AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0012470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012470 MtrunA17_Chr1g0161431 94.427 628 25 2 1 620 1 626 0.0 1133
Msa0012470 MtrunA17_Chr4g0067981 57.099 324 129 5 10 329 28 345 2.51e-114 356
Msa0012470 MtrunA17_Chr2g0294911 58.228 316 123 3 2 315 18 326 5.42e-113 350
Msa0012470 MtrunA17_Chr8g0376881 57.778 270 107 3 13 281 25 288 1.59e-97 308
Msa0012470 MtrunA17_Chr3g0123131 56.679 277 113 2 7 281 7 278 4.18e-97 308
Msa0012470 MtrunA17_Chr3g0137101 54.362 298 114 5 9 299 4 286 5.86e-94 302
Msa0012470 MtrunA17_Chr1g0149841 53.462 260 116 2 12 270 4 259 5.89e-85 274
Msa0012470 MtrunA17_Chr4g0074411 48.288 292 140 5 13 304 18 298 4.59e-80 265
Msa0012470 MtrunA17_Chr2g0304841 49.338 302 139 5 13 304 18 315 1.29e-79 265
Msa0012470 MtrunA17_Chr4g0074401 47.727 308 143 7 2 304 6 300 4.22e-78 259
Msa0012470 MtrunA17_Chr7g0275891 46.844 301 119 8 12 288 4 287 8.10e-75 243
Msa0012470 MtrunA17_Chr1g0149851 47.122 278 109 3 12 264 4 268 4.89e-72 241
Msa0012470 MtrunA17_Chr7g0275401 43.434 297 138 3 12 294 4 284 9.15e-71 230
Msa0012470 MtrunA17_Chr4g0009851 45.490 255 108 4 4 258 2 225 5.48e-68 224
Msa0012470 MtrunA17_Chr4g0009901 47.773 247 98 4 13 259 10 225 8.27e-68 222
Msa0012470 MtrunA17_Chr4g0074421 56.410 195 75 5 63 256 2 187 4.62e-61 201
Msa0012470 MtrunA17_Chr6g0471041 43.145 248 108 5 12 258 13 228 4.66e-57 198
Msa0012470 MtrunA17_Chr1g0149831 50.500 200 91 3 72 270 1 193 2.86e-56 190
Msa0012470 MtrunA17_Chr4g0009981 44.279 201 82 1 58 258 2 172 5.29e-52 179
Msa0012470 MtrunA17_Chr3g0134461 45.082 244 78 3 9 251 4 192 9.26e-52 176
Msa0012470 MtrunA17_Chr3g0134481 58.156 141 54 1 10 150 5 140 3.96e-44 155
Msa0012470 MtrunA17_Chr3g0134481 61.111 54 21 0 200 253 130 183 2.32e-16 77.8
Msa0012470 MtrunA17_Chr8g0383961 48.026 152 77 2 11 162 12 161 1.67e-41 151
Msa0012470 MtrunA17_Chr8g0391911 35.827 254 128 5 13 251 9 242 4.72e-41 149
Msa0012470 MtrunA17_Chr4g0011071 37.059 170 77 1 59 228 35 174 1.71e-32 123
Msa0012470 MtrunA17_Chr6g0456631 33.333 165 107 2 12 174 8 171 1.08e-27 109
Msa0012470 MtrunA17_Chr6g0473731 35.751 193 94 5 93 284 10 173 1.14e-25 110
Msa0012470 MtrunA17_Chr8g0350761 29.921 254 163 4 15 254 19 271 2.09e-25 110
Msa0012470 MtrunA17_Chr4g0009991 42.177 147 54 3 105 251 1 116 3.02e-25 101
Msa0012470 MtrunA17_Chr3g0127941 43.089 123 65 2 17 135 56 177 6.42e-25 109
Msa0012470 MtrunA17_Chr5g0423031 53.086 81 37 1 13 93 10 89 4.95e-23 96.7
Msa0012470 MtrunA17_Chr7g0276361 36.585 164 86 4 14 162 11 171 2.18e-22 101
Msa0012470 MtrunA17_Chr4g0010001 51.852 81 38 1 13 93 10 89 3.01e-22 91.3
Msa0012470 MtrunA17_Chr4g0031961 58.442 77 28 1 188 260 113 189 1.65e-21 95.9
Msa0012470 MtrunA17_Chr8g0345901 41.322 121 66 2 19 135 38 157 3.82e-21 97.8
Msa0012470 MtrunA17_Chr4g0030271 34.161 161 91 3 17 163 89 248 5.39e-21 97.8
Msa0012470 MtrunA17_Chr3g0091641 31.220 205 125 5 17 205 24 228 5.58e-21 97.1
Msa0012470 MtrunA17_Chr1g0181811 33.537 164 94 3 17 166 85 247 8.14e-21 97.1
Msa0012470 MtrunA17_Chr7g0255711 64.516 62 22 0 199 260 88 149 1.90e-20 92.4
Msa0012470 MtrunA17_Chr4g0061021 29.032 186 118 3 17 195 33 211 1.84e-19 92.4
Msa0012470 MtrunA17_Chr4g0040481 37.778 135 72 2 138 260 82 216 2.92e-17 84.7
Msa0012470 MtrunA17_Chr5g0400241 60.000 60 24 0 201 260 310 369 4.25e-17 84.7
Msa0012470 MtrunA17_Chr5g0400241 36.434 129 76 3 12 138 13 137 4.02e-15 78.6
Msa0012470 MtrunA17_Chr4g0054981 60.000 60 24 0 201 260 309 368 1.69e-16 82.8
Msa0012470 MtrunA17_Chr4g0054981 34.375 128 80 2 12 138 13 137 3.96e-14 75.5
Msa0012470 MtrunA17_Chr2g0324891 56.061 66 29 0 195 260 154 219 6.12e-16 80.5
Msa0012470 MtrunA17_Chr5g0417521 57.627 59 24 1 198 255 11 69 5.12e-15 77.0
Msa0012470 MtrunA17_Chr6g0469321 64.151 53 19 0 218 270 70 122 1.07e-14 72.8
Msa0012470 MtrunA17_Chr6g0461641 46.753 77 32 2 198 273 38 106 3.64e-14 74.7
Msa0012470 MtrunA17_Chr4g0042451 54.237 59 26 1 198 255 13 71 9.12e-14 73.2
Msa0012470 MtrunA17_Chr2g0321461 54.237 59 26 1 198 255 41 99 1.08e-13 73.2
Msa0012470 MtrunA17_Chr2g0310011 59.322 59 23 1 198 255 31 89 1.20e-13 72.8
Msa0012470 MtrunA17_Chr8g0356501 59.322 59 23 1 198 255 33 91 1.58e-13 72.4
Msa0012470 MtrunA17_Chr1g0198601 51.471 68 32 1 195 261 204 271 1.64e-13 72.8
Msa0012470 MtrunA17_Chr7g0256551 29.054 148 83 3 17 142 9 156 1.08e-12 68.2
Msa0012470 MtrunA17_Chr7g0274471 62.963 54 19 1 202 254 218 271 1.32e-12 70.1
Msa0012470 MtrunA17_Chr5g0402631 48.649 74 37 1 199 271 211 284 1.35e-12 69.7
Msa0012470 MtrunA17_Chr5g0422621 47.826 69 35 1 201 268 197 265 2.56e-12 68.9
Msa0012470 MtrunA17_Chr4g0062921 48.052 77 37 2 194 269 227 301 3.53e-12 68.9
Msa0012470 MtrunA17_Chr7g0261911 52.381 63 29 1 198 259 258 320 4.68e-12 68.6
Msa0012470 MtrunA17_Chr4g0045361 52.381 63 29 1 199 260 271 333 4.87e-12 68.2
Msa0012470 MtrunA17_Chr1g0197171 58.182 55 22 1 202 255 44 98 5.43e-12 67.0
Msa0012470 MtrunA17_Chr1g0190301 52.941 68 25 2 194 254 161 228 7.87e-12 67.4
Msa0012470 MtrunA17_Chr7g0254981 54.545 55 24 1 202 255 50 104 2.01e-11 65.1
Msa0012470 MtrunA17_Chr2g0290991 48.649 74 33 2 183 255 24 93 3.71e-11 64.7
Msa0012470 MtrunA17_Chr1g0175081 47.458 59 30 1 198 255 18 76 6.55e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012470 AT3G16857.1 54.037 322 130 3 13 316 33 354 5.61e-107 337
Msa0012470 AT3G16857.2 54.037 322 130 3 13 316 33 354 1.49e-106 337
Msa0012470 AT2G01760.1 57.962 314 107 6 12 318 6 301 1.70e-106 327
Msa0012470 AT2G01760.2 53.216 342 107 7 12 318 6 329 1.92e-100 312
Msa0012470 AT3G16857.3 53.169 284 115 3 51 316 1 284 2.97e-89 290
Msa0012470 AT1G67710.1 59.608 255 93 5 10 260 4 252 3.68e-88 284
Msa0012470 AT2G25180.1 56.274 263 106 3 12 273 12 266 1.83e-87 284
Msa0012470 AT4G31920.1 52.344 256 103 2 12 267 12 248 8.36e-80 263
Msa0012470 AT2G01760.3 55.512 254 88 6 72 318 1 236 1.09e-74 242
Msa0012470 AT5G58080.1 46.154 312 140 5 12 311 13 308 1.21e-70 240
Msa0012470 AT1G67710.2 59.067 193 69 5 72 260 1 187 5.40e-60 207
Msa0012470 AT5G49240.1 38.868 265 141 6 10 267 35 285 1.70e-48 171
Msa0012470 AT1G67710.3 54.335 173 69 5 92 260 12 178 4.89e-44 163
Msa0012470 AT1G49190.1 34.028 288 162 4 12 285 29 302 8.23e-44 162
Msa0012470 AT3G62670.1 33.537 328 177 10 18 329 42 344 3.32e-40 152
Msa0012470 AT5G07210.2 30.986 284 167 6 3 261 2 281 1.10e-32 133
Msa0012470 AT5G07210.1 30.479 292 166 7 3 261 2 289 1.54e-30 127
Msa0012470 AT1G49190.2 43.651 126 71 0 12 137 29 154 8.18e-28 119
Msa0012470 AT2G27070.1 30.108 279 158 8 17 266 16 286 1.52e-25 111
Msa0012470 AT2G46790.3 39.516 124 70 2 17 136 37 159 5.20e-24 105
Msa0012470 AT2G46790.1 39.516 124 70 2 17 136 37 159 6.41e-24 105
Msa0012470 AT5G24470.1 40.323 124 69 2 16 135 49 171 4.49e-23 103
Msa0012470 AT5G60100.7 39.516 124 70 2 17 136 64 186 1.59e-22 100
Msa0012470 AT5G60100.6 39.516 124 70 2 17 136 64 186 1.59e-22 100
Msa0012470 AT5G60100.4 39.516 124 70 2 17 136 64 186 1.59e-22 100
Msa0012470 AT5G60100.5 39.516 124 70 2 17 136 64 186 2.62e-22 101
Msa0012470 AT5G60100.3 39.516 124 70 2 17 136 64 186 2.62e-22 101
Msa0012470 AT5G60100.1 39.516 124 70 2 17 136 64 186 2.62e-22 101
Msa0012470 AT5G59570.2 51.163 86 42 0 183 268 122 207 4.14e-22 97.8
Msa0012470 AT5G59570.1 51.163 86 42 0 183 268 122 207 4.14e-22 97.8
Msa0012470 AT5G60100.2 39.516 124 70 2 17 136 64 186 4.72e-22 100
Msa0012470 AT5G05090.1 62.687 67 24 1 195 260 73 139 3.12e-21 94.4
Msa0012470 AT3G46640.2 64.516 62 22 0 199 260 141 202 5.00e-21 95.1
Msa0012470 AT3G46640.1 64.516 62 22 0 199 260 141 202 5.00e-21 95.1
Msa0012470 AT3G46640.3 56.000 75 33 0 186 260 128 202 6.42e-21 94.7
Msa0012470 AT3G10760.1 62.687 67 24 1 195 260 97 163 7.74e-21 94.7
Msa0012470 AT2G40970.1 62.903 62 23 0 199 260 102 163 1.39e-20 92.0
Msa0012470 AT5G44190.2 42.520 127 66 3 193 315 141 264 5.40e-19 89.4
Msa0012470 AT1G68210.1 25.556 270 175 7 17 261 13 281 5.83e-19 91.7
Msa0012470 AT5G61380.1 35.246 122 76 1 17 135 19 140 6.53e-19 91.3
Msa0012470 AT5G44190.1 42.520 127 66 3 193 315 141 264 7.79e-19 89.4
Msa0012470 AT5G02810.1 37.097 124 73 2 17 136 78 200 2.12e-18 89.7
Msa0012470 AT2G20570.1 48.810 84 41 1 177 260 130 211 4.69e-16 81.3
Msa0012470 AT4G18020.3 34.586 133 78 1 137 260 222 354 5.13e-16 81.6
Msa0012470 AT4G18020.3 33.582 134 80 3 13 139 14 145 1.37e-12 70.9
Msa0012470 AT4G18020.2 34.586 133 78 1 137 260 222 354 5.13e-16 81.6
Msa0012470 AT4G18020.2 33.582 134 80 3 13 139 14 145 1.37e-12 70.9
Msa0012470 AT4G18020.1 34.586 133 78 1 137 260 222 354 5.13e-16 81.6
Msa0012470 AT4G18020.1 33.582 134 80 3 13 139 14 145 1.37e-12 70.9
Msa0012470 AT4G18020.6 34.586 133 78 1 137 260 222 354 5.13e-16 81.6
Msa0012470 AT4G18020.6 33.582 134 80 3 13 139 14 145 1.37e-12 70.9
Msa0012470 AT4G18020.9 34.586 133 78 1 137 260 222 354 5.13e-16 81.6
Msa0012470 AT4G18020.9 33.582 134 80 3 13 139 14 145 1.37e-12 70.9
Msa0012470 AT4G18020.8 34.586 133 78 1 137 260 222 354 6.05e-16 81.3
Msa0012470 AT4G18020.8 33.582 134 80 3 13 139 14 145 1.06e-12 71.2
Msa0012470 AT4G18020.11 34.586 133 78 1 137 260 222 354 6.05e-16 81.3
Msa0012470 AT4G18020.11 33.582 134 80 3 13 139 14 145 1.06e-12 71.2
Msa0012470 AT4G18020.4 34.586 133 78 1 137 260 222 354 6.05e-16 81.3
Msa0012470 AT4G18020.4 33.582 134 80 3 13 139 14 145 1.06e-12 71.2
Msa0012470 AT4G18020.5 34.586 133 78 1 137 260 222 354 6.05e-16 81.3
Msa0012470 AT4G18020.5 33.582 134 80 3 13 139 14 145 1.06e-12 71.2
Msa0012470 AT4G18020.10 34.586 133 78 1 137 260 222 354 6.05e-16 81.3
Msa0012470 AT4G18020.10 33.582 134 80 3 13 139 14 145 1.06e-12 71.2
Msa0012470 AT4G18020.7 34.586 133 78 1 137 260 222 354 6.05e-16 81.3
Msa0012470 AT4G18020.7 33.582 134 80 3 13 139 14 145 1.06e-12 71.2
Msa0012470 AT2G20570.2 64.912 57 20 0 204 260 171 227 1.63e-15 79.7
Msa0012470 AT3G04030.1 55.932 59 25 1 198 255 41 99 4.50e-14 74.7
Msa0012470 AT3G04030.3 55.932 59 25 1 198 255 41 99 5.16e-14 74.7
Msa0012470 AT5G18240.2 57.627 59 24 1 198 255 41 99 5.51e-14 74.7
Msa0012470 AT5G18240.3 57.627 59 24 1 198 255 41 99 5.51e-14 74.7
Msa0012470 AT5G18240.5 57.627 59 24 1 198 255 41 99 5.85e-14 74.7
Msa0012470 AT5G18240.1 57.627 59 24 1 198 255 41 99 6.14e-14 74.7
Msa0012470 AT5G18240.4 57.627 59 24 1 198 255 41 99 6.14e-14 74.7
Msa0012470 AT1G79430.2 59.322 59 23 1 198 255 30 88 1.91e-13 72.8
Msa0012470 AT3G24120.2 57.627 59 24 1 198 255 37 95 2.16e-13 71.6
Msa0012470 AT3G24120.1 57.627 59 24 1 198 255 37 95 2.19e-13 71.6
Msa0012470 AT4G13640.1 57.627 59 24 1 198 255 33 91 4.89e-13 70.5
Msa0012470 AT4G13640.2 57.627 59 24 1 198 255 33 91 4.92e-13 70.5
Msa0012470 AT3G04030.2 51.724 58 28 0 198 255 41 98 5.97e-13 71.6
Msa0012470 AT1G69580.2 52.542 59 27 1 198 255 30 88 6.59e-13 70.9
Msa0012470 AT1G69580.1 52.542 59 27 1 198 255 30 88 6.66e-13 70.9
Msa0012470 AT3G12730.1 54.237 59 26 1 198 255 19 77 2.69e-12 67.4
Msa0012470 AT3G57040.2 28.276 145 82 2 19 141 11 155 1.20e-11 65.5
Msa0012470 AT3G57040.1 28.276 145 82 2 19 141 11 155 1.20e-11 65.5
Msa0012470 AT2G01060.1 50.725 69 31 2 190 255 1 69 1.79e-11 65.9
Msa0012470 AT5G45580.1 52.727 55 25 1 202 255 7 61 1.86e-11 65.5
Msa0012470 AT3G04450.3 51.724 58 27 1 198 254 234 291 3.93e-11 65.1
Msa0012470 AT5G29000.4 55.172 58 24 2 198 254 228 284 6.14e-11 64.3
Msa0012470 AT3G04450.1 51.724 58 27 1 198 254 234 291 6.44e-11 65.5
Msa0012470 AT3G04450.4 51.724 58 27 1 198 254 194 251 6.60e-11 65.1
Msa0012470 AT3G04450.2 51.724 58 27 1 198 254 194 251 6.60e-11 65.1
Msa0012470 AT2G03500.1 48.438 64 32 1 199 261 230 293 9.78e-11 64.7

Find 163 sgRNAs with CRISPR-Local

Find 490 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTGAATATTGTTATTTA+TGG 0.028003 1_1:-18694535 None:intergenic
TGAAGAGCTGCAAGTGTTTC+AGG 0.164593 1_1:-18693940 None:intergenic
CACGAGCTCCGGTGAGTTTC+CGG 0.180858 1_1:+18688735 Msa0012470:CDS
GAGTTTGATTTGAACTTAGA+AGG 0.268269 1_1:-18688624 None:intergenic
ATGGCTTCTTGCCGGAAAAT+TGG 0.269998 1_1:+18695398 Msa0012470:three_prime_UTR
TCTTTGTTTATAATGTAAAA+TGG 0.270598 1_1:+18695434 Msa0012470:three_prime_UTR
GTGAGTTTCCGGCTGGGTTA+AGG 0.272505 1_1:+18688746 Msa0012470:CDS
GCCGGAAAATTGGTATTTAT+AGG 0.276766 1_1:+18695408 Msa0012470:three_prime_UTR
ATTTCAACTGATTGAACTAA+TGG 0.292501 1_1:+18695379 Msa0012470:three_prime_UTR
CTTAGAAATCTTGGATTTGT+TGG 0.296022 1_1:+18694675 Msa0012470:CDS
CCGGAAAATTGGTATTTATA+GGG 0.296373 1_1:+18695409 Msa0012470:three_prime_UTR
GCTCTTCAGGCGGAGCTCTT+AGG 0.299128 1_1:+18693955 Msa0012470:CDS
ATCATTTCAAGTATTCTCTT+TGG 0.304128 1_1:-18692503 None:intergenic
TTCAAGTGCATTCACTTAAT+AGG 0.309196 1_1:+18694884 Msa0012470:exon
GTCAACAAGGATAGCAGTTT+TGG 0.309228 1_1:+18694381 Msa0012470:CDS
AATAAGGAACATGATAATTC+TGG 0.316091 1_1:+18692098 Msa0012470:CDS
TGAAACACTTGCAGCTCTTC+AGG 0.318742 1_1:+18693942 Msa0012470:CDS
TAAAATCATTTGCAGATGAT+TGG 0.319690 1_1:-18694734 None:intergenic
TGAGTTTCCGGCTGGGTTAA+GGG 0.325512 1_1:+18688747 Msa0012470:CDS
TAGTCAAATGAAAGTATTCA+TGG 0.326858 1_1:+18694755 Msa0012470:CDS
ATATGACTCGGTTCCTCCTT+TGG 0.330245 1_1:-18694807 None:intergenic
GAAGTATGTCTTAGAAATCT+TGG 0.340115 1_1:+18694666 Msa0012470:CDS
CAAAACTCAACTTTAACATT+TGG 0.341966 1_1:+18694561 Msa0012470:CDS
GAATCCAAGCTTGCTGCTAC+TGG 0.348004 1_1:+18693874 Msa0012470:CDS
ATACAGGCTTTGGCTGGTTC+TGG 0.349018 1_1:+18693907 Msa0012470:CDS
GATGACTCTAACTCTGATAA+AGG 0.352635 1_1:+18695254 Msa0012470:three_prime_UTR
AAATGTTGCAAGTCATTTGC+AGG 0.369685 1_1:+18692550 Msa0012470:CDS
GATGAGTCATCATCAGTATA+TGG 0.370458 1_1:+18694126 Msa0012470:CDS
AGAGGATATTTGAGGAGAAA+TGG 0.372882 1_1:-18694499 None:intergenic
TGGAAGAACTAAGGAATATA+TGG 0.378920 1_1:+18692045 Msa0012470:CDS
GTAGGCATTATGTTAGTTGC+CGG 0.379535 1_1:-18693982 None:intergenic
GACAACACTTCTTCTGTTGC+TGG 0.380394 1_1:+18692167 Msa0012470:CDS
CTTTGAAAATTCTGCGAGAA+AGG 0.380677 1_1:+18691742 Msa0012470:CDS
GACCAGTTCTTACTAATAAC+AGG 0.381518 1_1:-18691858 None:intergenic
TTGAACTAATGGCTTCTTGC+CGG 0.385342 1_1:+18695390 Msa0012470:three_prime_UTR
TCAATCTTCTAATACCTTCC+AGG 0.399165 1_1:+18694338 Msa0012470:CDS
GATGGATAATTCTGTAGAAC+TGG 0.405841 1_1:-18694852 None:intergenic
TCGCTGGATTTAATATCATA+TGG 0.407074 1_1:-18694633 None:intergenic
CGAGGCTTCTTAGATGTAGA+TGG 0.408023 1_1:-18692269 None:intergenic
AGAACTGGGTGGCTCGCATT+TGG 0.408581 1_1:-18694837 None:intergenic
AATCTTGGATTTGTTGGAAA+AGG 0.408723 1_1:+18694681 Msa0012470:CDS
GTGGAAACAATATGTACCTT+TGG 0.409451 1_1:-18695163 None:intergenic
GCTGATGCTGGTGCCGTTGT+TGG 0.410400 1_1:-18694239 None:intergenic
CAATAGCTGCACATGTAACT+TGG 0.410478 1_1:+18695306 Msa0012470:three_prime_UTR
AGCTCCGGTGAGTTTCCGGC+TGG 0.413966 1_1:+18688739 Msa0012470:CDS
ATCAGAGTTAGAGTCATCAT+TGG 0.420176 1_1:-18695249 None:intergenic
TCTGTTGCTGGTGCAACAAA+AGG 0.420915 1_1:+18692179 Msa0012470:CDS
TGAACATGTTGGGTTGGAAA+TGG 0.424268 1_1:+18691830 Msa0012470:CDS
AATTCATAAACTAGTTTGTA+GGG 0.428890 1_1:+18695339 Msa0012470:three_prime_UTR
GGGATGTTAAACACAGTTCA+TGG 0.434178 1_1:+18693844 Msa0012470:CDS
ATAAACTCCTTGAACATGTT+GGG 0.438608 1_1:+18691820 Msa0012470:CDS
TAATTCATAAACTAGTTTGT+AGG 0.439580 1_1:+18695338 Msa0012470:three_prime_UTR
AGTTTATAGCCATCCATGTC+TGG 0.448144 1_1:-18691804 None:intergenic
TTTCCAACCCAACATGTTCA+AGG 0.451146 1_1:-18691827 None:intergenic
AGTTACATGTGCAGCTATTG+AGG 0.453181 1_1:-18695303 None:intergenic
GCATAGCTGCTTCTTCCGTA+GGG 0.453795 1_1:-18688696 None:intergenic
TGTTCAACCATCTTGCTTGG+TGG 0.455635 1_1:+18694308 Msa0012470:CDS
TGATTGACTATAATCAATAA+TGG 0.457615 1_1:-18694412 None:intergenic
AAGATATGACATACAGGCTT+TGG 0.459864 1_1:+18693897 Msa0012470:CDS
AAAAGATGAAGATGTTGAGT+TGG 0.460862 1_1:+18692235 Msa0012470:CDS
TCTTCCAGTAGCAGCAAGCT+TGG 0.461683 1_1:-18693878 None:intergenic
TCAGAGTTAGAGTCATCATT+GGG 0.472208 1_1:-18695248 None:intergenic
AATATGTACCTTTGGAGGTA+AGG 0.472769 1_1:-18695155 None:intergenic
CTTAGTTCTTCCATCCGTAC+AGG 0.475894 1_1:-18692035 None:intergenic
TCTCTTCGCTGTCATTATCA+AGG 0.476993 1_1:+18688820 Msa0012470:CDS
TCTGAGTTAAAGAGAGAAGA+GGG 0.478441 1_1:-18688587 None:intergenic
AGGTTAGTATATATGAATGT+TGG 0.479087 1_1:+18695274 Msa0012470:three_prime_UTR
CACAGTGAAGGAGGAGCCAA+AGG 0.479479 1_1:+18694791 Msa0012470:CDS
GGCATAGCTGCTTCTTCCGT+AGG 0.479883 1_1:-18688697 None:intergenic
ACTAATGCATGCATCTGTAC+AGG 0.484480 1_1:+18694020 Msa0012470:CDS
CAATGTTCAACCATCTTGCT+TGG 0.486283 1_1:+18694305 Msa0012470:CDS
TACTTCATCAAGTGAATCGC+TGG 0.487337 1_1:-18694649 None:intergenic
GGATATTTGAGGAGAAATGG+AGG 0.494211 1_1:-18694496 None:intergenic
TATAAACTCCTTGAACATGT+TGG 0.495307 1_1:+18691819 Msa0012470:CDS
CAGTGATGTCTGTTGATGAT+AGG 0.497216 1_1:+18691958 Msa0012470:intron
GAAGAGCTGCAAGTGTTTCA+GGG 0.504164 1_1:-18693939 None:intergenic
TATGACATACAGGCTTTGGC+TGG 0.508995 1_1:+18693901 Msa0012470:CDS
GTAGCTCTTGTGTCTCCGCC+AGG 0.509868 1_1:-18694474 None:intergenic
GTCTAAGTGTCAAGGGGAGA+AGG 0.513330 1_1:-18694605 None:intergenic
AATTTAGACTTTATTTGAAG+AGG 0.514433 1_1:+18693794 Msa0012470:CDS
TCGTTACAAAGCACGAGCTC+CGG 0.517814 1_1:+18688724 Msa0012470:CDS
GCTGCACATGTAACTTGGAA+TGG 0.523756 1_1:+18695311 Msa0012470:three_prime_UTR
TCGAGTTCATCTCAATATCC+TGG 0.526488 1_1:+18694456 Msa0012470:CDS
ACTCCTTGAACATGTTGGGT+TGG 0.526711 1_1:+18691824 Msa0012470:CDS
AGTGTCAAGGGGAGAAGGCT+AGG 0.528820 1_1:-18694600 None:intergenic
GTGGTGGCGCATCAACAGAA+TGG 0.530597 1_1:+18693823 Msa0012470:CDS
TACTGGAAGATATGACATAC+AGG 0.531861 1_1:+18693891 Msa0012470:CDS
TAGGCATTATGTTAGTTGCC+GGG 0.533217 1_1:-18693981 None:intergenic
CTAATGCATGCATCTGTACA+GGG 0.539995 1_1:+18694021 Msa0012470:CDS
TTCAAGTATTCTCTTTGGCA+CGG 0.540957 1_1:-18692498 None:intergenic
AAGCAACACTATTTACTGCC+TGG 0.549477 1_1:-18694356 None:intergenic
TGGCCGCCGTCTAGTACACT+CGG 0.552222 1_1:+18694153 Msa0012470:CDS
GGCGGAGCTCTTAGGTCACC+CGG 0.553138 1_1:+18693963 Msa0012470:CDS
TAGGACAAGTACTGTCATGA+AGG 0.556092 1_1:+18691977 Msa0012470:CDS
AACACTATTTACTGCCTGGA+AGG 0.557646 1_1:-18694352 None:intergenic
GGAACTTGTCTAAGTGTCAA+GGG 0.557917 1_1:-18694612 None:intergenic
TTTGAAGAGGTTAAGTGTGG+TGG 0.558644 1_1:+18693807 Msa0012470:CDS
TCAATCTCAAGTGGAAGGTT+AGG 0.559134 1_1:+18694177 Msa0012470:CDS
TAACCCAGCCGGAAACTCAC+CGG 0.561846 1_1:-18688743 None:intergenic
GAAACAATATGTACCTTTGG+AGG 0.562969 1_1:-18695160 None:intergenic
ATCTGAGTTAAAGAGAGAAG+AGG 0.563869 1_1:-18688588 None:intergenic
AAATTATTGACGATGTCGAA+AGG 0.566946 1_1:-18694081 None:intergenic
AAAGTATTCATGGCTAGCAA+TGG 0.567648 1_1:+18694765 Msa0012470:CDS
ATATTACATAACTGCCCCTA+CGG 0.568709 1_1:+18688681 Msa0012470:five_prime_UTR
TGGAACTTGTCTAAGTGTCA+AGG 0.569185 1_1:-18694613 None:intergenic
CTGTACGGATGGAAGAACTA+AGG 0.571403 1_1:+18692036 Msa0012470:CDS
AGATAATGATCGCAATACAC+GGG 0.572667 1_1:+18692130 Msa0012470:CDS
ATGCATGCATTAGTGCAGTC+CGG 0.579695 1_1:-18694011 None:intergenic
AATTATTGACGATGTCGAAA+GGG 0.582045 1_1:-18694080 None:intergenic
ATATATGGCAGCATGTTGCT+AGG 0.583349 1_1:+18692060 Msa0012470:CDS
AAAATTCTGCGAGAAAGGAA+AGG 0.584113 1_1:+18691747 Msa0012470:CDS
TGGTGGCGCATCAACAGAAT+GGG 0.586758 1_1:+18693824 Msa0012470:CDS
AGTGCAGTCCGGTCCACTGT+AGG 0.587668 1_1:-18694000 None:intergenic
ACATAATGCCTACAGTGGAC+CGG 0.591447 1_1:+18693992 Msa0012470:CDS
TTATTTGAAGAGGTTAAGTG+TGG 0.592282 1_1:+18693804 Msa0012470:CDS
AAGATAATGATCGCAATACA+CGG 0.600067 1_1:+18692129 Msa0012470:CDS
ACAAGAACCCTTAACCCAGC+CGG 0.601519 1_1:-18688754 None:intergenic
CAATGGAAACACAGTGAAGG+AGG 0.603246 1_1:+18694782 Msa0012470:CDS
GTCAGTGCTGTAAATCAACT+AGG 0.604605 1_1:+18692326 Msa0012470:CDS
CTTGAAATGATGAATGTCCC+TGG 0.605781 1_1:+18692515 Msa0012470:CDS
AAGGTATTAGAAGATTGAGC+AGG 0.607200 1_1:-18694333 None:intergenic
TCATGAAGGGAATTAGACAC+GGG 0.611444 1_1:+18691991 Msa0012470:CDS
TAGTGTTGCTTCTGTCAACA+AGG 0.611545 1_1:+18694368 Msa0012470:CDS
AGAGAAGACCTTACCTCCAA+AGG 0.611795 1_1:+18695147 Msa0012470:three_prime_UTR
GGATGTTAAACACAGTTCAT+GGG 0.616102 1_1:+18693845 Msa0012470:CDS
GCTCCGGTGAGTTTCCGGCT+GGG 0.616703 1_1:+18688740 Msa0012470:CDS
TTTGGATATCTGATATGACT+CGG 0.618478 1_1:-18694819 None:intergenic
CATCATCAGTATATGGAGCA+TGG 0.620082 1_1:+18694133 Msa0012470:CDS
AACACTTGCAGCTCTTCAGG+CGG 0.620247 1_1:+18693945 Msa0012470:CDS
GCAGGAACCACCAAGCAAGA+TGG 0.620808 1_1:-18694315 None:intergenic
AGGACAAGTACTGTCATGAA+GGG 0.622788 1_1:+18691978 Msa0012470:CDS
GACGATGTCGAAAGGGCTGT+AGG 0.623972 1_1:-18694073 None:intergenic
GCACTTGAATGATCATGAGA+TGG 0.624506 1_1:-18694870 None:intergenic
GTCATGAAGGGAATTAGACA+CGG 0.627814 1_1:+18691990 Msa0012470:CDS
CAAGTGTTTCAGGGGAAACG+TGG 0.629851 1_1:-18693930 None:intergenic
CTCGTGCTTTGTAACGACGC+AGG 0.631605 1_1:-18688718 None:intergenic
CTAAGAAGCCTCGTGTAGTG+TGG 0.636384 1_1:+18692279 Msa0012470:CDS
AAGGGGAGAAGGCTAGGCAA+TGG 0.637218 1_1:-18694594 None:intergenic
TCGGGTCAATCTCAAGTGGA+AGG 0.637487 1_1:+18694172 Msa0012470:CDS
AAGAGCTGCAAGTGTTTCAG+GGG 0.639399 1_1:-18693938 None:intergenic
AGTGAAGGAGGAGCCAAAGG+AGG 0.646617 1_1:+18694794 Msa0012470:CDS
GTTCATATGCCAGACATGGA+TGG 0.651624 1_1:+18691795 Msa0012470:CDS
ACACTCGGGTCAATCTCAAG+TGG 0.652626 1_1:+18694168 Msa0012470:CDS
ATATATTGCAGCACCAACAA+CGG 0.653116 1_1:+18694226 Msa0012470:CDS
CATAGCTGCTTCTTCCGTAG+GGG 0.654286 1_1:-18688695 None:intergenic
GAACTTGTCTAAGTGTCAAG+GGG 0.665309 1_1:-18694611 None:intergenic
TAGCAATGGAAACACAGTGA+AGG 0.667347 1_1:+18694779 Msa0012470:CDS
GATAATGATCGCAATACACG+GGG 0.671509 1_1:+18692131 Msa0012470:CDS
GGCCGCCGTCTAGTACACTC+GGG 0.673948 1_1:+18694154 Msa0012470:CDS
TGATGTTCATATGCCAGACA+TGG 0.674601 1_1:+18691791 Msa0012470:CDS
CGTGCAGAATAGTAACACAC+TGG 0.679139 1_1:+18694200 Msa0012470:CDS
AGTTCTTACTAATAACAGGA+AGG 0.681007 1_1:-18691854 None:intergenic
TGCAGTCACTACATGCTCTG+AGG 0.686470 1_1:+18691710 Msa0012470:intron
TCTACTGACCACACTACACG+AGG 0.699174 1_1:-18692287 None:intergenic
GATAATTCTGTAGAACTGGG+TGG 0.703628 1_1:-18694848 None:intergenic
AACTAACATAATGCCTACAG+TGG 0.706212 1_1:+18693987 Msa0012470:CDS
TAATGCATGCATCTGTACAG+GGG 0.713759 1_1:+18694022 Msa0012470:CDS
ATGGATAATTCTGTAGAACT+GGG 0.722325 1_1:-18694851 None:intergenic
CATGAAGGGAATTAGACACG+GGG 0.726759 1_1:+18691992 Msa0012470:CDS
AGTTCATCTCAATATCCTGG+CGG 0.732197 1_1:+18694459 Msa0012470:CDS
GACCCGAGTGTACTAGACGG+CGG 0.735269 1_1:-18694156 None:intergenic
ATTGACCCGAGTGTACTAGA+CGG 0.751718 1_1:-18694159 None:intergenic
ATAATGATCGCAATACACGG+GGG 0.815289 1_1:+18692132 Msa0012470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTATTTAATCAGTAAA+TGG - chr1_1:18690408-18690427 None:intergenic 10.0%
!!! ATTAAATAATTATTTGTTGT+TGG + chr1_1:18690415-18690434 Msa0012470:intron 10.0%
!! ATAAATGAATAAACATTAAA+TGG - chr1_1:18690584-18690603 None:intergenic 10.0%
!! TTATTCATTTATTTATTTGA+AGG + chr1_1:18690592-18690611 Msa0012470:intron 10.0%
!! TATTCATTTATTTATTTGAA+GGG + chr1_1:18690593-18690612 Msa0012470:intron 10.0%
!! TCATCATAAATAAAAAATAA+TGG - chr1_1:18694931-18694950 None:intergenic 10.0%
!! TAAGGTTTAGTAATAAAAAA+GGG - chr1_1:18689966-18689985 None:intergenic 15.0%
!! AAATTTACCAAAATGTATAA+AGG - chr1_1:18690638-18690657 None:intergenic 15.0%
!!! ATTTTGGTAAATTTCTATTT+TGG + chr1_1:18690644-18690663 Msa0012470:intron 15.0%
!!! GAAAATTTTGAATGAAAATA+AGG + chr1_1:18692082-18692101 Msa0012470:CDS 15.0%
!! AATAGAAAGAAAAAAAAAGT+TGG - chr1_1:18692370-18692389 None:intergenic 15.0%
!! TTTATTAAATGCTAGATATA+CGG + chr1_1:18692744-18692763 Msa0012470:intron 15.0%
!!! TATTTTGGGTTTTAAATATT+AGG + chr1_1:18693269-18693288 Msa0012470:intron 15.0%
!! AACAGTATTTAAATTAGTAT+AGG - chr1_1:18693417-18693436 None:intergenic 15.0%
!! AATTAGATGTTAAGATTAAA+AGG + chr1_1:18693567-18693586 Msa0012470:intron 15.0%
!!! TCTTTGTTTATAATGTAAAA+TGG + chr1_1:18695434-18695453 Msa0012470:three_prime_UTR 15.0%
!! ACTAACTTTACGAAATTATT+TGG - chr1_1:18688863-18688882 None:intergenic 20.0%
!! TAAAATGACACATATATAAC+AGG - chr1_1:18688949-18688968 None:intergenic 20.0%
!! TGAAACGTTAGATTAATAAA+AGG + chr1_1:18689120-18689139 Msa0012470:intron 20.0%
!! AGATTAATAAAAGGAAACAT+CGG + chr1_1:18689129-18689148 Msa0012470:intron 20.0%
!! CAACTATAGTAACTAAAAAA+GGG - chr1_1:18689338-18689357 None:intergenic 20.0%
!! ACAACTATAGTAACTAAAAA+AGG - chr1_1:18689339-18689358 None:intergenic 20.0%
!!! TTGATTTAAAGCAAAATTAC+AGG - chr1_1:18689645-18689664 None:intergenic 20.0%
!! AATTATTACTAAACCTTACT+TGG + chr1_1:18689782-18689801 Msa0012470:intron 20.0%
!! GTAAGGTTTAGTAATAAAAA+AGG - chr1_1:18689967-18689986 None:intergenic 20.0%
!! AAGTTGAATGAAAATGTAAA+TGG - chr1_1:18690089-18690108 None:intergenic 20.0%
!! AACATAATATCAATCAAGAA+TGG + chr1_1:18690317-18690336 Msa0012470:intron 20.0%
!! GTAATCTAATTCATAAATGA+TGG - chr1_1:18690364-18690383 None:intergenic 20.0%
!!! TAATTATTTGTTGTTGGATT+TGG + chr1_1:18690421-18690440 Msa0012470:intron 20.0%
!!! TTTGGTTCCTATTAAAATTT+AGG + chr1_1:18690662-18690681 Msa0012470:intron 20.0%
!!! TACTTTTCTTTGTAAATCTA+TGG + chr1_1:18691046-18691065 Msa0012470:intron 20.0%
!! AATGACTGAAATAATTTAGA+GGG - chr1_1:18691179-18691198 None:intergenic 20.0%
!! TAATGACTGAAATAATTTAG+AGG - chr1_1:18691180-18691199 None:intergenic 20.0%
!!! ATTATTTTATTAAGCCTGTA+CGG + chr1_1:18692021-18692040 Msa0012470:CDS 20.0%
!! TAGTAAAAGAACAAAAAAAG+AGG + chr1_1:18692204-18692223 Msa0012470:CDS 20.0%
!!! TATGTGCTATTTTTCATATT+TGG + chr1_1:18692703-18692722 Msa0012470:intron 20.0%
!! TCTAGCATTTAATAAAAGAA+AGG - chr1_1:18692740-18692759 None:intergenic 20.0%
!!! TCATGAAAATAGATTCTTTT+TGG - chr1_1:18693039-18693058 None:intergenic 20.0%
!! CAAAGTTGTTATGAAATAAA+AGG + chr1_1:18693142-18693161 Msa0012470:intron 20.0%
!!! TCTTTTTATTATTCCCATTT+TGG + chr1_1:18693202-18693221 Msa0012470:intron 20.0%
!! AACTTGAATCAAATCAATAA+CGG - chr1_1:18693392-18693411 None:intergenic 20.0%
!!! TATATATGTATGTTTTCGAA+CGG + chr1_1:18693641-18693660 Msa0012470:intron 20.0%
!!! AATTTAGACTTTATTTGAAG+AGG + chr1_1:18693794-18693813 Msa0012470:CDS 20.0%
!! TGATTGACTATAATCAATAA+TGG - chr1_1:18694415-18694434 None:intergenic 20.0%
!!! TGGATTTTATTTTCAAAACT+TGG - chr1_1:18694717-18694736 None:intergenic 20.0%
!! GAAATAAGATAAACAGTTAA+CGG - chr1_1:18695029-18695048 None:intergenic 20.0%
!!! CTTATATGAAAATGTTTTTC+AGG + chr1_1:18695113-18695132 Msa0012470:intron 20.0%
!!! TAATTCATAAACTAGTTTGT+AGG + chr1_1:18695338-18695357 Msa0012470:three_prime_UTR 20.0%
!!! AATTCATAAACTAGTTTGTA+GGG + chr1_1:18695339-18695358 Msa0012470:three_prime_UTR 20.0%
!!! AGTCGTTTTTTTATTTTCCA+TGG + chr1_1:18688970-18688989 Msa0012470:intron 25.0%
! AGACAGTGAATTAACTTATA+AGG + chr1_1:18689077-18689096 Msa0012470:intron 25.0%
! TACATATAAAGAAACAAGTG+AGG + chr1_1:18689197-18689216 Msa0012470:intron 25.0%
! ACTAAAGACATAAAAGCAAA+TGG - chr1_1:18690044-18690063 None:intergenic 25.0%
! TTAAATGACACTAAGAGTAA+AGG - chr1_1:18690136-18690155 None:intergenic 25.0%
! AACATAGAACAAAAGAATGA+AGG - chr1_1:18690217-18690236 None:intergenic 25.0%
! TCTTGATTGATATTATGTTG+AGG - chr1_1:18690316-18690335 None:intergenic 25.0%
!! TTCTTTGCCTTTATACATTT+TGG + chr1_1:18690628-18690647 Msa0012470:intron 25.0%
!!! AAGGAAGCCTAAATTTTAAT+AGG - chr1_1:18690672-18690691 None:intergenic 25.0%
! ATTAAAATTTAGGCTTCCTT+AGG + chr1_1:18690672-18690691 Msa0012470:intron 25.0%
! ATAGGGTAACATATACTATT+TGG - chr1_1:18690794-18690813 None:intergenic 25.0%
! TCTACCAATACTTAACATAA+GGG - chr1_1:18690878-18690897 None:intergenic 25.0%
! ATGACTGAAATAATTTAGAG+GGG - chr1_1:18691178-18691197 None:intergenic 25.0%
! TAATGCTTAATACTGAAAAC+TGG + chr1_1:18691918-18691937 Msa0012470:intron 25.0%
! AATAAGGAACATGATAATTC+TGG + chr1_1:18692098-18692117 Msa0012470:CDS 25.0%
!! TTGTTATTCTTGTATTTCAG+AGG + chr1_1:18692475-18692494 Msa0012470:intron 25.0%
!! ATCATTTCAAGTATTCTCTT+TGG - chr1_1:18692506-18692525 None:intergenic 25.0%
! TGTACATCAAATAATGAAGA+TGG - chr1_1:18692623-18692642 None:intergenic 25.0%
! AAGAAGAAGAAAAAGACTAA+AGG - chr1_1:18692666-18692685 None:intergenic 25.0%
! ATTCAACAATTGGAACAAAA+AGG - chr1_1:18692810-18692829 None:intergenic 25.0%
!! TTTTGGTGAATATCTTATCA+AGG - chr1_1:18693022-18693041 None:intergenic 25.0%
!! TTTTATTATTCCCATTTTGG+AGG + chr1_1:18693205-18693224 Msa0012470:intron 25.0%
!! TTTATTATTCCCATTTTGGA+GGG + chr1_1:18693206-18693225 Msa0012470:intron 25.0%
! TTTAGATGAGAATCTCTATT+GGG + chr1_1:18693322-18693341 Msa0012470:intron 25.0%
!! ACTTTCTGTAATGATTTTTC+AGG - chr1_1:18693364-18693383 None:intergenic 25.0%
! CTGTTATAAATATACGACAT+TGG + chr1_1:18693432-18693451 Msa0012470:intron 25.0%
! TAAATATACGACATTGGTAA+AGG + chr1_1:18693438-18693457 Msa0012470:intron 25.0%
! AAATATACGACATTGGTAAA+GGG + chr1_1:18693439-18693458 Msa0012470:intron 25.0%
! ATTAAAAGGACAAAGATATG+TGG + chr1_1:18693581-18693600 Msa0012470:intron 25.0%
!! ATATATGTATGTTTTCGAAC+GGG + chr1_1:18693642-18693661 Msa0012470:intron 25.0%
! TTAACATTACCATTGTGAAT+TGG + chr1_1:18693767-18693786 Msa0012470:intron 25.0%
!!! CTGCTGAATATTGTTATTTA+TGG - chr1_1:18694538-18694557 None:intergenic 25.0%
! CAAAACTCAACTTTAACATT+TGG + chr1_1:18694561-18694580 Msa0012470:CDS 25.0%
! TAAAATCATTTGCAGATGAT+TGG - chr1_1:18694737-18694756 None:intergenic 25.0%
!!! TAGTCAAATGAAAGTATTCA+TGG + chr1_1:18694755-18694774 Msa0012470:CDS 25.0%
!! TTTATCTTATTTCTCTGCAT+AGG + chr1_1:18695036-18695055 Msa0012470:intron 25.0%
! TCATATAAGATACTGTTTGA+CGG - chr1_1:18695102-18695121 None:intergenic 25.0%
!!! ATATGAAAATGTTTTTCAGG+TGG + chr1_1:18695116-18695135 Msa0012470:intron 25.0%
!! GTTTTTCTAAACAACTAAAG+TGG - chr1_1:18695185-18695204 None:intergenic 25.0%
! AGGTTAGTATATATGAATGT+TGG + chr1_1:18695274-18695293 Msa0012470:three_prime_UTR 25.0%
! ATTTCAACTGATTGAACTAA+TGG + chr1_1:18695379-18695398 Msa0012470:three_prime_UTR 25.0%
!! GAGTTTGATTTGAACTTAGA+AGG - chr1_1:18688627-18688646 None:intergenic 30.0%
! GAGTTTGACAACCTTATTTA+TGG + chr1_1:18689040-18689059 Msa0012470:intron 30.0%
TTAAGTGCTAATAGGAAAGA+AGG + chr1_1:18689154-18689173 Msa0012470:intron 30.0%
!! TGTTGATTCTCTTAGTGAAA+AGG + chr1_1:18689270-18689289 Msa0012470:intron 30.0%
! GTTGATTCTCTTAGTGAAAA+GGG + chr1_1:18689271-18689290 Msa0012470:intron 30.0%
AGTAACTAAAAAAGGGCAAA+GGG - chr1_1:18689504-18689523 None:intergenic 30.0%
TAGTAACTAAAAAAGGGCAA+AGG - chr1_1:18689505-18689524 None:intergenic 30.0%
CATATAATACACCAAATGGT+GGG + chr1_1:18689893-18689912 Msa0012470:intron 30.0%
! AAGAATGCATGTTTGAAGTA+AGG - chr1_1:18689984-18690003 None:intergenic 30.0%
AAGCAAATGGCATTTGAATT+GGG - chr1_1:18690031-18690050 None:intergenic 30.0%
AAAGCAAATGGCATTTGAAT+TGG - chr1_1:18690032-18690051 None:intergenic 30.0%
TGGAAAAGAAGATAATTGCA+AGG - chr1_1:18690069-18690088 None:intergenic 30.0%
CGAATTGAAAAAACACAAAC+AGG - chr1_1:18690276-18690295 None:intergenic 30.0%
GTGAAGTCTAACAAGTTATA+AGG - chr1_1:18690386-18690405 None:intergenic 30.0%
AAGTTAACCATACTTGACTT+AGG + chr1_1:18690496-18690515 Msa0012470:intron 30.0%
GAATAAGAGAGTTGAATAAC+AGG + chr1_1:18690721-18690740 Msa0012470:intron 30.0%
ATCACCCTTATGTTAAGTAT+TGG + chr1_1:18690871-18690890 Msa0012470:intron 30.0%
CTCTACCAATACTTAACATA+AGG - chr1_1:18690879-18690898 None:intergenic 30.0%
TCACAAAAGTTGTCACAAAT+TGG - chr1_1:18690952-18690971 None:intergenic 30.0%
GGCTAAATATAGAAATCTAG+AGG - chr1_1:18691115-18691134 None:intergenic 30.0%
TGGAAATATCAAGTTTGCAA+TGG + chr1_1:18691279-18691298 Msa0012470:intron 30.0%
AAATATCAAGTTTGCAATGG+AGG + chr1_1:18691282-18691301 Msa0012470:intron 30.0%
!! AGGTTGATTTTGAATATCTG+TGG + chr1_1:18691302-18691321 Msa0012470:intron 30.0%
! TTGATTTTGAATATCTGTGG+TGG + chr1_1:18691305-18691324 Msa0012470:intron 30.0%
GCAATTGACTAACATAGATA+TGG + chr1_1:18691597-18691616 Msa0012470:intron 30.0%
TATAAACTCCTTGAACATGT+TGG + chr1_1:18691819-18691838 Msa0012470:CDS 30.0%
ATAAACTCCTTGAACATGTT+GGG + chr1_1:18691820-18691839 Msa0012470:CDS 30.0%
AGTTCTTACTAATAACAGGA+AGG - chr1_1:18691857-18691876 None:intergenic 30.0%
TTCCTGTTATTAGTAAGAAC+TGG + chr1_1:18691856-18691875 Msa0012470:intron 30.0%
TTAATTCAACGAACAAGAAC+AGG - chr1_1:18691885-18691904 None:intergenic 30.0%
TGGAAGAACTAAGGAATATA+TGG + chr1_1:18692045-18692064 Msa0012470:CDS 30.0%
AAGATAATGATCGCAATACA+CGG + chr1_1:18692129-18692148 Msa0012470:CDS 30.0%
AAAAGATGAAGATGTTGAGT+TGG + chr1_1:18692235-18692254 Msa0012470:CDS 30.0%
!! TTTGCTTTTGCATTCAATGA+CGG + chr1_1:18692393-18692412 Msa0012470:intron 30.0%
AAGCAAATGACTTCACAAAT+TGG - chr1_1:18692583-18692602 None:intergenic 30.0%
AATAATGAAGATGGTTCTCA+AGG - chr1_1:18692614-18692633 None:intergenic 30.0%
!! ATTTTTCATATTTGGCCTTC+AGG + chr1_1:18692711-18692730 Msa0012470:intron 30.0%
ATAAAAGAAAGGTAACCTGA+AGG - chr1_1:18692729-18692748 None:intergenic 30.0%
TTCCAATTGTTGAATGTTCT+GGG + chr1_1:18692815-18692834 Msa0012470:intron 30.0%
! TGATTTTTACCAGTCAAATC+AGG - chr1_1:18692868-18692887 None:intergenic 30.0%
AATCACATGAATCTGTTGTT+AGG + chr1_1:18692883-18692902 Msa0012470:intron 30.0%
AACAAGAGTAGATGTATCTA+TGG + chr1_1:18693085-18693104 Msa0012470:intron 30.0%
!! TTATTATTCCCATTTTGGAG+GGG + chr1_1:18693207-18693226 Msa0012470:intron 30.0%
AGGTTAAAACTAATGCTGTT+GGG + chr1_1:18693231-18693250 Msa0012470:intron 30.0%
!!! TTTCATGGTGGTGTTATTTT+GGG + chr1_1:18693255-18693274 Msa0012470:intron 30.0%
ATAGAGATTCTCATCTAAAC+TGG - chr1_1:18693321-18693340 None:intergenic 30.0%
GTTTAGATGAGAATCTCTAT+TGG + chr1_1:18693321-18693340 Msa0012470:intron 30.0%
AAATTTCTGCCAATTCACAA+TGG - chr1_1:18693779-18693798 None:intergenic 30.0%
TTATTTGAAGAGGTTAAGTG+TGG + chr1_1:18693804-18693823 Msa0012470:CDS 30.0%
AATTATTGACGATGTCGAAA+GGG - chr1_1:18694083-18694102 None:intergenic 30.0%
AAATTATTGACGATGTCGAA+AGG - chr1_1:18694084-18694103 None:intergenic 30.0%
!! TGACTCATCTACTTTTAAGA+TGG - chr1_1:18694115-18694134 None:intergenic 30.0%
ACTGAAAAAGAGGATATTTG+AGG - chr1_1:18694510-18694529 None:intergenic 30.0%
!!! CAAATATCCTCTTTTTCAGT+AGG + chr1_1:18694510-18694529 Msa0012470:CDS 30.0%
TCGCTGGATTTAATATCATA+TGG - chr1_1:18694636-18694655 None:intergenic 30.0%
GAAGTATGTCTTAGAAATCT+TGG + chr1_1:18694666-18694685 Msa0012470:CDS 30.0%
CTTAGAAATCTTGGATTTGT+TGG + chr1_1:18694675-18694694 Msa0012470:CDS 30.0%
!! AATCTTGGATTTGTTGGAAA+AGG + chr1_1:18694681-18694700 Msa0012470:CDS 30.0%
! ATTTTCAAAACTTGGTATGC+AGG - chr1_1:18694709-18694728 None:intergenic 30.0%
TTTGGATATCTGATATGACT+CGG - chr1_1:18694822-18694841 None:intergenic 30.0%
ATGGATAATTCTGTAGAACT+GGG - chr1_1:18694854-18694873 None:intergenic 30.0%
TTCAAGTGCATTCACTTAAT+AGG + chr1_1:18694884-18694903 Msa0012470:exon 30.0%
! TAATATAAAGCGTCCATTCA+CGG - chr1_1:18694976-18694995 None:intergenic 30.0%
AATGGACGCTTTATATTAGT+TGG + chr1_1:18694978-18694997 Msa0012470:intron 30.0%
ATGGACGCTTTATATTAGTT+GGG + chr1_1:18694979-18694998 Msa0012470:intron 30.0%
CATATAAGATACTGTTTGAC+GGG - chr1_1:18695101-18695120 None:intergenic 30.0%
!!! AAATGTTTTTCAGGTGGAAA+TGG + chr1_1:18695122-18695141 Msa0012470:intron 30.0%
! CCCTATAAATACCAATTTTC+CGG - chr1_1:18695412-18695431 None:intergenic 30.0%
CCGGAAAATTGGTATTTATA+GGG + chr1_1:18695409-18695428 Msa0012470:three_prime_UTR 30.0%
TCTGAGTTAAAGAGAGAAGA+GGG - chr1_1:18688590-18688609 None:intergenic 35.0%
ATCTGAGTTAAAGAGAGAAG+AGG - chr1_1:18688591-18688610 None:intergenic 35.0%
ATATTACATAACTGCCCCTA+CGG + chr1_1:18688681-18688700 Msa0012470:five_prime_UTR 35.0%
!!! AGTGAGGTTTTAAATGAAGC+TGG + chr1_1:18689213-18689232 Msa0012470:intron 35.0%
!!! AGGTTTTAAATGAAGCTGGT+GGG + chr1_1:18689217-18689236 Msa0012470:intron 35.0%
!! TCACTTTTGGATTGATGTCT+TGG + chr1_1:18689312-18689331 Msa0012470:intron 35.0%
! CACTTTTGGATTGATGTCTT+GGG + chr1_1:18689313-18689332 Msa0012470:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr1_1:18689405-18689424 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr1_1:18689404-18689423 Msa0012470:intron 35.0%
CTGTCATCATGTCACATATA+TGG - chr1_1:18689565-18689584 None:intergenic 35.0%
TATGTGACATGATGACAGAT+AGG + chr1_1:18689567-18689586 Msa0012470:intron 35.0%
TGATGACAGATAGGTAGAAA+TGG + chr1_1:18689576-18689595 Msa0012470:intron 35.0%
GAATGATGCAAATGAGAAAG+TGG - chr1_1:18689748-18689767 None:intergenic 35.0%
!! TTACACAAGAGGTTGTTTCT+AGG - chr1_1:18689857-18689876 None:intergenic 35.0%
ACAACCTCTTGTGTAAAAAC+AGG + chr1_1:18689861-18689880 Msa0012470:intron 35.0%
CAACCTCTTGTGTAAAAACA+GGG + chr1_1:18689862-18689881 Msa0012470:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr1_1:18689405-18689424 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr1_1:18689404-18689423 Msa0012470:intron 35.0%
GCTGCATATAATACACCAAA+TGG + chr1_1:18689889-18689908 Msa0012470:intron 35.0%
GCATATAATACACCAAATGG+TGG + chr1_1:18689892-18689911 Msa0012470:intron 35.0%
AAATGGCATTTGAATTGGGA+TGG - chr1_1:18690027-18690046 None:intergenic 35.0%
TTCTGTGCATGTTTACACAT+TGG + chr1_1:18690235-18690254 Msa0012470:intron 35.0%
GTCTCATTAAACCGAAATCA+CGG + chr1_1:18690449-18690468 Msa0012470:intron 35.0%
TTAACCATACTTGACTTAGG+AGG + chr1_1:18690499-18690518 Msa0012470:intron 35.0%
AAAATTTAGGCTTCCTTAGG+TGG + chr1_1:18690675-18690694 Msa0012470:intron 35.0%
TAAGAGAGTTGAATAACAGG+AGG + chr1_1:18690724-18690743 Msa0012470:intron 35.0%
GGGTAACATATACTATTTGG+TGG - chr1_1:18690791-18690810 None:intergenic 35.0%
GTTACCCTATCTTATGTTAG+AGG + chr1_1:18690804-18690823 Msa0012470:intron 35.0%
TCTGCCTCTAACATAAGATA+GGG - chr1_1:18690811-18690830 None:intergenic 35.0%
ATCTGCCTCTAACATAAGAT+AGG - chr1_1:18690812-18690831 None:intergenic 35.0%
TTTCTGTCTCTCTATTGCTT+TGG + chr1_1:18691007-18691026 Msa0012470:intron 35.0%
CCATTTGCTTGACAACTTAT+GGG - chr1_1:18691076-18691095 None:intergenic 35.0%
!! CGGTTTTGTAAAGATGAGTT+GGG - chr1_1:18691136-18691155 None:intergenic 35.0%
CCAACTCATCTTTACAAAAC+CGG + chr1_1:18691134-18691153 Msa0012470:intron 35.0%
! ATTTTGAATATCTGTGGTGG+TGG + chr1_1:18691308-18691327 Msa0012470:intron 35.0%
GTCCTAAGTGGCAATTAAAA+TGG + chr1_1:18691334-18691353 Msa0012470:intron 35.0%
!!! CACCATTTTAATTGCCACTT+AGG - chr1_1:18691339-18691358 None:intergenic 35.0%
CTAAGTGGCAATTAAAATGG+TGG + chr1_1:18691337-18691356 Msa0012470:intron 35.0%
! GTGGTGATGACAATTATAGA+GGG + chr1_1:18691393-18691412 Msa0012470:intron 35.0%
!! TATTGAGCAATGATAGTGGA+AGG + chr1_1:18691416-18691435 Msa0012470:intron 35.0%
TCATTGGTAAGGGTGAAAAA+GGG + chr1_1:18691520-18691539 Msa0012470:intron 35.0%
! CTTTGAAAATTCTGCGAGAA+AGG + chr1_1:18691742-18691761 Msa0012470:CDS 35.0%
AAAATTCTGCGAGAAAGGAA+AGG + chr1_1:18691747-18691766 Msa0012470:CDS 35.0%
GACCAGTTCTTACTAATAAC+AGG - chr1_1:18691861-18691880 None:intergenic 35.0%
AAAACTGGTTATGTTCTGCA+CGG + chr1_1:18691933-18691952 Msa0012470:intron 35.0%
! TTTTATTAAGCCTGTACGGA+TGG + chr1_1:18692025-18692044 Msa0012470:CDS 35.0%
AGATAATGATCGCAATACAC+GGG + chr1_1:18692130-18692149 Msa0012470:CDS 35.0%
TTCAAGTATTCTCTTTGGCA+CGG - chr1_1:18692501-18692520 None:intergenic 35.0%
! CATTTTCTCTTGTTAGACCA+GGG - chr1_1:18692535-18692554 None:intergenic 35.0%
! ACATTTTCTCTTGTTAGACC+AGG - chr1_1:18692536-18692555 None:intergenic 35.0%
AACGTATGAAATTCCCATCA+AGG - chr1_1:18692780-18692799 None:intergenic 35.0%
GTTCCAATTGTTGAATGTTC+TGG + chr1_1:18692814-18692833 Msa0012470:intron 35.0%
TACCCAGAACATTCAACAAT+TGG - chr1_1:18692820-18692839 None:intergenic 35.0%
CTTTACAAGAGTTACTAAGG+TGG - chr1_1:18692948-18692967 None:intergenic 35.0%
GCTCTTTACAAGAGTTACTA+AGG - chr1_1:18692951-18692970 None:intergenic 35.0%
TCAAAACTATCAGTGCAACA+TGG + chr1_1:18692976-18692995 Msa0012470:intron 35.0%
! ATGTTTTGTATGTCACAGAG+AGG + chr1_1:18693108-18693127 Msa0012470:intron 35.0%
! TGTTTTGTATGTCACAGAGA+GGG + chr1_1:18693109-18693128 Msa0012470:intron 35.0%
!! TATTATTCCCATTTTGGAGG+GGG + chr1_1:18693208-18693227 Msa0012470:intron 35.0%
GAGGTTAAAACTAATGCTGT+TGG + chr1_1:18693230-18693249 Msa0012470:intron 35.0%
GGTTAAAACTAATGCTGTTG+GGG + chr1_1:18693232-18693251 Msa0012470:intron 35.0%
!!! GTTTCATGGTGGTGTTATTT+TGG + chr1_1:18693254-18693273 Msa0012470:intron 35.0%
AGACTAGTGATGTATGAGAA+AGG + chr1_1:18693476-18693495 Msa0012470:intron 35.0%
AGTGATGTATGAGAAAGGTT+AGG + chr1_1:18693481-18693500 Msa0012470:intron 35.0%
GACAAGTTCTTTCTATCACT+TGG - chr1_1:18693530-18693549 None:intergenic 35.0%
! TGTTTTGTAGTGCTTTACTG+TGG + chr1_1:18693744-18693763 Msa0012470:intron 35.0%
GGATGTTAAACACAGTTCAT+GGG + chr1_1:18693845-18693864 Msa0012470:CDS 35.0%
TACTGGAAGATATGACATAC+AGG + chr1_1:18693891-18693910 Msa0012470:CDS 35.0%
AAGATATGACATACAGGCTT+TGG + chr1_1:18693897-18693916 Msa0012470:CDS 35.0%
AACTAACATAATGCCTACAG+TGG + chr1_1:18693987-18694006 Msa0012470:CDS 35.0%
!!! CTACTTTTAAGATGGACTGA+GGG - chr1_1:18694107-18694126 None:intergenic 35.0%
!!! TCTACTTTTAAGATGGACTG+AGG - chr1_1:18694108-18694127 None:intergenic 35.0%
GATGAGTCATCATCAGTATA+TGG + chr1_1:18694126-18694145 Msa0012470:CDS 35.0%
ATATATTGCAGCACCAACAA+CGG + chr1_1:18694226-18694245 Msa0012470:CDS 35.0%
! AAGGTATTAGAAGATTGAGC+AGG - chr1_1:18694336-18694355 None:intergenic 35.0%
TCAATCTTCTAATACCTTCC+AGG + chr1_1:18694338-18694357 Msa0012470:CDS 35.0%
AGAGGATATTTGAGGAGAAA+TGG - chr1_1:18694502-18694521 None:intergenic 35.0%
TATGGATCCTACTGAAAAAG+AGG - chr1_1:18694520-18694539 None:intergenic 35.0%
! AAAGTATTCATGGCTAGCAA+TGG + chr1_1:18694765-18694784 Msa0012470:CDS 35.0%
GATGGATAATTCTGTAGAAC+TGG - chr1_1:18694855-18694874 None:intergenic 35.0%
GTTACTATTTGATCCGTGAA+TGG + chr1_1:18694960-18694979 Msa0012470:intron 35.0%
TGGACGCTTTATATTAGTTG+GGG + chr1_1:18694980-18694999 Msa0012470:intron 35.0%
! AATATGTACCTTTGGAGGTA+AGG - chr1_1:18695158-18695177 None:intergenic 35.0%
GAAACAATATGTACCTTTGG+AGG - chr1_1:18695163-18695182 None:intergenic 35.0%
GTGGAAACAATATGTACCTT+TGG - chr1_1:18695166-18695185 None:intergenic 35.0%
TCAGAGTTAGAGTCATCATT+GGG - chr1_1:18695251-18695270 None:intergenic 35.0%
ATCAGAGTTAGAGTCATCAT+TGG - chr1_1:18695252-18695271 None:intergenic 35.0%
GATGACTCTAACTCTGATAA+AGG + chr1_1:18695254-18695273 Msa0012470:three_prime_UTR 35.0%
GCCGGAAAATTGGTATTTAT+AGG + chr1_1:18695408-18695427 Msa0012470:three_prime_UTR 35.0%
! GAGAAGAGGGAGTACAAAAA+TGG - chr1_1:18688577-18688596 None:intergenic 40.0%
TCTCTTCGCTGTCATTATCA+AGG + chr1_1:18688820-18688839 Msa0012470:CDS 40.0%
CTTCATCGTCGCCATAAATA+AGG - chr1_1:18689054-18689073 None:intergenic 40.0%
CATCGGCATTAAGTGCTAAT+AGG + chr1_1:18689146-18689165 Msa0012470:intron 40.0%
!!! GAGGTTTTAAATGAAGCTGG+TGG + chr1_1:18689216-18689235 Msa0012470:intron 40.0%
TAGTGAAAAGGGCTATGTTG+AGG + chr1_1:18689282-18689301 Msa0012470:intron 40.0%
! TTGAGGTTGAAGCTCACTTT+TGG + chr1_1:18689299-18689318 Msa0012470:intron 40.0%
GTTGTTGACATGTGACTGTA+AGG + chr1_1:18689354-18689373 Msa0012470:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr1_1:18689398-18689417 Msa0012470:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr1_1:18689399-18689418 Msa0012470:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr1_1:18689430-18689449 Msa0012470:intron 40.0%
GAGATCAAGTACACCATCAT+TGG + chr1_1:18689612-18689631 Msa0012470:intron 40.0%
TGCAAATGAGAAAGTGGCAA+TGG - chr1_1:18689742-18689761 None:intergenic 40.0%
TCATGTGACTGAAATGTCAC+AGG + chr1_1:18689824-18689843 Msa0012470:intron 40.0%
! TGACTTGTGTACCGTGATTT+CGG - chr1_1:18690463-18690482 None:intergenic 40.0%
CCCATAAGTTGTCAAGCAAA+TGG + chr1_1:18691073-18691092 Msa0012470:intron 40.0%
GCCATTTGCTTGACAACTTA+TGG - chr1_1:18691077-18691096 None:intergenic 40.0%
!! CCGGTTTTGTAAAGATGAGT+TGG - chr1_1:18691137-18691156 None:intergenic 40.0%
!! CTTTACAAAACCGGCTTGTA+AGG + chr1_1:18691143-18691162 Msa0012470:intron 40.0%
! GAGACTTGAGCTTTTCCAAT+AGG + chr1_1:18691214-18691233 Msa0012470:intron 40.0%
TTGTAGCTGTCAACACCTAT+TGG - chr1_1:18691232-18691251 None:intergenic 40.0%
TTGACAGCTACAAACTGTGT+GGG + chr1_1:18691239-18691258 Msa0012470:intron 40.0%
AGTGGCAATTAAAATGGTGG+AGG + chr1_1:18691340-18691359 Msa0012470:intron 40.0%
! GTGGCAATTAAAATGGTGGA+GGG + chr1_1:18691341-18691360 Msa0012470:intron 40.0%
! GGTGGTGATGACAATTATAG+AGG + chr1_1:18691392-18691411 Msa0012470:intron 40.0%
!! AGGGTATTGAGCAATGATAG+TGG + chr1_1:18691412-18691431 Msa0012470:intron 40.0%
GTCATTGGTAAGGGTGAAAA+AGG + chr1_1:18691519-18691538 Msa0012470:intron 40.0%
TGATGTTCATATGCCAGACA+TGG + chr1_1:18691791-18691810 Msa0012470:CDS 40.0%
AGTTTATAGCCATCCATGTC+TGG - chr1_1:18691807-18691826 None:intergenic 40.0%
TTTCCAACCCAACATGTTCA+AGG - chr1_1:18691830-18691849 None:intergenic 40.0%
!! TGAACATGTTGGGTTGGAAA+TGG + chr1_1:18691830-18691849 Msa0012470:CDS 40.0%
!! CAGTGATGTCTGTTGATGAT+AGG + chr1_1:18691958-18691977 Msa0012470:intron 40.0%
! TAGGACAAGTACTGTCATGA+AGG + chr1_1:18691977-18691996 Msa0012470:CDS 40.0%
! AGGACAAGTACTGTCATGAA+GGG + chr1_1:18691978-18691997 Msa0012470:CDS 40.0%
GTCATGAAGGGAATTAGACA+CGG + chr1_1:18691990-18692009 Msa0012470:CDS 40.0%
TCATGAAGGGAATTAGACAC+GGG + chr1_1:18691991-18692010 Msa0012470:CDS 40.0%
ATATATGGCAGCATGTTGCT+AGG + chr1_1:18692060-18692079 Msa0012470:CDS 40.0%
GATAATGATCGCAATACACG+GGG + chr1_1:18692131-18692150 Msa0012470:CDS 40.0%
ATAATGATCGCAATACACGG+GGG + chr1_1:18692132-18692151 Msa0012470:CDS 40.0%
GTCAGTGCTGTAAATCAACT+AGG + chr1_1:18692326-18692345 Msa0012470:CDS 40.0%
! TTCAATGACGGAGACTTCTT+TGG + chr1_1:18692405-18692424 Msa0012470:intron 40.0%
CTTGAAATGATGAATGTCCC+TGG + chr1_1:18692515-18692534 Msa0012470:CDS 40.0%
! ACGGTTTTCTACTACCTTGA+TGG + chr1_1:18692763-18692782 Msa0012470:intron 40.0%
! CGGTTTTCTACTACCTTGAT+GGG + chr1_1:18692764-18692783 Msa0012470:intron 40.0%
AAATGAACACTGCGTAGACT+TGG + chr1_1:18692841-18692860 Msa0012470:intron 40.0%
AATGAACACTGCGTAGACTT+GGG + chr1_1:18692842-18692861 Msa0012470:intron 40.0%
!!! TGCACTGATAGTTTTGACAC+AGG - chr1_1:18692973-18692992 None:intergenic 40.0%
AGAATCTCTATTGGGTCATG+CGG + chr1_1:18693330-18693349 Msa0012470:intron 40.0%
! TACATCACTAGTCTCATTCC+AGG - chr1_1:18693470-18693489 None:intergenic 40.0%
TTTGAAGAGGTTAAGTGTGG+TGG + chr1_1:18693807-18693826 Msa0012470:CDS 40.0%
GGGATGTTAAACACAGTTCA+TGG + chr1_1:18693844-18693863 Msa0012470:CDS 40.0%
TAGGCATTATGTTAGTTGCC+GGG - chr1_1:18693984-18694003 None:intergenic 40.0%
GTAGGCATTATGTTAGTTGC+CGG - chr1_1:18693985-18694004 None:intergenic 40.0%
ACTAATGCATGCATCTGTAC+AGG + chr1_1:18694020-18694039 Msa0012470:CDS 40.0%
CTAATGCATGCATCTGTACA+GGG + chr1_1:18694021-18694040 Msa0012470:CDS 40.0%
TAATGCATGCATCTGTACAG+GGG + chr1_1:18694022-18694041 Msa0012470:CDS 40.0%
CATCATCAGTATATGGAGCA+TGG + chr1_1:18694133-18694152 Msa0012470:CDS 40.0%
TCAATCTCAAGTGGAAGGTT+AGG + chr1_1:18694177-18694196 Msa0012470:CDS 40.0%
CAATGTTCAACCATCTTGCT+TGG + chr1_1:18694305-18694324 Msa0012470:CDS 40.0%
AACACTATTTACTGCCTGGA+AGG - chr1_1:18694355-18694374 None:intergenic 40.0%
AAGCAACACTATTTACTGCC+TGG - chr1_1:18694359-18694378 None:intergenic 40.0%
!! TAGTGTTGCTTCTGTCAACA+AGG + chr1_1:18694368-18694387 Msa0012470:CDS 40.0%
! GTCAACAAGGATAGCAGTTT+TGG + chr1_1:18694381-18694400 Msa0012470:CDS 40.0%
TCGAGTTCATCTCAATATCC+TGG + chr1_1:18694456-18694475 Msa0012470:CDS 40.0%
AGTTCATCTCAATATCCTGG+CGG + chr1_1:18694459-18694478 Msa0012470:CDS 40.0%
GGATATTTGAGGAGAAATGG+AGG - chr1_1:18694499-18694518 None:intergenic 40.0%
GAACTTGTCTAAGTGTCAAG+GGG - chr1_1:18694614-18694633 None:intergenic 40.0%
GGAACTTGTCTAAGTGTCAA+GGG - chr1_1:18694615-18694634 None:intergenic 40.0%
TGGAACTTGTCTAAGTGTCA+AGG - chr1_1:18694616-18694635 None:intergenic 40.0%
TACTTCATCAAGTGAATCGC+TGG - chr1_1:18694652-18694671 None:intergenic 40.0%
TAGCAATGGAAACACAGTGA+AGG + chr1_1:18694779-18694798 Msa0012470:CDS 40.0%
GATAATTCTGTAGAACTGGG+TGG - chr1_1:18694851-18694870 None:intergenic 40.0%
GCACTTGAATGATCATGAGA+TGG - chr1_1:18694873-18694892 None:intergenic 40.0%
! TAAGATACTGTTTGACGGGT+AGG - chr1_1:18695097-18695116 None:intergenic 40.0%
AGTTACATGTGCAGCTATTG+AGG - chr1_1:18695306-18695325 None:intergenic 40.0%
CAATAGCTGCACATGTAACT+TGG + chr1_1:18695306-18695325 Msa0012470:three_prime_UTR 40.0%
TTGAACTAATGGCTTCTTGC+CGG + chr1_1:18695390-18695409 Msa0012470:three_prime_UTR 40.0%
! TTAAATGAAGCTGGTGGGTG+AGG + chr1_1:18689222-18689241 Msa0012470:intron 45.0%
GACATGTGACTGTAAGGTCA+CGG + chr1_1:18689360-18689379 Msa0012470:intron 45.0%
ACATGTGACTGTAAGGTCAC+GGG + chr1_1:18689361-18689380 Msa0012470:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr1_1:18689394-18689413 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr1_1:18689426-18689445 Msa0012470:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr1_1:18689429-18689448 Msa0012470:intron 45.0%
GTTGTTGACATGCACGTTGA+AGG + chr1_1:18689527-18689546 Msa0012470:intron 45.0%
TACAGGAAGTCGACCAATGA+TGG - chr1_1:18689628-18689647 None:intergenic 45.0%
GCAATGGAAAGCAGCAGTAA+AGG - chr1_1:18689726-18689745 None:intergenic 45.0%
CTAAACCTTACTTGGCGCAA+CGG + chr1_1:18689790-18689809 Msa0012470:intron 45.0%
ACCATACTTGACTTAGGAGG+AGG + chr1_1:18690502-18690521 Msa0012470:intron 45.0%
TCCTCCTCCTAAGTCAAGTA+TGG - chr1_1:18690506-18690525 None:intergenic 45.0%
ATACTTGACTTAGGAGGAGG+AGG + chr1_1:18690505-18690524 Msa0012470:intron 45.0%
TACTTGACTTAGGAGGAGGA+GGG + chr1_1:18690506-18690525 Msa0012470:intron 45.0%
TTAGGAGGAGGAGGGTTAAA+AGG + chr1_1:18690514-18690533 Msa0012470:intron 45.0%
TGTCATATCGTGTCCACCTA+AGG - chr1_1:18690691-18690710 None:intergenic 45.0%
!! AAAACCGGCTTGTAAGGTGA+AGG + chr1_1:18691149-18691168 Msa0012470:intron 45.0%
GTTGACAGCTACAAACTGTG+TGG + chr1_1:18691238-18691257 Msa0012470:intron 45.0%
TGACAGCTACAAACTGTGTG+GGG + chr1_1:18691240-18691259 Msa0012470:intron 45.0%
GGGGTGGTAGAAGTAATGTT+TGG + chr1_1:18691259-18691278 Msa0012470:intron 45.0%
!! TTGAATATCTGTGGTGGTGG+AGG + chr1_1:18691311-18691330 Msa0012470:intron 45.0%
!! TGAATATCTGTGGTGGTGGA+GGG + chr1_1:18691312-18691331 Msa0012470:intron 45.0%
CAGCAGTTGCAAATGATGCT+AGG + chr1_1:18691371-18691390 Msa0012470:intron 45.0%
CAGTTGCAAATGATGCTAGG+TGG + chr1_1:18691374-18691393 Msa0012470:intron 45.0%
!! CAATGATAGTGGAAGGTGTC+AGG + chr1_1:18691423-18691442 Msa0012470:intron 45.0%
! AGGGTAAAGGAAGAAAGCGT+GGG + chr1_1:18691497-18691516 Msa0012470:intron 45.0%
AAAGCGTGGGTCATTGGTAA+GGG + chr1_1:18691510-18691529 Msa0012470:intron 45.0%
GTTCATATGCCAGACATGGA+TGG + chr1_1:18691795-18691814 Msa0012470:CDS 45.0%
ACTCCTTGAACATGTTGGGT+TGG + chr1_1:18691824-18691843 Msa0012470:CDS 45.0%
CATGAAGGGAATTAGACACG+GGG + chr1_1:18691992-18692011 Msa0012470:CDS 45.0%
! CTTAGTTCTTCCATCCGTAC+AGG - chr1_1:18692038-18692057 None:intergenic 45.0%
CTGTACGGATGGAAGAACTA+AGG + chr1_1:18692036-18692055 Msa0012470:CDS 45.0%
GACAACACTTCTTCTGTTGC+TGG + chr1_1:18692167-18692186 Msa0012470:CDS 45.0%
TCTGTTGCTGGTGCAACAAA+AGG + chr1_1:18692179-18692198 Msa0012470:CDS 45.0%
CGAGGCTTCTTAGATGTAGA+TGG - chr1_1:18692272-18692291 None:intergenic 45.0%
AAGGTGGTAGCATGGATGAT+AGG - chr1_1:18692932-18692951 None:intergenic 45.0%
GAGTTACTAAGGTGGTAGCA+TGG - chr1_1:18692940-18692959 None:intergenic 45.0%
TTAACCTCCCCCTCCAAAAT+GGG - chr1_1:18693218-18693237 None:intergenic 45.0%
TTTAACCTCCCCCTCCAAAA+TGG - chr1_1:18693219-18693238 None:intergenic 45.0%
CTAATGCTGTTGGGGTTTCA+TGG + chr1_1:18693240-18693259 Msa0012470:intron 45.0%
!! CATTGGTAAAGGGAGTATCC+TGG + chr1_1:18693449-18693468 Msa0012470:intron 45.0%
! TATGACATACAGGCTTTGGC+TGG + chr1_1:18693901-18693920 Msa0012470:CDS 45.0%
AAGAGCTGCAAGTGTTTCAG+GGG - chr1_1:18693941-18693960 None:intergenic 45.0%
GAAGAGCTGCAAGTGTTTCA+GGG - chr1_1:18693942-18693961 None:intergenic 45.0%
TGAAGAGCTGCAAGTGTTTC+AGG - chr1_1:18693943-18693962 None:intergenic 45.0%
TGAAACACTTGCAGCTCTTC+AGG + chr1_1:18693942-18693961 Msa0012470:CDS 45.0%
ACATAATGCCTACAGTGGAC+CGG + chr1_1:18693992-18694011 Msa0012470:CDS 45.0%
ATGCATGCATTAGTGCAGTC+CGG - chr1_1:18694014-18694033 None:intergenic 45.0%
ATTGACCCGAGTGTACTAGA+CGG - chr1_1:18694162-18694181 None:intergenic 45.0%
CGTGCAGAATAGTAACACAC+TGG + chr1_1:18694200-18694219 Msa0012470:CDS 45.0%
!!! GCTGTTGTTTTTGCTGATGC+TGG - chr1_1:18694254-18694273 None:intergenic 45.0%
TGTTCAACCATCTTGCTTGG+TGG + chr1_1:18694308-18694327 Msa0012470:CDS 45.0%
CAATGGAAACACAGTGAAGG+AGG + chr1_1:18694782-18694801 Msa0012470:CDS 45.0%
!! ATATGACTCGGTTCCTCCTT+TGG - chr1_1:18694810-18694829 None:intergenic 45.0%
AGAGAAGACCTTACCTCCAA+AGG + chr1_1:18695147-18695166 Msa0012470:three_prime_UTR 45.0%
GCTGCACATGTAACTTGGAA+TGG + chr1_1:18695311-18695330 Msa0012470:three_prime_UTR 45.0%
ATGGCTTCTTGCCGGAAAAT+TGG + chr1_1:18695398-18695417 Msa0012470:three_prime_UTR 45.0%
!!! TTATTTCTAATTTAATTTAA+TGG + chr1_1:18691564-18691583 Msa0012470:intron 5.0%
CATAGCTGCTTCTTCCGTAG+GGG - chr1_1:18688698-18688717 None:intergenic 50.0%
GCATAGCTGCTTCTTCCGTA+GGG - chr1_1:18688699-18688718 None:intergenic 50.0%
TCGTTACAAAGCACGAGCTC+CGG + chr1_1:18688724-18688743 Msa0012470:CDS 50.0%
TGAGTTTCCGGCTGGGTTAA+GGG + chr1_1:18688747-18688766 Msa0012470:CDS 50.0%
ACAAGAACCCTTAACCCAGC+CGG - chr1_1:18688757-18688776 None:intergenic 50.0%
! TCGCGGATTGTAAGAGTCCA+TGG - chr1_1:18688990-18689009 None:intergenic 50.0%
AAAAAGGGCAAAGGGCAACC+CGG - chr1_1:18689496-18689515 None:intergenic 50.0%
TGACATGCACGTTGAAGGCA+AGG + chr1_1:18689532-18689551 Msa0012470:intron 50.0%
CTTTACCGTTGCGCCAAGTA+AGG - chr1_1:18689798-18689817 None:intergenic 50.0%
TACTTGGCGCAACGGTAAAG+TGG + chr1_1:18689798-18689817 Msa0012470:intron 50.0%
GAGGAGGAGGGTTAAAAGGA+GGG + chr1_1:18690518-18690537 Msa0012470:intron 50.0%
TGGTAGAGCGTGATCAGTTG+TGG + chr1_1:18690891-18690910 Msa0012470:intron 50.0%
TAGAGCGTGATCAGTTGTGG+AGG + chr1_1:18690894-18690913 Msa0012470:intron 50.0%
GCATCCTTCACCTTACAAGC+CGG - chr1_1:18691156-18691175 None:intergenic 50.0%
!! TGATAGTGGAAGGTGTCAGG+CGG + chr1_1:18691426-18691445 Msa0012470:intron 50.0%
AGGTGATCTGAGAGGGTGAT+AGG + chr1_1:18691449-18691468 Msa0012470:intron 50.0%
TGATCTGAGAGGGTGATAGG+TGG + chr1_1:18691452-18691471 Msa0012470:intron 50.0%
ATAGGTGGCATATGTCGTCG+TGG + chr1_1:18691467-18691486 Msa0012470:intron 50.0%
TAGGTGGCATATGTCGTCGT+GGG + chr1_1:18691468-18691487 Msa0012470:intron 50.0%
GAGGGTAAAGGAAGAAAGCG+TGG + chr1_1:18691496-18691515 Msa0012470:intron 50.0%
! AGGAAGAAAGCGTGGGTCAT+TGG + chr1_1:18691504-18691523 Msa0012470:intron 50.0%
! GAAAGCGTGGGTCATTGGTA+AGG + chr1_1:18691509-18691528 Msa0012470:intron 50.0%
TGGTAGACCTAGTTCGTGTG+TGG + chr1_1:18691617-18691636 Msa0012470:intron 50.0%
AGACCTAGTTCGTGTGTGGA+TGG + chr1_1:18691621-18691640 Msa0012470:intron 50.0%
GACCTAGTTCGTGTGTGGAT+GGG + chr1_1:18691622-18691641 Msa0012470:intron 50.0%
AACCCATCCACACACGAACT+AGG - chr1_1:18691627-18691646 None:intergenic 50.0%
TCAGAGCATGTAGTGACTGC+AGG - chr1_1:18691711-18691730 None:intergenic 50.0%
TGCAGTCACTACATGCTCTG+AGG + chr1_1:18691710-18691729 Msa0012470:intron 50.0%
CTAAGAAGCCTCGTGTAGTG+TGG + chr1_1:18692279-18692298 Msa0012470:CDS 50.0%
TCTACTGACCACACTACACG+AGG - chr1_1:18692290-18692309 None:intergenic 50.0%
! AGACTTGGGCCTGATTTGAC+TGG + chr1_1:18692856-18692875 Msa0012470:intron 50.0%
!! TATTCCCATTTTGGAGGGGG+AGG + chr1_1:18693211-18693230 Msa0012470:intron 50.0%
ATGCTGTTGGGGTTTCATGG+TGG + chr1_1:18693243-18693262 Msa0012470:intron 50.0%
TCTCTATTGGGTCATGCGGA+AGG + chr1_1:18693334-18693353 Msa0012470:intron 50.0%
! TGGTGGCGCATCAACAGAAT+GGG + chr1_1:18693824-18693843 Msa0012470:CDS 50.0%
!! GAATCCAAGCTTGCTGCTAC+TGG + chr1_1:18693874-18693893 Msa0012470:CDS 50.0%
TCTTCCAGTAGCAGCAAGCT+TGG - chr1_1:18693881-18693900 None:intergenic 50.0%
! ATACAGGCTTTGGCTGGTTC+TGG + chr1_1:18693907-18693926 Msa0012470:CDS 50.0%
CAAGTGTTTCAGGGGAAACG+TGG - chr1_1:18693933-18693952 None:intergenic 50.0%
AACACTTGCAGCTCTTCAGG+CGG + chr1_1:18693945-18693964 Msa0012470:CDS 50.0%
ACACTCGGGTCAATCTCAAG+TGG + chr1_1:18694168-18694187 Msa0012470:CDS 50.0%
TCGGGTCAATCTCAAGTGGA+AGG + chr1_1:18694172-18694191 Msa0012470:CDS 50.0%
GTCTAAGTGTCAAGGGGAGA+AGG - chr1_1:18694608-18694627 None:intergenic 50.0%
! GATACTGTTTGACGGGTAGG+TGG - chr1_1:18695094-18695113 None:intergenic 50.0%
GGCATAGCTGCTTCTTCCGT+AGG - chr1_1:18688700-18688719 None:intergenic 55.0%
CTCGTGCTTTGTAACGACGC+AGG - chr1_1:18688721-18688740 None:intergenic 55.0%
TAACCCAGCCGGAAACTCAC+CGG - chr1_1:18688746-18688765 None:intergenic 55.0%
GTGAGTTTCCGGCTGGGTTA+AGG + chr1_1:18688746-18688765 Msa0012470:CDS 55.0%
GGACTCTTACAATCCGCGAG+TGG + chr1_1:18688991-18689010 Msa0012470:intron 55.0%
GAGTTCGTAGACTCCACTCG+CGG - chr1_1:18689007-18689026 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr1_1:18689373-18689392 Msa0012470:intron 55.0%
ACAAAGCTCCCGCATACGCA+GGG - chr1_1:18689932-18689951 None:intergenic 55.0%
! ATGCGGGAGCTTTGTGCACA+TGG + chr1_1:18689937-18689956 Msa0012470:intron 55.0%
GGAGGAGGAGGGTTAAAAGG+AGG + chr1_1:18690517-18690536 Msa0012470:intron 55.0%
CAGCTACAAACTGTGTGGGG+TGG + chr1_1:18691243-18691262 Msa0012470:intron 55.0%
AGGTGGCATATGTCGTCGTG+GGG + chr1_1:18691469-18691488 Msa0012470:intron 55.0%
! GTGGTGGCGCATCAACAGAA+TGG + chr1_1:18693823-18693842 Msa0012470:CDS 55.0%
GACGATGTCGAAAGGGCTGT+AGG - chr1_1:18694076-18694095 None:intergenic 55.0%
GCAGGAACCACCAAGCAAGA+TGG - chr1_1:18694318-18694337 None:intergenic 55.0%
AAGGGGAGAAGGCTAGGCAA+TGG - chr1_1:18694597-18694616 None:intergenic 55.0%
AGTGTCAAGGGGAGAAGGCT+AGG - chr1_1:18694603-18694622 None:intergenic 55.0%
CACAGTGAAGGAGGAGCCAA+AGG + chr1_1:18694791-18694810 Msa0012470:CDS 55.0%
AGTGAAGGAGGAGCCAAAGG+AGG + chr1_1:18694794-18694813 Msa0012470:CDS 55.0%
AGAACTGGGTGGCTCGCATT+TGG - chr1_1:18694840-18694859 None:intergenic 55.0%
CACGAGCTCCGGTGAGTTTC+CGG + chr1_1:18688735-18688754 Msa0012470:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr1_1:18689442-18689461 Msa0012470:intron 60.0%
CTGAAGCTCCCGCATACGCA+GGG - chr1_1:18689469-18689488 None:intergenic 60.0%
ACTGAAGCTCCCGCATACGC+AGG - chr1_1:18689470-18689489 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + chr1_1:18689474-18689493 Msa0012470:intron 60.0%
TGGGAAGGGGTCCCACCATT+TGG - chr1_1:18689907-18689926 None:intergenic 60.0%
CATACGCAGGGTCTGGGAAG+GGG - chr1_1:18689920-18689939 None:intergenic 60.0%
GCATACGCAGGGTCTGGGAA+GGG - chr1_1:18689921-18689940 None:intergenic 60.0%
CTTCCCAGACCCTGCGTATG+CGG + chr1_1:18689920-18689939 Msa0012470:intron 60.0%
TTCCCAGACCCTGCGTATGC+GGG + chr1_1:18689921-18689940 Msa0012470:intron 60.0%
CACAAAGCTCCCGCATACGC+AGG - chr1_1:18689933-18689952 None:intergenic 60.0%
!! TGGTGGTGGAGGGTCCTAAG+TGG + chr1_1:18691322-18691341 Msa0012470:intron 60.0%
!! TAGTGGAAGGTGTCAGGCGG+AGG + chr1_1:18691429-18691448 Msa0012470:intron 60.0%
TCAGGCGGAGGTGATCTGAG+AGG + chr1_1:18691441-18691460 Msa0012470:intron 60.0%
CAGGCGGAGGTGATCTGAGA+GGG + chr1_1:18691442-18691461 Msa0012470:intron 60.0%
GGTGGCATATGTCGTCGTGG+GGG + chr1_1:18691470-18691489 Msa0012470:intron 60.0%
GCATATGTCGTCGTGGGGGA+GGG + chr1_1:18691474-18691493 Msa0012470:intron 60.0%
GCTCTTCAGGCGGAGCTCTT+AGG + chr1_1:18693955-18693974 Msa0012470:CDS 60.0%
AGTGCAGTCCGGTCCACTGT+AGG - chr1_1:18694003-18694022 None:intergenic 60.0%
TGGCCGCCGTCTAGTACACT+CGG + chr1_1:18694153-18694172 Msa0012470:CDS 60.0%
GACCCGAGTGTACTAGACGG+CGG - chr1_1:18694159-18694178 None:intergenic 60.0%
!! GCTGATGCTGGTGCCGTTGT+TGG - chr1_1:18694242-18694261 None:intergenic 60.0%
GTAGCTCTTGTGTCTCCGCC+AGG - chr1_1:18694477-18694496 None:intergenic 60.0%
AGCTCCGGTGAGTTTCCGGC+TGG + chr1_1:18688739-18688758 Msa0012470:CDS 65.0%
GCTCCGGTGAGTTTCCGGCT+GGG + chr1_1:18688740-18688759 Msa0012470:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr1_1:18689444-18689463 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr1_1:18689457-18689476 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr1_1:18689458-18689477 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr1_1:18689457-18689476 Msa0012470:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr1_1:18689458-18689477 Msa0012470:intron 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + chr1_1:18689475-18689494 Msa0012470:intron 65.0%
CGCATACGCAGGGTCTGGGA+AGG - chr1_1:18689922-18689941 None:intergenic 65.0%
CTCCCGCATACGCAGGGTCT+GGG - chr1_1:18689926-18689945 None:intergenic 65.0%
GGCATATGTCGTCGTGGGGG+AGG + chr1_1:18691473-18691492 Msa0012470:intron 65.0%
TATGTCGTCGTGGGGGAGGG+AGG + chr1_1:18691477-18691496 Msa0012470:intron 65.0%
ATGTCGTCGTGGGGGAGGGA+GGG + chr1_1:18691478-18691497 Msa0012470:intron 65.0%
TCGTGGGGGAGGGAGGGTAA+AGG + chr1_1:18691484-18691503 Msa0012470:intron 65.0%
GGCGGAGCTCTTAGGTCACC+CGG + chr1_1:18693963-18693982 Msa0012470:CDS 65.0%
GGCCGCCGTCTAGTACACTC+GGG + chr1_1:18694154-18694173 Msa0012470:CDS 65.0%
CGCATACGCAGGGTCCGGGA+AGG - chr1_1:18689459-18689478 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG - chr1_1:18689463-18689482 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG - chr1_1:18689464-18689483 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+TGG - chr1_1:18689464-18689483 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 18688566 18695517 18688566 ID=Msa0012470;Name=Msa0012470
chr1_1 mRNA 18688566 18695517 18688566 ID=Msa0012470-mRNA-1;Parent=Msa0012470;Name=Msa0012470-mRNA-1;_AED=0.05;_eAED=0.05;_QI=149|1|1|1|0.8|0.66|6|386|620
chr1_1 exon 18688566 18688841 18688566 ID=Msa0012470-mRNA-1:exon:6906;Parent=Msa0012470-mRNA-1
chr1_1 exon 18691715 18691867 18691715 ID=Msa0012470-mRNA-1:exon:6907;Parent=Msa0012470-mRNA-1
chr1_1 exon 18691961 18692356 18691961 ID=Msa0012470-mRNA-1:exon:6908;Parent=Msa0012470-mRNA-1
chr1_1 exon 18692495 18692571 18692495 ID=Msa0012470-mRNA-1:exon:6909;Parent=Msa0012470-mRNA-1
chr1_1 exon 18693793 18694905 18693793 ID=Msa0012470-mRNA-1:exon:6910;Parent=Msa0012470-mRNA-1
chr1_1 exon 18695135 18695517 18695135 ID=Msa0012470-mRNA-1:exon:6911;Parent=Msa0012470-mRNA-1
chr1_1 five_prime_UTR 18688566 18688714 18688566 ID=Msa0012470-mRNA-1:five_prime_utr;Parent=Msa0012470-mRNA-1
chr1_1 CDS 18688715 18688841 18688715 ID=Msa0012470-mRNA-1:cds;Parent=Msa0012470-mRNA-1
chr1_1 CDS 18691715 18691867 18691715 ID=Msa0012470-mRNA-1:cds;Parent=Msa0012470-mRNA-1
chr1_1 CDS 18691961 18692356 18691961 ID=Msa0012470-mRNA-1:cds;Parent=Msa0012470-mRNA-1
chr1_1 CDS 18692495 18692571 18692495 ID=Msa0012470-mRNA-1:cds;Parent=Msa0012470-mRNA-1
chr1_1 CDS 18693793 18694902 18693793 ID=Msa0012470-mRNA-1:cds;Parent=Msa0012470-mRNA-1
chr1_1 three_prime_UTR 18694903 18694905 18694903 ID=Msa0012470-mRNA-1:three_prime_utr;Parent=Msa0012470-mRNA-1
chr1_1 three_prime_UTR 18695135 18695517 18695135 ID=Msa0012470-mRNA-1:three_prime_utr;Parent=Msa0012470-mRNA-1
Gene Sequence

>Msa0012470

ATGCCTGCGTCGTTACAAAGCACGAGCTCCGGTGAGTTTCCGGCTGGGTTAAGGGTTCTTGTTGTTGATGATGACGTCACTACGTTGAAGATAATTGAACAAATGTCTCTTCGCTGTCATTATCAAGTCACTACATGCTCTGAGGCTACTGTTGCTTTGAAAATTCTGCGAGAAAGGAAAGGCTGTTTTGATGTTGTGCTGAGTGATGTTCATATGCCAGACATGGATGGCTATAAACTCCTTGAACATGTTGGGTTGGAAATGGACCTTCCTGTTATTATGATGTCTGTTGATGATAGGACAAGTACTGTCATGAAGGGAATTAGACACGGGGCTTGTGATTATTTTATTAAGCCTGTACGGATGGAAGAACTAAGGAATATATGGCAGCATGTTGCTAGGAAAATTTTGAATGAAAATAAGGAACATGATAATTCTGGCAGCATAGAAGATAATGATCGCAATACACGGGGGAATGATGATAATGACAACACTTCTTCTGTTGCTGGTGCAACAAAAGGAATAGTAAAAGAACAAAAAAAGAGGAGCAATTTAAAAGATGAAGATGTTGAGTTGGAGAATGACGATCCATCTACATCTAAGAAGCCTCGTGTAGTGTGGTCAGTAGAACTGCATCAACAATTTGTCAGTGCTGTAAATCAACTAGGACTTGACAAGGCCGTGCCAAAGAGAATACTTGAAATGATGAATGTCCCTGGTCTAACAAGAGAAAATGTTGCAAGTCATTTGCAGAAATTTAGACTTTATTTGAAGAGGTTAAGTGTGGTGGCGCATCAACAGAATGGGATGTTAAACACAGTTCATGGGACTATAGAATCCAAGCTTGCTGCTACTGGAAGATATGACATACAGGCTTTGGCTGGTTCTGGCCACGTTTCCCCTGAAACACTTGCAGCTCTTCAGGCGGAGCTCTTAGGTCACCCGGCAACTAACATAATGCCTACAGTGGACCGGACTGCACTAATGCATGCATCTGTACAGGGGACAAAACATTCTCGTGCTGATGATCATGCCTACAGCCCTTTCGACATCGTCAATAATTTCCCTCAGTCCATCTTAAAAGTAGATGAGTCATCATCAGTATATGGAGCATGGCCGCCGTCTAGTACACTCGGGTCAATCTCAAGTGGAAGGTTAGGCGTGCAGAATAGTAACACACTGGTTGATATATTGCAGCACCAACAACGGCACCAGCATCAGCAAAAACAACAGCAGTCTCAGATGCATGATCAAAATCGATCAATCAATGTTCAACCATCTTGCTTGGTGGTTCCTGCTCAATCTTCTAATACCTTCCAGGCAGTAAATAGTGTTGCTTCTGTCAACAAGGATAGCAGTTTTGGCAGAAATGCCATTATTGATTATAGTCAATCATCACAAAAATCAAATACTTCATCGAGTTCATCTCAATATCCTGGCGGAGACACAAGAGCTACCTCCATTTCTCCTCAAATATCCTCTTTTTCAGTAGGATCCATAAATAACAATATTCAGCAGATTCAAAACTCAACTTTAACATTTGGTGCTGCTAGACCATTGCCTAGCCTTCTCCCCTTGACACTTAGACAAGTTCCATATGATATTAAATCCAGCGATTCACTTGATGAAGTATGTCTTAGAAATCTTGGATTTGTTGGAAAAGGTACCTGCATACCAAGTTTTGAAAATAAAATCCAATCATCTGCAAATGATTTTAGTCAAATGAAAGTATTCATGGCTAGCAATGGAAACACAGTGAAGGAGGAGCCAAAGGAGGAACCGAGTCATATCAGATATCCAAATGCGAGCCACCCAGTTCTACAGAATTATCCATCTCATGATCATTCAAGTGCATTCACTTAA
Protein sequence

>Msa0012470

MPASLQSTSSGEFPAGLRVLVVDDDVTTLKIIEQMSLRCHYQVTTCSEATVALKILRERKGCFDVVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSVDDRTSTVMKGIRHGACDYFIKPVRMEELRNIWQHVARKILNENKEHDNSGSIEDNDRNTRGNDDNDNTSSVAGATKGIVKEQKKRSNLKDEDVELENDDPSTSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILEMMNVPGLTRENVASHLQKFRLYLKRLSVVAHQQNGMLNTVHGTIESKLAATGRYDIQALAGSGHVSPETLAALQAELLGHPATNIMPTVDRTALMHASVQGTKHSRADDHAYSPFDIVNNFPQSILKVDESSSVYGAWPPSSTLGSISSGRLGVQNSNTLVDILQHQQRHQHQQKQQQSQMHDQNRSINVQPSCLVVPAQSSNTFQAVNSVASVNKDSSFGRNAIIDYSQSSQKSNTSSSSSQYPGGDTRATSISPQISSFSVGSINNNIQQIQNSTLTFGAARPLPSLLPLTLRQVPYDIKSSDSLDEVCLRNLGFVGKGTCIPSFENKIQSSANDFSQMKVFMASNGNTVKEEPKEEPSHIRYPNASHPVLQNYPSHDHSSAFT*