AlfalfaGEDB | Msa0131260

M. sativa cultivar zhongmu-4 / Msa0131260

KEGG: K06688
GO: GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007088 GO:0007346 GO:0008150 GO:0008152 GO:0008283 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0010564 GO:0010965 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0030071 GO:0030163 GO:0031145 GO:0031625 GO:0032446 GO:0033043 GO:0033044 GO:0033045 GO:0033047 GO:0036211 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0051603 GO:0051726 GO:0051783 GO:0051983 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901987 GO:1901990 GO:1902099 GO:1905818
PFAM: PF00179.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0131260	sp\|Q54XS6\|UBE2C_DICDI	56.250	128	43	1	42	156	19	146	8.23e-49	157

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0131260	G7I9J7	84.896	192	3	2	1	166	1	192	8.77e-111	322

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0069200	Msa0131260	0.812103	5.017228e-51	-8.615850e-47
Msa0131260	Msa0177200	0.820189	7.824200e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0131260	MtrunA17_Chr1g0199951	84.896	192	3	2	1	166	1	192	1.69e-114	322
Msa0131260	MtrunA17_Chr4g0038891	53.086	162	51	2	27	163	18	179	2.61e-52	164
Msa0131260	MtrunA17_Chr5g0396451	50.299	167	58	2	15	156	6	172	2.79e-51	162
Msa0131260	MtrunA17_Chr4g0060351	39.669	121	59	2	48	154	23	143	1.49e-22	87.8
Msa0131260	MtrunA17_Chr8g0362321	38.843	121	60	2	48	154	23	143	3.06e-22	87.0
Msa0131260	MtrunA17_Chr1g0154011	39.316	117	57	2	47	149	19	135	8.55e-22	85.9
Msa0131260	MtrunA17_Chr3g0108261	40.741	108	51	1	49	143	21	128	4.46e-21	84.0
Msa0131260	MtrunA17_Chr5g0432831	40.741	108	51	1	49	143	21	128	4.61e-21	84.0
Msa0131260	MtrunA17_Chr4g0037011	41.905	105	48	1	50	141	22	126	5.13e-21	84.0
Msa0131260	MtrunA17_Chr7g0275361	39.815	108	52	1	49	143	21	128	1.60e-20	82.4
Msa0131260	MtrunA17_Chr2g0316201	40.179	112	54	1	48	146	24	135	1.14e-19	80.5
Msa0131260	MtrunA17_Chr2g0316211	39.286	112	55	1	48	146	24	135	3.04e-19	79.3
Msa0131260	MtrunA17_Chr8g0378601	43.011	93	40	1	50	129	43	135	4.82e-19	79.3
Msa0131260	MtrunA17_Chr8g0369311	37.391	115	58	2	49	149	77	191	1.02e-18	79.3
Msa0131260	MtrunA17_Chr3g0131871	32.500	120	65	2	48	153	22	139	7.40e-18	76.6
Msa0131260	MtrunA17_Chr2g0328001	35.156	128	56	2	54	154	30	157	3.59e-17	74.3
Msa0131260	MtrunA17_Chr4g0031181	33.594	128	58	2	54	154	30	157	5.78e-17	73.9
Msa0131260	MtrunA17_Chr3g0139901	32.432	111	61	1	45	141	21	131	1.50e-15	69.7
Msa0131260	MtrunA17_Chr5g0401831	34.167	120	62	3	53	155	32	151	1.79e-14	67.0
Msa0131260	MtrunA17_Chr4g0053191	33.913	115	60	2	57	155	37	151	8.58e-14	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0131260	AT3G20060.2	58.594	128	40	1	42	156	4	131	1.48e-49	156
Msa0131260	AT3G20060.1	58.594	128	40	1	42	156	49	176	2.20e-49	157
Msa0131260	AT1G50490.1	58.678	121	37	1	49	156	55	175	7.36e-47	151
Msa0131260	AT1G14400.1	40.000	120	58	2	48	153	23	142	1.35e-22	88.2
Msa0131260	AT1G14400.2	40.000	120	58	2	48	153	23	142	1.35e-22	88.2
Msa0131260	AT2G16740.1	40.336	119	57	2	47	151	19	137	1.48e-22	88.2
Msa0131260	AT2G02760.1	39.669	121	59	2	48	154	23	143	1.68e-22	88.2
Msa0131260	AT2G02760.2	39.669	121	59	2	48	154	23	143	1.68e-22	88.2
Msa0131260	AT2G02760.4	39.669	121	59	2	48	154	23	143	1.68e-22	88.2
Msa0131260	AT2G02760.3	39.669	121	59	2	48	154	23	143	1.68e-22	88.2
Msa0131260	AT5G62540.1	40.000	120	58	2	47	152	22	141	1.57e-21	85.5
Msa0131260	AT4G27960.1	37.500	128	63	2	49	159	21	148	5.59e-21	84.0
Msa0131260	AT1G64230.2	40.187	107	51	1	50	143	22	128	1.25e-20	83.2
Msa0131260	AT1G64230.1	40.187	107	51	1	50	143	22	128	1.25e-20	83.2
Msa0131260	AT5G53300.2	37.500	128	63	2	49	159	21	148	1.41e-20	83.2
Msa0131260	AT5G53300.4	37.500	128	63	2	49	159	21	148	1.41e-20	83.2
Msa0131260	AT5G53300.1	37.500	128	63	2	49	159	21	148	1.41e-20	83.2
Msa0131260	AT5G41700.5	40.187	107	51	1	49	142	21	127	2.23e-20	82.4
Msa0131260	AT5G41700.2	40.187	107	51	1	49	142	21	127	2.23e-20	82.4
Msa0131260	AT5G41700.1	40.187	107	51	1	49	142	21	127	2.23e-20	82.4
Msa0131260	AT5G56150.1	37.615	109	55	1	47	142	19	127	2.23e-20	82.4
Msa0131260	AT3G08690.2	40.187	107	51	1	49	142	21	127	4.28e-20	81.6
Msa0131260	AT3G08690.1	40.187	107	51	1	49	142	21	127	4.28e-20	81.6
Msa0131260	AT1G16890.2	41.071	112	53	1	48	146	24	135	5.38e-20	81.6
Msa0131260	AT5G41700.4	38.889	108	53	1	49	143	22	129	6.39e-20	81.3
Msa0131260	AT4G27960.2	37.795	127	62	2	50	159	52	178	6.82e-20	82.0
Msa0131260	AT1G16890.3	41.071	112	53	1	48	146	33	144	8.89e-20	81.3
Msa0131260	AT1G64230.3	39.423	104	50	1	53	143	34	137	8.99e-20	81.3
Msa0131260	AT1G78870.2	40.179	112	54	1	48	146	24	135	1.58e-19	80.5
Msa0131260	AT1G64230.5	39.252	107	52	1	49	142	63	169	1.59e-19	81.3
Msa0131260	AT1G64230.4	39.252	107	52	1	49	142	63	169	1.59e-19	81.3
Msa0131260	AT5G50870.1	35.780	109	56	1	48	142	22	130	4.68e-18	77.8
Msa0131260	AT5G50870.2	36.449	107	54	1	48	140	22	128	5.49e-18	77.8
Msa0131260	AT3G13550.1	38.739	111	54	2	50	146	57	167	1.12e-17	76.3
Msa0131260	AT3G08700.2	38.053	113	56	2	56	154	29	141	2.24e-17	74.7
Msa0131260	AT3G08700.1	38.053	113	56	2	56	154	29	141	2.24e-17	74.7
Msa0131260	AT5G59300.1	35.156	128	56	2	54	154	30	157	5.39e-17	74.3
Msa0131260	AT1G78870.4	42.105	95	42	1	65	146	8	102	6.24e-17	72.8
Msa0131260	AT1G16890.1	42.105	95	42	1	65	146	8	102	6.58e-17	72.8
Msa0131260	AT3G13550.2	40.217	92	42	1	50	128	57	148	2.13e-16	72.8
Msa0131260	AT1G36340.2	43.617	94	40	1	54	134	32	125	3.50e-16	71.6
Msa0131260	AT1G36340.1	43.617	94	40	1	54	134	32	125	3.50e-16	71.6
Msa0131260	AT5G25760.1	35.238	105	54	1	45	135	21	125	3.69e-16	71.6
Msa0131260	AT5G25760.2	35.238	105	54	1	45	135	21	125	3.69e-16	71.6
Msa0131260	AT3G46460.1	34.375	128	57	2	54	154	30	157	5.83e-16	71.6
Msa0131260	AT1G78870.1	41.667	96	42	2	65	146	8	103	1.73e-15	68.9
Msa0131260	AT3G55380.1	31.250	128	61	2	54	154	31	158	5.62e-15	68.9
Msa0131260	AT5G41700.3	49.123	57	29	0	49	105	21	77	3.00e-14	66.6
Msa0131260	AT5G53300.3	50.000	56	28	0	50	105	22	77	5.68e-14	64.7
Msa0131260	AT5G56150.2	44.068	59	33	0	47	105	19	77	6.49e-14	64.7
Msa0131260	AT1G78870.3	38.202	89	42	1	48	123	24	112	4.92e-12	59.7
Msa0131260	AT3G57870.1	32.174	115	62	2	57	155	38	152	1.33e-11	59.7

Find 51 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCACTTGGGGTGGTTTAAA+AGG	0.191154	1_3:+62003992	None:intergenic
AATTGTATAAATCAACTTTC+AGG	0.222701	1_3:+62003128	None:intergenic
GAAAATAATTGCTATTGCTT+TGG	0.294262	1_3:+62003105	None:intergenic
TTTAGAGGGCTCTCCAAGTT+AGG	0.344635	1_3:+62003496	None:intergenic
AGGAGAAGCGAGAGGCTTCT+TGG	0.357261	1_3:+62004828	None:intergenic
CGACTGGCCGCCGATTCAAC+AGG	0.365523	1_3:+62004868	None:intergenic
TCTGCAGCATAGTTGTTTAG+AGG	0.381020	1_3:+62003481	None:intergenic
AGAAAATTCCCCTGTTGAAT+CGG	0.394486	1_3:-62004878	Msa0131260:CDS
GGTGGTTTAAAAGGATAGTT+CGG	0.395297	1_3:+62004001	None:intergenic
ACAACTATGCTGCAGAGCTT+TGG	0.406851	1_3:-62003474	Msa0131260:CDS
ACATGGATTGGCACAATTCA+AGG	0.410583	1_3:-62004079	Msa0131260:CDS
GTGGTTTAAAAGGATAGTTC+GGG	0.414728	1_3:+62004002	None:intergenic
TCTGTCTATACAAAGTCTAT+TGG	0.417973	1_3:-62003600	Msa0131260:CDS
CTTCGGCGGTGGTGTTTGAT+CGG	0.437236	1_3:+62004899	None:intergenic
CAGATGAGTGGAGGAGATCT+TGG	0.446524	1_3:-62004136	Msa0131260:CDS
GGCACAATTCAAGGTGGAAA+AGG	0.458217	1_3:-62004070	Msa0131260:CDS
TCTAACAGCAGAGCCTAACT+TGG	0.460379	1_3:-62003509	Msa0131260:intron
TGGAAAAGGAACTCCTTATG+AGG	0.468163	1_3:-62004056	Msa0131260:CDS
GGATGATCGACGGTGGCGAC+TGG	0.470050	1_3:+62004852	None:intergenic
GGAGTATCTGCTTTCCCTGA+TGG	0.470606	1_3:-62004115	Msa0131260:CDS
GTCCACAAGCAGTATTTAGC+TGG	0.486859	1_3:-62003164	Msa0131260:CDS
ATAAATCAACTTTCAGGTGC+AGG	0.493849	1_3:+62003134	None:intergenic
TTATAAGATAAACCCTCATA+AGG	0.500118	1_3:+62004043	None:intergenic
TCATGCAGATTTCAAGAGAA+TGG	0.510290	1_3:-62003186	Msa0131260:intron
GTCTCAAATTTCACTTGGGG+TGG	0.517777	1_3:+62003983	None:intergenic
AGCTTCATGAATCATAATCA+TGG	0.518361	1_3:+62002886	None:intergenic
TGCAGAGCTTTGGAATGATA+AGG	0.522423	1_3:-62003464	Msa0131260:CDS
GAAACGGAAGTTGTGTCAGC+AGG	0.527352	1_3:+62004802	None:intergenic
GAAGTTGTGTCAGCAGGAAG+AGG	0.534120	1_3:+62004808	None:intergenic
CGTCGTCTCAAATTTCACTT+GGG	0.535928	1_3:+62003979	None:intergenic
ACGTCGTCTCAAATTTCACT+TGG	0.545034	1_3:+62003978	None:intergenic
CTGCAGCATAGTTGTTTAGA+GGG	0.556199	1_3:+62003482	None:intergenic
TGGTTTAAAAGGATAGTTCG+GGG	0.571786	1_3:+62004003	None:intergenic
CTCCAGCTAAATACTGCTTG+TGG	0.577463	1_3:+62003162	None:intergenic
AGAAGCGAGAGGCTTCTTGG+AGG	0.590943	1_3:+62004831	None:intergenic
TTGTGATTGTATAGGACAAG+TGG	0.591402	1_3:-62003652	Msa0131260:intron
GGAAAAGGAACTCCTTATGA+GGG	0.594287	1_3:-62004055	Msa0131260:CDS
GGTTTAAAAGGATAGTTCGG+GGG	0.602685	1_3:+62004004	None:intergenic
TCTATACAAAGTCTATTGGA+AGG	0.607196	1_3:-62003596	Msa0131260:intron
AAATTCCCCTGTTGAATCGG+CGG	0.617461	1_3:-62004875	Msa0131260:CDS
GACTGGCCGCCGATTCAACA+GGG	0.618918	1_3:+62004869	None:intergenic
GAGCTTTGGAATGATAAGGA+AGG	0.647349	1_3:-62003460	Msa0131260:intron
AGTCATCAGAAATCTTTCAG+AGG	0.649614	1_3:+62002978	None:intergenic
GCAGGAAGAGGAGAAGCGAG+AGG	0.663633	1_3:+62004820	None:intergenic
GCTTCTTGGAGGATGATCGA+CGG	0.669189	1_3:+62004842	None:intergenic
GTTTAAAAGGATAGTTCGGG+GGG	0.670883	1_3:+62004005	None:intergenic
GTCGTCTCAAATTTCACTTG+GGG	0.674521	1_3:+62003980	None:intergenic
ACTGGCCGCCGATTCAACAG+GGG	0.680091	1_3:+62004870	None:intergenic
TCTTGGAGGATGATCGACGG+TGG	0.707980	1_3:+62004845	None:intergenic
TGGATTGGCACAATTCAAGG+TGG	0.712983	1_3:-62004076	Msa0131260:CDS
AAATGTTTACAACAGAAGTG+CGG	0.720013	1_3:+62003083	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGAAATTTAGAAATATTTAA+GGG	+	chr1_3:62003039-62003058	None:intergenic	10.0%
!!	ATGAAATTTAGAAATATTTA+AGG	+	chr1_3:62003040-62003059	None:intergenic	10.0%
!!	GTATTCATATTAAATATAAT+TGG	+	chr1_3:62004080-62004099	None:intergenic	10.0%
!!	TGAAATTTAGAAATATTTAA+GGG	+	chr1_3:62003039-62003058	None:intergenic	10.0%
!!	ATGAAATTTAGAAATATTTA+AGG	+	chr1_3:62003040-62003059	None:intergenic	10.0%
!!	GTATTCATATTAAATATAAT+TGG	+	chr1_3:62004080-62004099	None:intergenic	10.0%
!!	AAATTTAGAAATATTTAAGG+GGG	+	chr1_3:62003037-62003056	None:intergenic	15.0%
!!	GAAATTTAGAAATATTTAAG+GGG	+	chr1_3:62003038-62003057	None:intergenic	15.0%
!!!	TTAAATTTTAAACTTTGATG+TGG	-	chr1_3:62003208-62003227	Msa0131260:intron	15.0%
!!!	CAGTCAATTTTTTTATTTTT+AGG	-	chr1_3:62003341-62003360	Msa0131260:intron	15.0%
!!	TCATTAAGAAACTAAATTTA+TGG	-	chr1_3:62003557-62003576	Msa0131260:intron	15.0%
!!	TGTAAAAAATATTGTTACAA+AGG	-	chr1_3:62004868-62004887	Msa0131260:CDS	15.0%
!!	AAATTTAGAAATATTTAAGG+GGG	+	chr1_3:62003037-62003056	None:intergenic	15.0%
!!	GAAATTTAGAAATATTTAAG+GGG	+	chr1_3:62003038-62003057	None:intergenic	15.0%
!!!	TTAAATTTTAAACTTTGATG+TGG	-	chr1_3:62003208-62003227	Msa0131260:intron	15.0%
!!!	CAGTCAATTTTTTTATTTTT+AGG	-	chr1_3:62003341-62003360	Msa0131260:intron	15.0%
!!	TCATTAAGAAACTAAATTTA+TGG	-	chr1_3:62003557-62003576	Msa0131260:intron	15.0%
!!	TGTAAAAAATATTGTTACAA+AGG	-	chr1_3:62004868-62004887	Msa0131260:CDS	15.0%
!!	AATTTAGAAATATTTAAGGG+GGG	+	chr1_3:62003036-62003055	None:intergenic	20.0%
!!	AAAAAAACTACATTAGAAGA+TGG	+	chr1_3:62003066-62003085	None:intergenic	20.0%
!!	TTAAAAAAATCACATAATCC+AGG	-	chr1_3:62003991-62004010	Msa0131260:CDS	20.0%
!!	TAAAAAAATCACATAATCCA+GGG	-	chr1_3:62003992-62004011	Msa0131260:CDS	20.0%
!!	TCATCTACATATTTAATACT+AGG	+	chr1_3:62004102-62004121	None:intergenic	20.0%
!!	AGATCAATTGAACTAAAATT+TGG	+	chr1_3:62004452-62004471	None:intergenic	20.0%
!!	AATTGTATAAATCAACTTTC+AGG	+	chr1_3:62004670-62004689	None:intergenic	20.0%
!!!	CAATATTTTTTACAAGAGAA+TGG	+	chr1_3:62004862-62004881	None:intergenic	20.0%
!!	AATTTAGAAATATTTAAGGG+GGG	+	chr1_3:62003036-62003055	None:intergenic	20.0%
!!	AAAAAAACTACATTAGAAGA+TGG	+	chr1_3:62003066-62003085	None:intergenic	20.0%
!!	TTAAAAAAATCACATAATCC+AGG	-	chr1_3:62003991-62004010	Msa0131260:CDS	20.0%
!!	TAAAAAAATCACATAATCCA+GGG	-	chr1_3:62003992-62004011	Msa0131260:CDS	20.0%
!!	TCATCTACATATTTAATACT+AGG	+	chr1_3:62004102-62004121	None:intergenic	20.0%
!!	AGATCAATTGAACTAAAATT+TGG	+	chr1_3:62004452-62004471	None:intergenic	20.0%
!!	AATTGTATAAATCAACTTTC+AGG	+	chr1_3:62004670-62004689	None:intergenic	20.0%
!!!	CAATATTTTTTACAAGAGAA+TGG	+	chr1_3:62004862-62004881	None:intergenic	20.0%
!!!	TTTTTAGTCTTGATCAGTTT+TGG	-	chr1_3:62003082-62003101	Msa0131260:three_prime_UTR	25.0%
!	ATCAAATTTCATTTCATGCA+TGG	+	chr1_3:62003158-62003177	None:intergenic	25.0%
!	ACACCATAAATTTGACAATA+AGG	+	chr1_3:62003367-62003386	None:intergenic	25.0%
!	ATTGTCAAATTTATGGTGTT+TGG	-	chr1_3:62003368-62003387	Msa0131260:intron	25.0%
!	GTACTTTACTTCTTCATATT+AGG	-	chr1_3:62003491-62003510	Msa0131260:CDS	25.0%
!	TTTACTTCTTCATATTAGGT+TGG	-	chr1_3:62003495-62003514	Msa0131260:CDS	25.0%
!	TTACTTCTTCATATTAGGTT+GGG	-	chr1_3:62003496-62003515	Msa0131260:CDS	25.0%
!	AATCATGTGAAATATGTTGT+TGG	-	chr1_3:62003520-62003539	Msa0131260:intron	25.0%
!	ATCATGTGAAATATGTTGTT+GGG	-	chr1_3:62003521-62003540	Msa0131260:intron	25.0%
!	AGTTTCTTAATGATACAAGA+AGG	+	chr1_3:62003550-62003569	None:intergenic	25.0%
!	TAAAAATATTCTCACCATCA+GGG	+	chr1_3:62003697-62003716	None:intergenic	25.0%
!!!	ATGGTGAGAATATTTTTACA+TGG	-	chr1_3:62003699-62003718	Msa0131260:intron	25.0%
!!!	GAGAATATTTTTACATGGAT+TGG	-	chr1_3:62003704-62003723	Msa0131260:intron	25.0%
!	TTATAAGATAAACCCTCATA+AGG	+	chr1_3:62003755-62003774	None:intergenic	25.0%
!!!	GGTTTTAATCTTTGTAGATT+TGG	-	chr1_3:62004547-62004566	Msa0131260:intron	25.0%
!!	GAAAATAATTGCTATTGCTT+TGG	+	chr1_3:62004693-62004712	None:intergenic	25.0%
!	CAAAAAATGGGGAAATTTAT+AGG	+	chr1_3:62004759-62004778	None:intergenic	25.0%
!!!	TTTTTAGTCTTGATCAGTTT+TGG	-	chr1_3:62003082-62003101	Msa0131260:three_prime_UTR	25.0%
!	ATCAAATTTCATTTCATGCA+TGG	+	chr1_3:62003158-62003177	None:intergenic	25.0%
!	ACACCATAAATTTGACAATA+AGG	+	chr1_3:62003367-62003386	None:intergenic	25.0%
!	ATTGTCAAATTTATGGTGTT+TGG	-	chr1_3:62003368-62003387	Msa0131260:intron	25.0%
!	GTACTTTACTTCTTCATATT+AGG	-	chr1_3:62003491-62003510	Msa0131260:CDS	25.0%
!	TTTACTTCTTCATATTAGGT+TGG	-	chr1_3:62003495-62003514	Msa0131260:CDS	25.0%
!	TTACTTCTTCATATTAGGTT+GGG	-	chr1_3:62003496-62003515	Msa0131260:CDS	25.0%
!	AATCATGTGAAATATGTTGT+TGG	-	chr1_3:62003520-62003539	Msa0131260:intron	25.0%
!	ATCATGTGAAATATGTTGTT+GGG	-	chr1_3:62003521-62003540	Msa0131260:intron	25.0%
!	AGTTTCTTAATGATACAAGA+AGG	+	chr1_3:62003550-62003569	None:intergenic	25.0%
!	TAAAAATATTCTCACCATCA+GGG	+	chr1_3:62003697-62003716	None:intergenic	25.0%
!!!	ATGGTGAGAATATTTTTACA+TGG	-	chr1_3:62003699-62003718	Msa0131260:intron	25.0%
!!!	GAGAATATTTTTACATGGAT+TGG	-	chr1_3:62003704-62003723	Msa0131260:intron	25.0%
!	TTATAAGATAAACCCTCATA+AGG	+	chr1_3:62003755-62003774	None:intergenic	25.0%
!!!	GGTTTTAATCTTTGTAGATT+TGG	-	chr1_3:62004547-62004566	Msa0131260:intron	25.0%
!!	GAAAATAATTGCTATTGCTT+TGG	+	chr1_3:62004693-62004712	None:intergenic	25.0%
!	CAAAAAATGGGGAAATTTAT+AGG	+	chr1_3:62004759-62004778	None:intergenic	25.0%
!!	AGGCCTTATTGTCAAATTTA+TGG	-	chr1_3:62003361-62003380	Msa0131260:intron	30.0%
	GTAAAAATATTCTCACCATC+AGG	+	chr1_3:62003698-62003717	None:intergenic	30.0%
	CTAAATTCATGAATACCTGA+AGG	+	chr1_3:62003889-62003908	None:intergenic	30.0%
	TTAAACTATTATCCGTGTGT+CGG	+	chr1_3:62003975-62003994	None:intergenic	30.0%
!!	GGTAATGGAAAAAAGAAGTA+CGG	+	chr1_3:62004033-62004052	None:intergenic	30.0%
	TTCCTACTTTGTGATTGTAT+AGG	-	chr1_3:62004135-62004154	Msa0131260:CDS	30.0%
	TCTGTCTATACAAAGTCTAT+TGG	-	chr1_3:62004195-62004214	Msa0131260:intron	30.0%
	TCTATACAAAGTCTATTGGA+AGG	-	chr1_3:62004199-62004218	Msa0131260:intron	30.0%
	TAGAAAATAACTGATCAGAC+AGG	+	chr1_3:62004270-62004289	None:intergenic	30.0%
	GAGCAATAACAACAAATAGT+TGG	+	chr1_3:62004422-62004441	None:intergenic	30.0%
	AAATGTTTACAACAGAAGTG+CGG	+	chr1_3:62004715-62004734	None:intergenic	30.0%
!	GAAGCATCATACAAAAAATG+GGG	+	chr1_3:62004770-62004789	None:intergenic	30.0%
!	CGAAGCATCATACAAAAAAT+GGG	+	chr1_3:62004771-62004790	None:intergenic	30.0%
!!!	CCATTTTTTGTATGATGCTT+CGG	-	chr1_3:62004769-62004788	Msa0131260:intron	30.0%
!!	AGGCCTTATTGTCAAATTTA+TGG	-	chr1_3:62003361-62003380	Msa0131260:intron	30.0%
	GTAAAAATATTCTCACCATC+AGG	+	chr1_3:62003698-62003717	None:intergenic	30.0%
	CTAAATTCATGAATACCTGA+AGG	+	chr1_3:62003889-62003908	None:intergenic	30.0%
	TTAAACTATTATCCGTGTGT+CGG	+	chr1_3:62003975-62003994	None:intergenic	30.0%
!!	GGTAATGGAAAAAAGAAGTA+CGG	+	chr1_3:62004033-62004052	None:intergenic	30.0%
	TTCCTACTTTGTGATTGTAT+AGG	-	chr1_3:62004135-62004154	Msa0131260:CDS	30.0%
	TCTGTCTATACAAAGTCTAT+TGG	-	chr1_3:62004195-62004214	Msa0131260:intron	30.0%
	TCTATACAAAGTCTATTGGA+AGG	-	chr1_3:62004199-62004218	Msa0131260:intron	30.0%
	TAGAAAATAACTGATCAGAC+AGG	+	chr1_3:62004270-62004289	None:intergenic	30.0%
	GAGCAATAACAACAAATAGT+TGG	+	chr1_3:62004422-62004441	None:intergenic	30.0%
	AAATGTTTACAACAGAAGTG+CGG	+	chr1_3:62004715-62004734	None:intergenic	30.0%
!	GAAGCATCATACAAAAAATG+GGG	+	chr1_3:62004770-62004789	None:intergenic	30.0%
!	CGAAGCATCATACAAAAAAT+GGG	+	chr1_3:62004771-62004790	None:intergenic	30.0%
!!!	CCATTTTTTGTATGATGCTT+CGG	-	chr1_3:62004769-62004788	Msa0131260:intron	30.0%
!	TTCAACAGGGGAATTTTCTT+CGG	+	chr1_3:62002916-62002935	None:intergenic	35.0%
	AGAAAATTCCCCTGTTGAAT+CGG	-	chr1_3:62002917-62002936	Msa0131260:three_prime_UTR	35.0%
	TTAGAAATATTTAAGGGGGG+AGG	+	chr1_3:62003033-62003052	None:intergenic	35.0%
	CAGACTACAGAAGGAATTAA+TGG	-	chr1_3:62003284-62003303	Msa0131260:intron	35.0%
!	AGTAAAGTACTAAGTATGCG+TGG	+	chr1_3:62003481-62003500	None:intergenic	35.0%
	TTCATTCGTTCTCACAAAGA+CGG	-	chr1_3:62003601-62003620	Msa0131260:CDS	35.0%
!!!	TTACTTTTTGTGCAGATGAG+TGG	-	chr1_3:62003647-62003666	Msa0131260:intron	35.0%
	TGGTTTAAAAGGATAGTTCG+GGG	+	chr1_3:62003795-62003814	None:intergenic	35.0%
	GTGGTTTAAAAGGATAGTTC+GGG	+	chr1_3:62003796-62003815	None:intergenic	35.0%
	GGTGGTTTAAAAGGATAGTT+CGG	+	chr1_3:62003797-62003816	None:intergenic	35.0%
	GTCCTATACAATCACAAAGT+AGG	+	chr1_3:62004140-62004159	None:intergenic	35.0%
	TTGTGATTGTATAGGACAAG+TGG	-	chr1_3:62004143-62004162	Msa0131260:intron	35.0%
!	TTTGGAATGATAAGGAAGGT+TGG	-	chr1_3:62004339-62004358	Msa0131260:intron	35.0%
	TTCAATGACTCTATTCCTTG+AGG	-	chr1_3:62004476-62004495	Msa0131260:intron	35.0%
	TCAATGACTCTATTCCTTGA+GGG	-	chr1_3:62004477-62004496	Msa0131260:intron	35.0%
	TCATGCAGATTTCAAGAGAA+TGG	-	chr1_3:62004609-62004628	Msa0131260:intron	35.0%
!	ATAAATCAACTTTCAGGTGC+AGG	+	chr1_3:62004664-62004683	None:intergenic	35.0%
!	CCGAAGCATCATACAAAAAA+TGG	+	chr1_3:62004772-62004791	None:intergenic	35.0%
	AGTCATCAGAAATCTTTCAG+AGG	+	chr1_3:62004820-62004839	None:intergenic	35.0%
!	TTCAACAGGGGAATTTTCTT+CGG	+	chr1_3:62002916-62002935	None:intergenic	35.0%
	AGAAAATTCCCCTGTTGAAT+CGG	-	chr1_3:62002917-62002936	Msa0131260:three_prime_UTR	35.0%
	TTAGAAATATTTAAGGGGGG+AGG	+	chr1_3:62003033-62003052	None:intergenic	35.0%
	CAGACTACAGAAGGAATTAA+TGG	-	chr1_3:62003284-62003303	Msa0131260:intron	35.0%
!	AGTAAAGTACTAAGTATGCG+TGG	+	chr1_3:62003481-62003500	None:intergenic	35.0%
	TTCATTCGTTCTCACAAAGA+CGG	-	chr1_3:62003601-62003620	Msa0131260:CDS	35.0%
!!!	TTACTTTTTGTGCAGATGAG+TGG	-	chr1_3:62003647-62003666	Msa0131260:intron	35.0%
	TGGTTTAAAAGGATAGTTCG+GGG	+	chr1_3:62003795-62003814	None:intergenic	35.0%
	GTGGTTTAAAAGGATAGTTC+GGG	+	chr1_3:62003796-62003815	None:intergenic	35.0%
	GGTGGTTTAAAAGGATAGTT+CGG	+	chr1_3:62003797-62003816	None:intergenic	35.0%
	GTCCTATACAATCACAAAGT+AGG	+	chr1_3:62004140-62004159	None:intergenic	35.0%
	TTGTGATTGTATAGGACAAG+TGG	-	chr1_3:62004143-62004162	Msa0131260:intron	35.0%
!	TTTGGAATGATAAGGAAGGT+TGG	-	chr1_3:62004339-62004358	Msa0131260:intron	35.0%
	TTCAATGACTCTATTCCTTG+AGG	-	chr1_3:62004476-62004495	Msa0131260:intron	35.0%
	TCAATGACTCTATTCCTTGA+GGG	-	chr1_3:62004477-62004496	Msa0131260:intron	35.0%
	TCATGCAGATTTCAAGAGAA+TGG	-	chr1_3:62004609-62004628	Msa0131260:intron	35.0%
!	ATAAATCAACTTTCAGGTGC+AGG	+	chr1_3:62004664-62004683	None:intergenic	35.0%
!	CCGAAGCATCATACAAAAAA+TGG	+	chr1_3:62004772-62004791	None:intergenic	35.0%
	AGTCATCAGAAATCTTTCAG+AGG	+	chr1_3:62004820-62004839	None:intergenic	35.0%
	ACACAACTTCCGTTTCTCAA+AGG	-	chr1_3:62003000-62003019	Msa0131260:three_prime_UTR	40.0%
!	GGAGATGAACCTTTGAGAAA+CGG	+	chr1_3:62003012-62003031	None:intergenic	40.0%
	GAAGGAATTAATGGCTCTCA+TGG	-	chr1_3:62003293-62003312	Msa0131260:intron	40.0%
!	GTTTGGTAACCTATGAAGCA+CGG	-	chr1_3:62003385-62003404	Msa0131260:intron	40.0%
	TAGTTACCCACTATGAAGCA+CGG	+	chr1_3:62003453-62003472	None:intergenic	40.0%
!	TCATCAGCATTTAGAGTGAG+TGG	+	chr1_3:62003627-62003646	None:intergenic	40.0%
!!	ACATGGATTGGCACAATTCA+AGG	-	chr1_3:62003716-62003735	Msa0131260:intron	40.0%
	TGGAAAAGGAACTCCTTATG+AGG	-	chr1_3:62003739-62003758	Msa0131260:intron	40.0%
	GGAAAAGGAACTCCTTATGA+GGG	-	chr1_3:62003740-62003759	Msa0131260:intron	40.0%
	GTTTAAAAGGATAGTTCGGG+GGG	+	chr1_3:62003793-62003812	None:intergenic	40.0%
	GGTTTAAAAGGATAGTTCGG+GGG	+	chr1_3:62003794-62003813	None:intergenic	40.0%
	TTCACTTGGGGTGGTTTAAA+AGG	+	chr1_3:62003806-62003825	None:intergenic	40.0%
	GTCGTCTCAAATTTCACTTG+GGG	+	chr1_3:62003818-62003837	None:intergenic	40.0%
	CGTCGTCTCAAATTTCACTT+GGG	+	chr1_3:62003819-62003838	None:intergenic	40.0%
	ACGTCGTCTCAAATTTCACT+TGG	+	chr1_3:62003820-62003839	None:intergenic	40.0%
	CATCCAAATGTTGACCAGTT+TGG	-	chr1_3:62003845-62003864	Msa0131260:intron	40.0%
	TTGCCAAACTGGTCAACATT+TGG	+	chr1_3:62003851-62003870	None:intergenic	40.0%
	CTAGACAAATGTTGCCAAAC+TGG	+	chr1_3:62003862-62003881	None:intergenic	40.0%
	CATTTGTCTAGACATCCTTC+AGG	-	chr1_3:62003871-62003890	Msa0131260:intron	40.0%
	ACATAATCCAGGGTAATCTG+AGG	-	chr1_3:62004002-62004021	Msa0131260:CDS	40.0%
	AGCAGTAAACACACAGGTAA+TGG	+	chr1_3:62004048-62004067	None:intergenic	40.0%
	TACCTGTGTGTTTACTGCTT+TGG	-	chr1_3:62004049-62004068	Msa0131260:CDS	40.0%
	ATCCAAAGCAGTAAACACAC+AGG	+	chr1_3:62004054-62004073	None:intergenic	40.0%
	CTGCAGCATAGTTGTTTAGA+GGG	+	chr1_3:62004316-62004335	None:intergenic	40.0%
	TCTGCAGCATAGTTGTTTAG+AGG	+	chr1_3:62004317-62004336	None:intergenic	40.0%
!!	TGCAGAGCTTTGGAATGATA+AGG	-	chr1_3:62004331-62004350	Msa0131260:intron	40.0%
!!	GAGCTTTGGAATGATAAGGA+AGG	-	chr1_3:62004335-62004354	Msa0131260:intron	40.0%
!!!	TGCAAGTTTTAGAACCCTCA+AGG	+	chr1_3:62004494-62004513	None:intergenic	40.0%
	CTAGTGCTCTAGTAGATTGT+AGG	-	chr1_3:62004526-62004545	Msa0131260:intron	40.0%
!!!	GGTCGAATGCGTATTTTAAC+TGG	-	chr1_3:62004568-62004587	Msa0131260:intron	40.0%
!!!	ATTTTAACTGGTGCTGCTCA+TGG	-	chr1_3:62004580-62004599	Msa0131260:intron	40.0%
	ACACAACTTCCGTTTCTCAA+AGG	-	chr1_3:62003000-62003019	Msa0131260:three_prime_UTR	40.0%
!	GGAGATGAACCTTTGAGAAA+CGG	+	chr1_3:62003012-62003031	None:intergenic	40.0%
	GAAGGAATTAATGGCTCTCA+TGG	-	chr1_3:62003293-62003312	Msa0131260:intron	40.0%
!	GTTTGGTAACCTATGAAGCA+CGG	-	chr1_3:62003385-62003404	Msa0131260:intron	40.0%
	TAGTTACCCACTATGAAGCA+CGG	+	chr1_3:62003453-62003472	None:intergenic	40.0%
!	TCATCAGCATTTAGAGTGAG+TGG	+	chr1_3:62003627-62003646	None:intergenic	40.0%
!!	ACATGGATTGGCACAATTCA+AGG	-	chr1_3:62003716-62003735	Msa0131260:intron	40.0%
	TGGAAAAGGAACTCCTTATG+AGG	-	chr1_3:62003739-62003758	Msa0131260:intron	40.0%
	GGAAAAGGAACTCCTTATGA+GGG	-	chr1_3:62003740-62003759	Msa0131260:intron	40.0%
	GTTTAAAAGGATAGTTCGGG+GGG	+	chr1_3:62003793-62003812	None:intergenic	40.0%
	GGTTTAAAAGGATAGTTCGG+GGG	+	chr1_3:62003794-62003813	None:intergenic	40.0%
	TTCACTTGGGGTGGTTTAAA+AGG	+	chr1_3:62003806-62003825	None:intergenic	40.0%
	GTCGTCTCAAATTTCACTTG+GGG	+	chr1_3:62003818-62003837	None:intergenic	40.0%
	CGTCGTCTCAAATTTCACTT+GGG	+	chr1_3:62003819-62003838	None:intergenic	40.0%
	ACGTCGTCTCAAATTTCACT+TGG	+	chr1_3:62003820-62003839	None:intergenic	40.0%
	CATCCAAATGTTGACCAGTT+TGG	-	chr1_3:62003845-62003864	Msa0131260:intron	40.0%
	TTGCCAAACTGGTCAACATT+TGG	+	chr1_3:62003851-62003870	None:intergenic	40.0%
	CTAGACAAATGTTGCCAAAC+TGG	+	chr1_3:62003862-62003881	None:intergenic	40.0%
	CATTTGTCTAGACATCCTTC+AGG	-	chr1_3:62003871-62003890	Msa0131260:intron	40.0%
	ACATAATCCAGGGTAATCTG+AGG	-	chr1_3:62004002-62004021	Msa0131260:CDS	40.0%
	AGCAGTAAACACACAGGTAA+TGG	+	chr1_3:62004048-62004067	None:intergenic	40.0%
	TACCTGTGTGTTTACTGCTT+TGG	-	chr1_3:62004049-62004068	Msa0131260:CDS	40.0%
	ATCCAAAGCAGTAAACACAC+AGG	+	chr1_3:62004054-62004073	None:intergenic	40.0%
	CTGCAGCATAGTTGTTTAGA+GGG	+	chr1_3:62004316-62004335	None:intergenic	40.0%
	TCTGCAGCATAGTTGTTTAG+AGG	+	chr1_3:62004317-62004336	None:intergenic	40.0%
!!	TGCAGAGCTTTGGAATGATA+AGG	-	chr1_3:62004331-62004350	Msa0131260:intron	40.0%
!!	GAGCTTTGGAATGATAAGGA+AGG	-	chr1_3:62004335-62004354	Msa0131260:intron	40.0%
!!!	TGCAAGTTTTAGAACCCTCA+AGG	+	chr1_3:62004494-62004513	None:intergenic	40.0%
	CTAGTGCTCTAGTAGATTGT+AGG	-	chr1_3:62004526-62004545	Msa0131260:intron	40.0%
!!!	GGTCGAATGCGTATTTTAAC+TGG	-	chr1_3:62004568-62004587	Msa0131260:intron	40.0%
!!!	ATTTTAACTGGTGCTGCTCA+TGG	-	chr1_3:62004580-62004599	Msa0131260:intron	40.0%
!	AACAGGGGAATTTTCTTCGG+CGG	+	chr1_3:62002913-62002932	None:intergenic	45.0%
	AAATTCCCCTGTTGAATCGG+CGG	-	chr1_3:62002920-62002939	Msa0131260:three_prime_UTR	45.0%
	GTGCAATTGCAGACTACAGA+AGG	-	chr1_3:62003275-62003294	Msa0131260:intron	45.0%
	TGTCTGTATCCGTGCTTCAT+AGG	+	chr1_3:62003397-62003416	None:intergenic	45.0%
	ATGAAGCACGGATACAGACA+CGG	-	chr1_3:62003397-62003416	Msa0131260:intron	45.0%
	TATGAAGCACGGACACTTCT+TGG	+	chr1_3:62003442-62003461	None:intergenic	45.0%
	AAGTGTCCGTGCTTCATAGT+GGG	-	chr1_3:62003444-62003463	Msa0131260:intron	45.0%
!	CTTTTTGTGCAGATGAGTGG+AGG	-	chr1_3:62003650-62003669	Msa0131260:intron	45.0%
!!	TGGATTGGCACAATTCAAGG+TGG	-	chr1_3:62003719-62003738	Msa0131260:intron	45.0%
	GGCACAATTCAAGGTGGAAA+AGG	-	chr1_3:62003725-62003744	Msa0131260:intron	45.0%
	GTCTCAAATTTCACTTGGGG+TGG	+	chr1_3:62003815-62003834	None:intergenic	45.0%
	ACTGACACAAACACAGACAC+CGG	-	chr1_3:62003941-62003960	Msa0131260:intron	45.0%
	CTGATCAGACAGGAACACAA+AGG	+	chr1_3:62004260-62004279	None:intergenic	45.0%
	TCTAACAGCAGAGCCTAACT+TGG	-	chr1_3:62004286-62004305	Msa0131260:intron	45.0%
	TTTAGAGGGCTCTCCAAGTT+AGG	+	chr1_3:62004302-62004321	None:intergenic	45.0%
	ACAACTATGCTGCAGAGCTT+TGG	-	chr1_3:62004321-62004340	Msa0131260:intron	45.0%
	GTCCACAAGCAGTATTTAGC+TGG	-	chr1_3:62004631-62004650	Msa0131260:intron	45.0%
	CTCCAGCTAAATACTGCTTG+TGG	+	chr1_3:62004636-62004655	None:intergenic	45.0%
!	AACAGGGGAATTTTCTTCGG+CGG	+	chr1_3:62002913-62002932	None:intergenic	45.0%
	AAATTCCCCTGTTGAATCGG+CGG	-	chr1_3:62002920-62002939	Msa0131260:three_prime_UTR	45.0%
	GTGCAATTGCAGACTACAGA+AGG	-	chr1_3:62003275-62003294	Msa0131260:intron	45.0%
	TGTCTGTATCCGTGCTTCAT+AGG	+	chr1_3:62003397-62003416	None:intergenic	45.0%
	ATGAAGCACGGATACAGACA+CGG	-	chr1_3:62003397-62003416	Msa0131260:intron	45.0%
	TATGAAGCACGGACACTTCT+TGG	+	chr1_3:62003442-62003461	None:intergenic	45.0%
	AAGTGTCCGTGCTTCATAGT+GGG	-	chr1_3:62003444-62003463	Msa0131260:intron	45.0%
!	CTTTTTGTGCAGATGAGTGG+AGG	-	chr1_3:62003650-62003669	Msa0131260:intron	45.0%
!!	TGGATTGGCACAATTCAAGG+TGG	-	chr1_3:62003719-62003738	Msa0131260:intron	45.0%
	GGCACAATTCAAGGTGGAAA+AGG	-	chr1_3:62003725-62003744	Msa0131260:intron	45.0%
	GTCTCAAATTTCACTTGGGG+TGG	+	chr1_3:62003815-62003834	None:intergenic	45.0%
	ACTGACACAAACACAGACAC+CGG	-	chr1_3:62003941-62003960	Msa0131260:intron	45.0%
	CTGATCAGACAGGAACACAA+AGG	+	chr1_3:62004260-62004279	None:intergenic	45.0%
	TCTAACAGCAGAGCCTAACT+TGG	-	chr1_3:62004286-62004305	Msa0131260:intron	45.0%
	TTTAGAGGGCTCTCCAAGTT+AGG	+	chr1_3:62004302-62004321	None:intergenic	45.0%
	ACAACTATGCTGCAGAGCTT+TGG	-	chr1_3:62004321-62004340	Msa0131260:intron	45.0%
	GTCCACAAGCAGTATTTAGC+TGG	-	chr1_3:62004631-62004650	Msa0131260:intron	45.0%
	CTCCAGCTAAATACTGCTTG+TGG	+	chr1_3:62004636-62004655	None:intergenic	45.0%
	GCTTCTTGGAGGATGATCGA+CGG	+	chr1_3:62002956-62002975	None:intergenic	50.0%
	GAAGTTGTGTCAGCAGGAAG+AGG	+	chr1_3:62002990-62003009	None:intergenic	50.0%
	GAAACGGAAGTTGTGTCAGC+AGG	+	chr1_3:62002996-62003015	None:intergenic	50.0%
	TTCTTGGTTTAGGCGTGTCC+TGG	+	chr1_3:62003426-62003445	None:intergenic	50.0%
	GCACGGACACTTCTTGGTTT+AGG	+	chr1_3:62003436-62003455	None:intergenic	50.0%
!	GAAGTGTCCGTGCTTCATAG+TGG	-	chr1_3:62003443-62003462	Msa0131260:intron	50.0%
	CAGATGAGTGGAGGAGATCT+TGG	-	chr1_3:62003659-62003678	Msa0131260:intron	50.0%
!	GGAGTATCTGCTTTCCCTGA+TGG	-	chr1_3:62003680-62003699	Msa0131260:intron	50.0%
	ATAGTTCGGGGGGAAACGTA+AGG	+	chr1_3:62003783-62003802	None:intergenic	50.0%
	GCTTCTTGGAGGATGATCGA+CGG	+	chr1_3:62002956-62002975	None:intergenic	50.0%
	GAAGTTGTGTCAGCAGGAAG+AGG	+	chr1_3:62002990-62003009	None:intergenic	50.0%
	GAAACGGAAGTTGTGTCAGC+AGG	+	chr1_3:62002996-62003015	None:intergenic	50.0%
	TTCTTGGTTTAGGCGTGTCC+TGG	+	chr1_3:62003426-62003445	None:intergenic	50.0%
	GCACGGACACTTCTTGGTTT+AGG	+	chr1_3:62003436-62003455	None:intergenic	50.0%
!	GAAGTGTCCGTGCTTCATAG+TGG	-	chr1_3:62003443-62003462	Msa0131260:intron	50.0%
	CAGATGAGTGGAGGAGATCT+TGG	-	chr1_3:62003659-62003678	Msa0131260:intron	50.0%
!	GGAGTATCTGCTTTCCCTGA+TGG	-	chr1_3:62003680-62003699	Msa0131260:intron	50.0%
	ATAGTTCGGGGGGAAACGTA+AGG	+	chr1_3:62003783-62003802	None:intergenic	50.0%
	CTTCGGCGGTGGTGTTTGAT+CGG	+	chr1_3:62002899-62002918	None:intergenic	55.0%
!	AGGGGAATTTTCTTCGGCGG+TGG	+	chr1_3:62002910-62002929	None:intergenic	55.0%
	TCTTGGAGGATGATCGACGG+TGG	+	chr1_3:62002953-62002972	None:intergenic	55.0%
	AGAAGCGAGAGGCTTCTTGG+AGG	+	chr1_3:62002967-62002986	None:intergenic	55.0%
	AGGAGAAGCGAGAGGCTTCT+TGG	+	chr1_3:62002970-62002989	None:intergenic	55.0%
	GGACACTCCTCAGATTACCC+TGG	+	chr1_3:62004012-62004031	None:intergenic	55.0%
	CTTCGGCGGTGGTGTTTGAT+CGG	+	chr1_3:62002899-62002918	None:intergenic	55.0%
!	AGGGGAATTTTCTTCGGCGG+TGG	+	chr1_3:62002910-62002929	None:intergenic	55.0%
	TCTTGGAGGATGATCGACGG+TGG	+	chr1_3:62002953-62002972	None:intergenic	55.0%
	AGAAGCGAGAGGCTTCTTGG+AGG	+	chr1_3:62002967-62002986	None:intergenic	55.0%
	AGGAGAAGCGAGAGGCTTCT+TGG	+	chr1_3:62002970-62002989	None:intergenic	55.0%
	GGACACTCCTCAGATTACCC+TGG	+	chr1_3:62004012-62004031	None:intergenic	55.0%
!!	ACTGGCCGCCGATTCAACAG+GGG	+	chr1_3:62002928-62002947	None:intergenic	60.0%
!!	GACTGGCCGCCGATTCAACA+GGG	+	chr1_3:62002929-62002948	None:intergenic	60.0%
	GCAGGAAGAGGAGAAGCGAG+AGG	+	chr1_3:62002978-62002997	None:intergenic	60.0%
	CGGATACAGACACGGACACC+AGG	-	chr1_3:62003405-62003424	Msa0131260:intron	60.0%
!!	CCGTGTGTCGGTGTTGTGTC+CGG	+	chr1_3:62003963-62003982	None:intergenic	60.0%
	CCGGACACAACACCGACACA+CGG	-	chr1_3:62003960-62003979	Msa0131260:intron	60.0%
!!	ACTGGCCGCCGATTCAACAG+GGG	+	chr1_3:62002928-62002947	None:intergenic	60.0%
!!	GACTGGCCGCCGATTCAACA+GGG	+	chr1_3:62002929-62002948	None:intergenic	60.0%
	GCAGGAAGAGGAGAAGCGAG+AGG	+	chr1_3:62002978-62002997	None:intergenic	60.0%
	CGGATACAGACACGGACACC+AGG	-	chr1_3:62003405-62003424	Msa0131260:intron	60.0%
!!	CCGTGTGTCGGTGTTGTGTC+CGG	+	chr1_3:62003963-62003982	None:intergenic	60.0%
	CCGGACACAACACCGACACA+CGG	-	chr1_3:62003960-62003979	Msa0131260:intron	60.0%
!!	CGACTGGCCGCCGATTCAAC+AGG	+	chr1_3:62002930-62002949	None:intergenic	65.0%
	GGATGATCGACGGTGGCGAC+TGG	+	chr1_3:62002946-62002965	None:intergenic	65.0%
!!	CGACTGGCCGCCGATTCAAC+AGG	+	chr1_3:62002930-62002949	None:intergenic	65.0%
	GGATGATCGACGGTGGCGAC+TGG	+	chr1_3:62002946-62002965	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_3	gene	62002888	62004929	62002888	ID=Msa0131260;Name=Msa0131260
chr1_3	mRNA	62002888	62004929	62002888	ID=Msa0131260-mRNA-1;Parent=Msa0131260;Name=Msa0131260-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0\|0.5\|0.6\|1\|0.25\|0.4\|5\|251\|166
chr1_3	exon	62002888	62003200	62002888	ID=Msa0131260-mRNA-1:exon:20643;Parent=Msa0131260-mRNA-1
chr1_3	exon	62003461	62003520	62003461	ID=Msa0131260-mRNA-1:exon:20642;Parent=Msa0131260-mRNA-1
chr1_3	exon	62003597	62003660	62003597	ID=Msa0131260-mRNA-1:exon:20641;Parent=Msa0131260-mRNA-1
chr1_3	exon	62003964	62004155	62003964	ID=Msa0131260-mRNA-1:exon:20640;Parent=Msa0131260-mRNA-1
chr1_3	exon	62004807	62004929	62004807	ID=Msa0131260-mRNA-1:exon:20639;Parent=Msa0131260-mRNA-1
chr1_3	CDS	62004807	62004929	62004807	ID=Msa0131260-mRNA-1:cds;Parent=Msa0131260-mRNA-1
chr1_3	CDS	62003964	62004155	62003964	ID=Msa0131260-mRNA-1:cds;Parent=Msa0131260-mRNA-1
chr1_3	CDS	62003597	62003660	62003597	ID=Msa0131260-mRNA-1:cds;Parent=Msa0131260-mRNA-1
chr1_3	CDS	62003461	62003520	62003461	ID=Msa0131260-mRNA-1:cds;Parent=Msa0131260-mRNA-1
chr1_3	CDS	62003139	62003200	62003139	ID=Msa0131260-mRNA-1:cds;Parent=Msa0131260-mRNA-1
chr1_3	three_prime_UTR	62002888	62003138	62002888	ID=Msa0131260-mRNA-1:three_prime_utr;Parent=Msa0131260-mRNA-1

Gene Sequence

>Msa0131260

ATGGAGGTCCGATCAAACACCACCGCCGAAGAAAATTCCCCTGTTGAATCGGCGGCCAGTCGCCACCGTCGATCATCCTCCAAGAAGCCTCTCGCTTCTCCTCTTCCTGCTGACACAACTTCCATGAGTGGAGGAGATCTTGGAGTATCTGCTTTCCCTGATGGTGAGAATATTTTTACATGGATTGGCACAATTCAAGGTGGAAAAGGAACTCCTTATGAGGGTTTATCTTATAAACTTTCCTTACGTTTCCCCCCGAACTATCCTTTTAAACCACCCCAAGTGAAATTTGAGACGACGTGCTTTCATCCAAATGACAAGTGGTCTTCAGCTTATGACTGTAGAACTATGCTTCTGTCTATACAAAGTCTATTGGAAGAGCCTAACTTGGAGAGCCCTCTAAACAACTATGCTGCAGAGCTTTGGAATGATAAGGAAGATTTCAAGAGAATGGTCCACAAGCAGTATTTAGCTGGAGAAGCACCTGCACCTGAAAGTTGA

Protein sequence

>Msa0131260

MEVRSNTTAEENSPVESAASRHRRSSSKKPLASPLPADTTSMSGGDLGVSAFPDGENIFTWIGTIQGGKGTPYEGLSYKLSLRFPPNYPFKPPQVKFETTCFHPNDKWSSAYDCRTMLLSIQSLLEEPNLESPLNNYAAELWNDKEDFKRMVHKQYLAGEAPAPES*