AlfalfaGEDB | Msa0131480

M. sativa cultivar zhongmu-4 / Msa0131480

KEGG: -
GO: -
PFAM: PF03195.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0131480	sp\|Q9LQR0\|LBD1_ARATH	68.072	166	44	5	69	230	29	189	2.86e-73	223

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0131480	G7I9N1	98.696	230	2	1	1	230	1	229	1.90e-162	457

TFs/TRs:

Gene ID	Type	Classification
Msa0131480	TF	LOB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0069450	Msa0131480	0.962902	1.963395e-121	-8.615850e-47
Msa0131480	Msa0131570	0.957246	4.306744e-115	-8.615850e-47
Msa0131480	Msa0177350	0.977787	1.748970e-144	-8.615850e-47
Msa0131480	Msa0581590	0.996713	3.473769e-231	-8.615850e-47
Msa0131480	Msa0660580	0.994839	1.183184e-210	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0131480	MtrunA17_Chr1g0200201	98.696	230	2	1	1	230	1	229	3.65e-166	457
Msa0131480	MtrunA17_Chr4g0030001	67.416	178	45	7	64	230	15	190	4.64e-77	230
Msa0131480	MtrunA17_Chr2g0311601	71.818	110	31	0	71	180	11	120	1.24e-54	172
Msa0131480	MtrunA17_Chr4g0043421	67.890	109	35	0	72	180	14	122	2.54e-51	164
Msa0131480	MtrunA17_Chr3g0114061	71.845	103	29	0	72	174	7	109	1.18e-50	162
Msa0131480	MtrunA17_Chr5g0437571	65.487	113	39	0	72	184	5	117	1.80e-50	162
Msa0131480	MtrunA17_Chr3g0106101	66.055	109	37	0	72	180	6	114	1.02e-49	160
Msa0131480	MtrunA17_Chr2g0326051	63.200	125	38	4	114	230	1	125	1.85e-44	145
Msa0131480	MtrunA17_Chr5g0438091	54.386	114	52	0	71	184	37	150	2.24e-41	139
Msa0131480	MtrunA17_Chr3g0117121	59.048	105	43	0	72	176	9	113	4.64e-41	139
Msa0131480	MtrunA17_Chr3g0115431	58.824	102	42	0	72	173	8	109	1.46e-40	138
Msa0131480	MtrunA17_Chr4g0058651	59.223	103	42	0	72	174	10	112	1.98e-40	137
Msa0131480	MtrunA17_Chr6g0449641	52.174	115	55	0	72	186	8	122	2.70e-40	135
Msa0131480	MtrunA17_Chr7g0227511	58.252	103	43	0	72	174	10	112	1.00e-39	134
Msa0131480	MtrunA17_Chr3g0129071	52.101	119	56	1	64	181	37	155	1.00e-39	136
Msa0131480	MtrunA17_Chr5g0402611	57.843	102	43	0	72	173	7	108	1.04e-38	136
Msa0131480	MtrunA17_Chr5g0432451	59.459	111	45	0	71	181	41	151	1.69e-38	133
Msa0131480	MtrunA17_Chr6g0449651	55.340	103	46	0	72	174	66	168	1.33e-37	130
Msa0131480	MtrunA17_Chr3g0097221	53.774	106	49	0	72	177	6	111	9.16e-37	130
Msa0131480	MtrunA17_Chr5g0437401	55.882	102	45	0	72	173	10	111	3.57e-36	125
Msa0131480	MtrunA17_Chr3g0113891	56.566	99	43	0	72	170	13	111	1.75e-35	124
Msa0131480	MtrunA17_Chr7g0225111	45.690	116	61	1	69	182	1	116	3.40e-33	116
Msa0131480	MtrunA17_Chr8g0353981	57.843	102	43	0	72	173	6	107	3.54e-32	117
Msa0131480	MtrunA17_Chr7g0260971	51.456	103	49	1	72	173	13	115	2.26e-31	114
Msa0131480	MtrunA17_Chr8g0351721	50.943	106	51	1	72	176	17	122	2.78e-31	114
Msa0131480	MtrunA17_Chr6g0460951	43.697	119	64	2	70	186	37	154	3.34e-31	114
Msa0131480	MtrunA17_Chr7g0245871	50.000	102	50	1	73	173	27	128	3.45e-31	114
Msa0131480	MtrunA17_Chr1g0184281	44.531	128	58	2	48	174	2	117	2.86e-30	111
Msa0131480	MtrunA17_Chr8g0374601	48.077	104	54	0	70	173	23	126	3.39e-30	113
Msa0131480	MtrunA17_Chr8g0351701	48.544	103	52	1	72	173	22	124	5.92e-30	111
Msa0131480	MtrunA17_Chr8g0374591	48.077	104	54	0	70	173	5	108	6.39e-30	108
Msa0131480	MtrunA17_Chr1g0184271	51.961	102	46	2	73	171	12	113	1.46e-29	110
Msa0131480	MtrunA17_Chr5g0444351	41.905	105	61	0	69	173	1	105	4.53e-29	106
Msa0131480	MtrunA17_Chr7g0261031	51.546	97	46	1	72	167	7	103	1.75e-28	107
Msa0131480	MtrunA17_Chr2g0326041	61.702	94	21	2	26	119	1	79	2.57e-28	102
Msa0131480	MtrunA17_Chr8g0374581	46.226	106	56	1	70	174	5	110	5.63e-27	103
Msa0131480	MtrunA17_Chr5g0435641	46.875	96	50	1	72	166	6	101	3.52e-26	100
Msa0131480	MtrunA17_Chr6g0452691	42.609	115	61	2	74	183	10	124	1.91e-25	98.2
Msa0131480	MtrunA17_Chr6g0452661	42.623	122	59	3	74	187	10	128	1.40e-24	97.8
Msa0131480	MtrunA17_Chr6g0460941	45.455	88	47	1	73	159	7	94	1.93e-24	93.2
Msa0131480	MtrunA17_Chr4g0059901	43.000	100	57	0	74	173	11	110	5.85e-24	96.3
Msa0131480	MtrunA17_Chr7g0245861	49.451	91	43	2	72	159	11	101	3.14e-23	91.3
Msa0131480	MtrunA17_Chr6g0452671	35.762	151	90	4	74	224	12	155	8.57e-22	89.4
Msa0131480	MtrunA17_Chr4g0040831	40.860	93	55	0	74	166	16	108	9.23e-22	89.0
Msa0131480	MtrunA17_Chr4g0055441	40.000	115	58	3	74	183	3	111	1.09e-20	85.1
Msa0131480	MtrunA17_Chr8g0342351	39.000	100	61	0	74	173	13	112	6.20e-20	85.5
Msa0131480	MtrunA17_Chr2g0330201	40.860	93	55	0	74	166	20	112	1.13e-18	82.8
Msa0131480	MtrunA17_Chr5g0439111	38.614	101	61	1	74	173	10	110	3.92e-16	74.7
Msa0131480	MtrunA17_Chr4g0046201	32.258	93	63	0	69	161	2	94	1.13e-14	71.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0131480	AT1G07900.1	68.072	166	44	5	69	230	29	189	2.90e-74	223
Msa0131480	AT2G28500.1	63.187	182	47	4	69	230	51	232	2.96e-71	217
Msa0131480	AT2G30130.1	68.519	108	34	0	72	179	7	114	3.60e-50	162
Msa0131480	AT1G16530.1	65.421	107	36	1	71	176	12	118	2.86e-47	154
Msa0131480	AT1G31320.1	67.273	110	36	0	72	181	12	121	2.26e-43	144
Msa0131480	AT5G63090.4	60.194	103	41	0	72	174	10	112	4.48e-41	139
Msa0131480	AT5G63090.3	60.194	103	41	0	72	174	10	112	4.48e-41	139
Msa0131480	AT5G63090.2	60.194	103	41	0	72	174	10	112	4.48e-41	139
Msa0131480	AT5G63090.1	60.194	103	41	0	72	174	10	112	4.48e-41	139
Msa0131480	AT2G23660.2	58.654	104	43	0	72	175	4	107	6.48e-41	142
Msa0131480	AT2G23660.3	58.654	104	43	0	72	175	4	107	6.48e-41	142
Msa0131480	AT2G23660.1	58.654	104	43	0	72	175	4	107	6.48e-41	142
Msa0131480	AT2G30340.1	52.632	114	54	0	71	184	50	163	9.56e-41	140
Msa0131480	AT2G30340.2	52.632	114	54	0	71	184	51	164	1.00e-40	140
Msa0131480	AT3G27650.1	58.654	104	43	0	72	175	38	141	2.93e-40	136
Msa0131480	AT5G66870.1	57.843	102	43	0	72	173	6	107	1.32e-38	136
Msa0131480	AT2G40470.2	49.296	142	68	2	61	200	6	145	5.09e-38	131
Msa0131480	AT2G40470.1	49.296	142	68	2	61	200	31	170	1.03e-37	131
Msa0131480	AT3G26660.1	56.000	100	44	0	74	173	6	105	1.76e-37	127
Msa0131480	AT3G26620.1	56.000	100	44	0	74	173	6	105	1.79e-37	127
Msa0131480	AT3G11090.1	54.369	103	47	0	72	174	10	112	7.66e-37	127
Msa0131480	AT1G65620.1	59.804	102	41	0	72	173	8	109	2.36e-33	119
Msa0131480	AT1G65620.4	59.804	102	41	0	72	173	8	109	2.36e-33	119
Msa0131480	AT1G65620.3	59.804	102	41	0	72	173	8	109	2.36e-33	119
Msa0131480	AT1G65620.5	59.804	102	41	0	72	173	8	109	2.36e-33	119
Msa0131480	AT1G65620.2	59.804	102	41	0	72	173	8	109	2.36e-33	119
Msa0131480	AT4G00210.1	52.336	107	50	1	72	177	10	116	3.02e-33	120
Msa0131480	AT3G03760.1	48.214	112	57	1	72	182	50	161	4.49e-33	120
Msa0131480	AT4G00220.1	50.980	102	49	1	76	176	20	121	1.33e-30	113
Msa0131480	AT2G31310.1	48.077	104	53	1	70	172	4	107	2.55e-29	108
Msa0131480	AT2G45410.1	54.545	99	44	1	76	173	19	117	3.44e-29	108
Msa0131480	AT2G42430.1	46.667	105	55	1	72	175	14	118	4.14e-29	109
Msa0131480	AT2G42440.1	54.167	96	43	1	72	166	6	101	5.45e-29	109
Msa0131480	AT2G45420.1	49.020	102	51	1	76	176	40	141	3.57e-28	107
Msa0131480	AT3G58190.1	49.474	95	47	1	73	166	11	105	2.02e-26	102
Msa0131480	AT3G50510.1	45.192	104	57	0	70	173	9	112	4.27e-26	100
Msa0131480	AT3G50510.2	45.192	104	57	0	70	173	9	112	4.27e-26	100
Msa0131480	AT5G06080.1	44.340	106	58	1	72	176	6	111	3.50e-25	97.8
Msa0131480	AT1G72980.1	45.263	95	52	0	72	166	12	106	5.23e-24	95.9
Msa0131480	AT5G35900.1	41.000	100	59	0	74	173	6	105	4.58e-23	93.2
Msa0131480	AT3G47870.1	41.176	102	60	0	72	173	35	136	3.66e-22	93.2
Msa0131480	AT3G13850.1	43.011	93	53	0	74	166	37	129	5.42e-22	91.7
Msa0131480	AT4G22700.1	37.624	101	61	2	74	173	6	105	1.16e-15	73.2
Msa0131480	AT1G06280.1	38.824	85	49	1	73	154	24	108	1.26e-15	73.2
Msa0131480	AT2G19820.1	38.202	89	54	1	72	159	11	99	1.09e-14	68.6
Msa0131480	AT5G15060.1	42.857	77	40	2	71	144	15	90	9.08e-12	61.2
Msa0131480	AT1G36000.1	33.333	87	58	0	73	159	9	95	5.01e-11	58.9

Find 72 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTCTGCTTGGGAGCCTCTT+TGG	0.215297	1_3:+62339070	Msa0131480:CDS
ACCATTGCTCATAGAGTCTT+TGG	0.230237	1_3:+62337846	Msa0131480:CDS
AGGATAAGGGACCCAGTTTA+TGG	0.257729	1_3:+62338823	Msa0131480:CDS
GTCTTCCTCCACTTGGAGTT+TGG	0.282115	1_3:-62339221	None:intergenic
GCACCTGCACACCCATAAAC+TGG	0.308339	1_3:-62338835	None:intergenic
GCACAAGGGCTAACAATAAT+TGG	0.330791	1_3:-62337741	None:intergenic
CACTAGCTCAGCTTGTGCTT+TGG	0.331624	1_3:-62338905	None:intergenic
GCATCTGCTCTCTGAGGTTC+AGG	0.338371	1_3:-62338769	None:intergenic
CAACATCATTAAGTTCTTGC+AGG	0.371270	1_3:+62337875	Msa0131480:CDS
GTGCCACTAAATTTGCTTGT+TGG	0.373985	1_3:-62338939	None:intergenic
GGTGGAGGAGATGGTGGTTG+AGG	0.390187	1_3:-62337717	None:intergenic
GGTTAATATTATTAATTCAA+TGG	0.391292	1_3:-62337485	None:intergenic
CCTGCGACGGAGAATCTTGC+AGG	0.417127	1_3:-62337766	None:intergenic
ATGAAGCAAATGCTAGGATA+AGG	0.419747	1_3:+62338809	Msa0131480:CDS
ACTCATATCAACATGAGGTT+GGG	0.426563	1_3:-62339022	None:intergenic
TGGTGGTTGAGGAGCGGCCG+AGG	0.441752	1_3:-62337706	None:intergenic
CCTGCAAGATTCTCCGTCGC+AGG	0.451176	1_3:+62337766	Msa0131480:CDS
GTGTGAATGGGAACATGAAT+TGG	0.456087	1_3:-62337588	None:intergenic
GGATAAGGGACCCAGTTTAT+GGG	0.457995	1_3:+62338824	Msa0131480:CDS
TTGCCAACAAGCAAATTTAG+TGG	0.460480	1_3:+62338936	Msa0131480:CDS
AGCTCTAGTCTTCCTCCACT+TGG	0.483323	1_3:-62339228	None:intergenic
GACCCAGTTTATGGGTGTGC+AGG	0.487417	1_3:+62338832	Msa0131480:CDS
GTTTGATAGCATGGTGTGAA+TGG	0.487876	1_3:-62337601	None:intergenic
TTTAGTGGCACTAATTTGCA+TGG	0.489022	1_3:+62338951	Msa0131480:CDS
AGAATCTTGCAGGCAGCACA+AGG	0.497089	1_3:-62337756	None:intergenic
TTCTCAATATTCTCCTCCCT+CGG	0.503995	1_3:+62337689	Msa0131480:CDS
GGAGGAGAATATTGAGAAGC+TGG	0.504167	1_3:-62337684	None:intergenic
GGATCAGTTGGAGGAAAATA+CGG	0.507188	1_3:-62337813	None:intergenic
ATAATTGGTGGTGGAGGAGA+TGG	0.508722	1_3:-62337726	None:intergenic
GAATATTGAGAAGCTGGTGA+AGG	0.509511	1_3:-62337678	None:intergenic
TGAAGCAAATGCTAGGATAA+GGG	0.510590	1_3:+62338810	Msa0131480:CDS
AACTCATATCAACATGAGGT+TGG	0.513338	1_3:-62339023	None:intergenic
TAGATGAGGAGGAGAAGTAG+TGG	0.517097	1_3:-62337559	None:intergenic
GCTGGTGAAGGGAAAGGTGT+GGG	0.521269	1_3:-62337666	None:intergenic
CTCATATCAACATGAGGTTG+GGG	0.524829	1_3:-62339021	None:intergenic
AAAGGTGTGGGAGATTGTAA+AGG	0.533363	1_3:-62337654	None:intergenic
TGAGAAGCTGGTGAAGGGAA+AGG	0.534082	1_3:-62337672	None:intergenic
TGTGAATGGGAACATGAATT+GGG	0.535599	1_3:-62337587	None:intergenic
ATTGGGATTGGTAGATGAGG+AGG	0.537299	1_3:-62337570	None:intergenic
AGCTGGTGAAGGGAAAGGTG+TGG	0.541852	1_3:-62337667	None:intergenic
AATTAATTTCATGTCCAAAG+AGG	0.542951	1_3:-62339084	None:intergenic
ATGGGAACATGAATTGGGAT+TGG	0.544335	1_3:-62337582	None:intergenic
GGTGGTTGAGGAGCGGCCGA+GGG	0.551956	1_3:-62337705	None:intergenic
TTAATCATCATGTCATGGTC+TGG	0.552049	1_3:-62338994	None:intergenic
GGAGGTGAAGAAGATGAAGA+TGG	0.556111	1_3:-62337633	None:intergenic
GGTGTGGGAGATTGTAAAGG+AGG	0.557869	1_3:-62337651	None:intergenic
CTTAATTTCCAAACTCCAAG+TGG	0.558448	1_3:+62339213	Msa0131480:three_prime_UTR
CACCTGCACACCCATAAACT+GGG	0.560148	1_3:-62338834	None:intergenic
ATTGGTGGTGGAGGAGATGG+TGG	0.560667	1_3:-62337723	None:intergenic
GGGCTAACAATAATTGGTGG+TGG	0.570890	1_3:-62337735	None:intergenic
GGTTGAGGAGCGGCCGAGGG+AGG	0.575874	1_3:-62337702	None:intergenic
TGTAGTAGAGTTTGATAGCA+TGG	0.578297	1_3:-62337610	None:intergenic
TGGTTTATGAAGCAAATGCT+AGG	0.582803	1_3:+62338803	Msa0131480:CDS
TGAATTGGGATTGGTAGATG+AGG	0.583122	1_3:-62337573	None:intergenic
TTTGATAGCATGGTGTGAAT+GGG	0.585620	1_3:-62337600	None:intergenic
TCCAAAGACTCTATGAGCAA+TGG	0.589978	1_3:-62337847	None:intergenic
CTAACAATAATTGGTGGTGG+AGG	0.590976	1_3:-62337732	None:intergenic
AACTTGAGTGGATCAGTTGG+AGG	0.595286	1_3:-62337822	None:intergenic
CTTACTGCATCTGCTCTCTG+AGG	0.598505	1_3:-62338775	None:intergenic
GTGAACTTGAGTGGATCAGT+TGG	0.601167	1_3:-62337825	None:intergenic
AATATTGAGAAGCTGGTGAA+GGG	0.602247	1_3:-62337677	None:intergenic
GCTGATTAATCATCATGTCA+TGG	0.608852	1_3:-62338999	None:intergenic
TTGTGTTATGTGAGAAACAG+AGG	0.613071	1_3:-62337518	None:intergenic
AGGAGATGGTGGTTGAGGAG+CGG	0.615539	1_3:-62337712	None:intergenic
AGCAGATGCAGTAAGCAGCA+TGG	0.619103	1_3:+62338783	Msa0131480:CDS
TGAGCAATGGTGAACTTGAG+TGG	0.624171	1_3:-62337834	None:intergenic
AATTTCCAAACTCCAAGTGG+AGG	0.632065	1_3:+62339216	Msa0131480:three_prime_UTR
CAAGGGCTAACAATAATTGG+TGG	0.638801	1_3:-62337738	None:intergenic
CTGTTTCTCACATAACACAA+TGG	0.645844	1_3:+62337521	Msa0131480:exon
AAGCAACTCATATCAACATG+AGG	0.663119	1_3:-62339027	None:intergenic
AGAAACAGAGGAAAACAGAG+AGG	0.690643	1_3:-62337506	None:intergenic
GAATCTTGCAGGCAGCACAA+GGG	0.696277	1_3:-62337755	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GGTTAATATTATTAATTCAA+TGG	-	chr1_3:62337488-62337507	None:intergenic	15.0%
!!!	AAATATTTTTTCCAACATAT+TGG	+	chr1_3:62337965-62337984	Msa0131480:intron	15.0%
!!	AATAAAATGTACTATAAGTT+AGG	-	chr1_3:62338570-62338589	None:intergenic	15.0%
!!	AATAAATTTAGAGAAAATCT+TGG	+	chr1_3:62338599-62338618	Msa0131480:intron	15.0%
!!!	TAAAATTCCATTAATTTTTC+AGG	+	chr1_3:62338741-62338760	Msa0131480:intron	15.0%
!!	GGTTAATATTATTAATTCAA+TGG	-	chr1_3:62337488-62337507	None:intergenic	15.0%
!!!	AAATATTTTTTCCAACATAT+TGG	+	chr1_3:62337965-62337984	Msa0131480:intron	15.0%
!!	AATAAAATGTACTATAAGTT+AGG	-	chr1_3:62338570-62338589	None:intergenic	15.0%
!!	AATAAATTTAGAGAAAATCT+TGG	+	chr1_3:62338599-62338618	Msa0131480:intron	15.0%
!!!	TAAAATTCCATTAATTTTTC+AGG	+	chr1_3:62338741-62338760	Msa0131480:intron	15.0%
!!!	TATTTTAGTAATGTGCAAAT+TGG	-	chr1_3:62337950-62337969	None:intergenic	20.0%
!!	TGTATGATCTTAAAACAAAT+TGG	+	chr1_3:62337997-62338016	Msa0131480:intron	20.0%
!!	TGTAAAAGATAAAAAGTTAG+TGG	-	chr1_3:62338298-62338317	None:intergenic	20.0%
!!	CATGAAAAAAATAAAAGCTA+TGG	+	chr1_3:62338316-62338335	Msa0131480:intron	20.0%
!!	ATCACAAGTCAAAAATAATT+AGG	+	chr1_3:62338430-62338449	Msa0131480:intron	20.0%
!!!	ATTAAGTTTTACAGTTACTA+TGG	-	chr1_3:62339199-62339218	None:intergenic	20.0%
!!!	TATTTTAGTAATGTGCAAAT+TGG	-	chr1_3:62337950-62337969	None:intergenic	20.0%
!!	TGTATGATCTTAAAACAAAT+TGG	+	chr1_3:62337997-62338016	Msa0131480:intron	20.0%
!!	TGTAAAAGATAAAAAGTTAG+TGG	-	chr1_3:62338298-62338317	None:intergenic	20.0%
!!	CATGAAAAAAATAAAAGCTA+TGG	+	chr1_3:62338316-62338335	Msa0131480:intron	20.0%
!!	ATCACAAGTCAAAAATAATT+AGG	+	chr1_3:62338430-62338449	Msa0131480:intron	20.0%
!!!	ATTAAGTTTTACAGTTACTA+TGG	-	chr1_3:62339199-62339218	None:intergenic	20.0%
!!!	ACATGATGATTTTTTCTTGT+TGG	-	chr1_3:62337921-62337940	None:intergenic	25.0%
!	CATATAAATGTCCAATATGT+TGG	-	chr1_3:62337979-62337998	None:intergenic	25.0%
!!	AATTGTCTCATAACAGTTTT+AGG	+	chr1_3:62338117-62338136	Msa0131480:intron	25.0%
!!	ATTGTCTCATAACAGTTTTA+GGG	+	chr1_3:62338118-62338137	Msa0131480:intron	25.0%
!	AAAGATAAAAAGTTAGTGGT+TGG	-	chr1_3:62338294-62338313	None:intergenic	25.0%
!	ATGAAAAGATTCCAAAATGT+GGG	-	chr1_3:62338458-62338477	None:intergenic	25.0%
!	AATGAAAAGATTCCAAAATG+TGG	-	chr1_3:62338459-62338478	None:intergenic	25.0%
!	TTCATTATGTCTAACGATTA+TGG	+	chr1_3:62338473-62338492	Msa0131480:intron	25.0%
!	AAACTTATGTGCATTTGTTT+AGG	-	chr1_3:62338659-62338678	None:intergenic	25.0%
!!	TTTTGTCCATTTTCAAATCA+TGG	+	chr1_3:62338676-62338695	Msa0131480:intron	25.0%
!	ATTAAGCCATGATTTGAAAA+TGG	-	chr1_3:62338685-62338704	None:intergenic	25.0%
!!!	TTTTTAGAGGACAACAATTT+TGG	+	chr1_3:62339048-62339067	Msa0131480:CDS	25.0%
!!!	TTTTAGAGGACAACAATTTT+GGG	+	chr1_3:62339049-62339068	Msa0131480:CDS	25.0%
!	AATTAATTTCATGTCCAAAG+AGG	-	chr1_3:62339087-62339106	None:intergenic	25.0%
!!!	ACATGATGATTTTTTCTTGT+TGG	-	chr1_3:62337921-62337940	None:intergenic	25.0%
!	CATATAAATGTCCAATATGT+TGG	-	chr1_3:62337979-62337998	None:intergenic	25.0%
!!	AATTGTCTCATAACAGTTTT+AGG	+	chr1_3:62338117-62338136	Msa0131480:intron	25.0%
!!	ATTGTCTCATAACAGTTTTA+GGG	+	chr1_3:62338118-62338137	Msa0131480:intron	25.0%
!	AAAGATAAAAAGTTAGTGGT+TGG	-	chr1_3:62338294-62338313	None:intergenic	25.0%
!	ATGAAAAGATTCCAAAATGT+GGG	-	chr1_3:62338458-62338477	None:intergenic	25.0%
!	AATGAAAAGATTCCAAAATG+TGG	-	chr1_3:62338459-62338478	None:intergenic	25.0%
!	TTCATTATGTCTAACGATTA+TGG	+	chr1_3:62338473-62338492	Msa0131480:intron	25.0%
!	AAACTTATGTGCATTTGTTT+AGG	-	chr1_3:62338659-62338678	None:intergenic	25.0%
!!	TTTTGTCCATTTTCAAATCA+TGG	+	chr1_3:62338676-62338695	Msa0131480:intron	25.0%
!	ATTAAGCCATGATTTGAAAA+TGG	-	chr1_3:62338685-62338704	None:intergenic	25.0%
!!!	TTTTTAGAGGACAACAATTT+TGG	+	chr1_3:62339048-62339067	Msa0131480:CDS	25.0%
!!!	TTTTAGAGGACAACAATTTT+GGG	+	chr1_3:62339049-62339068	Msa0131480:CDS	25.0%
!	AATTAATTTCATGTCCAAAG+AGG	-	chr1_3:62339087-62339106	None:intergenic	25.0%
!!	TTGTCTCATAACAGTTTTAG+GGG	+	chr1_3:62338119-62338138	Msa0131480:intron	30.0%
!!	TTTTAGGGGAACAAAATCAT+GGG	+	chr1_3:62338133-62338152	Msa0131480:intron	30.0%
	TGGATGGAAAAGATAACAAA+AGG	+	chr1_3:62338170-62338189	Msa0131480:intron	30.0%
	AAGATATAGTGGTTACACTA+TGG	-	chr1_3:62338410-62338429	None:intergenic	30.0%
!	TGACTTGTGATAAGATATAG+TGG	-	chr1_3:62338421-62338440	None:intergenic	30.0%
!!	AGTTTTTCACTTTGGAAACT+TGG	-	chr1_3:62338517-62338536	None:intergenic	30.0%
	GGTAGTTCCTGAAAAATTAA+TGG	-	chr1_3:62338751-62338770	None:intergenic	30.0%
!!!	TGATATGAGTTGCTTTTTAG+AGG	+	chr1_3:62339035-62339054	Msa0131480:CDS	30.0%
!!	TTGTCTCATAACAGTTTTAG+GGG	+	chr1_3:62338119-62338138	Msa0131480:intron	30.0%
!!	TTTTAGGGGAACAAAATCAT+GGG	+	chr1_3:62338133-62338152	Msa0131480:intron	30.0%
	TGGATGGAAAAGATAACAAA+AGG	+	chr1_3:62338170-62338189	Msa0131480:intron	30.0%
	AAGATATAGTGGTTACACTA+TGG	-	chr1_3:62338410-62338429	None:intergenic	30.0%
!	TGACTTGTGATAAGATATAG+TGG	-	chr1_3:62338421-62338440	None:intergenic	30.0%
!!	AGTTTTTCACTTTGGAAACT+TGG	-	chr1_3:62338517-62338536	None:intergenic	30.0%
	GGTAGTTCCTGAAAAATTAA+TGG	-	chr1_3:62338751-62338770	None:intergenic	30.0%
!!!	TGATATGAGTTGCTTTTTAG+AGG	+	chr1_3:62339035-62339054	Msa0131480:CDS	30.0%
	TTGTGTTATGTGAGAAACAG+AGG	-	chr1_3:62337521-62337540	None:intergenic	35.0%
!	CTGTTTCTCACATAACACAA+TGG	+	chr1_3:62337521-62337540	Msa0131480:exon	35.0%
	TGTGAATGGGAACATGAATT+GGG	-	chr1_3:62337590-62337609	None:intergenic	35.0%
!	TTTGATAGCATGGTGTGAAT+GGG	-	chr1_3:62337603-62337622	None:intergenic	35.0%
!	TGTAGTAGAGTTTGATAGCA+TGG	-	chr1_3:62337613-62337632	None:intergenic	35.0%
	AATATTGAGAAGCTGGTGAA+GGG	-	chr1_3:62337680-62337699	None:intergenic	35.0%
	CAACATCATTAAGTTCTTGC+AGG	+	chr1_3:62337875-62337894	Msa0131480:CDS	35.0%
!!!	GTTTTAGGGGAACAAAATCA+TGG	+	chr1_3:62338132-62338151	Msa0131480:intron	35.0%
!	AAAGGAGCATACCTAATTGA+TGG	+	chr1_3:62338188-62338207	Msa0131480:intron	35.0%
!	AAGGAGCATACCTAATTGAT+GGG	+	chr1_3:62338189-62338208	Msa0131480:intron	35.0%
!!	ATGCATAGCTTTGATGTGTT+AGG	-	chr1_3:62338242-62338261	None:intergenic	35.0%
!	ATAATTAGGTGCCCACATTT+TGG	+	chr1_3:62338444-62338463	Msa0131480:intron	35.0%
	TGTCTAACGATTATGGTCAA+TGG	+	chr1_3:62338480-62338499	Msa0131480:intron	35.0%
	GTCTAACGATTATGGTCAAT+GGG	+	chr1_3:62338481-62338500	Msa0131480:intron	35.0%
	TCTAACGATTATGGTCAATG+GGG	+	chr1_3:62338482-62338501	Msa0131480:intron	35.0%
!	TGCACTCAAGTTTTTCACTT+TGG	-	chr1_3:62338525-62338544	None:intergenic	35.0%
	TGGTTTATGAAGCAAATGCT+AGG	+	chr1_3:62338803-62338822	Msa0131480:CDS	35.0%
	ATGAAGCAAATGCTAGGATA+AGG	+	chr1_3:62338809-62338828	Msa0131480:CDS	35.0%
	TGAAGCAAATGCTAGGATAA+GGG	+	chr1_3:62338810-62338829	Msa0131480:CDS	35.0%
	TTGCCAACAAGCAAATTTAG+TGG	+	chr1_3:62338936-62338955	Msa0131480:CDS	35.0%
!	TTTAGTGGCACTAATTTGCA+TGG	+	chr1_3:62338951-62338970	Msa0131480:CDS	35.0%
	TTAATCATCATGTCATGGTC+TGG	-	chr1_3:62338997-62339016	None:intergenic	35.0%
	GCTGATTAATCATCATGTCA+TGG	-	chr1_3:62339002-62339021	None:intergenic	35.0%
	ACTCATATCAACATGAGGTT+GGG	-	chr1_3:62339025-62339044	None:intergenic	35.0%
	AACTCATATCAACATGAGGT+TGG	-	chr1_3:62339026-62339045	None:intergenic	35.0%
	AAGCAACTCATATCAACATG+AGG	-	chr1_3:62339030-62339049	None:intergenic	35.0%
	CTTAATTTCCAAACTCCAAG+TGG	+	chr1_3:62339213-62339232	Msa0131480:three_prime_UTR	35.0%
	TTGTGTTATGTGAGAAACAG+AGG	-	chr1_3:62337521-62337540	None:intergenic	35.0%
!	CTGTTTCTCACATAACACAA+TGG	+	chr1_3:62337521-62337540	Msa0131480:exon	35.0%
	TGTGAATGGGAACATGAATT+GGG	-	chr1_3:62337590-62337609	None:intergenic	35.0%
!	TTTGATAGCATGGTGTGAAT+GGG	-	chr1_3:62337603-62337622	None:intergenic	35.0%
!	TGTAGTAGAGTTTGATAGCA+TGG	-	chr1_3:62337613-62337632	None:intergenic	35.0%
	AATATTGAGAAGCTGGTGAA+GGG	-	chr1_3:62337680-62337699	None:intergenic	35.0%
	CAACATCATTAAGTTCTTGC+AGG	+	chr1_3:62337875-62337894	Msa0131480:CDS	35.0%
!!!	GTTTTAGGGGAACAAAATCA+TGG	+	chr1_3:62338132-62338151	Msa0131480:intron	35.0%
!	AAAGGAGCATACCTAATTGA+TGG	+	chr1_3:62338188-62338207	Msa0131480:intron	35.0%
!	AAGGAGCATACCTAATTGAT+GGG	+	chr1_3:62338189-62338208	Msa0131480:intron	35.0%
!!	ATGCATAGCTTTGATGTGTT+AGG	-	chr1_3:62338242-62338261	None:intergenic	35.0%
!	ATAATTAGGTGCCCACATTT+TGG	+	chr1_3:62338444-62338463	Msa0131480:intron	35.0%
	TGTCTAACGATTATGGTCAA+TGG	+	chr1_3:62338480-62338499	Msa0131480:intron	35.0%
	GTCTAACGATTATGGTCAAT+GGG	+	chr1_3:62338481-62338500	Msa0131480:intron	35.0%
	TCTAACGATTATGGTCAATG+GGG	+	chr1_3:62338482-62338501	Msa0131480:intron	35.0%
!	TGCACTCAAGTTTTTCACTT+TGG	-	chr1_3:62338525-62338544	None:intergenic	35.0%
	TGGTTTATGAAGCAAATGCT+AGG	+	chr1_3:62338803-62338822	Msa0131480:CDS	35.0%
	ATGAAGCAAATGCTAGGATA+AGG	+	chr1_3:62338809-62338828	Msa0131480:CDS	35.0%
	TGAAGCAAATGCTAGGATAA+GGG	+	chr1_3:62338810-62338829	Msa0131480:CDS	35.0%
	TTGCCAACAAGCAAATTTAG+TGG	+	chr1_3:62338936-62338955	Msa0131480:CDS	35.0%
!	TTTAGTGGCACTAATTTGCA+TGG	+	chr1_3:62338951-62338970	Msa0131480:CDS	35.0%
	TTAATCATCATGTCATGGTC+TGG	-	chr1_3:62338997-62339016	None:intergenic	35.0%
	GCTGATTAATCATCATGTCA+TGG	-	chr1_3:62339002-62339021	None:intergenic	35.0%
	ACTCATATCAACATGAGGTT+GGG	-	chr1_3:62339025-62339044	None:intergenic	35.0%
	AACTCATATCAACATGAGGT+TGG	-	chr1_3:62339026-62339045	None:intergenic	35.0%
	AAGCAACTCATATCAACATG+AGG	-	chr1_3:62339030-62339049	None:intergenic	35.0%
	CTTAATTTCCAAACTCCAAG+TGG	+	chr1_3:62339213-62339232	Msa0131480:three_prime_UTR	35.0%
	AGAAACAGAGGAAAACAGAG+AGG	-	chr1_3:62337509-62337528	None:intergenic	40.0%
!	TGAATTGGGATTGGTAGATG+AGG	-	chr1_3:62337576-62337595	None:intergenic	40.0%
	ATGGGAACATGAATTGGGAT+TGG	-	chr1_3:62337585-62337604	None:intergenic	40.0%
	GTGTGAATGGGAACATGAAT+TGG	-	chr1_3:62337591-62337610	None:intergenic	40.0%
!	GTTTGATAGCATGGTGTGAA+TGG	-	chr1_3:62337604-62337623	None:intergenic	40.0%
!	AAAGGTGTGGGAGATTGTAA+AGG	-	chr1_3:62337657-62337676	None:intergenic	40.0%
	GAATATTGAGAAGCTGGTGA+AGG	-	chr1_3:62337681-62337700	None:intergenic	40.0%
	TTCTCAATATTCTCCTCCCT+CGG	+	chr1_3:62337689-62337708	Msa0131480:CDS	40.0%
!!	CTAACAATAATTGGTGGTGG+AGG	-	chr1_3:62337735-62337754	None:intergenic	40.0%
	CAAGGGCTAACAATAATTGG+TGG	-	chr1_3:62337741-62337760	None:intergenic	40.0%
	GCACAAGGGCTAACAATAAT+TGG	-	chr1_3:62337744-62337763	None:intergenic	40.0%
	GGATCAGTTGGAGGAAAATA+CGG	-	chr1_3:62337816-62337835	None:intergenic	40.0%
	ACCATTGCTCATAGAGTCTT+TGG	+	chr1_3:62337846-62337865	Msa0131480:CDS	40.0%
	TCCAAAGACTCTATGAGCAA+TGG	-	chr1_3:62337850-62337869	None:intergenic	40.0%
	ACTGGTCATAGTCACAAACA+AGG	-	chr1_3:62338042-62338061	None:intergenic	40.0%
!	GGGAACAAAATCATGGGTTT+TGG	+	chr1_3:62338139-62338158	Msa0131480:intron	40.0%
!!	CATGGGTTTTGGTCAAAAAG+TGG	+	chr1_3:62338150-62338169	Msa0131480:intron	40.0%
!!	GGTTTTGGTCAAAAAGTGGA+TGG	+	chr1_3:62338154-62338173	Msa0131480:intron	40.0%
	ATCATGCATGCCCATCAATT+AGG	-	chr1_3:62338202-62338221	None:intergenic	40.0%
!	GTGCCACTAAATTTGCTTGT+TGG	-	chr1_3:62338942-62338961	None:intergenic	40.0%
	CTCATATCAACATGAGGTTG+GGG	-	chr1_3:62339024-62339043	None:intergenic	40.0%
!!	ACAACAATTTTGGGTCTGCT+TGG	+	chr1_3:62339058-62339077	Msa0131480:CDS	40.0%
!!	CAACAATTTTGGGTCTGCTT+GGG	+	chr1_3:62339059-62339078	Msa0131480:CDS	40.0%
	AATTTCCAAACTCCAAGTGG+AGG	+	chr1_3:62339216-62339235	Msa0131480:three_prime_UTR	40.0%
	AGAAACAGAGGAAAACAGAG+AGG	-	chr1_3:62337509-62337528	None:intergenic	40.0%
!	TGAATTGGGATTGGTAGATG+AGG	-	chr1_3:62337576-62337595	None:intergenic	40.0%
	ATGGGAACATGAATTGGGAT+TGG	-	chr1_3:62337585-62337604	None:intergenic	40.0%
	GTGTGAATGGGAACATGAAT+TGG	-	chr1_3:62337591-62337610	None:intergenic	40.0%
!	GTTTGATAGCATGGTGTGAA+TGG	-	chr1_3:62337604-62337623	None:intergenic	40.0%
!	AAAGGTGTGGGAGATTGTAA+AGG	-	chr1_3:62337657-62337676	None:intergenic	40.0%
	GAATATTGAGAAGCTGGTGA+AGG	-	chr1_3:62337681-62337700	None:intergenic	40.0%
	TTCTCAATATTCTCCTCCCT+CGG	+	chr1_3:62337689-62337708	Msa0131480:CDS	40.0%
!!	CTAACAATAATTGGTGGTGG+AGG	-	chr1_3:62337735-62337754	None:intergenic	40.0%
	CAAGGGCTAACAATAATTGG+TGG	-	chr1_3:62337741-62337760	None:intergenic	40.0%
	GCACAAGGGCTAACAATAAT+TGG	-	chr1_3:62337744-62337763	None:intergenic	40.0%
	GGATCAGTTGGAGGAAAATA+CGG	-	chr1_3:62337816-62337835	None:intergenic	40.0%
	ACCATTGCTCATAGAGTCTT+TGG	+	chr1_3:62337846-62337865	Msa0131480:CDS	40.0%
	TCCAAAGACTCTATGAGCAA+TGG	-	chr1_3:62337850-62337869	None:intergenic	40.0%
	ACTGGTCATAGTCACAAACA+AGG	-	chr1_3:62338042-62338061	None:intergenic	40.0%
!	GGGAACAAAATCATGGGTTT+TGG	+	chr1_3:62338139-62338158	Msa0131480:intron	40.0%
!!	CATGGGTTTTGGTCAAAAAG+TGG	+	chr1_3:62338150-62338169	Msa0131480:intron	40.0%
!!	GGTTTTGGTCAAAAAGTGGA+TGG	+	chr1_3:62338154-62338173	Msa0131480:intron	40.0%
	ATCATGCATGCCCATCAATT+AGG	-	chr1_3:62338202-62338221	None:intergenic	40.0%
!	GTGCCACTAAATTTGCTTGT+TGG	-	chr1_3:62338942-62338961	None:intergenic	40.0%
	CTCATATCAACATGAGGTTG+GGG	-	chr1_3:62339024-62339043	None:intergenic	40.0%
!!	ACAACAATTTTGGGTCTGCT+TGG	+	chr1_3:62339058-62339077	Msa0131480:CDS	40.0%
!!	CAACAATTTTGGGTCTGCTT+GGG	+	chr1_3:62339059-62339078	Msa0131480:CDS	40.0%
	AATTTCCAAACTCCAAGTGG+AGG	+	chr1_3:62339216-62339235	Msa0131480:three_prime_UTR	40.0%
	TAGATGAGGAGGAGAAGTAG+TGG	-	chr1_3:62337562-62337581	None:intergenic	45.0%
!	ATTGGGATTGGTAGATGAGG+AGG	-	chr1_3:62337573-62337592	None:intergenic	45.0%
	GGAGGTGAAGAAGATGAAGA+TGG	-	chr1_3:62337636-62337655	None:intergenic	45.0%
	GGAGGAGAATATTGAGAAGC+TGG	-	chr1_3:62337687-62337706	None:intergenic	45.0%
!!	ATAATTGGTGGTGGAGGAGA+TGG	-	chr1_3:62337729-62337748	None:intergenic	45.0%
	GGGCTAACAATAATTGGTGG+TGG	-	chr1_3:62337738-62337757	None:intergenic	45.0%
!	ACTTTTCAACACACCTGCGA+CGG	-	chr1_3:62337782-62337801	None:intergenic	45.0%
	AACTTGAGTGGATCAGTTGG+AGG	-	chr1_3:62337825-62337844	None:intergenic	45.0%
	GTGAACTTGAGTGGATCAGT+TGG	-	chr1_3:62337828-62337847	None:intergenic	45.0%
	TGAGCAATGGTGAACTTGAG+TGG	-	chr1_3:62337837-62337856	None:intergenic	45.0%
	AAGAGAATGTCATGCCTCGA+AGG	-	chr1_3:62338074-62338093	None:intergenic	45.0%
	TAGTGGTTACACTATGGCCA+GGG	-	chr1_3:62338404-62338423	None:intergenic	45.0%
	ATAGTGGTTACACTATGGCC+AGG	-	chr1_3:62338405-62338424	None:intergenic	45.0%
	AGGATAAGGGACCCAGTTTA+TGG	+	chr1_3:62338823-62338842	Msa0131480:CDS	45.0%
	GGATAAGGGACCCAGTTTAT+GGG	+	chr1_3:62338824-62338843	Msa0131480:CDS	45.0%
	TAGATGAGGAGGAGAAGTAG+TGG	-	chr1_3:62337562-62337581	None:intergenic	45.0%
!	ATTGGGATTGGTAGATGAGG+AGG	-	chr1_3:62337573-62337592	None:intergenic	45.0%
	GGAGGTGAAGAAGATGAAGA+TGG	-	chr1_3:62337636-62337655	None:intergenic	45.0%
	GGAGGAGAATATTGAGAAGC+TGG	-	chr1_3:62337687-62337706	None:intergenic	45.0%
!!	ATAATTGGTGGTGGAGGAGA+TGG	-	chr1_3:62337729-62337748	None:intergenic	45.0%
	GGGCTAACAATAATTGGTGG+TGG	-	chr1_3:62337738-62337757	None:intergenic	45.0%
!	ACTTTTCAACACACCTGCGA+CGG	-	chr1_3:62337782-62337801	None:intergenic	45.0%
	AACTTGAGTGGATCAGTTGG+AGG	-	chr1_3:62337825-62337844	None:intergenic	45.0%
	GTGAACTTGAGTGGATCAGT+TGG	-	chr1_3:62337828-62337847	None:intergenic	45.0%
	TGAGCAATGGTGAACTTGAG+TGG	-	chr1_3:62337837-62337856	None:intergenic	45.0%
	AAGAGAATGTCATGCCTCGA+AGG	-	chr1_3:62338074-62338093	None:intergenic	45.0%
	TAGTGGTTACACTATGGCCA+GGG	-	chr1_3:62338404-62338423	None:intergenic	45.0%
	ATAGTGGTTACACTATGGCC+AGG	-	chr1_3:62338405-62338424	None:intergenic	45.0%
	AGGATAAGGGACCCAGTTTA+TGG	+	chr1_3:62338823-62338842	Msa0131480:CDS	45.0%
	GGATAAGGGACCCAGTTTAT+GGG	+	chr1_3:62338824-62338843	Msa0131480:CDS	45.0%
	GGTGTGGGAGATTGTAAAGG+AGG	-	chr1_3:62337654-62337673	None:intergenic	50.0%
	TGAGAAGCTGGTGAAGGGAA+AGG	-	chr1_3:62337675-62337694	None:intergenic	50.0%
	GAATCTTGCAGGCAGCACAA+GGG	-	chr1_3:62337758-62337777	None:intergenic	50.0%
	AGAATCTTGCAGGCAGCACA+AGG	-	chr1_3:62337759-62337778	None:intergenic	50.0%
!	CCTCGAAGGTGTGAATGAAC+TGG	-	chr1_3:62338060-62338079	None:intergenic	50.0%
	CCAGTTCATTCACACCTTCG+AGG	+	chr1_3:62338057-62338076	Msa0131480:intron	50.0%
	CTTTCTCTCTTTAGTCCCCC+TGG	+	chr1_3:62338384-62338403	Msa0131480:intron	50.0%
	AGTGGTTACACTATGGCCAG+GGG	-	chr1_3:62338403-62338422	None:intergenic	50.0%
	CTTACTGCATCTGCTCTCTG+AGG	-	chr1_3:62338778-62338797	None:intergenic	50.0%
	AGCAGATGCAGTAAGCAGCA+TGG	+	chr1_3:62338783-62338802	Msa0131480:CDS	50.0%
	CACCTGCACACCCATAAACT+GGG	-	chr1_3:62338837-62338856	None:intergenic	50.0%
	CACTAGCTCAGCTTGTGCTT+TGG	-	chr1_3:62338908-62338927	None:intergenic	50.0%
	GTCTTCCTCCACTTGGAGTT+TGG	-	chr1_3:62339224-62339243	None:intergenic	50.0%
!	AGCTCTAGTCTTCCTCCACT+TGG	-	chr1_3:62339231-62339250	None:intergenic	50.0%
	GGTGTGGGAGATTGTAAAGG+AGG	-	chr1_3:62337654-62337673	None:intergenic	50.0%
	TGAGAAGCTGGTGAAGGGAA+AGG	-	chr1_3:62337675-62337694	None:intergenic	50.0%
	GAATCTTGCAGGCAGCACAA+GGG	-	chr1_3:62337758-62337777	None:intergenic	50.0%
	AGAATCTTGCAGGCAGCACA+AGG	-	chr1_3:62337759-62337778	None:intergenic	50.0%
!	CCTCGAAGGTGTGAATGAAC+TGG	-	chr1_3:62338060-62338079	None:intergenic	50.0%
	CCAGTTCATTCACACCTTCG+AGG	+	chr1_3:62338057-62338076	Msa0131480:intron	50.0%
	CTTTCTCTCTTTAGTCCCCC+TGG	+	chr1_3:62338384-62338403	Msa0131480:intron	50.0%
	AGTGGTTACACTATGGCCAG+GGG	-	chr1_3:62338403-62338422	None:intergenic	50.0%
	CTTACTGCATCTGCTCTCTG+AGG	-	chr1_3:62338778-62338797	None:intergenic	50.0%
	AGCAGATGCAGTAAGCAGCA+TGG	+	chr1_3:62338783-62338802	Msa0131480:CDS	50.0%
	CACCTGCACACCCATAAACT+GGG	-	chr1_3:62338837-62338856	None:intergenic	50.0%
	CACTAGCTCAGCTTGTGCTT+TGG	-	chr1_3:62338908-62338927	None:intergenic	50.0%
	GTCTTCCTCCACTTGGAGTT+TGG	-	chr1_3:62339224-62339243	None:intergenic	50.0%
!	AGCTCTAGTCTTCCTCCACT+TGG	-	chr1_3:62339231-62339250	None:intergenic	50.0%
!	GCTGGTGAAGGGAAAGGTGT+GGG	-	chr1_3:62337669-62337688	None:intergenic	55.0%
	AGCTGGTGAAGGGAAAGGTG+TGG	-	chr1_3:62337670-62337689	None:intergenic	55.0%
!	AGGAGATGGTGGTTGAGGAG+CGG	-	chr1_3:62337715-62337734	None:intergenic	55.0%
!!	ATTGGTGGTGGAGGAGATGG+TGG	-	chr1_3:62337726-62337745	None:intergenic	55.0%
	GTGGTTACACTATGGCCAGG+GGG	-	chr1_3:62338402-62338421	None:intergenic	55.0%
!!	GCATCTGCTCTCTGAGGTTC+AGG	-	chr1_3:62338772-62338791	None:intergenic	55.0%
	GACCCAGTTTATGGGTGTGC+AGG	+	chr1_3:62338832-62338851	Msa0131480:CDS	55.0%
	GCACCTGCACACCCATAAAC+TGG	-	chr1_3:62338838-62338857	None:intergenic	55.0%
!	GCTGGTGAAGGGAAAGGTGT+GGG	-	chr1_3:62337669-62337688	None:intergenic	55.0%
	AGCTGGTGAAGGGAAAGGTG+TGG	-	chr1_3:62337670-62337689	None:intergenic	55.0%
!	AGGAGATGGTGGTTGAGGAG+CGG	-	chr1_3:62337715-62337734	None:intergenic	55.0%
!!	ATTGGTGGTGGAGGAGATGG+TGG	-	chr1_3:62337726-62337745	None:intergenic	55.0%
	GTGGTTACACTATGGCCAGG+GGG	-	chr1_3:62338402-62338421	None:intergenic	55.0%
!!	GCATCTGCTCTCTGAGGTTC+AGG	-	chr1_3:62338772-62338791	None:intergenic	55.0%
	GACCCAGTTTATGGGTGTGC+AGG	+	chr1_3:62338832-62338851	Msa0131480:CDS	55.0%
	GCACCTGCACACCCATAAAC+TGG	-	chr1_3:62338838-62338857	None:intergenic	55.0%
!	GGTGGAGGAGATGGTGGTTG+AGG	-	chr1_3:62337720-62337739	None:intergenic	60.0%
	CCTGCGACGGAGAATCTTGC+AGG	-	chr1_3:62337769-62337788	None:intergenic	60.0%
	CCTGCAAGATTCTCCGTCGC+AGG	+	chr1_3:62337766-62337785	Msa0131480:CDS	60.0%
	GGTCTGCTTGGGAGCCTCTT+TGG	+	chr1_3:62339070-62339089	Msa0131480:CDS	60.0%
!	GGTGGAGGAGATGGTGGTTG+AGG	-	chr1_3:62337720-62337739	None:intergenic	60.0%
	CCTGCGACGGAGAATCTTGC+AGG	-	chr1_3:62337769-62337788	None:intergenic	60.0%
	CCTGCAAGATTCTCCGTCGC+AGG	+	chr1_3:62337766-62337785	Msa0131480:CDS	60.0%
	GGTCTGCTTGGGAGCCTCTT+TGG	+	chr1_3:62339070-62339089	Msa0131480:CDS	60.0%
	GGTGGTTGAGGAGCGGCCGA+GGG	-	chr1_3:62337708-62337727	None:intergenic	70.0%
	TGGTGGTTGAGGAGCGGCCG+AGG	-	chr1_3:62337709-62337728	None:intergenic	70.0%
	GGTGGTTGAGGAGCGGCCGA+GGG	-	chr1_3:62337708-62337727	None:intergenic	70.0%
	TGGTGGTTGAGGAGCGGCCG+AGG	-	chr1_3:62337709-62337728	None:intergenic	70.0%
	GGTTGAGGAGCGGCCGAGGG+AGG	-	chr1_3:62337705-62337724	None:intergenic	75.0%
	GGTTGAGGAGCGGCCGAGGG+AGG	-	chr1_3:62337705-62337724	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_3	gene	62337467	62339264	62337467	ID=Msa0131480;Name=Msa0131480
chr1_3	mRNA	62337467	62339264	62337467	ID=Msa0131480-mRNA-1;Parent=Msa0131480;Name=Msa0131480-mRNA-1;_AED=0.03;_eAED=0.03;_QI=73\|1\|1\|1\|1\|1\|2\|166\|230
chr1_3	exon	62337467	62337896	62337467	ID=Msa0131480-mRNA-1:exon:20740;Parent=Msa0131480-mRNA-1
chr1_3	exon	62338763	62339264	62338763	ID=Msa0131480-mRNA-1:exon:20741;Parent=Msa0131480-mRNA-1
chr1_3	five_prime_UTR	62337467	62337539	62337467	ID=Msa0131480-mRNA-1:five_prime_utr;Parent=Msa0131480-mRNA-1
chr1_3	CDS	62337540	62337896	62337540	ID=Msa0131480-mRNA-1:cds;Parent=Msa0131480-mRNA-1
chr1_3	CDS	62338763	62339098	62338763	ID=Msa0131480-mRNA-1:cds;Parent=Msa0131480-mRNA-1
chr1_3	three_prime_UTR	62339099	62339264	62339099	ID=Msa0131480-mRNA-1:three_prime_utr;Parent=Msa0131480-mRNA-1

Gene Sequence

>Msa0131480

ATGGAACACAAAATGAAAACCACTACTTCTCCTCCTCATCTACCAATCCCAATTCATGTTCCCATTCACACCATGCTATCAAACTCTACTACACCATCTTCATCTTCTTCACCTCCTTTACAATCTCCCACACCTTTCCCTTCACCAGCTTCTCAATATTCTCCTCCCTCGGCCGCTCCTCAACCACCATCTCCTCCACCACCAATTATTGTTAGCCCTTGTGCTGCCTGCAAGATTCTCCGTCGCAGGTGTGTTGAAAAGTGTGTGTTAGCTCCGTATTTTCCTCCAACTGATCCACTCAAGTTCACCATTGCTCATAGAGTCTTTGGAGCTAGCAACATCATTAAGTTCTTGCAGGAACTACCTGAACCTCAGAGAGCAGATGCAGTAAGCAGCATGGTTTATGAAGCAAATGCTAGGATAAGGGACCCAGTTTATGGGTGTGCAGGTGCAATATGTCAACTTCAAAAACAAGTTAGTGAGTTACAAACACAGCTAGCCAAAGCACAAGCTGAGCTAGTGAACATGCATTGCCAACAAGCAAATTTAGTGGCACTAATTTGCATGGAAATGAGTACTCAGTCATCACCAGACCATGACATGATGATTAATCAGCCCCAACCTCATGTTGATATGAGTTGCTTTTTAGAGGACAACAATTTTGGGTCTGCTTGGGAGCCTCTTTGGACATGA

Protein sequence

>Msa0131480

MEHKMKTTTSPPHLPIPIHVPIHTMLSNSTTPSSSSSPPLQSPTPFPSPASQYSPPSAAPQPPSPPPPIIVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPEPQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQTQLAKAQAELVNMHCQQANLVALICMEMSTQSSPDHDMMINQPQPHVDMSCFLEDNNFGSAWEPLWT*