AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0144330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0144330 MtrunA17_Chr1g0161431 94.427 628 25 2 1 620 1 626 0.0 1133
Msa0144330 MtrunA17_Chr4g0067981 57.099 324 129 5 10 329 28 345 2.51e-114 356
Msa0144330 MtrunA17_Chr2g0294911 58.228 316 123 3 2 315 18 326 5.42e-113 350
Msa0144330 MtrunA17_Chr8g0376881 57.778 270 107 3 13 281 25 288 1.59e-97 308
Msa0144330 MtrunA17_Chr3g0123131 56.679 277 113 2 7 281 7 278 4.18e-97 308
Msa0144330 MtrunA17_Chr3g0137101 54.362 298 114 5 9 299 4 286 5.86e-94 302
Msa0144330 MtrunA17_Chr1g0149841 53.462 260 116 2 12 270 4 259 5.89e-85 274
Msa0144330 MtrunA17_Chr4g0074411 48.288 292 140 5 13 304 18 298 4.59e-80 265
Msa0144330 MtrunA17_Chr2g0304841 49.338 302 139 5 13 304 18 315 1.29e-79 265
Msa0144330 MtrunA17_Chr4g0074401 47.727 308 143 7 2 304 6 300 4.22e-78 259
Msa0144330 MtrunA17_Chr7g0275891 46.844 301 119 8 12 288 4 287 8.10e-75 243
Msa0144330 MtrunA17_Chr1g0149851 47.122 278 109 3 12 264 4 268 4.89e-72 241
Msa0144330 MtrunA17_Chr7g0275401 43.434 297 138 3 12 294 4 284 9.15e-71 230
Msa0144330 MtrunA17_Chr4g0009851 45.490 255 108 4 4 258 2 225 5.48e-68 224
Msa0144330 MtrunA17_Chr4g0009901 47.773 247 98 4 13 259 10 225 8.27e-68 222
Msa0144330 MtrunA17_Chr4g0074421 56.410 195 75 5 63 256 2 187 4.62e-61 201
Msa0144330 MtrunA17_Chr6g0471041 43.145 248 108 5 12 258 13 228 4.66e-57 198
Msa0144330 MtrunA17_Chr1g0149831 50.500 200 91 3 72 270 1 193 2.86e-56 190
Msa0144330 MtrunA17_Chr4g0009981 44.279 201 82 1 58 258 2 172 5.29e-52 179
Msa0144330 MtrunA17_Chr3g0134461 45.082 244 78 3 9 251 4 192 9.26e-52 176
Msa0144330 MtrunA17_Chr3g0134481 58.156 141 54 1 10 150 5 140 3.96e-44 155
Msa0144330 MtrunA17_Chr3g0134481 61.111 54 21 0 200 253 130 183 2.32e-16 77.8
Msa0144330 MtrunA17_Chr8g0383961 48.026 152 77 2 11 162 12 161 1.67e-41 151
Msa0144330 MtrunA17_Chr8g0391911 35.827 254 128 5 13 251 9 242 4.72e-41 149
Msa0144330 MtrunA17_Chr4g0011071 37.059 170 77 1 59 228 35 174 1.71e-32 123
Msa0144330 MtrunA17_Chr6g0456631 33.333 165 107 2 12 174 8 171 1.08e-27 109
Msa0144330 MtrunA17_Chr6g0473731 35.751 193 94 5 93 284 10 173 1.14e-25 110
Msa0144330 MtrunA17_Chr8g0350761 29.921 254 163 4 15 254 19 271 2.09e-25 110
Msa0144330 MtrunA17_Chr4g0009991 42.177 147 54 3 105 251 1 116 3.02e-25 101
Msa0144330 MtrunA17_Chr3g0127941 43.089 123 65 2 17 135 56 177 6.42e-25 109
Msa0144330 MtrunA17_Chr5g0423031 53.086 81 37 1 13 93 10 89 4.95e-23 96.7
Msa0144330 MtrunA17_Chr7g0276361 36.585 164 86 4 14 162 11 171 2.18e-22 101
Msa0144330 MtrunA17_Chr4g0010001 51.852 81 38 1 13 93 10 89 3.01e-22 91.3
Msa0144330 MtrunA17_Chr4g0031961 58.442 77 28 1 188 260 113 189 1.65e-21 95.9
Msa0144330 MtrunA17_Chr8g0345901 41.322 121 66 2 19 135 38 157 3.82e-21 97.8
Msa0144330 MtrunA17_Chr4g0030271 34.161 161 91 3 17 163 89 248 5.39e-21 97.8
Msa0144330 MtrunA17_Chr3g0091641 31.220 205 125 5 17 205 24 228 5.58e-21 97.1
Msa0144330 MtrunA17_Chr1g0181811 33.537 164 94 3 17 166 85 247 8.14e-21 97.1
Msa0144330 MtrunA17_Chr7g0255711 64.516 62 22 0 199 260 88 149 1.90e-20 92.4
Msa0144330 MtrunA17_Chr4g0061021 29.032 186 118 3 17 195 33 211 1.84e-19 92.4
Msa0144330 MtrunA17_Chr4g0040481 37.778 135 72 2 138 260 82 216 2.92e-17 84.7
Msa0144330 MtrunA17_Chr5g0400241 60.000 60 24 0 201 260 310 369 4.25e-17 84.7
Msa0144330 MtrunA17_Chr5g0400241 36.434 129 76 3 12 138 13 137 4.02e-15 78.6
Msa0144330 MtrunA17_Chr4g0054981 60.000 60 24 0 201 260 309 368 1.69e-16 82.8
Msa0144330 MtrunA17_Chr4g0054981 34.375 128 80 2 12 138 13 137 3.96e-14 75.5
Msa0144330 MtrunA17_Chr2g0324891 56.061 66 29 0 195 260 154 219 6.12e-16 80.5
Msa0144330 MtrunA17_Chr5g0417521 57.627 59 24 1 198 255 11 69 5.12e-15 77.0
Msa0144330 MtrunA17_Chr6g0469321 64.151 53 19 0 218 270 70 122 1.07e-14 72.8
Msa0144330 MtrunA17_Chr6g0461641 46.753 77 32 2 198 273 38 106 3.64e-14 74.7
Msa0144330 MtrunA17_Chr4g0042451 54.237 59 26 1 198 255 13 71 9.12e-14 73.2
Msa0144330 MtrunA17_Chr2g0321461 54.237 59 26 1 198 255 41 99 1.08e-13 73.2
Msa0144330 MtrunA17_Chr2g0310011 59.322 59 23 1 198 255 31 89 1.20e-13 72.8
Msa0144330 MtrunA17_Chr8g0356501 59.322 59 23 1 198 255 33 91 1.58e-13 72.4
Msa0144330 MtrunA17_Chr1g0198601 51.471 68 32 1 195 261 204 271 1.64e-13 72.8
Msa0144330 MtrunA17_Chr7g0256551 29.054 148 83 3 17 142 9 156 1.08e-12 68.2
Msa0144330 MtrunA17_Chr7g0274471 62.963 54 19 1 202 254 218 271 1.32e-12 70.1
Msa0144330 MtrunA17_Chr5g0402631 48.649 74 37 1 199 271 211 284 1.35e-12 69.7
Msa0144330 MtrunA17_Chr5g0422621 47.826 69 35 1 201 268 197 265 2.56e-12 68.9
Msa0144330 MtrunA17_Chr4g0062921 48.052 77 37 2 194 269 227 301 3.53e-12 68.9
Msa0144330 MtrunA17_Chr7g0261911 52.381 63 29 1 198 259 258 320 4.68e-12 68.6
Msa0144330 MtrunA17_Chr4g0045361 52.381 63 29 1 199 260 271 333 4.87e-12 68.2
Msa0144330 MtrunA17_Chr1g0197171 58.182 55 22 1 202 255 44 98 5.43e-12 67.0
Msa0144330 MtrunA17_Chr1g0190301 52.941 68 25 2 194 254 161 228 7.87e-12 67.4
Msa0144330 MtrunA17_Chr7g0254981 54.545 55 24 1 202 255 50 104 2.01e-11 65.1
Msa0144330 MtrunA17_Chr2g0290991 48.649 74 33 2 183 255 24 93 3.71e-11 64.7
Msa0144330 MtrunA17_Chr1g0175081 47.458 59 30 1 198 255 18 76 6.55e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0144330 AT3G16857.1 54.037 322 130 3 13 316 33 354 5.61e-107 337
Msa0144330 AT3G16857.2 54.037 322 130 3 13 316 33 354 1.49e-106 337
Msa0144330 AT2G01760.1 57.962 314 107 6 12 318 6 301 1.70e-106 327
Msa0144330 AT2G01760.2 53.216 342 107 7 12 318 6 329 1.92e-100 312
Msa0144330 AT3G16857.3 53.169 284 115 3 51 316 1 284 2.97e-89 290
Msa0144330 AT1G67710.1 59.608 255 93 5 10 260 4 252 3.68e-88 284
Msa0144330 AT2G25180.1 56.274 263 106 3 12 273 12 266 1.83e-87 284
Msa0144330 AT4G31920.1 52.344 256 103 2 12 267 12 248 8.36e-80 263
Msa0144330 AT2G01760.3 55.512 254 88 6 72 318 1 236 1.09e-74 242
Msa0144330 AT5G58080.1 46.154 312 140 5 12 311 13 308 1.21e-70 240
Msa0144330 AT1G67710.2 59.067 193 69 5 72 260 1 187 5.40e-60 207
Msa0144330 AT5G49240.1 38.868 265 141 6 10 267 35 285 1.70e-48 171
Msa0144330 AT1G67710.3 54.335 173 69 5 92 260 12 178 4.89e-44 163
Msa0144330 AT1G49190.1 34.028 288 162 4 12 285 29 302 8.23e-44 162
Msa0144330 AT3G62670.1 33.537 328 177 10 18 329 42 344 3.32e-40 152
Msa0144330 AT5G07210.2 30.986 284 167 6 3 261 2 281 1.10e-32 133
Msa0144330 AT5G07210.1 30.479 292 166 7 3 261 2 289 1.54e-30 127
Msa0144330 AT1G49190.2 43.651 126 71 0 12 137 29 154 8.18e-28 119
Msa0144330 AT2G27070.1 30.108 279 158 8 17 266 16 286 1.52e-25 111
Msa0144330 AT2G46790.3 39.516 124 70 2 17 136 37 159 5.20e-24 105
Msa0144330 AT2G46790.1 39.516 124 70 2 17 136 37 159 6.41e-24 105
Msa0144330 AT5G24470.1 40.323 124 69 2 16 135 49 171 4.49e-23 103
Msa0144330 AT5G60100.7 39.516 124 70 2 17 136 64 186 1.59e-22 100
Msa0144330 AT5G60100.6 39.516 124 70 2 17 136 64 186 1.59e-22 100
Msa0144330 AT5G60100.4 39.516 124 70 2 17 136 64 186 1.59e-22 100
Msa0144330 AT5G60100.5 39.516 124 70 2 17 136 64 186 2.62e-22 101
Msa0144330 AT5G60100.3 39.516 124 70 2 17 136 64 186 2.62e-22 101
Msa0144330 AT5G60100.1 39.516 124 70 2 17 136 64 186 2.62e-22 101
Msa0144330 AT5G59570.2 51.163 86 42 0 183 268 122 207 4.14e-22 97.8
Msa0144330 AT5G59570.1 51.163 86 42 0 183 268 122 207 4.14e-22 97.8
Msa0144330 AT5G60100.2 39.516 124 70 2 17 136 64 186 4.72e-22 100
Msa0144330 AT5G05090.1 62.687 67 24 1 195 260 73 139 3.12e-21 94.4
Msa0144330 AT3G46640.2 64.516 62 22 0 199 260 141 202 5.00e-21 95.1
Msa0144330 AT3G46640.1 64.516 62 22 0 199 260 141 202 5.00e-21 95.1
Msa0144330 AT3G46640.3 56.000 75 33 0 186 260 128 202 6.42e-21 94.7
Msa0144330 AT3G10760.1 62.687 67 24 1 195 260 97 163 7.74e-21 94.7
Msa0144330 AT2G40970.1 62.903 62 23 0 199 260 102 163 1.39e-20 92.0
Msa0144330 AT5G44190.2 42.520 127 66 3 193 315 141 264 5.40e-19 89.4
Msa0144330 AT1G68210.1 25.556 270 175 7 17 261 13 281 5.83e-19 91.7
Msa0144330 AT5G61380.1 35.246 122 76 1 17 135 19 140 6.53e-19 91.3
Msa0144330 AT5G44190.1 42.520 127 66 3 193 315 141 264 7.79e-19 89.4
Msa0144330 AT5G02810.1 37.097 124 73 2 17 136 78 200 2.12e-18 89.7
Msa0144330 AT2G20570.1 48.810 84 41 1 177 260 130 211 4.69e-16 81.3
Msa0144330 AT4G18020.3 34.586 133 78 1 137 260 222 354 5.13e-16 81.6
Msa0144330 AT4G18020.3 33.582 134 80 3 13 139 14 145 1.37e-12 70.9
Msa0144330 AT4G18020.2 34.586 133 78 1 137 260 222 354 5.13e-16 81.6
Msa0144330 AT4G18020.2 33.582 134 80 3 13 139 14 145 1.37e-12 70.9
Msa0144330 AT4G18020.1 34.586 133 78 1 137 260 222 354 5.13e-16 81.6
Msa0144330 AT4G18020.1 33.582 134 80 3 13 139 14 145 1.37e-12 70.9
Msa0144330 AT4G18020.6 34.586 133 78 1 137 260 222 354 5.13e-16 81.6
Msa0144330 AT4G18020.6 33.582 134 80 3 13 139 14 145 1.37e-12 70.9
Msa0144330 AT4G18020.9 34.586 133 78 1 137 260 222 354 5.13e-16 81.6
Msa0144330 AT4G18020.9 33.582 134 80 3 13 139 14 145 1.37e-12 70.9
Msa0144330 AT4G18020.8 34.586 133 78 1 137 260 222 354 6.05e-16 81.3
Msa0144330 AT4G18020.8 33.582 134 80 3 13 139 14 145 1.06e-12 71.2
Msa0144330 AT4G18020.11 34.586 133 78 1 137 260 222 354 6.05e-16 81.3
Msa0144330 AT4G18020.11 33.582 134 80 3 13 139 14 145 1.06e-12 71.2
Msa0144330 AT4G18020.4 34.586 133 78 1 137 260 222 354 6.05e-16 81.3
Msa0144330 AT4G18020.4 33.582 134 80 3 13 139 14 145 1.06e-12 71.2
Msa0144330 AT4G18020.5 34.586 133 78 1 137 260 222 354 6.05e-16 81.3
Msa0144330 AT4G18020.5 33.582 134 80 3 13 139 14 145 1.06e-12 71.2
Msa0144330 AT4G18020.10 34.586 133 78 1 137 260 222 354 6.05e-16 81.3
Msa0144330 AT4G18020.10 33.582 134 80 3 13 139 14 145 1.06e-12 71.2
Msa0144330 AT4G18020.7 34.586 133 78 1 137 260 222 354 6.05e-16 81.3
Msa0144330 AT4G18020.7 33.582 134 80 3 13 139 14 145 1.06e-12 71.2
Msa0144330 AT2G20570.2 64.912 57 20 0 204 260 171 227 1.63e-15 79.7
Msa0144330 AT3G04030.1 55.932 59 25 1 198 255 41 99 4.50e-14 74.7
Msa0144330 AT3G04030.3 55.932 59 25 1 198 255 41 99 5.16e-14 74.7
Msa0144330 AT5G18240.2 57.627 59 24 1 198 255 41 99 5.51e-14 74.7
Msa0144330 AT5G18240.3 57.627 59 24 1 198 255 41 99 5.51e-14 74.7
Msa0144330 AT5G18240.5 57.627 59 24 1 198 255 41 99 5.85e-14 74.7
Msa0144330 AT5G18240.1 57.627 59 24 1 198 255 41 99 6.14e-14 74.7
Msa0144330 AT5G18240.4 57.627 59 24 1 198 255 41 99 6.14e-14 74.7
Msa0144330 AT1G79430.2 59.322 59 23 1 198 255 30 88 1.91e-13 72.8
Msa0144330 AT3G24120.2 57.627 59 24 1 198 255 37 95 2.16e-13 71.6
Msa0144330 AT3G24120.1 57.627 59 24 1 198 255 37 95 2.19e-13 71.6
Msa0144330 AT4G13640.1 57.627 59 24 1 198 255 33 91 4.89e-13 70.5
Msa0144330 AT4G13640.2 57.627 59 24 1 198 255 33 91 4.92e-13 70.5
Msa0144330 AT3G04030.2 51.724 58 28 0 198 255 41 98 5.97e-13 71.6
Msa0144330 AT1G69580.2 52.542 59 27 1 198 255 30 88 6.59e-13 70.9
Msa0144330 AT1G69580.1 52.542 59 27 1 198 255 30 88 6.66e-13 70.9
Msa0144330 AT3G12730.1 54.237 59 26 1 198 255 19 77 2.69e-12 67.4
Msa0144330 AT3G57040.2 28.276 145 82 2 19 141 11 155 1.20e-11 65.5
Msa0144330 AT3G57040.1 28.276 145 82 2 19 141 11 155 1.20e-11 65.5
Msa0144330 AT2G01060.1 50.725 69 31 2 190 255 1 69 1.79e-11 65.9
Msa0144330 AT5G45580.1 52.727 55 25 1 202 255 7 61 1.86e-11 65.5
Msa0144330 AT3G04450.3 51.724 58 27 1 198 254 234 291 3.93e-11 65.1
Msa0144330 AT5G29000.4 55.172 58 24 2 198 254 228 284 6.14e-11 64.3
Msa0144330 AT3G04450.1 51.724 58 27 1 198 254 234 291 6.44e-11 65.5
Msa0144330 AT3G04450.4 51.724 58 27 1 198 254 194 251 6.60e-11 65.1
Msa0144330 AT3G04450.2 51.724 58 27 1 198 254 194 251 6.60e-11 65.1
Msa0144330 AT2G03500.1 48.438 64 32 1 199 261 230 293 9.78e-11 64.7

Find 163 sgRNAs with CRISPR-Local

Find 488 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTGAATATTGTTATTTA+TGG 0.028003 1_4:+3790495 None:intergenic
TGAAGAGCTGCAAGTGTTTC+AGG 0.164593 1_4:+3791090 None:intergenic
CACGAGCTCCGGTGAGTTTC+CGG 0.218361 1_4:-3796288 Msa0144330:CDS
GAGTTTGATTTGAACTTAGA+AGG 0.268269 1_4:+3796399 None:intergenic
ATGGCTTCTTGCCGGAAAAT+TGG 0.269998 1_4:-3789632 Msa0144330:three_prime_UTR
TCTTTGTTTATAATGTAAAA+TGG 0.270598 1_4:-3789596 Msa0144330:three_prime_UTR
GTGAGTTTCCGGCTGGGTTA+AGG 0.272505 1_4:-3796277 Msa0144330:CDS
GCCGGAAAATTGGTATTTAT+AGG 0.276766 1_4:-3789622 Msa0144330:three_prime_UTR
ATTTCAACTGATTGAACTAA+TGG 0.292501 1_4:-3789651 Msa0144330:three_prime_UTR
CTTAGAAATCTTGGATTTGT+TGG 0.296022 1_4:-3790355 Msa0144330:CDS
CCGGAAAATTGGTATTTATA+GGG 0.296373 1_4:-3789621 Msa0144330:three_prime_UTR
GCTCTTCAGGCGGAGCTCTT+AGG 0.299128 1_4:-3791075 Msa0144330:CDS
ATCATTTCAAGTATTCTCTT+TGG 0.304128 1_4:+3792527 None:intergenic
TTCAAGTGCATTCACTTAAT+AGG 0.309196 1_4:-3790146 Msa0144330:intron
GTCAACAAGGATAGCAGTTT+TGG 0.309228 1_4:-3790649 Msa0144330:CDS
AATAAGGAACATGATAATTC+TGG 0.316091 1_4:-3792932 Msa0144330:CDS
TGAAACACTTGCAGCTCTTC+AGG 0.318742 1_4:-3791088 Msa0144330:CDS
TAAAATCATTTGCAGATGAT+TGG 0.319690 1_4:+3790296 None:intergenic
TGAGTTTCCGGCTGGGTTAA+GGG 0.325512 1_4:-3796276 Msa0144330:CDS
TAGTCAAATGAAAGTATTCA+TGG 0.326858 1_4:-3790275 Msa0144330:CDS
ATATGACTCGGTTCCTCCTT+TGG 0.330245 1_4:+3790223 None:intergenic
GAAGTATGTCTTAGAAATCT+TGG 0.340115 1_4:-3790364 Msa0144330:CDS
CAAAACTCAACTTTAACATT+TGG 0.341966 1_4:-3790469 Msa0144330:CDS
GAATCCAAGCTTGCTGCTAC+TGG 0.348004 1_4:-3791156 Msa0144330:CDS
ATACAGGCTTTGGCTGGTTC+TGG 0.349018 1_4:-3791123 Msa0144330:CDS
GATGACTCTAACTCTGATAA+AGG 0.352635 1_4:-3789776 Msa0144330:three_prime_UTR
AAATGTTGCAAGTCATTTGC+AGG 0.369685 1_4:-3792480 Msa0144330:intron
GATGAGTCATCATCAGTATA+TGG 0.370458 1_4:-3790904 Msa0144330:CDS
AGAGGATATTTGAGGAGAAA+TGG 0.372882 1_4:+3790531 None:intergenic
TGGAAGAACTAAGGAATATA+TGG 0.378920 1_4:-3792985 Msa0144330:CDS
GTAGGCATTATGTTAGTTGC+CGG 0.379535 1_4:+3791048 None:intergenic
GACAACACTTCTTCTGTTGC+TGG 0.380394 1_4:-3792863 Msa0144330:CDS
CTTTGAAAATTCTGCGAGAA+AGG 0.380677 1_4:-3793288 Msa0144330:CDS
GACCAGTTCTTACTAATAAC+AGG 0.381518 1_4:+3793172 None:intergenic
TTGAACTAATGGCTTCTTGC+CGG 0.385342 1_4:-3789640 Msa0144330:three_prime_UTR
TCAATCTTCTAATACCTTCC+AGG 0.399165 1_4:-3790692 Msa0144330:CDS
GATGGATAATTCTGTAGAAC+TGG 0.405841 1_4:+3790178 None:intergenic
TCGCTGGATTTAATATCATA+TGG 0.407074 1_4:+3790397 None:intergenic
CGAGGCTTCTTAGATGTAGA+TGG 0.408023 1_4:+3792761 None:intergenic
AGAACTGGGTGGCTCGCATT+TGG 0.408581 1_4:+3790193 None:intergenic
AATCTTGGATTTGTTGGAAA+AGG 0.408723 1_4:-3790349 Msa0144330:CDS
GTGGAAACAATATGTACCTT+TGG 0.409451 1_4:+3789867 None:intergenic
GCTGATGCTGGTGCCGTTGT+TGG 0.410400 1_4:+3790791 None:intergenic
CAATAGCTGCACATGTAACT+TGG 0.410478 1_4:-3789724 Msa0144330:three_prime_UTR
AGCTCCGGTGAGTTTCCGGC+TGG 0.413966 1_4:-3796284 Msa0144330:CDS
ATCAGAGTTAGAGTCATCAT+TGG 0.420176 1_4:+3789781 None:intergenic
TCTGTTGCTGGTGCAACAAA+AGG 0.420915 1_4:-3792851 Msa0144330:CDS
TGAACATGTTGGGTTGGAAA+TGG 0.424268 1_4:-3793200 Msa0144330:CDS
AATTCATAAACTAGTTTGTA+GGG 0.428890 1_4:-3789691 Msa0144330:three_prime_UTR
GGGATGTTAAACACAGTTCA+TGG 0.434178 1_4:-3791186 Msa0144330:CDS
ATAAACTCCTTGAACATGTT+GGG 0.438608 1_4:-3793210 Msa0144330:CDS
TAATTCATAAACTAGTTTGT+AGG 0.439580 1_4:-3789692 Msa0144330:three_prime_UTR
AGTTTATAGCCATCCATGTC+TGG 0.448144 1_4:+3793226 None:intergenic
TTTCCAACCCAACATGTTCA+AGG 0.451146 1_4:+3793203 None:intergenic
AGTTACATGTGCAGCTATTG+AGG 0.453181 1_4:+3789727 None:intergenic
GCATAGCTGCTTCTTCCGTA+GGG 0.453795 1_4:+3796327 None:intergenic
TGTTCAACCATCTTGCTTGG+TGG 0.455635 1_4:-3790722 Msa0144330:CDS
TGATTGACTATAATCAATAA+TGG 0.457615 1_4:+3790618 None:intergenic
AAGATATGACATACAGGCTT+TGG 0.459864 1_4:-3791133 Msa0144330:CDS
AAAAGATGAAGATGTTGAGT+TGG 0.460862 1_4:-3792795 Msa0144330:CDS
TCTTCCAGTAGCAGCAAGCT+TGG 0.461683 1_4:+3791152 None:intergenic
TCAGAGTTAGAGTCATCATT+GGG 0.472208 1_4:+3789782 None:intergenic
AATATGTACCTTTGGAGGTA+AGG 0.472769 1_4:+3789875 None:intergenic
CTTAGTTCTTCCATCCGTAC+AGG 0.475894 1_4:+3792995 None:intergenic
TCTCTTCGCTGTCATTATCA+AGG 0.476993 1_4:-3796203 Msa0144330:intron
TCTGAGTTAAAGAGAGAAGA+GGG 0.478441 1_4:+3796436 None:intergenic
AGGTTAGTATATATGAATGT+TGG 0.479087 1_4:-3789756 Msa0144330:three_prime_UTR
GGCATAGCTGCTTCTTCCGT+AGG 0.479883 1_4:+3796326 None:intergenic
ACTAATGCATGCATCTGTAC+AGG 0.484480 1_4:-3791010 Msa0144330:CDS
CAATGTTCAACCATCTTGCT+TGG 0.486283 1_4:-3790725 Msa0144330:CDS
TACTTCATCAAGTGAATCGC+TGG 0.487337 1_4:+3790381 None:intergenic
GGATATTTGAGGAGAAATGG+AGG 0.494211 1_4:+3790534 None:intergenic
TATAAACTCCTTGAACATGT+TGG 0.495307 1_4:-3793211 Msa0144330:CDS
CAGTGATGTCTGTTGATGAT+AGG 0.497216 1_4:-3793072 Msa0144330:CDS
GAAGAGCTGCAAGTGTTTCA+GGG 0.504164 1_4:+3791091 None:intergenic
CACAGTGAAGGAGGAGCCAA+AGG 0.506659 1_4:-3790239 Msa0144330:CDS
TATGACATACAGGCTTTGGC+TGG 0.508995 1_4:-3791129 Msa0144330:CDS
GTAGCTCTTGTGTCTCCGCC+AGG 0.509868 1_4:+3790556 None:intergenic
GTCTAAGTGTCAAGGGGAGA+AGG 0.513330 1_4:+3790425 None:intergenic
AATTTAGACTTTATTTGAAG+AGG 0.514433 1_4:-3791236 Msa0144330:CDS
TCGTTGCAGAGCACGAGCTC+CGG 0.520141 1_4:-3796299 Msa0144330:CDS
GCTGCACATGTAACTTGGAA+TGG 0.523756 1_4:-3789719 Msa0144330:three_prime_UTR
TCGAGTTCATCTCAATATCC+TGG 0.526488 1_4:-3790574 Msa0144330:CDS
ACTCCTTGAACATGTTGGGT+TGG 0.526711 1_4:-3793206 Msa0144330:CDS
AGTGTCAAGGGGAGAAGGCT+AGG 0.528820 1_4:+3790430 None:intergenic
GTGGTGGCGCATCAACAGAA+TGG 0.530597 1_4:-3791207 Msa0144330:CDS
CTCGTGCTCTGCAACGACGC+AGG 0.530779 1_4:+3796305 None:intergenic
TACTGGAAGATATGACATAC+AGG 0.531861 1_4:-3791139 Msa0144330:CDS
TAGGCATTATGTTAGTTGCC+GGG 0.533217 1_4:+3791049 None:intergenic
CTAATGCATGCATCTGTACA+GGG 0.539995 1_4:-3791009 Msa0144330:CDS
TTCAAGTATTCTCTTTGGCA+CGG 0.540957 1_4:+3792532 None:intergenic
AAGCAACACTATTTACTGCC+TGG 0.549477 1_4:+3790674 None:intergenic
TGGCCGCCGTCTAGTACACT+CGG 0.552222 1_4:-3790877 Msa0144330:CDS
GGCGGAGCTCTTAGGTCACC+CGG 0.553138 1_4:-3791067 Msa0144330:CDS
TAGGACAAGTACTGTCATGA+AGG 0.556092 1_4:-3793053 Msa0144330:CDS
AACACTATTTACTGCCTGGA+AGG 0.557646 1_4:+3790678 None:intergenic
GGAACTTGTCTAAGTGTCAA+GGG 0.557917 1_4:+3790418 None:intergenic
TTTGAAGAGGTTAAGTGTGG+TGG 0.558644 1_4:-3791223 Msa0144330:CDS
TCAATCTCAAGTGGAAGGTT+AGG 0.559134 1_4:-3790853 Msa0144330:CDS
TAACCCAGCCGGAAACTCAC+CGG 0.561846 1_4:+3796280 None:intergenic
GAAACAATATGTACCTTTGG+AGG 0.562969 1_4:+3789870 None:intergenic
ATCTGAGTTAAAGAGAGAAG+AGG 0.563869 1_4:+3796435 None:intergenic
AAATTATTGACGATGTCGAA+AGG 0.566946 1_4:+3790949 None:intergenic
ATATTACATAACTGCCCCTA+CGG 0.568709 1_4:-3796342 Msa0144330:five_prime_UTR
TGGAACTTGTCTAAGTGTCA+AGG 0.569185 1_4:+3790417 None:intergenic
CTGTACGGATGGAAGAACTA+AGG 0.571403 1_4:-3792994 Msa0144330:CDS
AGATAATGATCGCAATACAC+GGG 0.572667 1_4:-3792900 Msa0144330:CDS
ATGCATGCATTAGTGCAGTC+CGG 0.579695 1_4:+3791019 None:intergenic
AATTATTGACGATGTCGAAA+GGG 0.582045 1_4:+3790950 None:intergenic
ATATATGGCAGCATGTTGCT+AGG 0.583349 1_4:-3792970 Msa0144330:CDS
AAAATTCTGCGAGAAAGGAA+AGG 0.584113 1_4:-3793283 Msa0144330:CDS
TGGTGGCGCATCAACAGAAT+GGG 0.586758 1_4:-3791206 Msa0144330:CDS
AGTGCAGTCCGGTCCACTGT+AGG 0.587668 1_4:+3791030 None:intergenic
ACATAATGCCTACAGTGGAC+CGG 0.591447 1_4:-3791038 Msa0144330:CDS
TTATTTGAAGAGGTTAAGTG+TGG 0.592282 1_4:-3791226 Msa0144330:CDS
AAGATAATGATCGCAATACA+CGG 0.600067 1_4:-3792901 Msa0144330:CDS
AAAGTATTCATGGCTAGCAA+TGG 0.600983 1_4:-3790265 Msa0144330:CDS
ACAAGAACCCTTAACCCAGC+CGG 0.601519 1_4:+3796269 None:intergenic
CAATGGTAACACAGTGAAGG+AGG 0.603246 1_4:-3790248 Msa0144330:CDS
GTCAGTGCTGTAAATCAACT+AGG 0.604605 1_4:-3792704 Msa0144330:CDS
CTTGAAATGATGAATGTCCC+TGG 0.605781 1_4:-3792515 Msa0144330:CDS
AAGGTATTAGAAGATTGAGC+AGG 0.607200 1_4:+3790697 None:intergenic
TCATGAAGGGAATTAGACAC+GGG 0.611444 1_4:-3793039 Msa0144330:CDS
TAGTGTTGCTTCTGTCAACA+AGG 0.611545 1_4:-3790662 Msa0144330:CDS
AGAGAAGACCTTACCTCCAA+AGG 0.611795 1_4:-3789883 Msa0144330:three_prime_UTR
GGATGTTAAACACAGTTCAT+GGG 0.616102 1_4:-3791185 Msa0144330:CDS
GCTCCGGTGAGTTTCCGGCT+GGG 0.616703 1_4:-3796283 Msa0144330:CDS
TTTGGATATCTGATATGACT+CGG 0.618478 1_4:+3790211 None:intergenic
CATCATCAGTATATGGAGCA+TGG 0.620082 1_4:-3790897 Msa0144330:CDS
AACACTTGCAGCTCTTCAGG+CGG 0.620247 1_4:-3791085 Msa0144330:CDS
GCAGGAACCACCAAGCAAGA+TGG 0.620808 1_4:+3790715 None:intergenic
AGGACAAGTACTGTCATGAA+GGG 0.622788 1_4:-3793052 Msa0144330:CDS
GACGATGTCGAAAGGGCTGT+AGG 0.623972 1_4:+3790957 None:intergenic
GCACTTGAATGATCATGAGA+TGG 0.624506 1_4:+3790160 None:intergenic
GTCATGAAGGGAATTAGACA+CGG 0.627814 1_4:-3793040 Msa0144330:CDS
CAAGTGTTTCAGGGGAAACG+TGG 0.629851 1_4:+3791100 None:intergenic
CTAAGAAGCCTCGTGTAGTG+TGG 0.636384 1_4:-3792751 Msa0144330:CDS
AAGGGGAGAAGGCTAGGCAA+TGG 0.637218 1_4:+3790436 None:intergenic
TCGGGTCAATCTCAAGTGGA+AGG 0.637487 1_4:-3790858 Msa0144330:CDS
AAGAGCTGCAAGTGTTTCAG+GGG 0.639399 1_4:+3791092 None:intergenic
TAGCAATGGTAACACAGTGA+AGG 0.641107 1_4:-3790251 Msa0144330:CDS
AGTGAAGGAGGAGCCAAAGG+AGG 0.646617 1_4:-3790236 Msa0144330:CDS
GTTCATATGCCAGACATGGA+TGG 0.651624 1_4:-3793235 Msa0144330:CDS
ACACTCGGGTCAATCTCAAG+TGG 0.652626 1_4:-3790862 Msa0144330:CDS
ATATATTGCAGCACCAACAA+CGG 0.653116 1_4:-3790804 Msa0144330:CDS
CATAGCTGCTTCTTCCGTAG+GGG 0.654286 1_4:+3796328 None:intergenic
GAACTTGTCTAAGTGTCAAG+GGG 0.665309 1_4:+3790419 None:intergenic
GATAATGATCGCAATACACG+GGG 0.671509 1_4:-3792899 Msa0144330:CDS
GGCCGCCGTCTAGTACACTC+GGG 0.673948 1_4:-3790876 Msa0144330:CDS
TGATGTTCATATGCCAGACA+TGG 0.674601 1_4:-3793239 Msa0144330:CDS
CGTGCAGAATAGTAACACAC+TGG 0.679139 1_4:-3790830 Msa0144330:CDS
AGTTCTTACTAATAACAGGA+AGG 0.681007 1_4:+3793176 None:intergenic
TGCAGTCACTACATGCTCTG+AGG 0.686470 1_4:-3793320 Msa0144330:intron
TCTACTGACCACACTACACG+AGG 0.699174 1_4:+3792743 None:intergenic
GATAATTCTGTAGAACTGGG+TGG 0.703628 1_4:+3790182 None:intergenic
AACTAACATAATGCCTACAG+TGG 0.706212 1_4:-3791043 Msa0144330:CDS
TAATGCATGCATCTGTACAG+GGG 0.713759 1_4:-3791008 Msa0144330:CDS
ATGGATAATTCTGTAGAACT+GGG 0.722325 1_4:+3790179 None:intergenic
CATGAAGGGAATTAGACACG+GGG 0.726759 1_4:-3793038 Msa0144330:CDS
AGTTCATCTCAATATCCTGG+CGG 0.732197 1_4:-3790571 Msa0144330:CDS
GACCCGAGTGTACTAGACGG+CGG 0.735269 1_4:+3790874 None:intergenic
ATTGACCCGAGTGTACTAGA+CGG 0.751718 1_4:+3790871 None:intergenic
ATAATGATCGCAATACACGG+GGG 0.815289 1_4:-3792898 Msa0144330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTATTTAATCAGTAAA+TGG + chr1_4:3791376-3791395 None:intergenic 10.0%
!!! ATTAAATAATTATTTGTTGT+TGG - chr1_4:3791383-3791402 Msa0144330:intron 10.0%
!! ATAAATGAATAAACATTAAA+TGG + chr1_4:3791546-3791565 None:intergenic 10.0%
!! TTATTCATTTATTTATTTGA+AGG - chr1_4:3791554-3791573 Msa0144330:intron 10.0%
!! TATTCATTTATTTATTTGAA+GGG - chr1_4:3791555-3791574 Msa0144330:intron 10.0%
!! TCATCATAAATAAAAAATAA+TGG + chr1_4:3795893-3795912 None:intergenic 10.0%
!! TAAGGTTTAGTAATAAAAAA+GGG + chr1_4:3790934-3790953 None:intergenic 15.0%
!! AAATTTACCAAAATGTATAA+AGG + chr1_4:3791600-3791619 None:intergenic 15.0%
!!! ATTTTGGTAAATTTCTATTT+TGG - chr1_4:3791606-3791625 Msa0144330:intron 15.0%
!!! GAAAATTTTGAATGAAAATA+AGG - chr1_4:3793044-3793063 Msa0144330:CDS 15.0%
!! AATAGAAAGAAAAAAAAAGT+TGG + chr1_4:3793332-3793351 None:intergenic 15.0%
!! TTTATTAAATGCTAGATATA+CGG - chr1_4:3793706-3793725 Msa0144330:intron 15.0%
!!! TATTTTGGGTTTTAAATATT+AGG - chr1_4:3794231-3794250 Msa0144330:intron 15.0%
!! AACAGTATTTAAATTAGTAT+AGG + chr1_4:3794379-3794398 None:intergenic 15.0%
!! AATTAGATGTTAAGATTAAA+AGG - chr1_4:3794529-3794548 Msa0144330:intron 15.0%
!!! TCTTTGTTTATAATGTAAAA+TGG - chr1_4:3796396-3796415 Msa0144330:five_prime_UTR 15.0%
!! TAAAATGACACATATATAAC+AGG + chr1_4:3789918-3789937 None:intergenic 20.0%
!! TGAAACGTTAGATTAATAAA+AGG - chr1_4:3790089-3790108 Msa0144330:intron 20.0%
!! AGATTAATAAAAGGAAACAT+CGG - chr1_4:3790098-3790117 Msa0144330:intron 20.0%
!! CAACTATAGTAACTAAAAAA+GGG + chr1_4:3790307-3790326 None:intergenic 20.0%
!! ACAACTATAGTAACTAAAAA+AGG + chr1_4:3790308-3790327 None:intergenic 20.0%
!!! TTGATTTAAAGCAAAATTAC+AGG + chr1_4:3790613-3790632 None:intergenic 20.0%
!! AATTATTACTAAACCTTACT+TGG - chr1_4:3790750-3790769 Msa0144330:CDS 20.0%
!! GTAAGGTTTAGTAATAAAAA+AGG + chr1_4:3790935-3790954 None:intergenic 20.0%
!! AAGTTGAATGAAAATGTAAA+TGG + chr1_4:3791057-3791076 None:intergenic 20.0%
!! AACATAATATCAATCAAGAA+TGG - chr1_4:3791285-3791304 Msa0144330:intron 20.0%
!! GTAATCTAATTCATAAATGA+TGG + chr1_4:3791332-3791351 None:intergenic 20.0%
!!! TAATTATTTGTTGTTGGATT+TGG - chr1_4:3791389-3791408 Msa0144330:intron 20.0%
!!! TTTGGTTCCTATTAAAATTT+AGG - chr1_4:3791624-3791643 Msa0144330:intron 20.0%
!!! TACTTTTCTTTGTAAATCTA+TGG - chr1_4:3792008-3792027 Msa0144330:intron 20.0%
!! AATGACTGAAATAATTTAGA+GGG + chr1_4:3792141-3792160 None:intergenic 20.0%
!! TAATGACTGAAATAATTTAG+AGG + chr1_4:3792142-3792161 None:intergenic 20.0%
!!! ATTATTTTATTAAGCCTGTA+CGG - chr1_4:3792983-3793002 Msa0144330:CDS 20.0%
!! TAGTAAAAGAACAAAAAAAG+AGG - chr1_4:3793166-3793185 Msa0144330:intron 20.0%
!!! TATGTGCTATTTTTCATATT+TGG - chr1_4:3793665-3793684 Msa0144330:intron 20.0%
!! TCTAGCATTTAATAAAAGAA+AGG + chr1_4:3793702-3793721 None:intergenic 20.0%
!!! TCATGAAAATAGATTCTTTT+TGG + chr1_4:3794001-3794020 None:intergenic 20.0%
!! CAAAGTTGTTATGAAATAAA+AGG - chr1_4:3794104-3794123 Msa0144330:intron 20.0%
!!! TCTTTTTATTATTCCCATTT+TGG - chr1_4:3794164-3794183 Msa0144330:intron 20.0%
!! AACTTGAATCAAATCAATAA+CGG + chr1_4:3794354-3794373 None:intergenic 20.0%
!!! TATATATGTATGTTTTCGAA+CGG - chr1_4:3794603-3794622 Msa0144330:intron 20.0%
!!! AATTTAGACTTTATTTGAAG+AGG - chr1_4:3794756-3794775 Msa0144330:intron 20.0%
!! TGATTGACTATAATCAATAA+TGG + chr1_4:3795377-3795396 None:intergenic 20.0%
!!! TGGATTTTATTTTCAAAACT+TGG + chr1_4:3795679-3795698 None:intergenic 20.0%
!! GAAATAAGATAAACAGTTAA+CGG + chr1_4:3795991-3796010 None:intergenic 20.0%
!!! CTTATATGAAAATGTTTTTC+AGG - chr1_4:3796075-3796094 Msa0144330:intron 20.0%
!!! TAATTCATAAACTAGTTTGT+AGG - chr1_4:3796300-3796319 Msa0144330:CDS 20.0%
!!! AATTCATAAACTAGTTTGTA+GGG - chr1_4:3796301-3796320 Msa0144330:CDS 20.0%
! ACTAACTGAACGAAATTATT+TGG + chr1_4:3789832-3789851 None:intergenic 25.0%
!!! AGTCGTTTTTTTATTTTCCA+TGG - chr1_4:3789939-3789958 Msa0144330:intron 25.0%
! AGACAGTGAATTAACTTATA+AGG - chr1_4:3790046-3790065 Msa0144330:intron 25.0%
! TACATATAAAGAAACAAGTG+AGG - chr1_4:3790166-3790185 Msa0144330:CDS 25.0%
! ACTAAAGACATAAAAGCAAA+TGG + chr1_4:3791012-3791031 None:intergenic 25.0%
! TTAAATGACACTAAGAGTAA+AGG + chr1_4:3791104-3791123 None:intergenic 25.0%
! AACATAGAACAAAAGAATGA+AGG + chr1_4:3791185-3791204 None:intergenic 25.0%
! TCTTGATTGATATTATGTTG+AGG + chr1_4:3791284-3791303 None:intergenic 25.0%
!! TTCTTTGCCTTTATACATTT+TGG - chr1_4:3791590-3791609 Msa0144330:intron 25.0%
!!! AAGGAAGCCTAAATTTTAAT+AGG + chr1_4:3791634-3791653 None:intergenic 25.0%
! ATTAAAATTTAGGCTTCCTT+AGG - chr1_4:3791634-3791653 Msa0144330:intron 25.0%
! ATAGGGTAACATATACTATT+TGG + chr1_4:3791756-3791775 None:intergenic 25.0%
! TCTACCAATACTTAACATAA+GGG + chr1_4:3791840-3791859 None:intergenic 25.0%
! ATGACTGAAATAATTTAGAG+GGG + chr1_4:3792140-3792159 None:intergenic 25.0%
! TAATGCTTAATACTGAAAAC+TGG - chr1_4:3792880-3792899 Msa0144330:CDS 25.0%
! AATAAGGAACATGATAATTC+TGG - chr1_4:3793060-3793079 Msa0144330:CDS 25.0%
!! TTGTTATTCTTGTATTTCAG+AGG - chr1_4:3793437-3793456 Msa0144330:intron 25.0%
!! ATCATTTCAAGTATTCTCTT+TGG + chr1_4:3793468-3793487 None:intergenic 25.0%
! TGTACATCAAATAATGAAGA+TGG + chr1_4:3793585-3793604 None:intergenic 25.0%
! AAGAAGAAGAAAAAGACTAA+AGG + chr1_4:3793628-3793647 None:intergenic 25.0%
! ATTCAACAATTGGAACAAAA+AGG + chr1_4:3793772-3793791 None:intergenic 25.0%
!! TTTTGGTGAATATCTTATCA+AGG + chr1_4:3793984-3794003 None:intergenic 25.0%
!! TTTTATTATTCCCATTTTGG+AGG - chr1_4:3794167-3794186 Msa0144330:intron 25.0%
!! TTTATTATTCCCATTTTGGA+GGG - chr1_4:3794168-3794187 Msa0144330:intron 25.0%
! TTTAGATGAGAATCTCTATT+GGG - chr1_4:3794284-3794303 Msa0144330:intron 25.0%
!! ACTTTCTGTAATGATTTTTC+AGG + chr1_4:3794326-3794345 None:intergenic 25.0%
! CTGTTATAAATATACGACAT+TGG - chr1_4:3794394-3794413 Msa0144330:intron 25.0%
! TAAATATACGACATTGGTAA+AGG - chr1_4:3794400-3794419 Msa0144330:intron 25.0%
! AAATATACGACATTGGTAAA+GGG - chr1_4:3794401-3794420 Msa0144330:intron 25.0%
! ATTAAAAGGACAAAGATATG+TGG - chr1_4:3794543-3794562 Msa0144330:intron 25.0%
!! ATATATGTATGTTTTCGAAC+GGG - chr1_4:3794604-3794623 Msa0144330:intron 25.0%
! TTAACATTACCATTGTGAAT+TGG - chr1_4:3794729-3794748 Msa0144330:intron 25.0%
!!! CTGCTGAATATTGTTATTTA+TGG + chr1_4:3795500-3795519 None:intergenic 25.0%
! CAAAACTCAACTTTAACATT+TGG - chr1_4:3795523-3795542 Msa0144330:intron 25.0%
! TAAAATCATTTGCAGATGAT+TGG + chr1_4:3795699-3795718 None:intergenic 25.0%
!!! TAGTCAAATGAAAGTATTCA+TGG - chr1_4:3795717-3795736 Msa0144330:intron 25.0%
!! TTTATCTTATTTCTCTGCAT+AGG - chr1_4:3795998-3796017 Msa0144330:intron 25.0%
! TCATATAAGATACTGTTTGA+CGG + chr1_4:3796064-3796083 None:intergenic 25.0%
!!! ATATGAAAATGTTTTTCAGG+TGG - chr1_4:3796078-3796097 Msa0144330:intron 25.0%
!! GTTTTTCTAAACAACTAAAG+TGG + chr1_4:3796147-3796166 None:intergenic 25.0%
! AGGTTAGTATATATGAATGT+TGG - chr1_4:3796236-3796255 Msa0144330:CDS 25.0%
! ATTTCAACTGATTGAACTAA+TGG - chr1_4:3796341-3796360 Msa0144330:five_prime_UTR 25.0%
!! GAGTTTGATTTGAACTTAGA+AGG + chr1_4:3789596-3789615 None:intergenic 30.0%
! GAGTTTGACAACCTTATTTA+TGG - chr1_4:3790009-3790028 Msa0144330:intron 30.0%
TTAAGTGCTAATAGGAAAGA+AGG - chr1_4:3790123-3790142 Msa0144330:intron 30.0%
!! TGTTGATTCTCTTAGTGAAA+AGG - chr1_4:3790239-3790258 Msa0144330:CDS 30.0%
! GTTGATTCTCTTAGTGAAAA+GGG - chr1_4:3790240-3790259 Msa0144330:CDS 30.0%
AGTAACTAAAAAAGGGCAAA+GGG + chr1_4:3790472-3790491 None:intergenic 30.0%
TAGTAACTAAAAAAGGGCAA+AGG + chr1_4:3790473-3790492 None:intergenic 30.0%
CATATAATACACCAAATGGT+GGG - chr1_4:3790861-3790880 Msa0144330:CDS 30.0%
! AAGAATGCATGTTTGAAGTA+AGG + chr1_4:3790952-3790971 None:intergenic 30.0%
AAGCAAATGGCATTTGAATT+GGG + chr1_4:3790999-3791018 None:intergenic 30.0%
AAAGCAAATGGCATTTGAAT+TGG + chr1_4:3791000-3791019 None:intergenic 30.0%
TGGAAAAGAAGATAATTGCA+AGG + chr1_4:3791037-3791056 None:intergenic 30.0%
GTGAAGTCTAACAAGTTATA+AGG + chr1_4:3791354-3791373 None:intergenic 30.0%
AAGTTAACCATACTTGACTT+AGG - chr1_4:3791464-3791483 Msa0144330:intron 30.0%
GAATAAGAGAGTTGAATAAC+AGG - chr1_4:3791683-3791702 Msa0144330:intron 30.0%
ATCACCCTTATGTTAAGTAT+TGG - chr1_4:3791833-3791852 Msa0144330:intron 30.0%
CTCTACCAATACTTAACATA+AGG + chr1_4:3791841-3791860 None:intergenic 30.0%
TCACAAAAGTTGTCACAAAT+TGG + chr1_4:3791914-3791933 None:intergenic 30.0%
GGCTAAATATAGAAATCTAG+AGG + chr1_4:3792077-3792096 None:intergenic 30.0%
TGGAAATATCAAGTTTGCAA+TGG - chr1_4:3792241-3792260 Msa0144330:intron 30.0%
AAATATCAAGTTTGCAATGG+AGG - chr1_4:3792244-3792263 Msa0144330:intron 30.0%
!! AGGTTGATTTTGAATATCTG+TGG - chr1_4:3792264-3792283 Msa0144330:intron 30.0%
! TTGATTTTGAATATCTGTGG+TGG - chr1_4:3792267-3792286 Msa0144330:intron 30.0%
GCAATTGACTAACATAGATA+TGG - chr1_4:3792559-3792578 Msa0144330:intron 30.0%
TATAAACTCCTTGAACATGT+TGG - chr1_4:3792781-3792800 Msa0144330:CDS 30.0%
ATAAACTCCTTGAACATGTT+GGG - chr1_4:3792782-3792801 Msa0144330:CDS 30.0%
AGTTCTTACTAATAACAGGA+AGG + chr1_4:3792819-3792838 None:intergenic 30.0%
TTCCTGTTATTAGTAAGAAC+TGG - chr1_4:3792818-3792837 Msa0144330:CDS 30.0%
TTAATTCAACGAACAAGAAC+AGG + chr1_4:3792847-3792866 None:intergenic 30.0%
TGGAAGAACTAAGGAATATA+TGG - chr1_4:3793007-3793026 Msa0144330:CDS 30.0%
AAGATAATGATCGCAATACA+CGG - chr1_4:3793091-3793110 Msa0144330:intron 30.0%
AAAAGATGAAGATGTTGAGT+TGG - chr1_4:3793197-3793216 Msa0144330:CDS 30.0%
!! TTTGCTTTTGCATTCAATGA+CGG - chr1_4:3793355-3793374 Msa0144330:intron 30.0%
AAGCAAATGACTTCACAAAT+TGG + chr1_4:3793545-3793564 None:intergenic 30.0%
AATAATGAAGATGGTTCTCA+AGG + chr1_4:3793576-3793595 None:intergenic 30.0%
!! ATTTTTCATATTTGGCCTTC+AGG - chr1_4:3793673-3793692 Msa0144330:intron 30.0%
ATAAAAGAAAGGTAACCTGA+AGG + chr1_4:3793691-3793710 None:intergenic 30.0%
TTCCAATTGTTGAATGTTCT+GGG - chr1_4:3793777-3793796 Msa0144330:intron 30.0%
! TGATTTTTACCAGTCAAATC+AGG + chr1_4:3793830-3793849 None:intergenic 30.0%
AATCACATGAATCTGTTGTT+AGG - chr1_4:3793845-3793864 Msa0144330:intron 30.0%
AACAAGAGTAGATGTATCTA+TGG - chr1_4:3794047-3794066 Msa0144330:intron 30.0%
!! TTATTATTCCCATTTTGGAG+GGG - chr1_4:3794169-3794188 Msa0144330:intron 30.0%
AGGTTAAAACTAATGCTGTT+GGG - chr1_4:3794193-3794212 Msa0144330:intron 30.0%
!!! TTTCATGGTGGTGTTATTTT+GGG - chr1_4:3794217-3794236 Msa0144330:intron 30.0%
ATAGAGATTCTCATCTAAAC+TGG + chr1_4:3794283-3794302 None:intergenic 30.0%
GTTTAGATGAGAATCTCTAT+TGG - chr1_4:3794283-3794302 Msa0144330:intron 30.0%
AAATTTCTGCCAATTCACAA+TGG + chr1_4:3794741-3794760 None:intergenic 30.0%
TTATTTGAAGAGGTTAAGTG+TGG - chr1_4:3794766-3794785 Msa0144330:intron 30.0%
AATTATTGACGATGTCGAAA+GGG + chr1_4:3795045-3795064 None:intergenic 30.0%
AAATTATTGACGATGTCGAA+AGG + chr1_4:3795046-3795065 None:intergenic 30.0%
!! TGACTCATCTACTTTTAAGA+TGG + chr1_4:3795077-3795096 None:intergenic 30.0%
ACTGAAAAAGAGGATATTTG+AGG + chr1_4:3795472-3795491 None:intergenic 30.0%
!!! CAAATATCCTCTTTTTCAGT+AGG - chr1_4:3795472-3795491 Msa0144330:intron 30.0%
TCGCTGGATTTAATATCATA+TGG + chr1_4:3795598-3795617 None:intergenic 30.0%
GAAGTATGTCTTAGAAATCT+TGG - chr1_4:3795628-3795647 Msa0144330:intron 30.0%
CTTAGAAATCTTGGATTTGT+TGG - chr1_4:3795637-3795656 Msa0144330:intron 30.0%
!! AATCTTGGATTTGTTGGAAA+AGG - chr1_4:3795643-3795662 Msa0144330:intron 30.0%
! ATTTTCAAAACTTGGTATGC+AGG + chr1_4:3795671-3795690 None:intergenic 30.0%
TTTGGATATCTGATATGACT+CGG + chr1_4:3795784-3795803 None:intergenic 30.0%
ATGGATAATTCTGTAGAACT+GGG + chr1_4:3795816-3795835 None:intergenic 30.0%
TTCAAGTGCATTCACTTAAT+AGG - chr1_4:3795846-3795865 Msa0144330:intron 30.0%
! TAATATAAAGCGTCCATTCA+CGG + chr1_4:3795938-3795957 None:intergenic 30.0%
AATGGACGCTTTATATTAGT+TGG - chr1_4:3795940-3795959 Msa0144330:intron 30.0%
ATGGACGCTTTATATTAGTT+GGG - chr1_4:3795941-3795960 Msa0144330:intron 30.0%
CATATAAGATACTGTTTGAC+GGG + chr1_4:3796063-3796082 None:intergenic 30.0%
!!! AAATGTTTTTCAGGTGGAAA+TGG - chr1_4:3796084-3796103 Msa0144330:intron 30.0%
! CCCTATAAATACCAATTTTC+CGG + chr1_4:3796374-3796393 None:intergenic 30.0%
CCGGAAAATTGGTATTTATA+GGG - chr1_4:3796371-3796390 Msa0144330:five_prime_UTR 30.0%
TCTGAGTTAAAGAGAGAAGA+GGG + chr1_4:3789559-3789578 None:intergenic 35.0%
ATCTGAGTTAAAGAGAGAAG+AGG + chr1_4:3789560-3789579 None:intergenic 35.0%
ATATTACATAACTGCCCCTA+CGG - chr1_4:3789650-3789669 Msa0144330:three_prime_UTR 35.0%
!!! AGTGAGGTTTTAAATGAAGC+TGG - chr1_4:3790182-3790201 Msa0144330:CDS 35.0%
!!! AGGTTTTAAATGAAGCTGGT+GGG - chr1_4:3790186-3790205 Msa0144330:CDS 35.0%
!! TCACTTTTGGATTGATGTCT+TGG - chr1_4:3790281-3790300 Msa0144330:CDS 35.0%
! CACTTTTGGATTGATGTCTT+GGG - chr1_4:3790282-3790301 Msa0144330:CDS 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr1_4:3790374-3790393 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr1_4:3790373-3790392 Msa0144330:CDS 35.0%
CTGTCATCATGTCACATATA+TGG + chr1_4:3790533-3790552 None:intergenic 35.0%
TATGTGACATGATGACAGAT+AGG - chr1_4:3790535-3790554 Msa0144330:CDS 35.0%
TGATGACAGATAGGTAGAAA+TGG - chr1_4:3790544-3790563 Msa0144330:CDS 35.0%
GAATGATGCAAATGAGAAAG+TGG + chr1_4:3790716-3790735 None:intergenic 35.0%
!! TTACACAAGAGGTTGTTTCT+AGG + chr1_4:3790825-3790844 None:intergenic 35.0%
ACAACCTCTTGTGTAAAAAC+AGG - chr1_4:3790829-3790848 Msa0144330:CDS 35.0%
CAACCTCTTGTGTAAAAACA+GGG - chr1_4:3790830-3790849 Msa0144330:CDS 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr1_4:3790374-3790393 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr1_4:3790373-3790392 Msa0144330:CDS 35.0%
GCTGCATATAATACACCAAA+TGG - chr1_4:3790857-3790876 Msa0144330:CDS 35.0%
GCATATAATACACCAAATGG+TGG - chr1_4:3790860-3790879 Msa0144330:CDS 35.0%
AAATGGCATTTGAATTGGGA+TGG + chr1_4:3790995-3791014 None:intergenic 35.0%
TTCTGTGCATGTTTACACAT+TGG - chr1_4:3791203-3791222 Msa0144330:CDS 35.0%
CGAATTGAAAAAACGCAAAC+AGG + chr1_4:3791244-3791263 None:intergenic 35.0%
GTCTCATTAAACCGAAATCA+CGG - chr1_4:3791417-3791436 Msa0144330:intron 35.0%
TTAACCATACTTGACTTAGG+AGG - chr1_4:3791467-3791486 Msa0144330:intron 35.0%
AAAATTTAGGCTTCCTTAGG+TGG - chr1_4:3791637-3791656 Msa0144330:intron 35.0%
TAAGAGAGTTGAATAACAGG+AGG - chr1_4:3791686-3791705 Msa0144330:intron 35.0%
GGGTAACATATACTATTTGG+TGG + chr1_4:3791753-3791772 None:intergenic 35.0%
GTTACCCTATCTTATGTTAG+AGG - chr1_4:3791766-3791785 Msa0144330:intron 35.0%
TCTGCCTCTAACATAAGATA+GGG + chr1_4:3791773-3791792 None:intergenic 35.0%
ATCTGCCTCTAACATAAGAT+AGG + chr1_4:3791774-3791793 None:intergenic 35.0%
TTTCTGTCTCTCTATTGCTT+TGG - chr1_4:3791969-3791988 Msa0144330:intron 35.0%
CCATTTGCTTGACAACTTAT+GGG + chr1_4:3792038-3792057 None:intergenic 35.0%
!! CGGTTTTGTAAAGATGAGTT+GGG + chr1_4:3792098-3792117 None:intergenic 35.0%
CCAACTCATCTTTACAAAAC+CGG - chr1_4:3792096-3792115 Msa0144330:intron 35.0%
! ATTTTGAATATCTGTGGTGG+TGG - chr1_4:3792270-3792289 Msa0144330:intron 35.0%
GTCCTAAGTGGCAATTAAAA+TGG - chr1_4:3792296-3792315 Msa0144330:intron 35.0%
!!! CACCATTTTAATTGCCACTT+AGG + chr1_4:3792301-3792320 None:intergenic 35.0%
CTAAGTGGCAATTAAAATGG+TGG - chr1_4:3792299-3792318 Msa0144330:intron 35.0%
! GTGGTGATGACAATTATAGA+GGG - chr1_4:3792355-3792374 Msa0144330:intron 35.0%
!! TATTGAGCAATGATAGTGGA+AGG - chr1_4:3792378-3792397 Msa0144330:intron 35.0%
TCATTGGTAAGGGTGAAAAA+GGG - chr1_4:3792482-3792501 Msa0144330:CDS 35.0%
! CTTTGAAAATTCTGCGAGAA+AGG - chr1_4:3792704-3792723 Msa0144330:CDS 35.0%
AAAATTCTGCGAGAAAGGAA+AGG - chr1_4:3792709-3792728 Msa0144330:CDS 35.0%
GACCAGTTCTTACTAATAAC+AGG + chr1_4:3792823-3792842 None:intergenic 35.0%
AAAACTGGTTATGTTCTGCA+CGG - chr1_4:3792895-3792914 Msa0144330:CDS 35.0%
! TTTTATTAAGCCTGTACGGA+TGG - chr1_4:3792987-3793006 Msa0144330:CDS 35.0%
AGATAATGATCGCAATACAC+GGG - chr1_4:3793092-3793111 Msa0144330:intron 35.0%
TTCAAGTATTCTCTTTGGCA+CGG + chr1_4:3793463-3793482 None:intergenic 35.0%
! CATTTTCTCTTGTTAGACCA+GGG + chr1_4:3793497-3793516 None:intergenic 35.0%
! ACATTTTCTCTTGTTAGACC+AGG + chr1_4:3793498-3793517 None:intergenic 35.0%
AACGTATGAAATTCCCATCA+AGG + chr1_4:3793742-3793761 None:intergenic 35.0%
GTTCCAATTGTTGAATGTTC+TGG - chr1_4:3793776-3793795 Msa0144330:intron 35.0%
TACCCAGAACATTCAACAAT+TGG + chr1_4:3793782-3793801 None:intergenic 35.0%
CTTTACAAGAGTTACTAAGG+TGG + chr1_4:3793910-3793929 None:intergenic 35.0%
GCTCTTTACAAGAGTTACTA+AGG + chr1_4:3793913-3793932 None:intergenic 35.0%
TCAAAACTATCAGTGCAACA+TGG - chr1_4:3793938-3793957 Msa0144330:intron 35.0%
! ATGTTTTGTATGTCACAGAG+AGG - chr1_4:3794070-3794089 Msa0144330:intron 35.0%
! TGTTTTGTATGTCACAGAGA+GGG - chr1_4:3794071-3794090 Msa0144330:intron 35.0%
!! TATTATTCCCATTTTGGAGG+GGG - chr1_4:3794170-3794189 Msa0144330:intron 35.0%
GAGGTTAAAACTAATGCTGT+TGG - chr1_4:3794192-3794211 Msa0144330:intron 35.0%
GGTTAAAACTAATGCTGTTG+GGG - chr1_4:3794194-3794213 Msa0144330:intron 35.0%
!!! GTTTCATGGTGGTGTTATTT+TGG - chr1_4:3794216-3794235 Msa0144330:intron 35.0%
AGACTAGTGATGTATGAGAA+AGG - chr1_4:3794438-3794457 Msa0144330:intron 35.0%
AGTGATGTATGAGAAAGGTT+AGG - chr1_4:3794443-3794462 Msa0144330:intron 35.0%
GACAAGTTCTTTCTATCACT+TGG + chr1_4:3794492-3794511 None:intergenic 35.0%
! TGTTTTGTAGTGCTTTACTG+TGG - chr1_4:3794706-3794725 Msa0144330:intron 35.0%
GGATGTTAAACACAGTTCAT+GGG - chr1_4:3794807-3794826 Msa0144330:intron 35.0%
TACTGGAAGATATGACATAC+AGG - chr1_4:3794853-3794872 Msa0144330:intron 35.0%
AAGATATGACATACAGGCTT+TGG - chr1_4:3794859-3794878 Msa0144330:intron 35.0%
AACTAACATAATGCCTACAG+TGG - chr1_4:3794949-3794968 Msa0144330:intron 35.0%
!!! CTACTTTTAAGATGGACTGA+GGG + chr1_4:3795069-3795088 None:intergenic 35.0%
!!! TCTACTTTTAAGATGGACTG+AGG + chr1_4:3795070-3795089 None:intergenic 35.0%
GATGAGTCATCATCAGTATA+TGG - chr1_4:3795088-3795107 Msa0144330:intron 35.0%
ATATATTGCAGCACCAACAA+CGG - chr1_4:3795188-3795207 Msa0144330:intron 35.0%
! AAGGTATTAGAAGATTGAGC+AGG + chr1_4:3795298-3795317 None:intergenic 35.0%
TCAATCTTCTAATACCTTCC+AGG - chr1_4:3795300-3795319 Msa0144330:intron 35.0%
AGAGGATATTTGAGGAGAAA+TGG + chr1_4:3795464-3795483 None:intergenic 35.0%
TATGGATCCTACTGAAAAAG+AGG + chr1_4:3795482-3795501 None:intergenic 35.0%
! AAAGTATTCATGGCTAGCAA+TGG - chr1_4:3795727-3795746 Msa0144330:intron 35.0%
GATGGATAATTCTGTAGAAC+TGG + chr1_4:3795817-3795836 None:intergenic 35.0%
GTTACTATTTGATCCGTGAA+TGG - chr1_4:3795922-3795941 Msa0144330:intron 35.0%
TGGACGCTTTATATTAGTTG+GGG - chr1_4:3795942-3795961 Msa0144330:intron 35.0%
! AATATGTACCTTTGGAGGTA+AGG + chr1_4:3796120-3796139 None:intergenic 35.0%
GAAACAATATGTACCTTTGG+AGG + chr1_4:3796125-3796144 None:intergenic 35.0%
GTGGAAACAATATGTACCTT+TGG + chr1_4:3796128-3796147 None:intergenic 35.0%
TCAGAGTTAGAGTCATCATT+GGG + chr1_4:3796213-3796232 None:intergenic 35.0%
ATCAGAGTTAGAGTCATCAT+TGG + chr1_4:3796214-3796233 None:intergenic 35.0%
GATGACTCTAACTCTGATAA+AGG - chr1_4:3796216-3796235 Msa0144330:CDS 35.0%
GCCGGAAAATTGGTATTTAT+AGG - chr1_4:3796370-3796389 Msa0144330:five_prime_UTR 35.0%
! GAGAAGAGGGAGTACAAAAA+TGG + chr1_4:3789546-3789565 None:intergenic 40.0%
TCTCTTCGCTGTCATTATCA+AGG - chr1_4:3789789-3789808 Msa0144330:three_prime_UTR 40.0%
CTTCATCGTCGCCATAAATA+AGG + chr1_4:3790023-3790042 None:intergenic 40.0%
CATCGGCATTAAGTGCTAAT+AGG - chr1_4:3790115-3790134 Msa0144330:intron 40.0%
!!! GAGGTTTTAAATGAAGCTGG+TGG - chr1_4:3790185-3790204 Msa0144330:CDS 40.0%
TAGTGAAAAGGGCTATGTTG+AGG - chr1_4:3790251-3790270 Msa0144330:CDS 40.0%
! TTGAGGTTGAAGCTCACTTT+TGG - chr1_4:3790268-3790287 Msa0144330:CDS 40.0%
GTTGTTGACATGTGACTGTA+AGG - chr1_4:3790323-3790342 Msa0144330:CDS 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - chr1_4:3790367-3790386 Msa0144330:CDS 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - chr1_4:3790368-3790387 Msa0144330:CDS 40.0%
CGTACAATACACCAAATGGT+GGG - chr1_4:3790399-3790418 Msa0144330:CDS 40.0%
GAGATCAAGTACACCATCAT+TGG - chr1_4:3790580-3790599 Msa0144330:CDS 40.0%
TGCAAATGAGAAAGTGGCAA+TGG + chr1_4:3790710-3790729 None:intergenic 40.0%
TCATGTGACTGAAATGTCAC+AGG - chr1_4:3790792-3790811 Msa0144330:CDS 40.0%
! TGACTTGTGTACCGTGATTT+CGG + chr1_4:3791431-3791450 None:intergenic 40.0%
CCCATAAGTTGTCAAGCAAA+TGG - chr1_4:3792035-3792054 Msa0144330:intron 40.0%
GCCATTTGCTTGACAACTTA+TGG + chr1_4:3792039-3792058 None:intergenic 40.0%
!! CCGGTTTTGTAAAGATGAGT+TGG + chr1_4:3792099-3792118 None:intergenic 40.0%
!! CTTTACAAAACCGGCTTGTA+AGG - chr1_4:3792105-3792124 Msa0144330:intron 40.0%
! GAGACTTGAGCTTTTCCAAT+AGG - chr1_4:3792176-3792195 Msa0144330:intron 40.0%
TTGTAGCTGTCAACACCTAT+TGG + chr1_4:3792194-3792213 None:intergenic 40.0%
TTGACAGCTACAAACTGTGT+GGG - chr1_4:3792201-3792220 Msa0144330:intron 40.0%
AGTGGCAATTAAAATGGTGG+AGG - chr1_4:3792302-3792321 Msa0144330:intron 40.0%
! GTGGCAATTAAAATGGTGGA+GGG - chr1_4:3792303-3792322 Msa0144330:intron 40.0%
! GGTGGTGATGACAATTATAG+AGG - chr1_4:3792354-3792373 Msa0144330:intron 40.0%
!! AGGGTATTGAGCAATGATAG+TGG - chr1_4:3792374-3792393 Msa0144330:intron 40.0%
GTCATTGGTAAGGGTGAAAA+AGG - chr1_4:3792481-3792500 Msa0144330:CDS 40.0%
TGATGTTCATATGCCAGACA+TGG - chr1_4:3792753-3792772 Msa0144330:CDS 40.0%
AGTTTATAGCCATCCATGTC+TGG + chr1_4:3792769-3792788 None:intergenic 40.0%
TTTCCAACCCAACATGTTCA+AGG + chr1_4:3792792-3792811 None:intergenic 40.0%
!! TGAACATGTTGGGTTGGAAA+TGG - chr1_4:3792792-3792811 Msa0144330:CDS 40.0%
!! CAGTGATGTCTGTTGATGAT+AGG - chr1_4:3792920-3792939 Msa0144330:CDS 40.0%
! TAGGACAAGTACTGTCATGA+AGG - chr1_4:3792939-3792958 Msa0144330:CDS 40.0%
! AGGACAAGTACTGTCATGAA+GGG - chr1_4:3792940-3792959 Msa0144330:CDS 40.0%
GTCATGAAGGGAATTAGACA+CGG - chr1_4:3792952-3792971 Msa0144330:CDS 40.0%
TCATGAAGGGAATTAGACAC+GGG - chr1_4:3792953-3792972 Msa0144330:CDS 40.0%
ATATATGGCAGCATGTTGCT+AGG - chr1_4:3793022-3793041 Msa0144330:CDS 40.0%
GATAATGATCGCAATACACG+GGG - chr1_4:3793093-3793112 Msa0144330:intron 40.0%
ATAATGATCGCAATACACGG+GGG - chr1_4:3793094-3793113 Msa0144330:intron 40.0%
GTCAGTGCTGTAAATCAACT+AGG - chr1_4:3793288-3793307 Msa0144330:CDS 40.0%
! TTCAATGACGGAGACTTCTT+TGG - chr1_4:3793367-3793386 Msa0144330:intron 40.0%
CTTGAAATGATGAATGTCCC+TGG - chr1_4:3793477-3793496 Msa0144330:intron 40.0%
! ACGGTTTTCTACTACCTTGA+TGG - chr1_4:3793725-3793744 Msa0144330:intron 40.0%
! CGGTTTTCTACTACCTTGAT+GGG - chr1_4:3793726-3793745 Msa0144330:intron 40.0%
AAATGAACACTGCGTAGACT+TGG - chr1_4:3793803-3793822 Msa0144330:intron 40.0%
AATGAACACTGCGTAGACTT+GGG - chr1_4:3793804-3793823 Msa0144330:intron 40.0%
!!! TGCACTGATAGTTTTGACAC+AGG + chr1_4:3793935-3793954 None:intergenic 40.0%
AGAATCTCTATTGGGTCATG+CGG - chr1_4:3794292-3794311 Msa0144330:intron 40.0%
! TACATCACTAGTCTCATTCC+AGG + chr1_4:3794432-3794451 None:intergenic 40.0%
TTTGAAGAGGTTAAGTGTGG+TGG - chr1_4:3794769-3794788 Msa0144330:intron 40.0%
GGGATGTTAAACACAGTTCA+TGG - chr1_4:3794806-3794825 Msa0144330:intron 40.0%
TAGGCATTATGTTAGTTGCC+GGG + chr1_4:3794946-3794965 None:intergenic 40.0%
GTAGGCATTATGTTAGTTGC+CGG + chr1_4:3794947-3794966 None:intergenic 40.0%
ACTAATGCATGCATCTGTAC+AGG - chr1_4:3794982-3795001 Msa0144330:intron 40.0%
CTAATGCATGCATCTGTACA+GGG - chr1_4:3794983-3795002 Msa0144330:intron 40.0%
TAATGCATGCATCTGTACAG+GGG - chr1_4:3794984-3795003 Msa0144330:intron 40.0%
CATCATCAGTATATGGAGCA+TGG - chr1_4:3795095-3795114 Msa0144330:intron 40.0%
TCAATCTCAAGTGGAAGGTT+AGG - chr1_4:3795139-3795158 Msa0144330:intron 40.0%
CAATGTTCAACCATCTTGCT+TGG - chr1_4:3795267-3795286 Msa0144330:intron 40.0%
AACACTATTTACTGCCTGGA+AGG + chr1_4:3795317-3795336 None:intergenic 40.0%
AAGCAACACTATTTACTGCC+TGG + chr1_4:3795321-3795340 None:intergenic 40.0%
!! TAGTGTTGCTTCTGTCAACA+AGG - chr1_4:3795330-3795349 Msa0144330:intron 40.0%
! GTCAACAAGGATAGCAGTTT+TGG - chr1_4:3795343-3795362 Msa0144330:intron 40.0%
TCGAGTTCATCTCAATATCC+TGG - chr1_4:3795418-3795437 Msa0144330:intron 40.0%
AGTTCATCTCAATATCCTGG+CGG - chr1_4:3795421-3795440 Msa0144330:intron 40.0%
GGATATTTGAGGAGAAATGG+AGG + chr1_4:3795461-3795480 None:intergenic 40.0%
GAACTTGTCTAAGTGTCAAG+GGG + chr1_4:3795576-3795595 None:intergenic 40.0%
GGAACTTGTCTAAGTGTCAA+GGG + chr1_4:3795577-3795596 None:intergenic 40.0%
TGGAACTTGTCTAAGTGTCA+AGG + chr1_4:3795578-3795597 None:intergenic 40.0%
TACTTCATCAAGTGAATCGC+TGG + chr1_4:3795614-3795633 None:intergenic 40.0%
TAGCAATGGTAACACAGTGA+AGG - chr1_4:3795741-3795760 Msa0144330:intron 40.0%
GATAATTCTGTAGAACTGGG+TGG + chr1_4:3795813-3795832 None:intergenic 40.0%
GCACTTGAATGATCATGAGA+TGG + chr1_4:3795835-3795854 None:intergenic 40.0%
! TAAGATACTGTTTGACGGGT+AGG + chr1_4:3796059-3796078 None:intergenic 40.0%
AGTTACATGTGCAGCTATTG+AGG + chr1_4:3796268-3796287 None:intergenic 40.0%
CAATAGCTGCACATGTAACT+TGG - chr1_4:3796268-3796287 Msa0144330:CDS 40.0%
TTGAACTAATGGCTTCTTGC+CGG - chr1_4:3796352-3796371 Msa0144330:five_prime_UTR 40.0%
! TTAAATGAAGCTGGTGGGTG+AGG - chr1_4:3790191-3790210 Msa0144330:CDS 45.0%
GACATGTGACTGTAAGGTCA+CGG - chr1_4:3790329-3790348 Msa0144330:CDS 45.0%
ACATGTGACTGTAAGGTCAC+GGG - chr1_4:3790330-3790349 Msa0144330:CDS 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr1_4:3790363-3790382 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr1_4:3790395-3790414 Msa0144330:CDS 45.0%
GCGTACAATACACCAAATGG+TGG - chr1_4:3790398-3790417 Msa0144330:CDS 45.0%
GTTGTTGACATGCACGTTGA+AGG - chr1_4:3790495-3790514 Msa0144330:CDS 45.0%
TACAGGAAGTCGACCAATGA+TGG + chr1_4:3790596-3790615 None:intergenic 45.0%
GCAATGGAAAGCAGCAGTAA+AGG + chr1_4:3790694-3790713 None:intergenic 45.0%
CTAAACCTTACTTGGCGCAA+CGG - chr1_4:3790758-3790777 Msa0144330:CDS 45.0%
ACCATACTTGACTTAGGAGG+AGG - chr1_4:3791470-3791489 Msa0144330:intron 45.0%
CCATACTTGACTTAGGAGGA+GGG - chr1_4:3791471-3791490 Msa0144330:intron 45.0%
GACTTAGGAGGAGGGTTAAA+AGG - chr1_4:3791479-3791498 Msa0144330:intron 45.0%
TTAGGAGGAGGGTTAAAAGG+AGG - chr1_4:3791482-3791501 Msa0144330:intron 45.0%
TAGGAGGAGGGTTAAAAGGA+GGG - chr1_4:3791483-3791502 Msa0144330:intron 45.0%
TGTCATATCGTGTCCACCTA+AGG + chr1_4:3791653-3791672 None:intergenic 45.0%
!! AAAACCGGCTTGTAAGGTGA+AGG - chr1_4:3792111-3792130 Msa0144330:intron 45.0%
GTTGACAGCTACAAACTGTG+TGG - chr1_4:3792200-3792219 Msa0144330:intron 45.0%
TGACAGCTACAAACTGTGTG+GGG - chr1_4:3792202-3792221 Msa0144330:intron 45.0%
GGGGTGGTAGAAGTAATGTT+TGG - chr1_4:3792221-3792240 Msa0144330:intron 45.0%
!! TTGAATATCTGTGGTGGTGG+AGG - chr1_4:3792273-3792292 Msa0144330:intron 45.0%
!! TGAATATCTGTGGTGGTGGA+GGG - chr1_4:3792274-3792293 Msa0144330:intron 45.0%
CAGCAGTTGCAAATGATGCT+AGG - chr1_4:3792333-3792352 Msa0144330:intron 45.0%
CAGTTGCAAATGATGCTAGG+TGG - chr1_4:3792336-3792355 Msa0144330:intron 45.0%
!! CAATGATAGTGGAAGGTGTC+AGG - chr1_4:3792385-3792404 Msa0144330:intron 45.0%
! AGGGTAAAGGAAGAAAGCGT+GGG - chr1_4:3792459-3792478 Msa0144330:intron 45.0%
AAAGCGTGGGTCATTGGTAA+GGG - chr1_4:3792472-3792491 Msa0144330:intron 45.0%
GTTCATATGCCAGACATGGA+TGG - chr1_4:3792757-3792776 Msa0144330:CDS 45.0%
ACTCCTTGAACATGTTGGGT+TGG - chr1_4:3792786-3792805 Msa0144330:CDS 45.0%
CATGAAGGGAATTAGACACG+GGG - chr1_4:3792954-3792973 Msa0144330:CDS 45.0%
! CTTAGTTCTTCCATCCGTAC+AGG + chr1_4:3793000-3793019 None:intergenic 45.0%
CTGTACGGATGGAAGAACTA+AGG - chr1_4:3792998-3793017 Msa0144330:CDS 45.0%
GACAACACTTCTTCTGTTGC+TGG - chr1_4:3793129-3793148 Msa0144330:intron 45.0%
TCTGTTGCTGGTGCAACAAA+AGG - chr1_4:3793141-3793160 Msa0144330:intron 45.0%
CGAGGCTTCTTAGATGTAGA+TGG + chr1_4:3793234-3793253 None:intergenic 45.0%
AAGGTGGTAGCATGGATGAT+AGG + chr1_4:3793894-3793913 None:intergenic 45.0%
GAGTTACTAAGGTGGTAGCA+TGG + chr1_4:3793902-3793921 None:intergenic 45.0%
TTAACCTCCCCCTCCAAAAT+GGG + chr1_4:3794180-3794199 None:intergenic 45.0%
TTTAACCTCCCCCTCCAAAA+TGG + chr1_4:3794181-3794200 None:intergenic 45.0%
CTAATGCTGTTGGGGTTTCA+TGG - chr1_4:3794202-3794221 Msa0144330:intron 45.0%
!! CATTGGTAAAGGGAGTATCC+TGG - chr1_4:3794411-3794430 Msa0144330:intron 45.0%
! TATGACATACAGGCTTTGGC+TGG - chr1_4:3794863-3794882 Msa0144330:intron 45.0%
AAGAGCTGCAAGTGTTTCAG+GGG + chr1_4:3794903-3794922 None:intergenic 45.0%
GAAGAGCTGCAAGTGTTTCA+GGG + chr1_4:3794904-3794923 None:intergenic 45.0%
TGAAGAGCTGCAAGTGTTTC+AGG + chr1_4:3794905-3794924 None:intergenic 45.0%
TGAAACACTTGCAGCTCTTC+AGG - chr1_4:3794904-3794923 Msa0144330:intron 45.0%
ACATAATGCCTACAGTGGAC+CGG - chr1_4:3794954-3794973 Msa0144330:intron 45.0%
ATGCATGCATTAGTGCAGTC+CGG + chr1_4:3794976-3794995 None:intergenic 45.0%
ATTGACCCGAGTGTACTAGA+CGG + chr1_4:3795124-3795143 None:intergenic 45.0%
CGTGCAGAATAGTAACACAC+TGG - chr1_4:3795162-3795181 Msa0144330:intron 45.0%
!!! GCTGTTGTTTTTGCTGATGC+TGG + chr1_4:3795216-3795235 None:intergenic 45.0%
TGTTCAACCATCTTGCTTGG+TGG - chr1_4:3795270-3795289 Msa0144330:intron 45.0%
CAATGGTAACACAGTGAAGG+AGG - chr1_4:3795744-3795763 Msa0144330:intron 45.0%
!! ATATGACTCGGTTCCTCCTT+TGG + chr1_4:3795772-3795791 None:intergenic 45.0%
AGAGAAGACCTTACCTCCAA+AGG - chr1_4:3796109-3796128 Msa0144330:intron 45.0%
GCTGCACATGTAACTTGGAA+TGG - chr1_4:3796273-3796292 Msa0144330:CDS 45.0%
ATGGCTTCTTGCCGGAAAAT+TGG - chr1_4:3796360-3796379 Msa0144330:five_prime_UTR 45.0%
!!! TTATTTCTAATTTAATTTAA+TGG - chr1_4:3792526-3792545 Msa0144330:CDS 5.0%
CATAGCTGCTTCTTCCGTAG+GGG + chr1_4:3789667-3789686 None:intergenic 50.0%
GCATAGCTGCTTCTTCCGTA+GGG + chr1_4:3789668-3789687 None:intergenic 50.0%
TGAGTTTCCGGCTGGGTTAA+GGG - chr1_4:3789716-3789735 Msa0144330:three_prime_UTR 50.0%
ACAAGAACCCTTAACCCAGC+CGG + chr1_4:3789726-3789745 None:intergenic 50.0%
! TCGCGGATTGTAAGAGTCCA+TGG + chr1_4:3789959-3789978 None:intergenic 50.0%
AAAAAGGGCAAAGGGCAACC+CGG + chr1_4:3790464-3790483 None:intergenic 50.0%
TGACATGCACGTTGAAGGCA+AGG - chr1_4:3790500-3790519 Msa0144330:CDS 50.0%
CTTTACCGTTGCGCCAAGTA+AGG + chr1_4:3790766-3790785 None:intergenic 50.0%
TACTTGGCGCAACGGTAAAG+TGG - chr1_4:3790766-3790785 Msa0144330:CDS 50.0%
CCCTCCTCCTAAGTCAAGTA+TGG + chr1_4:3791474-3791493 None:intergenic 50.0%
TGGTAGAGCGTGATCAGTTG+TGG - chr1_4:3791853-3791872 Msa0144330:intron 50.0%
TAGAGCGTGATCAGTTGTGG+AGG - chr1_4:3791856-3791875 Msa0144330:intron 50.0%
GCATCCTTCACCTTACAAGC+CGG + chr1_4:3792118-3792137 None:intergenic 50.0%
!! TGATAGTGGAAGGTGTCAGG+CGG - chr1_4:3792388-3792407 Msa0144330:intron 50.0%
AGGTGATCTGAGAGGGTGAT+AGG - chr1_4:3792411-3792430 Msa0144330:intron 50.0%
TGATCTGAGAGGGTGATAGG+TGG - chr1_4:3792414-3792433 Msa0144330:intron 50.0%
ATAGGTGGCATATGTCGTCG+TGG - chr1_4:3792429-3792448 Msa0144330:intron 50.0%
TAGGTGGCATATGTCGTCGT+GGG - chr1_4:3792430-3792449 Msa0144330:intron 50.0%
GAGGGTAAAGGAAGAAAGCG+TGG - chr1_4:3792458-3792477 Msa0144330:intron 50.0%
! AGGAAGAAAGCGTGGGTCAT+TGG - chr1_4:3792466-3792485 Msa0144330:intron 50.0%
! GAAAGCGTGGGTCATTGGTA+AGG - chr1_4:3792471-3792490 Msa0144330:intron 50.0%
TGGTAGACCTAGTTCGTGTG+TGG - chr1_4:3792579-3792598 Msa0144330:intron 50.0%
AGACCTAGTTCGTGTGTGGA+TGG - chr1_4:3792583-3792602 Msa0144330:intron 50.0%
GACCTAGTTCGTGTGTGGAT+GGG - chr1_4:3792584-3792603 Msa0144330:intron 50.0%
AACCCATCCACACACGAACT+AGG + chr1_4:3792589-3792608 None:intergenic 50.0%
TCAGAGCATGTAGTGACTGC+AGG + chr1_4:3792673-3792692 None:intergenic 50.0%
TGCAGTCACTACATGCTCTG+AGG - chr1_4:3792672-3792691 Msa0144330:intron 50.0%
CTAAGAAGCCTCGTGTAGTG+TGG - chr1_4:3793241-3793260 Msa0144330:CDS 50.0%
TCTACTGACCACACTACACG+AGG + chr1_4:3793252-3793271 None:intergenic 50.0%
! AGACTTGGGCCTGATTTGAC+TGG - chr1_4:3793818-3793837 Msa0144330:intron 50.0%
!! TATTCCCATTTTGGAGGGGG+AGG - chr1_4:3794173-3794192 Msa0144330:intron 50.0%
ATGCTGTTGGGGTTTCATGG+TGG - chr1_4:3794205-3794224 Msa0144330:intron 50.0%
TCTCTATTGGGTCATGCGGA+AGG - chr1_4:3794296-3794315 Msa0144330:intron 50.0%
! TGGTGGCGCATCAACAGAAT+GGG - chr1_4:3794786-3794805 Msa0144330:intron 50.0%
!! GAATCCAAGCTTGCTGCTAC+TGG - chr1_4:3794836-3794855 Msa0144330:intron 50.0%
TCTTCCAGTAGCAGCAAGCT+TGG + chr1_4:3794843-3794862 None:intergenic 50.0%
! ATACAGGCTTTGGCTGGTTC+TGG - chr1_4:3794869-3794888 Msa0144330:intron 50.0%
CAAGTGTTTCAGGGGAAACG+TGG + chr1_4:3794895-3794914 None:intergenic 50.0%
AACACTTGCAGCTCTTCAGG+CGG - chr1_4:3794907-3794926 Msa0144330:intron 50.0%
ACACTCGGGTCAATCTCAAG+TGG - chr1_4:3795130-3795149 Msa0144330:intron 50.0%
TCGGGTCAATCTCAAGTGGA+AGG - chr1_4:3795134-3795153 Msa0144330:intron 50.0%
GTCTAAGTGTCAAGGGGAGA+AGG + chr1_4:3795570-3795589 None:intergenic 50.0%
! GATACTGTTTGACGGGTAGG+TGG + chr1_4:3796056-3796075 None:intergenic 50.0%
GGCATAGCTGCTTCTTCCGT+AGG + chr1_4:3789669-3789688 None:intergenic 55.0%
TAACCCAGCCGGAAACTCAC+CGG + chr1_4:3789715-3789734 None:intergenic 55.0%
GTGAGTTTCCGGCTGGGTTA+AGG - chr1_4:3789715-3789734 Msa0144330:three_prime_UTR 55.0%
GGACTCTTACAATCCGCGAG+TGG - chr1_4:3789960-3789979 Msa0144330:intron 55.0%
GAGTTCGTAGACTCCACTCG+CGG + chr1_4:3789976-3789995 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr1_4:3790342-3790361 Msa0144330:CDS 55.0%
ACAAAGCTCCCGCATACGCA+GGG + chr1_4:3790900-3790919 None:intergenic 55.0%
! ATGCGGGAGCTTTGTGCACA+TGG - chr1_4:3790905-3790924 Msa0144330:CDS 55.0%
CAGCTACAAACTGTGTGGGG+TGG - chr1_4:3792205-3792224 Msa0144330:intron 55.0%
AGGTGGCATATGTCGTCGTG+GGG - chr1_4:3792431-3792450 Msa0144330:intron 55.0%
! GTGGTGGCGCATCAACAGAA+TGG - chr1_4:3794785-3794804 Msa0144330:intron 55.0%
GACGATGTCGAAAGGGCTGT+AGG + chr1_4:3795038-3795057 None:intergenic 55.0%
GCAGGAACCACCAAGCAAGA+TGG + chr1_4:3795280-3795299 None:intergenic 55.0%
AAGGGGAGAAGGCTAGGCAA+TGG + chr1_4:3795559-3795578 None:intergenic 55.0%
AGTGTCAAGGGGAGAAGGCT+AGG + chr1_4:3795565-3795584 None:intergenic 55.0%
CACAGTGAAGGAGGAGCCAA+AGG - chr1_4:3795753-3795772 Msa0144330:intron 55.0%
AGTGAAGGAGGAGCCAAAGG+AGG - chr1_4:3795756-3795775 Msa0144330:intron 55.0%
AGAACTGGGTGGCTCGCATT+TGG + chr1_4:3795802-3795821 None:intergenic 55.0%
TCGTTGCAGAGCACGAGCTC+CGG - chr1_4:3789693-3789712 Msa0144330:three_prime_UTR 60.0%
CACGAGCTCCGGTGAGTTTC+CGG - chr1_4:3789704-3789723 Msa0144330:three_prime_UTR 60.0%
CTGAAGCTCCCGCATACGCA+GGG + chr1_4:3790437-3790456 None:intergenic 60.0%
ACTGAAGCTCCCGCATACGC+AGG + chr1_4:3790438-3790457 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG - chr1_4:3790442-3790461 Msa0144330:CDS 60.0%
TGGGAAGGGGTCCCACCATT+TGG + chr1_4:3790875-3790894 None:intergenic 60.0%
CATACGCAGGGTCTGGGAAG+GGG + chr1_4:3790888-3790907 None:intergenic 60.0%
GCATACGCAGGGTCTGGGAA+GGG + chr1_4:3790889-3790908 None:intergenic 60.0%
CTTCCCAGACCCTGCGTATG+CGG - chr1_4:3790888-3790907 Msa0144330:CDS 60.0%
TTCCCAGACCCTGCGTATGC+GGG - chr1_4:3790889-3790908 Msa0144330:CDS 60.0%
CACAAAGCTCCCGCATACGC+AGG + chr1_4:3790901-3790920 None:intergenic 60.0%
!! TGGTGGTGGAGGGTCCTAAG+TGG - chr1_4:3792284-3792303 Msa0144330:intron 60.0%
!! TAGTGGAAGGTGTCAGGCGG+AGG - chr1_4:3792391-3792410 Msa0144330:intron 60.0%
TCAGGCGGAGGTGATCTGAG+AGG - chr1_4:3792403-3792422 Msa0144330:intron 60.0%
CAGGCGGAGGTGATCTGAGA+GGG - chr1_4:3792404-3792423 Msa0144330:intron 60.0%
GGTGGCATATGTCGTCGTGG+GGG - chr1_4:3792432-3792451 Msa0144330:intron 60.0%
GCATATGTCGTCGTGGGGGA+GGG - chr1_4:3792436-3792455 Msa0144330:intron 60.0%
GCTCTTCAGGCGGAGCTCTT+AGG - chr1_4:3794917-3794936 Msa0144330:intron 60.0%
AGTGCAGTCCGGTCCACTGT+AGG + chr1_4:3794965-3794984 None:intergenic 60.0%
TGGCCGCCGTCTAGTACACT+CGG - chr1_4:3795115-3795134 Msa0144330:intron 60.0%
GACCCGAGTGTACTAGACGG+CGG + chr1_4:3795121-3795140 None:intergenic 60.0%
!! GCTGATGCTGGTGCCGTTGT+TGG + chr1_4:3795204-3795223 None:intergenic 60.0%
GTAGCTCTTGTGTCTCCGCC+AGG + chr1_4:3795439-3795458 None:intergenic 60.0%
CTCGTGCTCTGCAACGACGC+AGG + chr1_4:3789690-3789709 None:intergenic 65.0%
AGCTCCGGTGAGTTTCCGGC+TGG - chr1_4:3789708-3789727 Msa0144330:three_prime_UTR 65.0%
GCTCCGGTGAGTTTCCGGCT+GGG - chr1_4:3789709-3789728 Msa0144330:three_prime_UTR 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr1_4:3790413-3790432 None:intergenic 65.0%
GCATACGCAGGGTCGGGAAG+GGG + chr1_4:3790426-3790445 None:intergenic 65.0%
CGCATACGCAGGGTCGGGAA+GGG + chr1_4:3790427-3790446 None:intergenic 65.0%
CCTTCCCGACCCTGCGTATG+CGG - chr1_4:3790425-3790444 Msa0144330:CDS 65.0%
CTTCCCGACCCTGCGTATGC+GGG - chr1_4:3790426-3790445 Msa0144330:CDS 65.0%
AGCTCCCGCATACGCAGGGT+CGG + chr1_4:3790433-3790452 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG - chr1_4:3790443-3790462 Msa0144330:CDS 65.0%
CGCATACGCAGGGTCTGGGA+AGG + chr1_4:3790890-3790909 None:intergenic 65.0%
CTCCCGCATACGCAGGGTCT+GGG + chr1_4:3790894-3790913 None:intergenic 65.0%
GGCATATGTCGTCGTGGGGG+AGG - chr1_4:3792435-3792454 Msa0144330:intron 65.0%
TATGTCGTCGTGGGGGAGGG+AGG - chr1_4:3792439-3792458 Msa0144330:intron 65.0%
ATGTCGTCGTGGGGGAGGGA+GGG - chr1_4:3792440-3792459 Msa0144330:intron 65.0%
TCGTGGGGGAGGGAGGGTAA+AGG - chr1_4:3792446-3792465 Msa0144330:intron 65.0%
GGCGGAGCTCTTAGGTCACC+CGG - chr1_4:3794925-3794944 Msa0144330:intron 65.0%
GGCCGCCGTCTAGTACACTC+GGG - chr1_4:3795116-3795135 Msa0144330:intron 65.0%
CCGCATACGCAGGGTCGGGA+AGG + chr1_4:3790428-3790447 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+GGG + chr1_4:3790432-3790451 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+TGG + chr1_4:3790432-3790451 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 3789535 3796479 3789535 ID=Msa0144330;Name=Msa0144330
chr1_4 mRNA 3789535 3796479 3789535 ID=Msa0144330-mRNA-1;Parent=Msa0144330;Name=Msa0144330-mRNA-1;_AED=0.05;_eAED=0.05;_QI=149|1|1|1|0.8|0.66|6|386|620
chr1_4 exon 3789535 3789917 3789535 ID=Msa0144330-mRNA-1:exon:1583;Parent=Msa0144330-mRNA-1
chr1_4 exon 3790147 3791259 3790147 ID=Msa0144330-mRNA-1:exon:1582;Parent=Msa0144330-mRNA-1
chr1_4 exon 3792481 3792557 3792481 ID=Msa0144330-mRNA-1:exon:1581;Parent=Msa0144330-mRNA-1
chr1_4 exon 3792696 3793091 3792696 ID=Msa0144330-mRNA-1:exon:1580;Parent=Msa0144330-mRNA-1
chr1_4 exon 3793185 3793337 3793185 ID=Msa0144330-mRNA-1:exon:1579;Parent=Msa0144330-mRNA-1
chr1_4 exon 3796204 3796479 3796204 ID=Msa0144330-mRNA-1:exon:1578;Parent=Msa0144330-mRNA-1
chr1_4 five_prime_UTR 3796331 3796479 3796331 ID=Msa0144330-mRNA-1:five_prime_utr;Parent=Msa0144330-mRNA-1
chr1_4 CDS 3796204 3796330 3796204 ID=Msa0144330-mRNA-1:cds;Parent=Msa0144330-mRNA-1
chr1_4 CDS 3793185 3793337 3793185 ID=Msa0144330-mRNA-1:cds;Parent=Msa0144330-mRNA-1
chr1_4 CDS 3792696 3793091 3792696 ID=Msa0144330-mRNA-1:cds;Parent=Msa0144330-mRNA-1
chr1_4 CDS 3792481 3792557 3792481 ID=Msa0144330-mRNA-1:cds;Parent=Msa0144330-mRNA-1
chr1_4 CDS 3790150 3791259 3790150 ID=Msa0144330-mRNA-1:cds;Parent=Msa0144330-mRNA-1
chr1_4 three_prime_UTR 3790147 3790149 3790147 ID=Msa0144330-mRNA-1:three_prime_utr;Parent=Msa0144330-mRNA-1
chr1_4 three_prime_UTR 3789535 3789917 3789535 ID=Msa0144330-mRNA-1:three_prime_utr;Parent=Msa0144330-mRNA-1
Gene Sequence

>Msa0144330

ATGCCTGCGTCGTTGCAGAGCACGAGCTCCGGTGAGTTTCCGGCTGGGTTAAGGGTTCTTGTTGTTGATGATGACGTCACTACGTTGAAGATAATTGAACAAATGTCTCTTCGCTGTCATTATCAAGTCACTACATGCTCTGAGGCTACTGTTGCTTTGAAAATTCTGCGAGAAAGGAAAGGCTGTTTTGATGTTGTGCTGAGTGATGTTCATATGCCAGACATGGATGGCTATAAACTCCTTGAACATGTTGGGTTGGAAATGGACCTTCCTGTTATTATGATGTCTGTTGATGATAGGACAAGTACTGTCATGAAGGGAATTAGACACGGGGCTTGTGATTATTTTATTAAGCCTGTACGGATGGAAGAACTAAGGAATATATGGCAGCATGTTGCTAGGAAAATTTTGAATGAAAATAAGGAACATGATAATTCTGGCAGCATAGAAGATAATGATCGCAATACACGGGGGAATGATGATAATGACAACACTTCTTCTGTTGCTGGTGCAACAAAAGGAATAGTAAAAGAACAAAAAAAGAGGAGCAATTTAAAAGATGAAGATGTTGAGTTGGAGAATGACGATCCATCTACATCTAAGAAGCCTCGTGTAGTGTGGTCAGTAGAACTGCATCAACAATTTGTCAGTGCTGTAAATCAACTAGGACTTGACAAGGCCGTGCCAAAGAGAATACTTGAAATGATGAATGTCCCTGGTCTAACAAGAGAAAATGTTGCAAGTCATTTGCAGAAATTTAGACTTTATTTGAAGAGGTTAAGTGTGGTGGCGCATCAACAGAATGGGATGTTAAACACAGTTCATGGGACTATAGAATCCAAGCTTGCTGCTACTGGAAGATATGACATACAGGCTTTGGCTGGTTCTGGCCACGTTTCCCCTGAAACACTTGCAGCTCTTCAGGCGGAGCTCTTAGGTCACCCGGCAACTAACATAATGCCTACAGTGGACCGGACTGCACTAATGCATGCATCTGTACAGGGGACAAAACATTCTCGTGCTGATGATCATGCCTACAGCCCTTTCGACATCGTCAATAATTTCCCTCAGTCCATCTTAAAAGTAGATGAGTCATCATCAGTATATGGAGCATGGCCGCCGTCTAGTACACTCGGGTCAATCTCAAGTGGAAGGTTAGGCGTGCAGAATAGTAACACACTGGTTGATATATTGCAGCACCAACAACGGCACCAGCATCAGCAAAAACAACAGCAGTCTCAGATGCATGATCAAAATCGATCAATCAATGTTCAACCATCTTGCTTGGTGGTTCCTGCTCAATCTTCTAATACCTTCCAGGCAGTAAATAGTGTTGCTTCTGTCAACAAGGATAGCAGTTTTGGCAGAAATGCCATTATTGATTATAGTCAATCATCACAAAAATCAAATACTTCATCGAGTTCATCTCAATATCCTGGCGGAGACACAAGAGCTACCTCCATTTCTCCTCAAATATCCTCTTTTTCAGTAGGATCCATAAATAACAATATTCAGCAGATTCAAAACTCAACTTTAACATTTGGTGCTGCTAGACCATTGCCTAGCCTTCTCCCCTTGACACTTAGACAAGTTCCATATGATATTAAATCCAGCGATTCACTTGATGAAGTATGTCTTAGAAATCTTGGATTTGTTGGAAAAGGTACCTGCATACCAAGTTTTGAAAATAAAATCCAATCATCTGCAAATGATTTTAGTCAAATGAAAGTATTCATGGCTAGCAATGGTAACACAGTGAAGGAGGAGCCAAAGGAGGAACCGAGTCATATCAGATATCCAAATGCGAGCCACCCAGTTCTACAGAATTATCCATCTCATGATCATTCAAGTGCATTCACTTAA
Protein sequence

>Msa0144330

MPASLQSTSSGEFPAGLRVLVVDDDVTTLKIIEQMSLRCHYQVTTCSEATVALKILRERKGCFDVVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSVDDRTSTVMKGIRHGACDYFIKPVRMEELRNIWQHVARKILNENKEHDNSGSIEDNDRNTRGNDDNDNTSSVAGATKGIVKEQKKRSNLKDEDVELENDDPSTSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILEMMNVPGLTRENVASHLQKFRLYLKRLSVVAHQQNGMLNTVHGTIESKLAATGRYDIQALAGSGHVSPETLAALQAELLGHPATNIMPTVDRTALMHASVQGTKHSRADDHAYSPFDIVNNFPQSILKVDESSSVYGAWPPSSTLGSISSGRLGVQNSNTLVDILQHQQRHQHQQKQQQSQMHDQNRSINVQPSCLVVPAQSSNTFQAVNSVASVNKDSSFGRNAIIDYSQSSQKSNTSSSSSQYPGGDTRATSISPQISSFSVGSINNNIQQIQNSTLTFGAARPLPSLLPLTLRQVPYDIKSSDSLDEVCLRNLGFVGKGTCIPSFENKIQSSANDFSQMKVFMASNGNTVKEEPKEEPSHIRYPNASHPVLQNYPSHDHSSAFT*