic | 45.0% | |
| GGCTCTCCATAGCAAAAACT+AGG | + | chr2_2:67349132-67349151 | None:intergenic | 45.0% | |
| ! | TTTGCTATGGAGAGCCTAAC+TGG | - | chr2_2:67349136-67349155 | Msa0266620:intron | 45.0% |
| TTGCTATGGAGAGCCTAACT+GGG | - | chr2_2:67349137-67349156 | Msa0266620:intron | 45.0% | |
| TACTTGATGTGAGGACAGCA+AGG | + | chr2_2:67349817-67349836 | None:intergenic | 45.0% | |
| ATTCAATCTTCTGTGCACCG+CGG | + | chr2_2:67349971-67349990 | None:intergenic | 45.0% | |
| TGAGCACAATTCTGTTGAGG+TGG | - | chr2_2:67350015-67350034 | Msa0266620:CDS | 45.0% | |
| CAAACAGGGAACCTAGATGA+AGG | + | chr2_2:67350041-67350060 | None:intergenic | 45.0% | |
| GTTGAGGGGAAGGTAAAAGA+TGG | + | chr2_2:67350171-67350190 | None:intergenic | 45.0% | |
| ACAAATGATTGTGCAGGCGA+TGG | - | chr2_2:67350306-67350325 | Msa0266620:CDS | 45.0% | |
| CAAATGATTGTGCAGGCGAT+GGG | - | chr2_2:67350307-67350326 | Msa0266620:CDS | 45.0% | |
| CCTCTATCCGAACATCATGA+GGG | + | chr2_2:67350342-67350361 | None:intergenic | 45.0% | |
| CCTCATGATGTTCGGATAGA+GGG | - | chr2_2:67350340-67350359 | Msa0266620:CDS | 45.0% | |
| CTCATGATGTTCGGATAGAG+GGG | - | chr2_2:67350341-67350360 | Msa0266620:CDS | 45.0% | |
| ATGTTCGGATAGAGGGGTTT+CGG | - | chr2_2:67350347-67350366 | Msa0266620:CDS | 45.0% | |
| ! | TCGGCTTGCTCAATGTCTAT+TGG | - | chr2_2:67350366-67350385 | Msa0266620:CDS | 45.0% |
| ATTTGTGGGATGAGAGAGAC+AGG | - | chr2_2:67350538-67350557 | Msa0266620:CDS | 45.0% | |
| TTTGTGGGATGAGAGAGACA+GGG | - | chr2_2:67350539-67350558 | Msa0266620:CDS | 45.0% | |
| TTTCAGTCCCTCCTTTACCA+TGG | + | chr2_2:67350764-67350783 | None:intergenic | 45.0% | |
| !! | TTGCTCTGAGGAGTTATGTG+TGG | - | chr2_2:67350797-67350816 | Msa0266620:intron | 45.0% |
| !! | TGCTCTGAGGAGTTATGTGT+GGG | - | chr2_2:67350798-67350817 | Msa0266620:intron | 45.0% |
| AGTTATGTGTGGGACGTTCT+TGG | - | chr2_2:67350808-67350827 | Msa0266620:intron | 45.0% | |
| GTTATGTGTGGGACGTTCTT+GGG | - | chr2_2:67350809-67350828 | Msa0266620:intron | 45.0% | |
| GGGTGGCTTACAATTCATTG+TGG | - | chr2_2:67350829-67350848 | Msa0266620:CDS | 45.0% | |
| !! | CTGGATTGGTAAAGGAGACT+GGG | - | chr2_2:67351550-67351569 | Msa0266620:CDS | 45.0% |
| ATTGGTAAAGGAGACTGGGA+AGG | - | chr2_2:67351554-67351573 | Msa0266620:CDS | 45.0% | |
| TTTCACTCCAGGACTGAAAG+AGG | + | chr2_2:67351732-67351751 | None:intergenic | 45.0% | |
| CTTTCAGTCCTGGAGTGAAA+TGG | - | chr2_2:67351732-67351751 | Msa0266620:CDS | 45.0% | |
| GCGACTCATTGTAGCAAATG+GGG | - | chr2_2:67351856-67351875 | Msa0266620:intron | 45.0% | |
| ! | CTGCAAAGCATTTGCAAGAG+AGG | + | chr2_2:67352145-67352164 | None:intergenic | 45.0% |
| TGCAGACAATCTCCAAAGTG+GGG | - | chr2_2:67352160-67352179 | Msa0266620:CDS | 45.0% | |
| TCAGATCAGGAATGCAAGAG+AGG | - | chr2_2:67352787-67352806 | Msa0266620:intron | 45.0% | |
| AGAACAGGTTACATAGACCC+TGG | + | chr2_2:67353001-67353020 | None:intergenic | 45.0% | |
| GGTCTATGTAACCTGTTCTG+TGG | - | chr2_2:67353002-67353021 | Msa0266620:intron | 45.0% | |
| GCCTTAATCAACCACAGAAC+AGG | + | chr2_2:67353016-67353035 | None:intergenic | 45.0% | |
| AGAATTGGCTGAAAGCTAGC+TGG | - | chr2_2:67353135-67353154 | Msa0266620:intron | 45.0% | |
| AAACAACCAGAAGGGGGATT+TGG | + | chr2_2:67353482-67353501 | None:intergenic | 45.0% | |
| AACCCACAAACAACCAGAAG+GGG | + | chr2_2:67353489-67353508 | None:intergenic | 45.0% | |
| ! | AGCCATATGTGGAGCTTTGT+TGG | - | chr2_2:67353543-67353562 | Msa0266620:intron | 45.0% |
| AGCCAACAAAGCTCCACATA+TGG | + | chr2_2:67353548-67353567 | None:intergenic | 45.0% | |
| !! | TATGTGGAGCTTTGTTGGCT+TGG | - | chr2_2:67353548-67353567 | Msa0266620:intron | 45.0% |
| !! | TTTGTTGGCTTGGTGAGTTC+TGG | - | chr2_2:67353558-67353577 | Msa0266620:intron | 45.0% |
| !!! | GCTTGGTGAGTTCTGGATTT+TGG | - | chr2_2:67353565-67353584 | Msa0266620:intron | 45.0% |
| TGGCCTATAAGCTCTCTTTG+TGG | - | chr2_2:67353669-67353688 | Msa0266620:intron | 45.0% | |
| TTCTGCAAAGTCCTGTCAGT+AGG | - | chr2_2:67354091-67354110 | Msa0266620:five_prime_UTR | 45.0% | |
| ! | TTTTCTTGCAGCCTACTGAC+AGG | + | chr2_2:67354105-67354124 | None:intergenic | 45.0% |
| AGTAGGCTGCAAGAAAAGCT+TGG | - | chr2_2:67354108-67354127 | Msa0266620:five_prime_UTR | 45.0% | |
| GTAGGCTGCAAGAAAAGCTT+GGG | - | chr2_2:67354109-67354128 | Msa0266620:five_prime_UTR | 45.0% | |
| !! | ATGATATAAAAAAAAAAAAT+TGG | - | chr2_2:67347980-67347999 | Msa0266620:three_prime_UTR | 5.0% |
| ATGGAGAAGACGGCGATGAA+GGG | + | chr2_2:67348179-67348198 | None:intergenic | 50.0% | |
| AATGGAGAAGACGGCGATGA+AGG | + | chr2_2:67348180-67348199 | None:intergenic | 50.0% | |
| ! | AGACCTGGTGCCAAGGTTTA+AGG | + | chr2_2:67348203-67348222 | None:intergenic | 50.0% |
| CGTATCACACATACACCCTC+CGG | + | chr2_2:67348659-67348678 | None:intergenic | 50.0% | |
| CATGTGGTCTCGACATGTTG+TGG | - | chr2_2:67348730-67348749 | Msa0266620:intron | 50.0% | |
| TCGAACTTGAGACCATCAGG+AGG | - | chr2_2:67348898-67348917 | Msa0266620:intron | 50.0% | |
| ATAGAGTGAGCTCCTCCTGA+TGG | + | chr2_2:67348913-67348932 | None:intergenic | 50.0% | |
| ATCAGGAGGAGCTCACTCTA+TGG | - | chr2_2:67348912-67348931 | Msa0266620:intron | 50.0% | |
| ! | TGGCTGGGAGATGTTAGCTT+GGG | + | chr2_2:67348939-67348958 | None:intergenic | 50.0% |
| TTGGCTGGGAGATGTTAGCT+TGG | + | chr2_2:67348940-67348959 | None:intergenic | 50.0% | |
| !! | CACGGTTGCAATAGTGGACT+CGG | + | chr2_2:67349765-67349784 | None:intergenic | 50.0% |
| TGTTGAGGTGGCCTTCATCT+AGG | - | chr2_2:67350027-67350046 | Msa0266620:CDS | 50.0% | |
| CCCTCATGATGTTCGGATAG+AGG | - | chr2_2:67350339-67350358 | Msa0266620:CDS | 50.0% | |
| CCCTCTATCCGAACATCATG+AGG | + | chr2_2:67350343-67350362 | None:intergenic | 50.0% | |
| GCTCAAATTACTCGTTGGGC+TGG | - | chr2_2:67350622-67350641 | Msa0266620:CDS | 50.0% | |
| ! | GGGCTGGCAATCATCATATC+AGG | - | chr2_2:67350638-67350657 | Msa0266620:CDS | 50.0% |
| TGCAAATGAGGAGCAACCTC+TGG | + | chr2_2:67351503-67351522 | None:intergenic | 50.0% | |
| !! | GCTGGATTGGTAAAGGAGAC+TGG | - | chr2_2:67351549-67351568 | Msa0266620:CDS | 50.0% |
| AGTAGCACCTCTTTCAGTCC+TGG | - | chr2_2:67351722-67351741 | Msa0266620:CDS | 50.0% | |
| AGGGGGATTTGGAAGCTCAT+CGG | + | chr2_2:67353471-67353490 | None:intergenic | 50.0% | |
| ! | ATCCCCCTTCTGGTTGTTTG+TGG | - | chr2_2:67353483-67353502 | Msa0266620:intron | 50.0% |
| ! | TCCCCCTTCTGGTTGTTTGT+GGG | - | chr2_2:67353484-67353503 | Msa0266620:intron | 50.0% |
| ACCCACAAACAACCAGAAGG+GGG | + | chr2_2:67353488-67353507 | None:intergenic | 50.0% | |
| CGTAAGGAGGGTAGACCAGA+TGG | - | chr2_2:67348760-67348779 | Msa0266620:intron | 55.0% | |
| AAGGAGGGTAGACCAGATGG+AGG | - | chr2_2:67348763-67348782 | Msa0266620:intron | 55.0% | |
| AGGAGGGTAGACCAGATGGA+GGG | - | chr2_2:67348764-67348783 | Msa0266620:intron | 55.0% | |
| CGATTTGACCACCCTCCATC+TGG | + | chr2_2:67348778-67348797 | None:intergenic | 55.0% | |
| ATCTCCCAGCCAACCCAAGT+GGG | - | chr2_2:67348947-67348966 | Msa0266620:intron | 55.0% | |
| !! | CAAACCCACTTGGGTTGGCT+GGG | + | chr2_2:67348954-67348973 | None:intergenic | 55.0% |
| !! | ACAAACCCACTTGGGTTGGC+TGG | + | chr2_2:67348955-67348974 | None:intergenic | 55.0% |
| TATGGAGAGCCTAACTGGGC+AGG | - | chr2_2:67349141-67349160 | Msa0266620:intron | 55.0% | |
| ATGGAGAGCCTAACTGGGCA+GGG | - | chr2_2:67349142-67349161 | Msa0266620:intron | 55.0% | |
| AAGGTTCTCCCTGCCCAGTT+AGG | + | chr2_2:67349153-67349172 | None:intergenic | 55.0% | |
| AGACAGGGCCGTGTTCCAAA+AGG | - | chr2_2:67350554-67350573 | Msa0266620:CDS | 55.0% | |
| ATGTGTGGGACGTTCTTGGG+TGG | - | chr2_2:67350812-67350831 | Msa0266620:intron | 55.0% | |
| GGGGATTCCGTGAGTGTTCA+TGG | - | chr2_2:67351875-67351894 | Msa0266620:intron | 55.0% | |
| ! | GGAAAAGGTGTGCCCCACTT+TGG | + | chr2_2:67352175-67352194 | None:intergenic | 55.0% |
| GAGCTTCCAAATCCCCCTTC+TGG | - | chr2_2:67353473-67353492 | Msa0266620:intron | 55.0% | |
| ! | GAGAGAGAGACCTGGTGCCA+AGG | + | chr2_2:67348210-67348229 | None:intergenic | 60.0% |
| TCGCGCCACACGTCATACCA+TGG | - | chr2_2:67348397-67348416 | Msa0266620:CDS | 60.0% | |
| AGGGTAGACCAGATGGAGGG+TGG | - | chr2_2:67348767-67348786 | Msa0266620:intron | 60.0% | |
| CATCTCCCAGCCAACCCAAG+TGG | - | chr2_2:67348946-67348965 | Msa0266620:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 67347940 | 67354156 | 67347940 | ID=Msa0266620;Name=Msa0266620 |
| chr2_2 | mRNA | 67347940 | 67354156 | 67347940 | ID=Msa0266620-mRNA-1;Parent=Msa0266620;Name=Msa0266620-mRNA-1;_AED=0.11;_eAED=0.11;_QI=154|0.75|0.77|1|1|1|9|312|998 |
| chr2_2 | exon | 67347940 | 67348696 | 67347940 | ID=Msa0266620-mRNA-1:exon:21451;Parent=Msa0266620-mRNA-1 |
| chr2_2 | exon | 67349288 | 67349440 | 67349288 | ID=Msa0266620-mRNA-1:exon:21450;Parent=Msa0266620-mRNA-1 |
| chr2_2 | exon | 67349812 | 67350695 | 67349812 | ID=Msa0266620-mRNA-1:exon:21449;Parent=Msa0266620-mRNA-1 |
| chr2_2 | exon | 67350824 | 67350989 | 67350824 | ID=Msa0266620-mRNA-1:exon:21448;Parent=Msa0266620-mRNA-1 |
| chr2_2 | exon | 67351173 | 67351621 | 67351173 | ID=Msa0266620-mRNA-1:exon:21447;Parent=Msa0266620-mRNA-1 |
| chr2_2 | exon | 67351709 | 67351842 | 67351709 | ID=Msa0266620-mRNA-1:exon:21446;Parent=Msa0266620-mRNA-1 |
| chr2_2 | exon | 67351941 | 67352442 | 67351941 | ID=Msa0266620-mRNA-1:exon:21445;Parent=Msa0266620-mRNA-1 |
| chr2_2 | exon | 67353672 | 67353810 | 67353672 | ID=Msa0266620-mRNA-1:exon:21444;Parent=Msa0266620-mRNA-1 |
| chr2_2 | exon | 67353878 | 67354156 | 67353878 | ID=Msa0266620-mRNA-1:exon:21443;Parent=Msa0266620-mRNA-1 |
| chr2_2 | five_prime_UTR | 67354003 | 67354156 | 67354003 | ID=Msa0266620-mRNA-1:five_prime_utr;Parent=Msa0266620-mRNA-1 |
| chr2_2 | CDS | 67353878 | 67354002 | 67353878 | ID=Msa0266620-mRNA-1:cds;Parent=Msa0266620-mRNA-1 |
| chr2_2 | CDS | 67353672 | 67353810 | 67353672 | ID=Msa0266620-mRNA-1:cds;Parent=Msa0266620-mRNA-1 |
| chr2_2 | CDS | 67351941 | 67352442 | 67351941 | ID=Msa0266620-mRNA-1:cds;Parent=Msa0266620-mRNA-1 |
| chr2_2 | CDS | 67351709 | 67351842 | 67351709 | ID=Msa0266620-mRNA-1:cds;Parent=Msa0266620-mRNA-1 |
| chr2_2 | CDS | 67351173 | 67351621 | 67351173 | ID=Msa0266620-mRNA-1:cds;Parent=Msa0266620-mRNA-1 |
| chr2_2 | CDS | 67350824 | 67350989 | 67350824 | ID=Msa0266620-mRNA-1:cds;Parent=Msa0266620-mRNA-1 |
| chr2_2 | CDS | 67349812 | 67350695 | 67349812 | ID=Msa0266620-mRNA-1:cds;Parent=Msa0266620-mRNA-1 |
| chr2_2 | CDS | 67349288 | 67349440 | 67349288 | ID=Msa0266620-mRNA-1:cds;Parent=Msa0266620-mRNA-1 |
| chr2_2 | CDS | 67348252 | 67348696 | 67348252 | ID=Msa0266620-mRNA-1:cds;Parent=Msa0266620-mRNA-1 |
| chr2_2 | three_prime_UTR | 67347940 | 67348251 | 67347940 | ID=Msa0266620-mRNA-1:three_prime_utr;Parent=Msa0266620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
