AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0115020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0115020 MtrunA17_Chr1g0161431 89.331 628 26 3 1 589 1 626 0.0 1050
Msa0115020 MtrunA17_Chr4g0067981 51.235 324 117 6 10 298 28 345 2.34e-92 298
Msa0115020 MtrunA17_Chr2g0294911 52.597 308 106 4 10 284 26 326 3.95e-90 290
Msa0115020 MtrunA17_Chr3g0123131 50.368 272 97 3 12 250 12 278 1.63e-76 253
Msa0115020 MtrunA17_Chr8g0376881 50.370 270 96 4 13 250 25 288 2.54e-76 252
Msa0115020 MtrunA17_Chr3g0137101 47.651 298 103 6 9 268 4 286 4.52e-73 246
Msa0115020 MtrunA17_Chr1g0149841 46.538 260 103 3 12 239 4 259 4.13e-65 221
Msa0115020 MtrunA17_Chr2g0304841 44.040 302 124 6 13 273 18 315 1.83e-62 218
Msa0115020 MtrunA17_Chr4g0074411 43.151 292 124 6 13 273 18 298 3.19e-61 213
Msa0115020 MtrunA17_Chr4g0074401 42.532 308 128 8 2 273 6 300 7.26e-60 209
Msa0115020 MtrunA17_Chr7g0275891 40.864 301 106 8 12 257 4 287 3.64e-57 196
Msa0115020 MtrunA17_Chr4g0074421 55.435 184 72 5 43 225 13 187 1.16e-54 184
Msa0115020 MtrunA17_Chr1g0149831 50.000 198 91 3 43 239 3 193 1.53e-54 184
Msa0115020 MtrunA17_Chr1g0149851 40.647 278 96 4 12 233 4 268 5.76e-53 189
Msa0115020 MtrunA17_Chr7g0275401 37.710 297 124 4 12 263 4 284 9.68e-52 179
Msa0115020 MtrunA17_Chr4g0009851 38.866 247 91 4 11 227 9 225 3.61e-49 173
Msa0115020 MtrunA17_Chr4g0009901 40.244 246 87 4 13 228 10 225 4.93e-49 171
Msa0115020 MtrunA17_Chr4g0009981 40.933 193 84 1 35 227 10 172 1.29e-42 154
Msa0115020 MtrunA17_Chr6g0471041 35.887 248 95 6 12 227 13 228 3.16e-37 143
Msa0115020 MtrunA17_Chr3g0134461 36.475 244 68 4 9 220 4 192 8.06e-32 122
Msa0115020 MtrunA17_Chr8g0391911 31.621 253 109 5 13 220 9 242 1.37e-28 114
Msa0115020 MtrunA17_Chr3g0134481 46.099 141 40 2 10 119 5 140 1.29e-26 107
Msa0115020 MtrunA17_Chr3g0134481 61.111 54 21 0 169 222 130 183 1.99e-16 77.8
Msa0115020 MtrunA17_Chr6g0473731 35.751 193 94 5 62 253 10 173 9.12e-26 110
Msa0115020 MtrunA17_Chr4g0011071 34.839 155 71 1 43 197 50 174 1.97e-25 103
Msa0115020 MtrunA17_Chr4g0009991 42.177 147 54 3 74 220 1 116 2.62e-25 101
Msa0115020 MtrunA17_Chr8g0383961 35.526 152 65 3 11 131 12 161 1.16e-21 95.1
Msa0115020 MtrunA17_Chr4g0031961 58.442 77 28 1 157 229 113 189 1.32e-21 95.9
Msa0115020 MtrunA17_Chr7g0255711 64.516 62 22 0 168 229 88 149 1.88e-20 92.4
Msa0115020 MtrunA17_Chr4g0040481 37.778 135 72 2 107 229 82 216 2.56e-17 84.7
Msa0115020 MtrunA17_Chr5g0400241 60.000 60 24 0 170 229 310 369 3.84e-17 84.7
Msa0115020 MtrunA17_Chr4g0054981 60.000 60 24 0 170 229 309 368 1.53e-16 82.8
Msa0115020 MtrunA17_Chr2g0324891 56.061 66 29 0 164 229 154 219 5.62e-16 80.5
Msa0115020 MtrunA17_Chr6g0456631 26.220 164 89 2 12 143 8 171 2.18e-15 74.3
Msa0115020 MtrunA17_Chr5g0417521 57.627 59 24 1 167 224 11 69 4.71e-15 77.0
Msa0115020 MtrunA17_Chr6g0469321 64.151 53 19 0 187 239 70 122 1.08e-14 72.4
Msa0115020 MtrunA17_Chr6g0461641 46.753 77 32 2 167 242 38 106 3.78e-14 74.7
Msa0115020 MtrunA17_Chr3g0127941 35.772 123 43 3 17 104 56 177 4.28e-14 75.5
Msa0115020 MtrunA17_Chr4g0042451 54.237 59 26 1 167 224 13 71 8.41e-14 73.2
Msa0115020 MtrunA17_Chr7g0276361 31.677 161 67 4 14 131 11 171 8.62e-14 74.3
Msa0115020 MtrunA17_Chr2g0321461 54.237 59 26 1 167 224 41 99 9.85e-14 73.2
Msa0115020 MtrunA17_Chr2g0310011 59.322 59 23 1 167 224 31 89 1.19e-13 72.8
Msa0115020 MtrunA17_Chr8g0356501 59.322 59 23 1 167 224 33 91 1.38e-13 72.4
Msa0115020 MtrunA17_Chr8g0350761 24.803 254 145 5 15 223 19 271 1.58e-13 73.2
Msa0115020 MtrunA17_Chr1g0198601 51.471 68 32 1 164 230 204 271 1.68e-13 72.4
Msa0115020 MtrunA17_Chr4g0030271 29.375 160 69 3 17 132 89 248 4.02e-13 72.4
Msa0115020 MtrunA17_Chr7g0274471 62.963 54 19 1 171 223 218 271 1.29e-12 70.1
Msa0115020 MtrunA17_Chr5g0402631 48.649 74 37 1 168 240 211 284 1.49e-12 69.3
Msa0115020 MtrunA17_Chr5g0422621 47.143 70 36 1 170 238 197 266 2.77e-12 68.6
Msa0115020 MtrunA17_Chr4g0062921 48.052 77 37 2 163 238 227 301 3.59e-12 68.6
Msa0115020 MtrunA17_Chr7g0261911 52.381 63 29 1 167 228 258 320 4.13e-12 68.9
Msa0115020 MtrunA17_Chr1g0181811 28.834 163 72 3 17 135 85 247 4.94e-12 68.9
Msa0115020 MtrunA17_Chr1g0197171 58.182 55 22 1 171 224 44 98 5.32e-12 67.0
Msa0115020 MtrunA17_Chr4g0045361 52.381 63 29 1 168 229 271 333 5.38e-12 68.2
Msa0115020 MtrunA17_Chr1g0190301 52.941 68 25 2 163 223 161 228 7.18e-12 67.4
Msa0115020 MtrunA17_Chr3g0091641 27.317 205 102 6 17 174 24 228 1.31e-11 67.4
Msa0115020 MtrunA17_Chr7g0254981 54.545 55 24 1 171 224 50 104 1.76e-11 65.1
Msa0115020 MtrunA17_Chr2g0290991 48.649 74 33 2 152 224 24 93 3.47e-11 64.7
Msa0115020 MtrunA17_Chr1g0175081 47.458 59 30 1 167 224 18 76 6.50e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0115020 AT3G16857.1 48.447 322 117 4 13 285 33 354 5.57e-86 281
Msa0115020 AT3G16857.2 48.447 322 117 4 13 285 33 354 1.31e-85 281
Msa0115020 AT2G01760.1 50.318 314 100 7 12 287 6 301 5.63e-82 262
Msa0115020 AT3G16857.3 52.075 265 109 3 39 285 20 284 1.96e-78 260
Msa0115020 AT2G01760.3 55.378 251 87 6 44 287 4 236 4.41e-73 237
Msa0115020 AT2G01760.2 54.902 255 90 6 40 287 93 329 1.45e-72 238
Msa0115020 AT2G25180.1 49.430 263 93 4 12 242 12 266 2.33e-68 233
Msa0115020 AT1G67710.1 52.157 255 81 6 10 229 4 252 3.82e-67 227
Msa0115020 AT4G31920.1 45.312 256 90 3 12 236 12 248 1.26e-60 211
Msa0115020 AT1G67710.2 58.639 191 69 5 43 229 3 187 2.63e-58 202
Msa0115020 AT5G58080.1 41.026 312 125 6 12 280 13 308 1.53e-53 193
Msa0115020 AT1G67710.3 54.335 173 69 5 61 229 12 178 2.87e-44 164
Msa0115020 AT5G49240.1 35.094 265 120 7 10 236 35 285 3.52e-36 137
Msa0115020 AT1G49190.1 30.132 302 146 6 4 254 15 302 8.84e-32 127
Msa0115020 AT3G62670.1 33.455 275 144 8 40 298 93 344 1.00e-31 128
Msa0115020 AT5G07210.2 31.020 245 133 8 18 230 41 281 4.01e-23 104
Msa0115020 AT5G07210.1 30.488 246 135 8 17 230 48 289 2.03e-22 102
Msa0115020 AT5G59570.2 51.163 86 42 0 152 237 122 207 3.71e-22 97.8
Msa0115020 AT5G59570.1 51.163 86 42 0 152 237 122 207 3.71e-22 97.8
Msa0115020 AT5G05090.1 62.687 67 24 1 164 229 73 139 2.98e-21 94.4
Msa0115020 AT3G46640.2 56.000 75 33 0 155 229 128 202 4.44e-21 95.1
Msa0115020 AT3G46640.1 56.000 75 33 0 155 229 128 202 4.44e-21 95.1
Msa0115020 AT3G46640.3 56.000 75 33 0 155 229 128 202 5.97e-21 94.7
Msa0115020 AT3G10760.1 62.687 67 24 1 164 229 97 163 7.19e-21 94.7
Msa0115020 AT2G40970.1 62.903 62 23 0 168 229 102 163 1.40e-20 92.0
Msa0115020 AT5G44190.2 42.520 127 66 3 162 284 141 264 5.67e-19 89.4
Msa0115020 AT5G44190.1 64.706 68 21 1 162 229 141 205 7.41e-19 89.4
Msa0115020 AT1G49190.2 34.286 140 55 2 4 106 15 154 6.89e-17 84.7
Msa0115020 AT2G27070.1 27.240 279 135 8 17 235 16 286 3.04e-16 82.4
Msa0115020 AT4G18020.3 34.586 133 78 1 106 229 222 354 4.53e-16 82.0
Msa0115020 AT4G18020.2 34.586 133 78 1 106 229 222 354 4.53e-16 82.0
Msa0115020 AT4G18020.1 34.586 133 78 1 106 229 222 354 4.53e-16 82.0
Msa0115020 AT4G18020.6 34.586 133 78 1 106 229 222 354 4.53e-16 82.0
Msa0115020 AT4G18020.9 34.586 133 78 1 106 229 222 354 4.53e-16 82.0
Msa0115020 AT4G18020.8 34.586 133 78 1 106 229 222 354 4.78e-16 81.6
Msa0115020 AT4G18020.11 34.586 133 78 1 106 229 222 354 4.78e-16 81.6
Msa0115020 AT4G18020.4 34.586 133 78 1 106 229 222 354 4.78e-16 81.6
Msa0115020 AT4G18020.5 34.586 133 78 1 106 229 222 354 4.78e-16 81.6
Msa0115020 AT4G18020.10 34.586 133 78 1 106 229 222 354 4.78e-16 81.6
Msa0115020 AT4G18020.7 34.586 133 78 1 106 229 222 354 4.78e-16 81.6
Msa0115020 AT2G20570.1 48.810 84 41 1 146 229 130 211 4.93e-16 81.3
Msa0115020 AT2G20570.2 64.912 57 20 0 173 229 171 227 1.43e-15 79.7
Msa0115020 AT3G04030.1 55.932 59 25 1 167 224 41 99 3.94e-14 75.1
Msa0115020 AT3G04030.3 55.932 59 25 1 167 224 41 99 4.40e-14 74.7
Msa0115020 AT5G18240.2 57.627 59 24 1 167 224 41 99 5.14e-14 74.7
Msa0115020 AT5G18240.3 57.627 59 24 1 167 224 41 99 5.14e-14 74.7
Msa0115020 AT5G18240.5 57.627 59 24 1 167 224 41 99 5.61e-14 74.7
Msa0115020 AT5G18240.1 57.627 59 24 1 167 224 41 99 5.98e-14 74.3
Msa0115020 AT5G18240.4 57.627 59 24 1 167 224 41 99 5.98e-14 74.3
Msa0115020 AT1G79430.2 59.322 59 23 1 167 224 30 88 1.65e-13 72.8
Msa0115020 AT3G24120.2 57.627 59 24 1 167 224 37 95 1.93e-13 71.6
Msa0115020 AT3G24120.1 57.627 59 24 1 167 224 37 95 1.99e-13 71.6
Msa0115020 AT5G24470.1 34.677 124 45 3 16 104 49 171 3.82e-13 72.8
Msa0115020 AT4G13640.2 57.627 59 24 1 167 224 33 91 4.48e-13 70.5
Msa0115020 AT4G13640.1 57.627 59 24 1 167 224 33 91 4.75e-13 70.5
Msa0115020 AT3G04030.2 51.724 58 28 0 167 224 41 98 5.48e-13 71.6
Msa0115020 AT1G69580.2 52.542 59 27 1 167 224 30 88 6.60e-13 70.9
Msa0115020 AT1G69580.1 52.542 59 27 1 167 224 30 88 6.67e-13 70.5
Msa0115020 AT2G46790.1 33.065 124 47 3 17 105 37 159 1.31e-12 70.9
Msa0115020 AT2G46790.3 33.065 124 47 3 17 105 37 159 1.38e-12 70.5
Msa0115020 AT3G12730.1 54.237 59 26 1 167 224 19 77 2.42e-12 67.4
Msa0115020 AT5G45580.1 52.727 55 25 1 171 224 7 61 1.65e-11 65.5
Msa0115020 AT2G01060.1 50.725 69 31 2 159 224 1 69 1.77e-11 65.9
Msa0115020 AT3G04450.3 51.724 58 27 1 167 223 234 291 4.03e-11 65.1
Msa0115020 AT5G29000.4 55.172 58 24 2 167 223 228 284 6.13e-11 64.3
Msa0115020 AT3G04450.1 51.724 58 27 1 167 223 234 291 6.13e-11 65.5
Msa0115020 AT3G04450.4 51.724 58 27 1 167 223 194 251 6.30e-11 65.1
Msa0115020 AT3G04450.2 51.724 58 27 1 167 223 194 251 6.30e-11 65.1
Msa0115020 AT5G29000.1 55.172 58 24 2 167 223 185 241 8.72e-11 64.3
Msa0115020 AT5G29000.3 55.172 58 24 2 167 223 185 241 8.72e-11 64.3
Msa0115020 AT2G03500.1 48.438 64 32 1 168 230 230 293 9.65e-11 64.7

Find 156 sgRNAs with CRISPR-Local

Find 512 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTGAATATTGTTATTTA+TGG 0.028003 1_3:-33524375 None:intergenic
TGAAGAGCTGCAAGTGTTTC+AGG 0.164593 1_3:-33523780 None:intergenic
AACGAGCTCCGGTGAGTTTC+CGG 0.202869 1_3:+33518409 Msa0115020:CDS
ATGGCTTCTTGCCGGAAAAT+TGG 0.269998 1_3:+33525238 Msa0115020:three_prime_UTR
TCTTTGTTTATAATGTAAAA+TGG 0.270598 1_3:+33525274 Msa0115020:three_prime_UTR
GTGAGTTTCCGGCTGGGTTA+AGG 0.272505 1_3:+33518420 Msa0115020:CDS
GCCGGAAAATTGGTATTTAT+AGG 0.276766 1_3:+33525248 Msa0115020:three_prime_UTR
ATTTCAACTGATTGAACTAA+TGG 0.292501 1_3:+33525219 Msa0115020:three_prime_UTR
CTTAGAAATCTTGGATTTGT+TGG 0.296022 1_3:+33524515 Msa0115020:CDS
CCGGAAAATTGGTATTTATA+GGG 0.296373 1_3:+33525249 Msa0115020:three_prime_UTR
GCTCTTCAGGCGGAGCTCTT+AGG 0.299128 1_3:+33523795 Msa0115020:CDS
TTCAAGTGCATTCACTTAAT+AGG 0.309196 1_3:+33524724 Msa0115020:exon
GTCAACAAGGATAGCAGTTT+TGG 0.309228 1_3:+33524221 Msa0115020:CDS
AATAAGGAACATGATAATTC+TGG 0.316091 1_3:+33521938 Msa0115020:CDS
TGAAACACTTGCAGCTCTTC+AGG 0.318742 1_3:+33523782 Msa0115020:CDS
TAAAATCATTTGCAGATGAT+TGG 0.319690 1_3:-33524574 None:intergenic
TGAGTTTCCGGCTGGGTTAA+GGG 0.325512 1_3:+33518421 Msa0115020:CDS
TAGTCAAATGAAAGTATTCA+TGG 0.326858 1_3:+33524595 Msa0115020:CDS
ATATGACTCGGTTCCTCCTT+TGG 0.330245 1_3:-33524647 None:intergenic
GAAGTATGTCTTAGAAATCT+TGG 0.340115 1_3:+33524506 Msa0115020:CDS
CAAAACTCAACTTTAACATT+TGG 0.341966 1_3:+33524401 Msa0115020:CDS
GAATCCAAGCTTGCTGCTAC+TGG 0.348004 1_3:+33523714 Msa0115020:CDS
ATCATTTCGAGTATTCTCTT+TGG 0.348591 1_3:-33522343 None:intergenic
ATACAGGCTTTGGCTGGTTC+TGG 0.349018 1_3:+33523747 Msa0115020:CDS
GATGACTCTAACTCTGATAA+AGG 0.352635 1_3:+33525094 Msa0115020:three_prime_UTR
AAATGTTGCAAGTCATTTGC+AGG 0.369685 1_3:+33522390 Msa0115020:CDS
GATGAGTCATCATCAGTATA+TGG 0.370458 1_3:+33523966 Msa0115020:CDS
AGAGGATATTTGAGGAGAAA+TGG 0.372882 1_3:-33524339 None:intergenic
TGGAAGAACTAAGGAATATA+TGG 0.378920 1_3:+33521885 Msa0115020:CDS
GTAGGCATTATGTTAGTTGC+CGG 0.379535 1_3:-33523822 None:intergenic
GACAACACTTCTTCTGTTGC+TGG 0.380394 1_3:+33522007 Msa0115020:CDS
GACCAGTTCTTACTAATAAC+AGG 0.381518 1_3:-33521698 None:intergenic
TTGAACTAATGGCTTCTTGC+CGG 0.385342 1_3:+33525230 Msa0115020:three_prime_UTR
TCAATCTTCTAATACCTTCC+AGG 0.399165 1_3:+33524178 Msa0115020:CDS
GATGGATAATTCTGTAGAAC+TGG 0.405841 1_3:-33524692 None:intergenic
TCGCTGGATTTAATATCATA+TGG 0.407074 1_3:-33524473 None:intergenic
CGAGGCTTCTTAGATGTAGA+TGG 0.408023 1_3:-33522109 None:intergenic
AGAACTGGGTGGCTCGCATT+TGG 0.408581 1_3:-33524677 None:intergenic
AATCTTGGATTTGTTGGAAA+AGG 0.408723 1_3:+33524521 Msa0115020:CDS
GTGGAAACAATATGTACCTT+TGG 0.409451 1_3:-33525003 None:intergenic
GCTGATGCTGGTGCCGTTGT+TGG 0.410400 1_3:-33524079 None:intergenic
CAATAGCTGCACATGTAACT+TGG 0.410478 1_3:+33525146 Msa0115020:three_prime_UTR
ATCAGAGTTAGAGTCATCAT+TGG 0.420176 1_3:-33525089 None:intergenic
TCTGTTGCTGGTGCAACAAA+AGG 0.420915 1_3:+33522019 Msa0115020:CDS
AGCTCCGGTGAGTTTCCGGC+TGG 0.423241 1_3:+33518413 Msa0115020:CDS
TGAACATGTTGGGTTGGAAA+TGG 0.424268 1_3:+33521670 Msa0115020:CDS
AATTCATAAACTAGTTTGTA+GGG 0.428890 1_3:+33525179 Msa0115020:three_prime_UTR
GGGATGTTAAACACAGTTCA+TGG 0.434178 1_3:+33523684 Msa0115020:CDS
ATAAACTCCTTGAACATGTT+GGG 0.438608 1_3:+33521660 Msa0115020:CDS
TAATTCATAAACTAGTTTGT+AGG 0.439580 1_3:+33525178 Msa0115020:three_prime_UTR
TTTCCAACCCAACATGTTCA+AGG 0.451146 1_3:-33521667 None:intergenic
AGTTACATGTGCAGCTATTG+AGG 0.453181 1_3:-33525143 None:intergenic
TGTTCAACCATCTTGCTTGG+TGG 0.455635 1_3:+33524148 Msa0115020:CDS
TGATTGACTATAATCAATAA+TGG 0.457615 1_3:-33524252 None:intergenic
AAGATATGACATACAGGCTT+TGG 0.459864 1_3:+33523737 Msa0115020:CDS
AAAAGATGAAGATGTTGAGT+TGG 0.460862 1_3:+33522075 Msa0115020:CDS
TCTTCCAGTAGCAGCAAGCT+TGG 0.461683 1_3:-33523718 None:intergenic
TCAGAGTTAGAGTCATCATT+GGG 0.472208 1_3:-33525088 None:intergenic
AATATGTACCTTTGGAGGTA+AGG 0.472769 1_3:-33524995 None:intergenic
CTTAGTTCTTCCATCCGTAC+AGG 0.475894 1_3:-33521875 None:intergenic
TCTCTTCGCTGTCATTATCA+AGG 0.476993 1_3:+33518494 Msa0115020:CDS
TCTGAGTTAAAGAGAGAAGA+GGG 0.478441 1_3:-33518260 None:intergenic
AGGTTAGTATATATGAATGT+TGG 0.479087 1_3:+33525114 Msa0115020:three_prime_UTR
ACTAATGCATGCATCTGTAC+AGG 0.484480 1_3:+33523860 Msa0115020:CDS
CAATGTTCAACCATCTTGCT+TGG 0.486283 1_3:+33524145 Msa0115020:CDS
TACTTCATCAAGTGAATCGC+TGG 0.487337 1_3:-33524489 None:intergenic
GGATATTTGAGGAGAAATGG+AGG 0.494211 1_3:-33524336 None:intergenic
TATAAACTCCTTGAACATGT+TGG 0.495307 1_3:+33521659 Msa0115020:CDS
CAGTGATGTCTGTTGATGAT+AGG 0.497216 1_3:+33521798 Msa0115020:intron
GAAGAGCTGCAAGTGTTTCA+GGG 0.504164 1_3:-33523779 None:intergenic
CACAGTGAAGGAGGAGCCAA+AGG 0.506659 1_3:+33524631 Msa0115020:CDS
TATGACATACAGGCTTTGGC+TGG 0.508995 1_3:+33523741 Msa0115020:CDS
GTAGCTCTTGTGTCTCCGCC+AGG 0.509868 1_3:-33524314 None:intergenic
GTCTAAGTGTCAAGGGGAGA+AGG 0.513330 1_3:-33524445 None:intergenic
AATTTAGACTTTATTTGAAG+AGG 0.514433 1_3:+33523634 Msa0115020:CDS
GCTGCACATGTAACTTGGAA+TGG 0.523756 1_3:+33525151 Msa0115020:three_prime_UTR
TCGAGTTCATGTCAATATCC+TGG 0.525235 1_3:+33524296 Msa0115020:CDS
CTCGTTCTCTGCAACGACGC+AGG 0.525983 1_3:-33518392 None:intergenic
ACTCCTTGAACATGTTGGGT+TGG 0.526711 1_3:+33521664 Msa0115020:CDS
AGTGTCAAGGGGAGAAGGCT+AGG 0.528820 1_3:-33524440 None:intergenic
TTCGAGTATTCTCTTTGGCA+CGG 0.530409 1_3:-33522338 None:intergenic
GTGGTGGCGCATCAACAGAA+TGG 0.530597 1_3:+33523663 Msa0115020:CDS
TACTGGAAGATATGACATAC+AGG 0.531861 1_3:+33523731 Msa0115020:CDS
TAGGCATTATGTTAGTTGCC+GGG 0.533217 1_3:-33523821 None:intergenic
GCATAGCTGCTTCTTACGTA+GGG 0.535537 1_3:-33518370 None:intergenic
CTAATGCATGCATCTGTACA+GGG 0.539995 1_3:+33523861 Msa0115020:CDS
AAGCAACACTATTTACTGCC+TGG 0.549477 1_3:-33524196 None:intergenic
TGGCCGCCGTCTAGTACACT+CGG 0.552222 1_3:+33523993 Msa0115020:CDS
GGCGGAGCTCTTAGGTCACC+CGG 0.553138 1_3:+33523803 Msa0115020:CDS
TAGGACAAGTACTGTCATGA+AGG 0.556092 1_3:+33521817 Msa0115020:CDS
AACACTATTTACTGCCTGGA+AGG 0.557646 1_3:-33524192 None:intergenic
CTCGAAATGATGAATGTCCC+TGG 0.557903 1_3:+33522355 Msa0115020:CDS
GGAACTTGTCTAAGTGTCAA+GGG 0.557917 1_3:-33524452 None:intergenic
TTTGAAGAGGTTAAGTGTGG+TGG 0.558644 1_3:+33523647 Msa0115020:CDS
TCAATCTCAAGTGGAAGGTT+AGG 0.559134 1_3:+33524017 Msa0115020:CDS
TCGTTGCAGAGAACGAGCTC+CGG 0.559573 1_3:+33518398 Msa0115020:CDS
TAACCCAGCCGGAAACTCAC+CGG 0.561846 1_3:-33518417 None:intergenic
GAAACAATATGTACCTTTGG+AGG 0.562969 1_3:-33525000 None:intergenic
ATCTGAGTTAAAGAGAGAAG+AGG 0.563869 1_3:-33518261 None:intergenic
AAATTATTGACGATGTCGAA+AGG 0.566946 1_3:-33523921 None:intergenic
TGGAACTTGTCTAAGTGTCA+AGG 0.569185 1_3:-33524453 None:intergenic
CTGTACGGATGGAAGAACTA+AGG 0.571403 1_3:+33521876 Msa0115020:CDS
AGATAATGATCGCAATACAC+GGG 0.572667 1_3:+33521970 Msa0115020:CDS
ATGCATGCATTAGTGCAGTC+CGG 0.579695 1_3:-33523851 None:intergenic
AATTATTGACGATGTCGAAA+GGG 0.582045 1_3:-33523920 None:intergenic
ATATATGGCAGCATGTTGCT+AGG 0.583349 1_3:+33521900 Msa0115020:CDS
TGGTGGCGCATCAACAGAAT+GGG 0.586758 1_3:+33523664 Msa0115020:CDS
GGCATAGCTGCTTCTTACGT+AGG 0.586957 1_3:-33518371 None:intergenic
AGTGCAGTCCGGTCCACTGT+AGG 0.587668 1_3:-33523840 None:intergenic
ACATAATGCCTACAGTGGAC+CGG 0.591447 1_3:+33523832 Msa0115020:CDS
TTATTTGAAGAGGTTAAGTG+TGG 0.592282 1_3:+33523644 Msa0115020:CDS
AAGATAATGATCGCAATACA+CGG 0.600067 1_3:+33521969 Msa0115020:CDS
AAAGTATTCATGGCTAGCAA+TGG 0.600983 1_3:+33524605 Msa0115020:CDS
ACAAGAACCCTTAACCCAGC+CGG 0.601519 1_3:-33518428 None:intergenic
CAATGGTAACACAGTGAAGG+AGG 0.603246 1_3:+33524622 Msa0115020:CDS
GTCAGTGCTGTAAATCAACT+AGG 0.604605 1_3:+33522166 Msa0115020:CDS
AAGGTATTAGAAGATTGAGC+AGG 0.607200 1_3:-33524173 None:intergenic
TCATGAAGGGAATTAGACAC+GGG 0.611444 1_3:+33521831 Msa0115020:CDS
TAGTGTTGCTTCTGTCAACA+AGG 0.611545 1_3:+33524208 Msa0115020:CDS
AGAGAAGACCTTACCTCCAA+AGG 0.611795 1_3:+33524987 Msa0115020:three_prime_UTR
GGATGTTAAACACAGTTCAT+GGG 0.616102 1_3:+33523685 Msa0115020:CDS
GCTCCGGTGAGTTTCCGGCT+GGG 0.616703 1_3:+33518414 Msa0115020:CDS
TTTGGATATCTGATATGACT+CGG 0.618478 1_3:-33524659 None:intergenic
CATCATCAGTATATGGAGCA+TGG 0.620082 1_3:+33523973 Msa0115020:CDS
AACACTTGCAGCTCTTCAGG+CGG 0.620247 1_3:+33523785 Msa0115020:CDS
GCAGGAACCACCAAGCAAGA+TGG 0.620808 1_3:-33524155 None:intergenic
AGGACAAGTACTGTCATGAA+GGG 0.622788 1_3:+33521818 Msa0115020:CDS
GACGATGTCGAAAGGGCTGT+AGG 0.623972 1_3:-33523913 None:intergenic
GCACTTGAATGATCATGAGA+TGG 0.624506 1_3:-33524710 None:intergenic
GTCATGAAGGGAATTAGACA+CGG 0.627814 1_3:+33521830 Msa0115020:CDS
CAAGTGTTTCAGGGGAAACG+TGG 0.629851 1_3:-33523770 None:intergenic
CTAAGAAGCCTCGTGTAGTG+TGG 0.636384 1_3:+33522119 Msa0115020:CDS
AAGGGGAGAAGGCTAGGCAA+TGG 0.637218 1_3:-33524434 None:intergenic
TCGGGTCAATCTCAAGTGGA+AGG 0.637487 1_3:+33524012 Msa0115020:CDS
AAGAGCTGCAAGTGTTTCAG+GGG 0.639399 1_3:-33523778 None:intergenic
TAGCAATGGTAACACAGTGA+AGG 0.641107 1_3:+33524619 Msa0115020:CDS
AGTGAAGGAGGAGCCAAAGG+AGG 0.646617 1_3:+33524634 Msa0115020:CDS
GTTCATATGCCAGACATGGA+TGG 0.651624 1_3:+33521635 Msa0115020:intron
ACACTCGGGTCAATCTCAAG+TGG 0.652626 1_3:+33524008 Msa0115020:CDS
ATATATTGCAGCACCAACAA+CGG 0.653116 1_3:+33524066 Msa0115020:CDS
GAACTTGTCTAAGTGTCAAG+GGG 0.665309 1_3:-33524451 None:intergenic
GATAATGATCGCAATACACG+GGG 0.671509 1_3:+33521971 Msa0115020:CDS
GGCCGCCGTCTAGTACACTC+GGG 0.673948 1_3:+33523994 Msa0115020:CDS
CGTGCAGAATAGTAACACAC+TGG 0.679139 1_3:+33524040 Msa0115020:CDS
AGTTCTTACTAATAACAGGA+AGG 0.681007 1_3:-33521694 None:intergenic
TCTACTGACCACACTACACG+AGG 0.699174 1_3:-33522127 None:intergenic
CATAGCTGCTTCTTACGTAG+GGG 0.699792 1_3:-33518369 None:intergenic
GATAATTCTGTAGAACTGGG+TGG 0.703628 1_3:-33524688 None:intergenic
AACTAACATAATGCCTACAG+TGG 0.706212 1_3:+33523827 Msa0115020:CDS
TAATGCATGCATCTGTACAG+GGG 0.713759 1_3:+33523862 Msa0115020:CDS
ATGGATAATTCTGTAGAACT+GGG 0.722325 1_3:-33524691 None:intergenic
CATGAAGGGAATTAGACACG+GGG 0.726759 1_3:+33521832 Msa0115020:CDS
AGTTCATGTCAATATCCTGG+CGG 0.734679 1_3:+33524299 Msa0115020:CDS
GACCCGAGTGTACTAGACGG+CGG 0.735269 1_3:-33523996 None:intergenic
ATTGACCCGAGTGTACTAGA+CGG 0.751718 1_3:-33523999 None:intergenic
ATAATGATCGCAATACACGG+GGG 0.815289 1_3:+33521972 Msa0115020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATTTTTATTTTTATTT+AGG + chr1_3:33521225-33521244 Msa0115020:intron 0.0%
!! ATAATTATTTAATCAGTAAA+TGG - chr1_3:33519953-33519972 None:intergenic 10.0%
!!! ATTAAATAATTATTTGTTGT+TGG + chr1_3:33519960-33519979 Msa0115020:intron 10.0%
!! ATAAATGAATAAACATTAAA+TGG - chr1_3:33520123-33520142 None:intergenic 10.0%
!! TTATTCATTTATTTATTTGA+AGG + chr1_3:33520131-33520150 Msa0115020:intron 10.0%
!! TATTCATTTATTTATTTGAA+GGG + chr1_3:33520132-33520151 Msa0115020:intron 10.0%
!!! TTTTGTATTTAAATTAGTTA+GGG - chr1_3:33521463-33521482 None:intergenic 10.0%
!!! GTCATTTTTTTATTTTTTTT+TGG - chr1_3:33521368-33521387 None:intergenic 10.0%
!!! TTTTGTATTTAAATTAGTTA+GGG + chr1_3:33521463-33521482 Msa0115020:intron 10.0%
!! TCATCATAAATAAAAAATAA+TGG - chr1_3:33524771-33524790 None:intergenic 10.0%
!! TAAGGTTTAGTAATAAAAAA+GGG - chr1_3:33519511-33519530 None:intergenic 15.0%
!! AAATTTACCAAAATGTATAA+AGG - chr1_3:33520177-33520196 None:intergenic 15.0%
!!! ATTTTGGTAAATTTCTATTT+TGG + chr1_3:33520183-33520202 Msa0115020:intron 15.0%
!! TTTGTATTTAAATTAGTTAG+GGG - chr1_3:33521464-33521483 None:intergenic 15.0%
!!! GTTTTGTATTTAAATTAGTT+AGG - chr1_3:33521462-33521481 None:intergenic 15.0%
!!! GTTTTGTATTTAAATTAGTT+AGG + chr1_3:33521462-33521481 Msa0115020:intron 15.0%
!! TTTGTATTTAAATTAGTTAG+GGG + chr1_3:33521464-33521483 Msa0115020:intron 15.0%
!!! GAAAATTTTGAATGAAAATA+AGG + chr1_3:33521922-33521941 Msa0115020:CDS 15.0%
!! AATAGAAAGAAAAAAAAAGT+TGG - chr1_3:33522210-33522229 None:intergenic 15.0%
!! TTTATTAAATGCTAGATATA+CGG + chr1_3:33522584-33522603 Msa0115020:intron 15.0%
!!! TATTTTGGGTTTTAAATATT+AGG + chr1_3:33523109-33523128 Msa0115020:intron 15.0%
!! AACAGTATTTAAATTAGTAT+AGG - chr1_3:33523257-33523276 None:intergenic 15.0%
!! AATTAGATGTTAAGATTAAA+AGG + chr1_3:33523407-33523426 Msa0115020:intron 15.0%
!!! TCTTTGTTTATAATGTAAAA+TGG + chr1_3:33525274-33525293 Msa0115020:three_prime_UTR 15.0%
!! TGAAACGTTAGATTAATAAA+AGG + chr1_3:33518776-33518795 Msa0115020:intron 20.0%
!! AGATTAATAAAAGGAAACAT+CGG + chr1_3:33518785-33518804 Msa0115020:intron 20.0%
!! CAACTATAGTAACTAAAAAA+GGG - chr1_3:33518994-33519013 None:intergenic 20.0%
!! ACAACTATAGTAACTAAAAA+AGG - chr1_3:33518995-33519014 None:intergenic 20.0%
!!! TTGATTTAAAGCAAAATTAC+AGG - chr1_3:33519190-33519209 None:intergenic 20.0%
!! AATTATTACTAAACCTTACT+TGG + chr1_3:33519327-33519346 Msa0115020:intron 20.0%
!! GTAAGGTTTAGTAATAAAAA+AGG - chr1_3:33519512-33519531 None:intergenic 20.0%
!! AAGTTGAATGAAAATGTAAA+TGG - chr1_3:33519634-33519653 None:intergenic 20.0%
!! AACATAATATCAATCAAGAA+TGG + chr1_3:33519862-33519881 Msa0115020:intron 20.0%
!! GTAATCTAATTCATAAATGA+TGG - chr1_3:33519909-33519928 None:intergenic 20.0%
!!! TAATTATTTGTTGTTGGATT+TGG + chr1_3:33519966-33519985 Msa0115020:intron 20.0%
!!! TTTGGTTCCTATTAAAATTT+AGG + chr1_3:33520201-33520220 Msa0115020:intron 20.0%
!!! TACTTTTCTTTGTAAATCTA+TGG + chr1_3:33520585-33520604 Msa0115020:intron 20.0%
!! AATGACTGAAATAATTTAGA+GGG - chr1_3:33520718-33520737 None:intergenic 20.0%
!! TAATGACTGAAATAATTTAG+AGG - chr1_3:33520719-33520738 None:intergenic 20.0%
!! TTGTATTTAAATTAGTTAGG+GGG - chr1_3:33521465-33521484 None:intergenic 20.0%
!!! TTTTATTTTTTTTTGGCCTT+GGG - chr1_3:33521361-33521380 None:intergenic 20.0%
!!! TTTTTATTTTTTTTTGGCCT+TGG - chr1_3:33521362-33521381 None:intergenic 20.0%
!! TTGTATTTAAATTAGTTAGG+GGG + chr1_3:33521465-33521484 Msa0115020:intron 20.0%
!!! ATTATTTTATTAAGCCTGTA+CGG + chr1_3:33521861-33521880 Msa0115020:CDS 20.0%
!! TAGTAAAAGAACAAAAAAAG+AGG + chr1_3:33522044-33522063 Msa0115020:CDS 20.0%
!!! TATGTGCTATTTTTCATATT+TGG + chr1_3:33522543-33522562 Msa0115020:intron 20.0%
!! TCTAGCATTTAATAAAAGAA+AGG - chr1_3:33522580-33522599 None:intergenic 20.0%
!!! TCATGAAAATAGATTCTTTT+TGG - chr1_3:33522879-33522898 None:intergenic 20.0%
!! CAAAGTTGTTATGAAATAAA+AGG + chr1_3:33522982-33523001 Msa0115020:intron 20.0%
!!! TCTTTTTATTATTCCCATTT+TGG + chr1_3:33523042-33523061 Msa0115020:intron 20.0%
!!! TATATATGTATGTTTTCGAA+CGG + chr1_3:33523481-33523500 Msa0115020:intron 20.0%
!!! AATTTAGACTTTATTTGAAG+AGG + chr1_3:33523634-33523653 Msa0115020:CDS 20.0%
!! TGATTGACTATAATCAATAA+TGG - chr1_3:33524255-33524274 None:intergenic 20.0%
!!! TGGATTTTATTTTCAAAACT+TGG - chr1_3:33524557-33524576 None:intergenic 20.0%
!! GAAATAAGATAAACAGTTAA+CGG - chr1_3:33524869-33524888 None:intergenic 20.0%
!!! CTTATATGAAAATGTTTTTC+AGG + chr1_3:33524953-33524972 Msa0115020:intron 20.0%
!!! TAATTCATAAACTAGTTTGT+AGG + chr1_3:33525178-33525197 Msa0115020:three_prime_UTR 20.0%
!!! AATTCATAAACTAGTTTGTA+GGG + chr1_3:33525179-33525198 Msa0115020:three_prime_UTR 20.0%
!!! AGTTTGATTTTTAACTTGGA+AGG - chr1_3:33518300-33518319 None:intergenic 25.0%
!!! AGAGAGTTTGATTTTTAACT+TGG - chr1_3:33518304-33518323 None:intergenic 25.0%
! ACTAACTGAACGAAATTATT+TGG - chr1_3:33518537-33518556 None:intergenic 25.0%
!!! AAGTCGTTTTTTATTTTCCA+TGG + chr1_3:33518616-33518635 Msa0115020:intron 25.0%
! AGACAGTGAATTAACTTATA+AGG + chr1_3:33518733-33518752 Msa0115020:intron 25.0%
! TACATATAAAGAAACAAGTG+AGG + chr1_3:33518853-33518872 Msa0115020:intron 25.0%
! ACTAAAGACATAAAAGCAAA+TGG - chr1_3:33519589-33519608 None:intergenic 25.0%
! TTAAATGACACTAAGAGTAA+AGG - chr1_3:33519681-33519700 None:intergenic 25.0%
! AACATAGAACAAAAGAATGA+AGG - chr1_3:33519762-33519781 None:intergenic 25.0%
! TCTTGATTGATATTATGTTG+AGG - chr1_3:33519861-33519880 None:intergenic 25.0%
!! TTCTTTGCCTTTATACATTT+TGG + chr1_3:33520167-33520186 Msa0115020:intron 25.0%
!!! AAGGAAGCCTAAATTTTAAT+AGG - chr1_3:33520211-33520230 None:intergenic 25.0%
! ATTAAAATTTAGGCTTCCTT+AGG + chr1_3:33520211-33520230 Msa0115020:intron 25.0%
! ATAGGGTAACATATACTATT+TGG - chr1_3:33520333-33520352 None:intergenic 25.0%
! TCTACCAATACTTAACATAA+GGG - chr1_3:33520417-33520436 None:intergenic 25.0%
! ATGACTGAAATAATTTAGAG+GGG - chr1_3:33520717-33520736 None:intergenic 25.0%
! CCAAAGATTTAATACTTAAG+GGG - chr1_3:33521327-33521346 None:intergenic 25.0%
! GCCAAAGATTTAATACTTAA+GGG - chr1_3:33521328-33521347 None:intergenic 25.0%
! TGCCAAAGATTTAATACTTA+AGG - chr1_3:33521329-33521348 None:intergenic 25.0%
!! TATTAAATCTTTGGCAGTTT+TGG + chr1_3:33521333-33521352 Msa0115020:intron 25.0%
!!! TTTATTTTTTTTTGGCCTTG+GGG - chr1_3:33521360-33521379 None:intergenic 25.0%
! TAATGCTTAATACTGAAAAC+TGG + chr1_3:33521758-33521777 Msa0115020:intron 25.0%
! AATAAGGAACATGATAATTC+TGG + chr1_3:33521938-33521957 Msa0115020:CDS 25.0%
!! TTGTTATTCTTGTATTTCAG+AGG + chr1_3:33522315-33522334 Msa0115020:intron 25.0%
! TGTACATCAAATAATGAAGA+TGG - chr1_3:33522463-33522482 None:intergenic 25.0%
! AAGAAGAAGAAAAAGACTAA+AGG - chr1_3:33522506-33522525 None:intergenic 25.0%
! ATTCAACAATTGGAACAAAA+AGG - chr1_3:33522650-33522669 None:intergenic 25.0%
!! TTTTGGTGAATATCTTATCA+AGG - chr1_3:33522862-33522881 None:intergenic 25.0%
!! TTTTATTATTCCCATTTTGG+AGG + chr1_3:33523045-33523064 Msa0115020:intron 25.0%
!! TTTATTATTCCCATTTTGGA+GGG + chr1_3:33523046-33523065 Msa0115020:intron 25.0%
! TTTAGATGAGAATCTCTATT+GGG + chr1_3:33523162-33523181 Msa0115020:intron 25.0%
!! ACTTTCTGTAATGATTTTTC+AGG - chr1_3:33523204-33523223 None:intergenic 25.0%
! CTGTTATAAATATACGACAT+TGG + chr1_3:33523272-33523291 Msa0115020:intron 25.0%
! TAAATATACGACATTGGTAA+AGG + chr1_3:33523278-33523297 Msa0115020:intron 25.0%
! AAATATACGACATTGGTAAA+GGG + chr1_3:33523279-33523298 Msa0115020:intron 25.0%
! ATTAAAAGGACAAAGATATG+TGG + chr1_3:33523421-33523440 Msa0115020:intron 25.0%
!! ATATATGTATGTTTTCGAAC+GGG + chr1_3:33523482-33523501 Msa0115020:intron 25.0%
! TTAACATTACCATTGTGAAT+TGG + chr1_3:33523607-33523626 Msa0115020:intron 25.0%
!!! CTGCTGAATATTGTTATTTA+TGG - chr1_3:33524378-33524397 None:intergenic 25.0%
! CAAAACTCAACTTTAACATT+TGG + chr1_3:33524401-33524420 Msa0115020:CDS 25.0%
! TAAAATCATTTGCAGATGAT+TGG - chr1_3:33524577-33524596 None:intergenic 25.0%
!!! TAGTCAAATGAAAGTATTCA+TGG + chr1_3:33524595-33524614 Msa0115020:CDS 25.0%
!! TTTATCTTATTTCTCTGCAT+AGG + chr1_3:33524876-33524895 Msa0115020:intron 25.0%
! TCATATAAGATACTGTTTGA+CGG - chr1_3:33524942-33524961 None:intergenic 25.0%
!!! ATATGAAAATGTTTTTCAGG+TGG + chr1_3:33524956-33524975 Msa0115020:intron 25.0%
!! GTTTTTCTAAACAACTAAAG+TGG - chr1_3:33525025-33525044 None:intergenic 25.0%
! AGGTTAGTATATATGAATGT+TGG + chr1_3:33525114-33525133 Msa0115020:three_prime_UTR 25.0%
! ATTTCAACTGATTGAACTAA+TGG + chr1_3:33525219-33525238 Msa0115020:three_prime_UTR 25.0%
!! TGTTGATTCTCTTAGTGAAA+AGG + chr1_3:33518926-33518945 Msa0115020:intron 30.0%
! GTTGATTCTCTTAGTGAAAA+GGG + chr1_3:33518927-33518946 Msa0115020:intron 30.0%
AGTAACTAAAAAAGGGCAAA+GGG - chr1_3:33519049-33519068 None:intergenic 30.0%
TAGTAACTAAAAAAGGGCAA+AGG - chr1_3:33519050-33519069 None:intergenic 30.0%
CATATAATACACCAAATGGT+GGG + chr1_3:33519438-33519457 Msa0115020:intron 30.0%
! AAGAATGCATGTTTGAAGTA+AGG - chr1_3:33519529-33519548 None:intergenic 30.0%
AAGCAAATGGCATTTGAATT+GGG - chr1_3:33519576-33519595 None:intergenic 30.0%
AAAGCAAATGGCATTTGAAT+TGG - chr1_3:33519577-33519596 None:intergenic 30.0%
TGGAAAAGAAGATAATTGCA+AGG - chr1_3:33519614-33519633 None:intergenic 30.0%
GTGAAGTCTAACAAGTTATA+AGG - chr1_3:33519931-33519950 None:intergenic 30.0%
AAGTTAACCATACTTGACTT+AGG + chr1_3:33520041-33520060 Msa0115020:intron 30.0%
GAATAAGAGAGTTGAATAAC+AGG + chr1_3:33520260-33520279 Msa0115020:intron 30.0%
ATCACCCTTATGTTAAGTAT+TGG + chr1_3:33520410-33520429 Msa0115020:intron 30.0%
CTCTACCAATACTTAACATA+AGG - chr1_3:33520418-33520437 None:intergenic 30.0%
TCACAAAAGTTGTCACAAAT+TGG - chr1_3:33520491-33520510 None:intergenic 30.0%
GGCTAAATATAGAAATCTAG+AGG - chr1_3:33520654-33520673 None:intergenic 30.0%
TGGAAATATCAAGTTTGCAA+TGG + chr1_3:33520818-33520837 Msa0115020:intron 30.0%
AAATATCAAGTTTGCAATGG+AGG + chr1_3:33520821-33520840 Msa0115020:intron 30.0%
!! AGGTTGATTTTGAATATCTG+TGG + chr1_3:33520841-33520860 Msa0115020:intron 30.0%
! TTGATTTTGAATATCTGTGG+TGG + chr1_3:33520844-33520863 Msa0115020:intron 30.0%
GCAATTGACTAACATAGATA+TGG + chr1_3:33521136-33521155 Msa0115020:intron 30.0%
! TTTAGGCTTAATTGCACTTT+TGG + chr1_3:33521242-33521261 Msa0115020:intron 30.0%
CCCCTTAAGTATTAAATCTT+TGG + chr1_3:33521324-33521343 Msa0115020:intron 30.0%
!!! TTATTTTTTTTTGGCCTTGG+GGG - chr1_3:33521359-33521378 None:intergenic 30.0%
! TATTGAATCTTTGGCAGTTT+TGG - chr1_3:33521431-33521450 None:intergenic 30.0%
TGCCAAAGATTCAATACTTA+GGG + chr1_3:33521435-33521454 Msa0115020:intron 30.0%
! AAAAGGCTTAATTGCACTTT+TGG - chr1_3:33521522-33521541 None:intergenic 30.0%
TATAAACTCCTTGAACATGT+TGG + chr1_3:33521659-33521678 Msa0115020:CDS 30.0%
ATAAACTCCTTGAACATGTT+GGG + chr1_3:33521660-33521679 Msa0115020:CDS 30.0%
AGTTCTTACTAATAACAGGA+AGG - chr1_3:33521697-33521716 None:intergenic 30.0%
TTCCTGTTATTAGTAAGAAC+TGG + chr1_3:33521696-33521715 Msa0115020:intron 30.0%
TTAATTCAACGAACAAGAAC+AGG - chr1_3:33521725-33521744 None:intergenic 30.0%
TGGAAGAACTAAGGAATATA+TGG + chr1_3:33521885-33521904 Msa0115020:CDS 30.0%
AAGATAATGATCGCAATACA+CGG + chr1_3:33521969-33521988 Msa0115020:CDS 30.0%
AAAAGATGAAGATGTTGAGT+TGG + chr1_3:33522075-33522094 Msa0115020:CDS 30.0%
! ATCATTTCGAGTATTCTCTT+TGG - chr1_3:33522346-33522365 None:intergenic 30.0%
AAGCAAATGACTTCACAAAT+TGG - chr1_3:33522423-33522442 None:intergenic 30.0%
AATAATGAAGATGGTTCTCA+AGG - chr1_3:33522454-33522473 None:intergenic 30.0%
!! ATTTTTCATATTTGGCCTTC+AGG + chr1_3:33522551-33522570 Msa0115020:intron 30.0%
ATAAAAGAAAGGTAACCTGA+AGG - chr1_3:33522569-33522588 None:intergenic 30.0%
TTCCAATTGTTGAATGTTCT+GGG + chr1_3:33522655-33522674 Msa0115020:intron 30.0%
! TGATTTTTACCAGTCAAATC+AGG - chr1_3:33522708-33522727 None:intergenic 30.0%
AATCACATGAATCTGTTGTT+AGG + chr1_3:33522723-33522742 Msa0115020:intron 30.0%
AACAAGAGTAGATGTATCTA+TGG + chr1_3:33522925-33522944 Msa0115020:intron 30.0%
!! TTATTATTCCCATTTTGGAG+GGG + chr1_3:33523047-33523066 Msa0115020:intron 30.0%
AGGTTAAAACTAATGCTGTT+GGG + chr1_3:33523071-33523090 Msa0115020:intron 30.0%
!!! TTTCATGGTGGTGTTATTTT+GGG + chr1_3:33523095-33523114 Msa0115020:intron 30.0%
ATAGAGATTCTCATCTAAAC+TGG - chr1_3:33523161-33523180 None:intergenic 30.0%
GTTTAGATGAGAATCTCTAT+TGG + chr1_3:33523161-33523180 Msa0115020:intron 30.0%
AAATTTCTGCCAATTCACAA+TGG - chr1_3:33523619-33523638 None:intergenic 30.0%
TTATTTGAAGAGGTTAAGTG+TGG + chr1_3:33523644-33523663 Msa0115020:CDS 30.0%
AATTATTGACGATGTCGAAA+GGG - chr1_3:33523923-33523942 None:intergenic 30.0%
AAATTATTGACGATGTCGAA+AGG - chr1_3:33523924-33523943 None:intergenic 30.0%
!! TGACTCATCTACTTTTAAGA+TGG - chr1_3:33523955-33523974 None:intergenic 30.0%
ACTGAAAAAGAGGATATTTG+AGG - chr1_3:33524350-33524369 None:intergenic 30.0%
!!! CAAATATCCTCTTTTTCAGT+AGG + chr1_3:33524350-33524369 Msa0115020:CDS 30.0%
TCGCTGGATTTAATATCATA+TGG - chr1_3:33524476-33524495 None:intergenic 30.0%
GAAGTATGTCTTAGAAATCT+TGG + chr1_3:33524506-33524525 Msa0115020:CDS 30.0%
CTTAGAAATCTTGGATTTGT+TGG + chr1_3:33524515-33524534 Msa0115020:CDS 30.0%
!! AATCTTGGATTTGTTGGAAA+AGG + chr1_3:33524521-33524540 Msa0115020:CDS 30.0%
! ATTTTCAAAACTTGGTATGC+AGG - chr1_3:33524549-33524568 None:intergenic 30.0%
TTTGGATATCTGATATGACT+CGG - chr1_3:33524662-33524681 None:intergenic 30.0%
ATGGATAATTCTGTAGAACT+GGG - chr1_3:33524694-33524713 None:intergenic 30.0%
TTCAAGTGCATTCACTTAAT+AGG + chr1_3:33524724-33524743 Msa0115020:exon 30.0%
! TAATATAAAGCGTCCATTCA+CGG - chr1_3:33524816-33524835 None:intergenic 30.0%
AATGGACGCTTTATATTAGT+TGG + chr1_3:33524818-33524837 Msa0115020:intron 30.0%
ATGGACGCTTTATATTAGTT+GGG + chr1_3:33524819-33524838 Msa0115020:intron 30.0%
CATATAAGATACTGTTTGAC+GGG - chr1_3:33524941-33524960 None:intergenic 30.0%
!!! AAATGTTTTTCAGGTGGAAA+TGG + chr1_3:33524962-33524981 Msa0115020:intron 30.0%
! CCCTATAAATACCAATTTTC+CGG - chr1_3:33525252-33525271 None:intergenic 30.0%
CCGGAAAATTGGTATTTATA+GGG + chr1_3:33525249-33525268 Msa0115020:three_prime_UTR 30.0%
TCTGAGTTAAAGAGAGAAGA+GGG - chr1_3:33518263-33518282 None:intergenic 35.0%
ATCTGAGTTAAAGAGAGAAG+AGG - chr1_3:33518264-33518283 None:intergenic 35.0%
CTTCATCATCGTCATAGATA+AGG - chr1_3:33518710-33518729 None:intergenic 35.0%
TTACGTGCTAATAGGAAAGA+AGG + chr1_3:33518810-33518829 Msa0115020:intron 35.0%
!!! AGTGAGGTTTTAAATGAAGC+TGG + chr1_3:33518869-33518888 Msa0115020:intron 35.0%
!!! AGGTTTTAAATGAAGCTGGT+GGG + chr1_3:33518873-33518892 Msa0115020:intron 35.0%
!! TCACTTTTGGATTGATGTCT+TGG + chr1_3:33518968-33518987 Msa0115020:intron 35.0%
! CACTTTTGGATTGATGTCTT+GGG + chr1_3:33518969-33518988 Msa0115020:intron 35.0%
CTGTCATCATGTCACATATA+TGG - chr1_3:33519110-33519129 None:intergenic 35.0%
TATGTGACATGATGACAGAT+AGG + chr1_3:33519112-33519131 Msa0115020:intron 35.0%
TGATGACAGATAGGTAGAAA+TGG + chr1_3:33519121-33519140 Msa0115020:intron 35.0%
GAATGATGCAAATGAGAAAG+TGG - chr1_3:33519293-33519312 None:intergenic 35.0%
!! TTACACAAGAGGTTGTTTCT+AGG - chr1_3:33519402-33519421 None:intergenic 35.0%
ACAACCTCTTGTGTAAAAAC+AGG + chr1_3:33519406-33519425 Msa0115020:intron 35.0%
CAACCTCTTGTGTAAAAACA+GGG + chr1_3:33519407-33519426 Msa0115020:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr1_3:33519413-33519432 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr1_3:33519412-33519431 Msa0115020:intron 35.0%
GCTGCATATAATACACCAAA+TGG + chr1_3:33519434-33519453 Msa0115020:intron 35.0%
GCATATAATACACCAAATGG+TGG + chr1_3:33519437-33519456 Msa0115020:intron 35.0%
AAATGGCATTTGAATTGGGA+TGG - chr1_3:33519572-33519591 None:intergenic 35.0%
TTCTGTGCATGTTTACACAT+TGG + chr1_3:33519780-33519799 Msa0115020:intron 35.0%
CGAATTGAAAAAACGCAAAC+AGG - chr1_3:33519821-33519840 None:intergenic 35.0%
GTCTCATTAAACCGAAATCA+CGG + chr1_3:33519994-33520013 Msa0115020:intron 35.0%
TTAACCATACTTGACTTAGG+AGG + chr1_3:33520044-33520063 Msa0115020:intron 35.0%
AAAATTTAGGCTTCCTTAGG+TGG + chr1_3:33520214-33520233 Msa0115020:intron 35.0%
TAAGAGAGTTGAATAACAGG+AGG + chr1_3:33520263-33520282 Msa0115020:intron 35.0%
GGGTAACATATACTATTTGG+TGG - chr1_3:33520330-33520349 None:intergenic 35.0%
GTTACCCTATCTTATGTTAG+AGG + chr1_3:33520343-33520362 Msa0115020:intron 35.0%
TCTGCCTCTAACATAAGATA+GGG - chr1_3:33520350-33520369 None:intergenic 35.0%
ATCTGCCTCTAACATAAGAT+AGG - chr1_3:33520351-33520370 None:intergenic 35.0%
TTTCTGTCTCTCTATTGCTT+TGG + chr1_3:33520546-33520565 Msa0115020:intron 35.0%
CCATTTGCTTGACAACTTAT+GGG - chr1_3:33520615-33520634 None:intergenic 35.0%
!! CGGTTTTGTAAAGATGAGTT+GGG - chr1_3:33520675-33520694 None:intergenic 35.0%
CCAACTCATCTTTACAAAAC+CGG + chr1_3:33520673-33520692 Msa0115020:intron 35.0%
! ATTTTGAATATCTGTGGTGG+TGG + chr1_3:33520847-33520866 Msa0115020:intron 35.0%
GTCCTAAGTGGCAATTAAAA+TGG + chr1_3:33520873-33520892 Msa0115020:intron 35.0%
!!! CACCATTTTAATTGCCACTT+AGG - chr1_3:33520878-33520897 None:intergenic 35.0%
CTAAGTGGCAATTAAAATGG+TGG + chr1_3:33520876-33520895 Msa0115020:intron 35.0%
! GTGGTGATGACAATTATAGA+GGG + chr1_3:33520932-33520951 Msa0115020:intron 35.0%
!! TATTGAGCAATGATAGTGGA+AGG + chr1_3:33520955-33520974 Msa0115020:intron 35.0%
TCATTGGTAAGGGTGAAAAA+GGG + chr1_3:33521059-33521078 Msa0115020:intron 35.0%
CTGCCAAAGATTCAATACTT+AGG + chr1_3:33521434-33521453 Msa0115020:intron 35.0%
GCCAAAGATTCAATACTTAG+GGG + chr1_3:33521436-33521455 Msa0115020:intron 35.0%
CCAAAGATTCAATACTTAGG+GGG + chr1_3:33521437-33521456 Msa0115020:intron 35.0%
GTGACTGCAGGATAAATAAA+AGG - chr1_3:33521539-33521558 None:intergenic 35.0%
! CTTTGAAAATTCTGCGAGAA+AGG + chr1_3:33521582-33521601 Msa0115020:intron 35.0%
AAAATTCTGCGAGAAAGGAA+AGG + chr1_3:33521587-33521606 Msa0115020:intron 35.0%
GACCAGTTCTTACTAATAAC+AGG - chr1_3:33521701-33521720 None:intergenic 35.0%
AAAACTGGTTATGTTCTGCA+CGG + chr1_3:33521773-33521792 Msa0115020:intron 35.0%
! TTTTATTAAGCCTGTACGGA+TGG + chr1_3:33521865-33521884 Msa0115020:CDS 35.0%
AGATAATGATCGCAATACAC+GGG + chr1_3:33521970-33521989 Msa0115020:CDS 35.0%
! CATTTTCTCTTGTTAGACCA+GGG - chr1_3:33522375-33522394 None:intergenic 35.0%
! ACATTTTCTCTTGTTAGACC+AGG - chr1_3:33522376-33522395 None:intergenic 35.0%
AAATGTTGCAAGTCATTTGC+AGG + chr1_3:33522390-33522409 Msa0115020:CDS 35.0%
AACGTATGAAATTCCCATCA+AGG - chr1_3:33522620-33522639 None:intergenic 35.0%
GTTCCAATTGTTGAATGTTC+TGG + chr1_3:33522654-33522673 Msa0115020:intron 35.0%
TACCCAGAACATTCAACAAT+TGG - chr1_3:33522660-33522679 None:intergenic 35.0%
CTTTACAAGAGTTACTAAGG+TGG - chr1_3:33522788-33522807 None:intergenic 35.0%
GCTCTTTACAAGAGTTACTA+AGG - chr1_3:33522791-33522810 None:intergenic 35.0%
TCAAAACTATCAGTGCAACA+TGG + chr1_3:33522816-33522835 Msa0115020:intron 35.0%
! ATGTTTTGTATGTCACAGAG+AGG + chr1_3:33522948-33522967 Msa0115020:intron 35.0%
! TGTTTTGTATGTCACAGAGA+GGG + chr1_3:33522949-33522968 Msa0115020:intron 35.0%
!! TATTATTCCCATTTTGGAGG+GGG + chr1_3:33523048-33523067 Msa0115020:intron 35.0%
GAGGTTAAAACTAATGCTGT+TGG + chr1_3:33523070-33523089 Msa0115020:intron 35.0%
GGTTAAAACTAATGCTGTTG+GGG + chr1_3:33523072-33523091 Msa0115020:intron 35.0%
!!! GTTTCATGGTGGTGTTATTT+TGG + chr1_3:33523094-33523113 Msa0115020:intron 35.0%
AGACTAGTGATGTATGAGAA+AGG + chr1_3:33523316-33523335 Msa0115020:intron 35.0%
AGTGATGTATGAGAAAGGTT+AGG + chr1_3:33523321-33523340 Msa0115020:intron 35.0%
GACAAGTTCTTTCTATCACT+TGG - chr1_3:33523370-33523389 None:intergenic 35.0%
! TGTTTTGTAGTGCTTTACTG+TGG + chr1_3:33523584-33523603 Msa0115020:intron 35.0%
GGATGTTAAACACAGTTCAT+GGG + chr1_3:33523685-33523704 Msa0115020:CDS 35.0%
TACTGGAAGATATGACATAC+AGG + chr1_3:33523731-33523750 Msa0115020:CDS 35.0%
AAGATATGACATACAGGCTT+TGG + chr1_3:33523737-33523756 Msa0115020:CDS 35.0%
AACTAACATAATGCCTACAG+TGG + chr1_3:33523827-33523846 Msa0115020:CDS 35.0%
!!! CTACTTTTAAGATGGACTGA+GGG - chr1_3:33523947-33523966 None:intergenic 35.0%
!!! TCTACTTTTAAGATGGACTG+AGG - chr1_3:33523948-33523967 None:intergenic 35.0%
GATGAGTCATCATCAGTATA+TGG + chr1_3:33523966-33523985 Msa0115020:CDS 35.0%
ATATATTGCAGCACCAACAA+CGG + chr1_3:33524066-33524085 Msa0115020:CDS 35.0%
! AAGGTATTAGAAGATTGAGC+AGG - chr1_3:33524176-33524195 None:intergenic 35.0%
TCAATCTTCTAATACCTTCC+AGG + chr1_3:33524178-33524197 Msa0115020:CDS 35.0%
AGAGGATATTTGAGGAGAAA+TGG - chr1_3:33524342-33524361 None:intergenic 35.0%
TATGGATCCTACTGAAAAAG+AGG - chr1_3:33524360-33524379 None:intergenic 35.0%
! AAAGTATTCATGGCTAGCAA+TGG + chr1_3:33524605-33524624 Msa0115020:CDS 35.0%
GATGGATAATTCTGTAGAAC+TGG - chr1_3:33524695-33524714 None:intergenic 35.0%
GTTACTATTTGATCCGTGAA+TGG + chr1_3:33524800-33524819 Msa0115020:intron 35.0%
TGGACGCTTTATATTAGTTG+GGG + chr1_3:33524820-33524839 Msa0115020:intron 35.0%
! AATATGTACCTTTGGAGGTA+AGG - chr1_3:33524998-33525017 None:intergenic 35.0%
GAAACAATATGTACCTTTGG+AGG - chr1_3:33525003-33525022 None:intergenic 35.0%
GTGGAAACAATATGTACCTT+TGG - chr1_3:33525006-33525025 None:intergenic 35.0%
TCAGAGTTAGAGTCATCATT+GGG - chr1_3:33525091-33525110 None:intergenic 35.0%
ATCAGAGTTAGAGTCATCAT+TGG - chr1_3:33525092-33525111 None:intergenic 35.0%
GATGACTCTAACTCTGATAA+AGG + chr1_3:33525094-33525113 Msa0115020:three_prime_UTR 35.0%
GCCGGAAAATTGGTATTTAT+AGG + chr1_3:33525248-33525267 Msa0115020:three_prime_UTR 35.0%
! GAGAAGAGGGAGTACAAAAA+AGG - chr1_3:33518250-33518269 None:intergenic 40.0%
TCTCTTCGCTGTCATTATCA+AGG + chr1_3:33518494-33518513 Msa0115020:CDS 40.0%
!!! GAGGTTTTAAATGAAGCTGG+TGG + chr1_3:33518872-33518891 Msa0115020:intron 40.0%
TAGTGAAAAGGGCTATGTTG+AGG + chr1_3:33518938-33518957 Msa0115020:intron 40.0%
! TTGAGGTTGAAGCTCACTTT+TGG + chr1_3:33518955-33518974 Msa0115020:intron 40.0%
GTTGTTGACATGTGACTGTA+AGG + chr1_3:33519010-33519029 Msa0115020:intron 40.0%
GAGATCAAGTACACCATCAT+TGG + chr1_3:33519157-33519176 Msa0115020:intron 40.0%
TGCAAATGAGAAAGTGGCAA+TGG - chr1_3:33519287-33519306 None:intergenic 40.0%
TCATGTGACTGAAATGTCAC+AGG + chr1_3:33519369-33519388 Msa0115020:intron 40.0%
! TGACTTGTGTACCGTGATTT+CGG - chr1_3:33520008-33520027 None:intergenic 40.0%
CCCATAAGTTGTCAAGCAAA+TGG + chr1_3:33520612-33520631 Msa0115020:intron 40.0%
GCCATTTGCTTGACAACTTA+TGG - chr1_3:33520616-33520635 None:intergenic 40.0%
!! CCGGTTTTGTAAAGATGAGT+TGG - chr1_3:33520676-33520695 None:intergenic 40.0%
!! CTTTACAAAACCGGCTTGTA+AGG + chr1_3:33520682-33520701 Msa0115020:intron 40.0%
TTGTAGCTGTCAACAGCTAT+TGG - chr1_3:33520771-33520790 None:intergenic 40.0%
TTGACAGCTACAAACTGTGT+GGG + chr1_3:33520778-33520797 Msa0115020:intron 40.0%
AGTGGCAATTAAAATGGTGG+AGG + chr1_3:33520879-33520898 Msa0115020:intron 40.0%
! GTGGCAATTAAAATGGTGGA+GGG + chr1_3:33520880-33520899 Msa0115020:intron 40.0%
! GGTGGTGATGACAATTATAG+AGG + chr1_3:33520931-33520950 Msa0115020:intron 40.0%
!! AGGGTATTGAGCAATGATAG+TGG + chr1_3:33520951-33520970 Msa0115020:intron 40.0%
GTCATTGGTAAGGGTGAAAA+AGG + chr1_3:33521058-33521077 Msa0115020:intron 40.0%
!!! GCAAGTTTTGGAAAGATAGG+GGG - chr1_3:33521496-33521515 None:intergenic 40.0%
!!! CGCAAGTTTTGGAAAGATAG+GGG - chr1_3:33521495-33521514 None:intergenic 40.0%
!!! CCGCAAGTTTTGGAAAGATA+GGG - chr1_3:33521494-33521513 None:intergenic 40.0%
CCCTATCTTTCCAAAACTTG+CGG + chr1_3:33521267-33521286 Msa0115020:intron 40.0%
!!! ACCGCAAGTTTTGGAAAGAT+AGG - chr1_3:33521493-33521512 None:intergenic 40.0%
!! CCCCCTAAGTATTGAATCTT+TGG - chr1_3:33521440-33521459 None:intergenic 40.0%
!!! ACCGCAAGTTTTGGAAAGAT+AGG + chr1_3:33521493-33521512 Msa0115020:intron 40.0%
CCCTATCTTTCCAAAACTTG+CGG - chr1_3:33521267-33521286 None:intergenic 40.0%
!!! CCGCAAGTTTTGGAAAGATA+GGG + chr1_3:33521494-33521513 Msa0115020:intron 40.0%
!!! CGCAAGTTTTGGAAAGATAG+GGG + chr1_3:33521495-33521514 Msa0115020:intron 40.0%
!!! GCAAGTTTTGGAAAGATAGG+GGG + chr1_3:33521496-33521515 Msa0115020:intron 40.0%
TGATGTTCATATGCCAGACA+TGG + chr1_3:33521631-33521650 Msa0115020:intron 40.0%
AGTTTATAGCCATCCATGTC+TGG - chr1_3:33521647-33521666 None:intergenic 40.0%
TTTCCAACCCAACATGTTCA+AGG - chr1_3:33521670-33521689 None:intergenic 40.0%
!! TGAACATGTTGGGTTGGAAA+TGG + chr1_3:33521670-33521689 Msa0115020:CDS 40.0%
!! CAGTGATGTCTGTTGATGAT+AGG + chr1_3:33521798-33521817 Msa0115020:intron 40.0%
! TAGGACAAGTACTGTCATGA+AGG + chr1_3:33521817-33521836 Msa0115020:CDS 40.0%
! AGGACAAGTACTGTCATGAA+GGG + chr1_3:33521818-33521837 Msa0115020:CDS 40.0%
GTCATGAAGGGAATTAGACA+CGG + chr1_3:33521830-33521849 Msa0115020:CDS 40.0%
TCATGAAGGGAATTAGACAC+GGG + chr1_3:33521831-33521850 Msa0115020:CDS 40.0%
ATATATGGCAGCATGTTGCT+AGG + chr1_3:33521900-33521919 Msa0115020:CDS 40.0%
GATAATGATCGCAATACACG+GGG + chr1_3:33521971-33521990 Msa0115020:CDS 40.0%
ATAATGATCGCAATACACGG+GGG + chr1_3:33521972-33521991 Msa0115020:CDS 40.0%
GTCAGTGCTGTAAATCAACT+AGG + chr1_3:33522166-33522185 Msa0115020:CDS 40.0%
! TTCAATGACGGAGACTTCTT+TGG + chr1_3:33522245-33522264 Msa0115020:intron 40.0%
TTCGAGTATTCTCTTTGGCA+CGG - chr1_3:33522341-33522360 None:intergenic 40.0%
! ACGGTTTTCTACTACCTTGA+TGG + chr1_3:33522603-33522622 Msa0115020:intron 40.0%
! CGGTTTTCTACTACCTTGAT+GGG + chr1_3:33522604-33522623 Msa0115020:intron 40.0%
AAATGAACACTGCGTAGACT+TGG + chr1_3:33522681-33522700 Msa0115020:intron 40.0%
AATGAACACTGCGTAGACTT+GGG + chr1_3:33522682-33522701 Msa0115020:intron 40.0%
!!! TGCACTGATAGTTTTGACAC+AGG - chr1_3:33522813-33522832 None:intergenic 40.0%
AGAATCTCTATTGGGTCATG+CGG + chr1_3:33523170-33523189 Msa0115020:intron 40.0%
! TACATCACTAGTCTCATTCC+AGG - chr1_3:33523310-33523329 None:intergenic 40.0%
TTTGAAGAGGTTAAGTGTGG+TGG + chr1_3:33523647-33523666 Msa0115020:CDS 40.0%
GGGATGTTAAACACAGTTCA+TGG + chr1_3:33523684-33523703 Msa0115020:CDS 40.0%
TAGGCATTATGTTAGTTGCC+GGG - chr1_3:33523824-33523843 None:intergenic 40.0%
GTAGGCATTATGTTAGTTGC+CGG - chr1_3:33523825-33523844 None:intergenic 40.0%
ACTAATGCATGCATCTGTAC+AGG + chr1_3:33523860-33523879 Msa0115020:CDS 40.0%
CTAATGCATGCATCTGTACA+GGG + chr1_3:33523861-33523880 Msa0115020:CDS 40.0%
TAATGCATGCATCTGTACAG+GGG + chr1_3:33523862-33523881 Msa0115020:CDS 40.0%
CATCATCAGTATATGGAGCA+TGG + chr1_3:33523973-33523992 Msa0115020:CDS 40.0%
TCAATCTCAAGTGGAAGGTT+AGG + chr1_3:33524017-33524036 Msa0115020:CDS 40.0%
CAATGTTCAACCATCTTGCT+TGG + chr1_3:33524145-33524164 Msa0115020:CDS 40.0%
AACACTATTTACTGCCTGGA+AGG - chr1_3:33524195-33524214 None:intergenic 40.0%
AAGCAACACTATTTACTGCC+TGG - chr1_3:33524199-33524218 None:intergenic 40.0%
!! TAGTGTTGCTTCTGTCAACA+AGG + chr1_3:33524208-33524227 Msa0115020:CDS 40.0%
! GTCAACAAGGATAGCAGTTT+TGG + chr1_3:33524221-33524240 Msa0115020:CDS 40.0%
TCGAGTTCATGTCAATATCC+TGG + chr1_3:33524296-33524315 Msa0115020:CDS 40.0%
AGTTCATGTCAATATCCTGG+CGG + chr1_3:33524299-33524318 Msa0115020:CDS 40.0%
GGATATTTGAGGAGAAATGG+AGG - chr1_3:33524339-33524358 None:intergenic 40.0%
GAACTTGTCTAAGTGTCAAG+GGG - chr1_3:33524454-33524473 None:intergenic 40.0%
GGAACTTGTCTAAGTGTCAA+GGG - chr1_3:33524455-33524474 None:intergenic 40.0%
TGGAACTTGTCTAAGTGTCA+AGG - chr1_3:33524456-33524475 None:intergenic 40.0%
TACTTCATCAAGTGAATCGC+TGG - chr1_3:33524492-33524511 None:intergenic 40.0%
TAGCAATGGTAACACAGTGA+AGG + chr1_3:33524619-33524638 Msa0115020:CDS 40.0%
GATAATTCTGTAGAACTGGG+TGG - chr1_3:33524691-33524710 None:intergenic 40.0%
GCACTTGAATGATCATGAGA+TGG - chr1_3:33524713-33524732 None:intergenic 40.0%
! TAAGATACTGTTTGACGGGT+AGG - chr1_3:33524937-33524956 None:intergenic 40.0%
AGTTACATGTGCAGCTATTG+AGG - chr1_3:33525146-33525165 None:intergenic 40.0%
CAATAGCTGCACATGTAACT+TGG + chr1_3:33525146-33525165 Msa0115020:three_prime_UTR 40.0%
TTGAACTAATGGCTTCTTGC+CGG + chr1_3:33525230-33525249 Msa0115020:three_prime_UTR 40.0%
CATAGCTGCTTCTTACGTAG+GGG - chr1_3:33518372-33518391 None:intergenic 45.0%
GCATAGCTGCTTCTTACGTA+GGG - chr1_3:33518373-33518392 None:intergenic 45.0%
TCGCAGATTGTAAGAGTCCA+TGG - chr1_3:33518636-33518655 None:intergenic 45.0%
AGTCTACACAGAGTCGTGTA+GGG - chr1_3:33518673-33518692 None:intergenic 45.0%
AAGTCTACACAGAGTCGTGT+AGG - chr1_3:33518674-33518693 None:intergenic 45.0%
CATCGGCATTACGTGCTAAT+AGG + chr1_3:33518802-33518821 Msa0115020:intron 45.0%
! TTAAATGAAGCTGGTGGGTG+AGG + chr1_3:33518878-33518897 Msa0115020:intron 45.0%
GACATGTGACTGTAAGGTCA+CGG + chr1_3:33519016-33519035 Msa0115020:intron 45.0%
ACATGTGACTGTAAGGTCAC+GGG + chr1_3:33519017-33519036 Msa0115020:intron 45.0%
GTTGTTGACATGCACGTTGA+AGG + chr1_3:33519072-33519091 Msa0115020:intron 45.0%
TACAGGAAGTCGACCAATGA+TGG - chr1_3:33519173-33519192 None:intergenic 45.0%
GCAATGGAAAGCAGCAGTAA+AGG - chr1_3:33519271-33519290 None:intergenic 45.0%
CTAAACCTTACTTGGCGCAA+CGG + chr1_3:33519335-33519354 Msa0115020:intron 45.0%
ACCATACTTGACTTAGGAGG+AGG + chr1_3:33520047-33520066 Msa0115020:intron 45.0%
CCATACTTGACTTAGGAGGA+GGG + chr1_3:33520048-33520067 Msa0115020:intron 45.0%
GACTTAGGAGGAGGGTTAAA+AGG + chr1_3:33520056-33520075 Msa0115020:intron 45.0%
TTAGGAGGAGGGTTAAAAGG+AGG + chr1_3:33520059-33520078 Msa0115020:intron 45.0%
TAGGAGGAGGGTTAAAAGGA+GGG + chr1_3:33520060-33520079 Msa0115020:intron 45.0%
TGTCATATCGTGTCCACCTA+AGG - chr1_3:33520230-33520249 None:intergenic 45.0%
!! AAAACCGGCTTGTAAGGTGA+AGG + chr1_3:33520688-33520707 Msa0115020:intron 45.0%
GTTGACAGCTACAAACTGTG+TGG + chr1_3:33520777-33520796 Msa0115020:intron 45.0%
TGACAGCTACAAACTGTGTG+GGG + chr1_3:33520779-33520798 Msa0115020:intron 45.0%
GGGGTGGTAGAAGTAATGTT+TGG + chr1_3:33520798-33520817 Msa0115020:intron 45.0%
!! TTGAATATCTGTGGTGGTGG+AGG + chr1_3:33520850-33520869 Msa0115020:intron 45.0%
!! TGAATATCTGTGGTGGTGGA+GGG + chr1_3:33520851-33520870 Msa0115020:intron 45.0%
CAGCAGTTGCAAATGATGCT+AGG + chr1_3:33520910-33520929 Msa0115020:intron 45.0%
CAGTTGCAAATGATGCTAGG+TGG + chr1_3:33520913-33520932 Msa0115020:intron 45.0%
!! CAATGATAGTGGAAGGTGTC+AGG + chr1_3:33520962-33520981 Msa0115020:intron 45.0%
! AGGGTAAAGGAAGAAAGCGT+GGG + chr1_3:33521036-33521055 Msa0115020:intron 45.0%
AAAGCGTGGGTCATTGGTAA+GGG + chr1_3:33521049-33521068 Msa0115020:intron 45.0%
GTTCATATGCCAGACATGGA+TGG + chr1_3:33521635-33521654 Msa0115020:intron 45.0%
ACTCCTTGAACATGTTGGGT+TGG + chr1_3:33521664-33521683 Msa0115020:CDS 45.0%
CATGAAGGGAATTAGACACG+GGG + chr1_3:33521832-33521851 Msa0115020:CDS 45.0%
! CTTAGTTCTTCCATCCGTAC+AGG - chr1_3:33521878-33521897 None:intergenic 45.0%
CTGTACGGATGGAAGAACTA+AGG + chr1_3:33521876-33521895 Msa0115020:CDS 45.0%
GACAACACTTCTTCTGTTGC+TGG + chr1_3:33522007-33522026 Msa0115020:CDS 45.0%
TCTGTTGCTGGTGCAACAAA+AGG + chr1_3:33522019-33522038 Msa0115020:CDS 45.0%
CGAGGCTTCTTAGATGTAGA+TGG - chr1_3:33522112-33522131 None:intergenic 45.0%
CTCGAAATGATGAATGTCCC+TGG + chr1_3:33522355-33522374 Msa0115020:CDS 45.0%
AAGGTGGTAGCATGGATGAT+AGG - chr1_3:33522772-33522791 None:intergenic 45.0%
GAGTTACTAAGGTGGTAGCA+TGG - chr1_3:33522780-33522799 None:intergenic 45.0%
TTAACCTCCCCCTCCAAAAT+GGG - chr1_3:33523058-33523077 None:intergenic 45.0%
TTTAACCTCCCCCTCCAAAA+TGG - chr1_3:33523059-33523078 None:intergenic 45.0%
CTAATGCTGTTGGGGTTTCA+TGG + chr1_3:33523080-33523099 Msa0115020:intron 45.0%
!! CATTGGTAAAGGGAGTATCC+TGG + chr1_3:33523289-33523308 Msa0115020:intron 45.0%
! TATGACATACAGGCTTTGGC+TGG + chr1_3:33523741-33523760 Msa0115020:CDS 45.0%
AAGAGCTGCAAGTGTTTCAG+GGG - chr1_3:33523781-33523800 None:intergenic 45.0%
GAAGAGCTGCAAGTGTTTCA+GGG - chr1_3:33523782-33523801 None:intergenic 45.0%
TGAAGAGCTGCAAGTGTTTC+AGG - chr1_3:33523783-33523802 None:intergenic 45.0%
TGAAACACTTGCAGCTCTTC+AGG + chr1_3:33523782-33523801 Msa0115020:CDS 45.0%
ACATAATGCCTACAGTGGAC+CGG + chr1_3:33523832-33523851 Msa0115020:CDS 45.0%
ATGCATGCATTAGTGCAGTC+CGG - chr1_3:33523854-33523873 None:intergenic 45.0%
ATTGACCCGAGTGTACTAGA+CGG - chr1_3:33524002-33524021 None:intergenic 45.0%
CGTGCAGAATAGTAACACAC+TGG + chr1_3:33524040-33524059 Msa0115020:CDS 45.0%
!!! GCTGTTGTTTTTGCTGATGC+TGG - chr1_3:33524094-33524113 None:intergenic 45.0%
TGTTCAACCATCTTGCTTGG+TGG + chr1_3:33524148-33524167 Msa0115020:CDS 45.0%
CAATGGTAACACAGTGAAGG+AGG + chr1_3:33524622-33524641 Msa0115020:CDS 45.0%
!! ATATGACTCGGTTCCTCCTT+TGG - chr1_3:33524650-33524669 None:intergenic 45.0%
AGAGAAGACCTTACCTCCAA+AGG + chr1_3:33524987-33525006 Msa0115020:three_prime_UTR 45.0%
GCTGCACATGTAACTTGGAA+TGG + chr1_3:33525151-33525170 Msa0115020:three_prime_UTR 45.0%
ATGGCTTCTTGCCGGAAAAT+TGG + chr1_3:33525238-33525257 Msa0115020:three_prime_UTR 45.0%
!!! TTATTTCTAATTTAATTTAA+TGG + chr1_3:33521103-33521122 Msa0115020:intron 5.0%
GGCATAGCTGCTTCTTACGT+AGG - chr1_3:33518374-33518393 None:intergenic 50.0%
TGAGTTTCCGGCTGGGTTAA+GGG + chr1_3:33518421-33518440 Msa0115020:CDS 50.0%
ACAAGAACCCTTAACCCAGC+CGG - chr1_3:33518431-33518450 None:intergenic 50.0%
GGACTCTTACAATCTGCGAG+TGG + chr1_3:33518637-33518656 Msa0115020:intron 50.0%
TGACATGCACGTTGAAGGCA+AGG + chr1_3:33519077-33519096 Msa0115020:intron 50.0%
CTTTACCGTTGCGCCAAGTA+AGG - chr1_3:33519343-33519362 None:intergenic 50.0%
TACTTGGCGCAACGGTAAAG+TGG + chr1_3:33519343-33519362 Msa0115020:intron 50.0%
CCCTCCTCCTAAGTCAAGTA+TGG - chr1_3:33520051-33520070 None:intergenic 50.0%
TGGTAGAGCGTGATCAGTTG+TGG + chr1_3:33520430-33520449 Msa0115020:intron 50.0%
TAGAGCGTGATCAGTTGTGG+AGG + chr1_3:33520433-33520452 Msa0115020:intron 50.0%
GCATCCTTCACCTTACAAGC+CGG - chr1_3:33520695-33520714 None:intergenic 50.0%
!! TGATAGTGGAAGGTGTCAGG+CGG + chr1_3:33520965-33520984 Msa0115020:intron 50.0%
AGGTGATCTGAGAGGGTGAT+AGG + chr1_3:33520988-33521007 Msa0115020:intron 50.0%
TGATCTGAGAGGGTGATAGG+TGG + chr1_3:33520991-33521010 Msa0115020:intron 50.0%
ATAGGTGGCATATGTCGTCG+TGG + chr1_3:33521006-33521025 Msa0115020:intron 50.0%
TAGGTGGCATATGTCGTCGT+GGG + chr1_3:33521007-33521026 Msa0115020:intron 50.0%
GAGGGTAAAGGAAGAAAGCG+TGG + chr1_3:33521035-33521054 Msa0115020:intron 50.0%
! AGGAAGAAAGCGTGGGTCAT+TGG + chr1_3:33521043-33521062 Msa0115020:intron 50.0%
! GAAAGCGTGGGTCATTGGTA+AGG + chr1_3:33521048-33521067 Msa0115020:intron 50.0%
TGGTAGACCTAGTTCGTGTG+TGG + chr1_3:33521156-33521175 Msa0115020:intron 50.0%
AGACCTAGTTCGTGTGTGGA+TGG + chr1_3:33521160-33521179 Msa0115020:intron 50.0%
GACCTAGTTCGTGTGTGGAT+GGG + chr1_3:33521161-33521180 Msa0115020:intron 50.0%
AACCCATCCACACACGAACT+AGG - chr1_3:33521166-33521185 None:intergenic 50.0%
TGACACGTGCCACCTCATTT+AGG + chr1_3:33521384-33521403 Msa0115020:intron 50.0%
GACACGTGCCACCTCATTTA+GGG + chr1_3:33521385-33521404 Msa0115020:intron 50.0%
ACGTGACACCCTAAATGAGG+TGG - chr1_3:33521396-33521415 None:intergenic 50.0%
CTGACGTGACACCCTAAATG+AGG - chr1_3:33521399-33521418 None:intergenic 50.0%
TCAGAGCATGTAGTGACTGC+AGG - chr1_3:33521551-33521570 None:intergenic 50.0%
TGCAGTCACTACATGCTCTG+AGG + chr1_3:33521550-33521569 Msa0115020:intron 50.0%
CTAAGAAGCCTCGTGTAGTG+TGG + chr1_3:33522119-33522138 Msa0115020:CDS 50.0%
TCTACTGACCACACTACACG+AGG - chr1_3:33522130-33522149 None:intergenic 50.0%
! AGACTTGGGCCTGATTTGAC+TGG + chr1_3:33522696-33522715 Msa0115020:intron 50.0%
!! TATTCCCATTTTGGAGGGGG+AGG + chr1_3:33523051-33523070 Msa0115020:intron 50.0%
ATGCTGTTGGGGTTTCATGG+TGG + chr1_3:33523083-33523102 Msa0115020:intron 50.0%
TCTCTATTGGGTCATGCGGA+AGG + chr1_3:33523174-33523193 Msa0115020:intron 50.0%
! TGGTGGCGCATCAACAGAAT+GGG + chr1_3:33523664-33523683 Msa0115020:CDS 50.0%
!! GAATCCAAGCTTGCTGCTAC+TGG + chr1_3:33523714-33523733 Msa0115020:CDS 50.0%
TCTTCCAGTAGCAGCAAGCT+TGG - chr1_3:33523721-33523740 None:intergenic 50.0%
! ATACAGGCTTTGGCTGGTTC+TGG + chr1_3:33523747-33523766 Msa0115020:CDS 50.0%
CAAGTGTTTCAGGGGAAACG+TGG - chr1_3:33523773-33523792 None:intergenic 50.0%
AACACTTGCAGCTCTTCAGG+CGG + chr1_3:33523785-33523804 Msa0115020:CDS 50.0%
ACACTCGGGTCAATCTCAAG+TGG + chr1_3:33524008-33524027 Msa0115020:CDS 50.0%
TCGGGTCAATCTCAAGTGGA+AGG + chr1_3:33524012-33524031 Msa0115020:CDS 50.0%
GTCTAAGTGTCAAGGGGAGA+AGG - chr1_3:33524448-33524467 None:intergenic 50.0%
! GATACTGTTTGACGGGTAGG+TGG - chr1_3:33524934-33524953 None:intergenic 50.0%
TCGTTGCAGAGAACGAGCTC+CGG + chr1_3:33518398-33518417 Msa0115020:CDS 55.0%
AACGAGCTCCGGTGAGTTTC+CGG + chr1_3:33518409-33518428 Msa0115020:CDS 55.0%
TAACCCAGCCGGAAACTCAC+CGG - chr1_3:33518420-33518439 None:intergenic 55.0%
GTGAGTTTCCGGCTGGGTTA+AGG + chr1_3:33518420-33518439 Msa0115020:CDS 55.0%
ACAAAGCTCCCGCATACGCA+GGG - chr1_3:33519477-33519496 None:intergenic 55.0%
! ATGCGGGAGCTTTGTGCACA+TGG + chr1_3:33519482-33519501 Msa0115020:intron 55.0%
CAGCTACAAACTGTGTGGGG+TGG + chr1_3:33520782-33520801 Msa0115020:intron 55.0%
AGGTGGCATATGTCGTCGTG+GGG + chr1_3:33521008-33521027 Msa0115020:intron 55.0%
! GGGGCTGTAACCGCAAGTTT+TGG - chr1_3:33521484-33521503 None:intergenic 55.0%
!! TTTGGCAGTTTTGGCCCCCA+AGG + chr1_3:33521342-33521361 Msa0115020:intron 55.0%
! TTAGGGTGTCACGTCAGCGT+TGG + chr1_3:33521402-33521421 Msa0115020:intron 55.0%
! TAGGGTGTCACGTCAGCGTT+GGG + chr1_3:33521403-33521422 Msa0115020:intron 55.0%
! GGGGCTGTAACCGCAAGTTT+TGG + chr1_3:33521484-33521503 Msa0115020:intron 55.0%
! GTGGTGGCGCATCAACAGAA+TGG + chr1_3:33523663-33523682 Msa0115020:CDS 55.0%
GACGATGTCGAAAGGGCTGT+AGG - chr1_3:33523916-33523935 None:intergenic 55.0%
GCAGGAACCACCAAGCAAGA+TGG - chr1_3:33524158-33524177 None:intergenic 55.0%
AAGGGGAGAAGGCTAGGCAA+TGG - chr1_3:33524437-33524456 None:intergenic 55.0%
AGTGTCAAGGGGAGAAGGCT+AGG - chr1_3:33524443-33524462 None:intergenic 55.0%
CACAGTGAAGGAGGAGCCAA+AGG + chr1_3:33524631-33524650 Msa0115020:CDS 55.0%
AGTGAAGGAGGAGCCAAAGG+AGG + chr1_3:33524634-33524653 Msa0115020:CDS 55.0%
AGAACTGGGTGGCTCGCATT+TGG - chr1_3:33524680-33524699 None:intergenic 55.0%
CTCGTTCTCTGCAACGACGC+AGG - chr1_3:33518395-33518414 None:intergenic 60.0%
TGGGAAGGGGTCCCACCATT+TGG - chr1_3:33519452-33519471 None:intergenic 60.0%
CATACGCAGGGTCTGGGAAG+GGG - chr1_3:33519465-33519484 None:intergenic 60.0%
GCATACGCAGGGTCTGGGAA+GGG - chr1_3:33519466-33519485 None:intergenic 60.0%
CTTCCCAGACCCTGCGTATG+CGG + chr1_3:33519465-33519484 Msa0115020:intron 60.0%
TTCCCAGACCCTGCGTATGC+GGG + chr1_3:33519466-33519485 Msa0115020:intron 60.0%
CACAAAGCTCCCGCATACGC+AGG - chr1_3:33519478-33519497 None:intergenic 60.0%
!! TGGTGGTGGAGGGTCCTAAG+TGG + chr1_3:33520861-33520880 Msa0115020:intron 60.0%
!! TAGTGGAAGGTGTCAGGCGG+AGG + chr1_3:33520968-33520987 Msa0115020:intron 60.0%
TCAGGCGGAGGTGATCTGAG+AGG + chr1_3:33520980-33520999 Msa0115020:intron 60.0%
CAGGCGGAGGTGATCTGAGA+GGG + chr1_3:33520981-33521000 Msa0115020:intron 60.0%
GGTGGCATATGTCGTCGTGG+GGG + chr1_3:33521009-33521028 Msa0115020:intron 60.0%
GCATATGTCGTCGTGGGGGA+GGG + chr1_3:33521013-33521032 Msa0115020:intron 60.0%
! AGGGTGTCACGTCAGCGTTG+GGG + chr1_3:33521404-33521423 Msa0115020:intron 60.0%
GCTCTTCAGGCGGAGCTCTT+AGG + chr1_3:33523795-33523814 Msa0115020:CDS 60.0%
AGTGCAGTCCGGTCCACTGT+AGG - chr1_3:33523843-33523862 None:intergenic 60.0%
TGGCCGCCGTCTAGTACACT+CGG + chr1_3:33523993-33524012 Msa0115020:CDS 60.0%
GACCCGAGTGTACTAGACGG+CGG - chr1_3:33523999-33524018 None:intergenic 60.0%
!! GCTGATGCTGGTGCCGTTGT+TGG - chr1_3:33524082-33524101 None:intergenic 60.0%
GTAGCTCTTGTGTCTCCGCC+AGG - chr1_3:33524317-33524336 None:intergenic 60.0%
AGCTCCGGTGAGTTTCCGGC+TGG + chr1_3:33518413-33518432 Msa0115020:CDS 65.0%
GCTCCGGTGAGTTTCCGGCT+GGG + chr1_3:33518414-33518433 Msa0115020:CDS 65.0%
CGCATACGCAGGGTCTGGGA+AGG - chr1_3:33519467-33519486 None:intergenic 65.0%
CTCCCGCATACGCAGGGTCT+GGG - chr1_3:33519471-33519490 None:intergenic 65.0%
GGCATATGTCGTCGTGGGGG+AGG + chr1_3:33521012-33521031 Msa0115020:intron 65.0%
TATGTCGTCGTGGGGGAGGG+AGG + chr1_3:33521016-33521035 Msa0115020:intron 65.0%
ATGTCGTCGTGGGGGAGGGA+GGG + chr1_3:33521017-33521036 Msa0115020:intron 65.0%
TCGTGGGGGAGGGAGGGTAA+AGG + chr1_3:33521023-33521042 Msa0115020:intron 65.0%
! GGGTGTCACGTCAGCGTTGG+GGG + chr1_3:33521405-33521424 Msa0115020:intron 65.0%
GGCGGAGCTCTTAGGTCACC+CGG + chr1_3:33523803-33523822 Msa0115020:CDS 65.0%
GGCCGCCGTCTAGTACACTC+GGG + chr1_3:33523994-33524013 Msa0115020:CDS 65.0%
GCTCCCGCATACGCAGGGTC+TGG - chr1_3:33519472-33519491 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 33518239 33525357 33518239 ID=Msa0115020;Name=Msa0115020
chr1_3 mRNA 33518239 33525357 33518239 ID=Msa0115020-mRNA-1;Parent=Msa0115020;Name=Msa0115020-mRNA-1;_AED=0.15;_eAED=0.15;_QI=150|0.8|0.83|1|0.8|0.66|6|386|589
chr1_3 exon 33518239 33518515 33518239 ID=Msa0115020-mRNA-1:exon:10501;Parent=Msa0115020-mRNA-1
chr1_3 exon 33521648 33521707 33521648 ID=Msa0115020-mRNA-1:exon:10502;Parent=Msa0115020-mRNA-1
chr1_3 exon 33521801 33522196 33521801 ID=Msa0115020-mRNA-1:exon:10503;Parent=Msa0115020-mRNA-1
chr1_3 exon 33522335 33522411 33522335 ID=Msa0115020-mRNA-1:exon:10504;Parent=Msa0115020-mRNA-1
chr1_3 exon 33523633 33524745 33523633 ID=Msa0115020-mRNA-1:exon:10505;Parent=Msa0115020-mRNA-1
chr1_3 exon 33524975 33525357 33524975 ID=Msa0115020-mRNA-1:exon:10506;Parent=Msa0115020-mRNA-1
chr1_3 five_prime_UTR 33518239 33518388 33518239 ID=Msa0115020-mRNA-1:five_prime_utr;Parent=Msa0115020-mRNA-1
chr1_3 CDS 33518389 33518515 33518389 ID=Msa0115020-mRNA-1:cds;Parent=Msa0115020-mRNA-1
chr1_3 CDS 33521648 33521707 33521648 ID=Msa0115020-mRNA-1:cds;Parent=Msa0115020-mRNA-1
chr1_3 CDS 33521801 33522196 33521801 ID=Msa0115020-mRNA-1:cds;Parent=Msa0115020-mRNA-1
chr1_3 CDS 33522335 33522411 33522335 ID=Msa0115020-mRNA-1:cds;Parent=Msa0115020-mRNA-1
chr1_3 CDS 33523633 33524742 33523633 ID=Msa0115020-mRNA-1:cds;Parent=Msa0115020-mRNA-1
chr1_3 three_prime_UTR 33524743 33524745 33524743 ID=Msa0115020-mRNA-1:three_prime_utr;Parent=Msa0115020-mRNA-1
chr1_3 three_prime_UTR 33524975 33525357 33524975 ID=Msa0115020-mRNA-1:three_prime_utr;Parent=Msa0115020-mRNA-1
Gene Sequence

>Msa0115020

ATGCCTGCGTCGTTGCAGAGAACGAGCTCCGGTGAGTTTCCGGCTGGGTTAAGGGTTCTTGTTGTTGATGATGACGTCACTACGTTGAAGATAATTGAACAAATGTCTCTTCGCTGTCATTATCAAGACATGGATGGCTATAAACTCCTTGAACATGTTGGGTTGGAAATGGACCTTCCTGTTATTATGATGTCTGTTGATGATAGGACAAGTACTGTCATGAAGGGAATTAGACACGGGGCTTGTGATTATTTTATTAAGCCTGTACGGATGGAAGAACTAAGGAATATATGGCAGCATGTTGCTAGGAAAATTTTGAATGAAAATAAGGAACATGATAATTCTGGCAGCATAGAAGATAATGATCGCAATACACGGGGGAATGATGATAATGACAACACTTCTTCTGTTGCTGGTGCAACAAAAGGAATAGTAAAAGAACAAAAAAAGAGGAGCAATTTAAAAGATGAAGATGTTGAGTTGGAGAATGACGATCCATCTACATCTAAGAAGCCTCGTGTAGTGTGGTCAGTAGAACTGCATCAACAATTTGTCAGTGCTGTAAATCAACTAGGACTTGACAAGGCCGTGCCAAAGAGAATACTCGAAATGATGAATGTCCCTGGTCTAACAAGAGAAAATGTTGCAAGTCATTTGCAGAAATTTAGACTTTATTTGAAGAGGTTAAGTGTGGTGGCGCATCAACAGAATGGGATGTTAAACACAGTTCATGGGACTATAGAATCCAAGCTTGCTGCTACTGGAAGATATGACATACAGGCTTTGGCTGGTTCTGGCCACGTTTCCCCTGAAACACTTGCAGCTCTTCAGGCGGAGCTCTTAGGTCACCCGGCAACTAACATAATGCCTACAGTGGACCGGACTGCACTAATGCATGCATCTGTACAGGGGACAAAACATTCTCGTGCTGATGATCATGCCTACAGCCCTTTCGACATCGTCAATAATTTCCCTCAGTCCATCTTAAAAGTAGATGAGTCATCATCAGTATATGGAGCATGGCCGCCGTCTAGTACACTCGGGTCAATCTCAAGTGGAAGGTTAGGCGTGCAGAATAGTAACACACTGGTTGATATATTGCAGCACCAACAACGGCACCAGCATCAGCAAAAACAACAGCAGTCTCAGATGCATGATCAAAATCGATCAATCAATGTTCAACCATCTTGCTTGGTGGTTCCTGCTCAATCTTCTAATACCTTCCAGGCAGTAAATAGTGTTGCTTCTGTCAACAAGGATAGCAGTTTTGGCAGAAATGCCATTATTGATTATAGTCAATCATCACAAAAATCAAATACTTCATCGAGTTCATGTCAATATCCTGGCGGAGACACAAGAGCTACCTCCATTTCTCCTCAAATATCCTCTTTTTCAGTAGGATCCATAAATAACAATATTCAGCAGATTCAAAACTCAACTTTAACATTTGGTGCTGCTAGACCATTGCCTAGCCTTCTCCCCTTGACACTTAGACAAGTTCCATATGATATTAAATCCAGCGATTCACTTGATGAAGTATGTCTTAGAAATCTTGGATTTGTTGGAAAAGGTACCTGCATACCAAGTTTTGAAAATAAAATCCAATCATCTGCAAATGATTTTAGTCAAATGAAAGTATTCATGGCTAGCAATGGTAACACAGTGAAGGAGGAGCCAAAGGAGGAACCGAGTCATATCAGATATCCAAATGCGAGCCACCCAGTTCTACAGAATTATCCATCTCATGATCATTCAAGTGCATTCACTTAA
Protein sequence

>Msa0115020

MPASLQRTSSGEFPAGLRVLVVDDDVTTLKIIEQMSLRCHYQDMDGYKLLEHVGLEMDLPVIMMSVDDRTSTVMKGIRHGACDYFIKPVRMEELRNIWQHVARKILNENKEHDNSGSIEDNDRNTRGNDDNDNTSSVAGATKGIVKEQKKRSNLKDEDVELENDDPSTSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILEMMNVPGLTRENVASHLQKFRLYLKRLSVVAHQQNGMLNTVHGTIESKLAATGRYDIQALAGSGHVSPETLAALQAELLGHPATNIMPTVDRTALMHASVQGTKHSRADDHAYSPFDIVNNFPQSILKVDESSSVYGAWPPSSTLGSISSGRLGVQNSNTLVDILQHQQRHQHQQKQQQSQMHDQNRSINVQPSCLVVPAQSSNTFQAVNSVASVNKDSSFGRNAIIDYSQSSQKSNTSSSSCQYPGGDTRATSISPQISSFSVGSINNNIQQIQNSTLTFGAARPLPSLLPLTLRQVPYDIKSSDSLDEVCLRNLGFVGKGTCIPSFENKIQSSANDFSQMKVFMASNGNTVKEEPKEEPSHIRYPNASHPVLQNYPSHDHSSAFT*