AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0132580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0132580 MtrunA17_Chr1g0201911 96.303 568 18 1 1 568 1 565 0.0 1135
Msa0132580 MtrunA17_Chr1g0201941 45.757 601 205 15 3 500 2 584 3.62e-152 451
Msa0132580 MtrunA17_Chr6g0463941 53.472 288 113 3 52 318 52 339 3.60e-72 243
Msa0132580 MtrunA17_Chr6g0463941 62.879 132 43 2 363 491 449 577 6.30e-46 171
Msa0132580 MtrunA17_Chr6g0463941 43.617 94 52 1 51 143 460 553 7.54e-19 90.5
Msa0132580 MtrunA17_Chr6g0463941 41.379 87 50 1 375 461 55 140 5.88e-17 84.3
Msa0132580 MtrunA17_Chr1g0198171 30.118 425 222 13 36 432 95 472 2.67e-47 172
Msa0132580 MtrunA17_Chr1g0198171 47.525 101 51 2 367 466 106 205 2.18e-19 91.7
Msa0132580 MtrunA17_Chr2g0290511 37.860 243 123 4 241 463 116 350 5.81e-44 160
Msa0132580 MtrunA17_Chr2g0290511 39.091 110 59 2 54 162 261 363 3.83e-16 80.5
Msa0132580 MtrunA17_Chr7g0265831 37.818 275 153 5 46 317 107 366 2.69e-42 158
Msa0132580 MtrunA17_Chr7g0265831 41.463 123 60 4 368 479 108 229 1.79e-19 91.7
Msa0132580 MtrunA17_Chr1g0179191 34.014 294 162 6 55 343 131 397 1.52e-40 154
Msa0132580 MtrunA17_Chr1g0179191 42.202 109 61 2 364 471 120 227 3.21e-20 94.0
Msa0132580 MtrunA17_Chr1g0190851 33.582 268 127 6 239 464 251 509 1.56e-33 134
Msa0132580 MtrunA17_Chr1g0190851 40.426 94 53 2 53 143 416 509 3.59e-14 75.5
Msa0132580 MtrunA17_Chr7g0273941 31.174 247 142 7 240 465 241 480 2.32e-29 121
Msa0132580 MtrunA17_Chr7g0273941 43.434 99 46 2 55 143 381 479 3.46e-16 81.3
Msa0132580 MtrunA17_Chr5g0409071 30.075 133 81 3 335 465 10 132 1.02e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0132580 AT1G76890.2 49.393 494 180 11 50 496 36 506 1.91e-141 421
Msa0132580 AT1G76880.1 51.975 481 195 8 50 497 56 533 1.64e-135 407
Msa0132580 AT5G03680.1 33.882 425 237 12 55 462 119 516 2.71e-60 210
Msa0132580 AT5G28300.1 37.838 259 127 6 240 464 300 558 4.58e-40 154
Msa0132580 AT3G10000.1 33.544 316 182 8 12 323 56 347 6.89e-38 146
Msa0132580 AT3G10000.1 35.915 142 81 3 343 477 53 191 7.86e-21 96.3
Msa0132580 AT1G33240.3 68.132 91 29 0 375 465 435 525 1.14e-37 147
Msa0132580 AT1G33240.2 68.132 91 29 0 375 465 396 486 1.23e-37 147
Msa0132580 AT1G33240.2 43.678 87 48 1 55 140 396 482 1.71e-16 83.2
Msa0132580 AT1G33240.1 68.132 91 29 0 375 465 435 525 2.42e-37 147
Msa0132580 AT3G10000.2 32.381 315 177 8 12 323 56 337 3.94e-34 135
Msa0132580 AT3G10000.2 34.043 141 75 3 343 477 53 181 8.91e-18 86.7
Msa0132580 AT5G47660.1 31.278 227 141 4 238 463 177 389 5.83e-26 110
Msa0132580 AT5G47660.1 41.304 92 51 2 55 145 303 392 3.97e-13 72.0
Msa0132580 AT3G25990.1 32.000 100 67 1 376 474 55 154 6.59e-11 64.7

Find 157 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATAGTTGCTTTGCTTTGC+TGG 0.158924 1_3:+63718587 None:intergenic
AGTATAGAAAGAAGAGAAAA+TGG 0.189121 1_3:-63720114 Msa0132580:CDS
GAACCAAAGTATCAAGAAAA+TGG 0.192524 1_3:-63719635 Msa0132580:CDS
TTATTATTTGGTTGTGGTTT+TGG 0.205052 1_3:+63720358 None:intergenic
GAAAATGGAAGGACTATTTC+AGG 0.211748 1_3:-63720099 Msa0132580:CDS
ATTCTATGATCTCACGAAAT+TGG 0.233898 1_3:+63718929 None:intergenic
TTCATGTTTAGCAAAGAATT+TGG 0.243790 1_3:+63720205 None:intergenic
GGAGGTCTCCATTGTTGTTC+TGG 0.263104 1_3:+63719332 None:intergenic
TCTTCCCACAATGGTGCTTT+TGG 0.285818 1_3:+63719611 None:intergenic
GAATTTCAAAATATGAATAA+TGG 0.294434 1_3:-63719749 Msa0132580:CDS
GAGCTGCTGATGATCTTTCT+TGG 0.298176 1_3:+63719924 None:intergenic
GTGAAGTTCATGCTCTAATA+AGG 0.301161 1_3:-63719673 Msa0132580:CDS
TGAAAATAGTCATATATTAA+AGG 0.303423 1_3:-63718839 Msa0132580:three_prime_UTR
GCTTCAAGTTCATTAAAATA+AGG 0.305695 1_3:+63719452 None:intergenic
GATGAGAGTGTGTTATTATT+TGG 0.316885 1_3:+63720346 None:intergenic
TCAAGAGAGCCAATGTTTCT+TGG 0.332675 1_3:+63721434 None:intergenic
TATGTATGTTCATGTTCATA+TGG 0.338357 1_3:-63718736 Msa0132580:three_prime_UTR
TTAACGGTGGTGGAGGAAAT+AGG 0.356278 1_3:-63721465 Msa0132580:CDS
AACTTCTTCTTCCACAGCTT+CGG 0.361209 1_3:-63720155 Msa0132580:CDS
GAAACGAATTAGAACCAAAA+AGG 0.368019 1_3:+63719399 None:intergenic
TATTGTTTGTGTGGTTTCAT+TGG 0.368826 1_3:+63720309 None:intergenic
CTTGAAGATAAGATCAGATA+TGG 0.382626 1_3:-63721416 Msa0132580:CDS
GCTGGCGGTGGTTGTGGTGG+TGG 0.395680 1_3:+63719854 None:intergenic
AAGTCTTAAGGGTCCACTTT+GGG 0.401378 1_3:-63721374 Msa0132580:CDS
TCTGGTGCTGGCGGTGGTTG+TGG 0.405288 1_3:+63719848 None:intergenic
AACGAATGTGGTAGGGTTTG+TGG 0.409596 1_3:+63720261 None:intergenic
TGAGAATATTGTGCCGGTTA+CGG 0.409713 1_3:-63721563 Msa0132580:CDS
GAAGAGAAAGGAAGAGAGAT+TGG 0.412336 1_3:-63721520 Msa0132580:CDS
CACAGCTTCGGACGAAGACT+TGG 0.417011 1_3:-63720143 Msa0132580:CDS
TTCAAAATCTAAGTTTCTAC+AGG 0.417696 1_3:+63719015 None:intergenic
TGTTCTGGCTGCACCATCAA+TGG 0.420164 1_3:+63719347 None:intergenic
ATTGTTTGTGTGGTTTCATT+GGG 0.421975 1_3:+63720310 None:intergenic
ATGAATAATGGTTACAAAAG+TGG 0.422836 1_3:-63719737 Msa0132580:CDS
GTTTCATTGGGATTTATTGT+TGG 0.423348 1_3:+63720322 None:intergenic
TGCTTTGAGAATTCAAGAAA+TGG 0.425606 1_3:-63719978 Msa0132580:CDS
ATGTATGTTCATGTTCATAT+GGG 0.431852 1_3:-63718735 Msa0132580:three_prime_UTR
AATTCAACAATGTTGTTGTT+TGG 0.432386 1_3:+63719767 None:intergenic
TTTGGAACATTGTTGTTGTT+AGG 0.434536 1_3:+63720223 None:intergenic
CACTTTGGGAAGAGGTTTCA+AGG 0.436137 1_3:-63721360 Msa0132580:intron
GATACAATAGGAATGCAAAA+AGG 0.443697 1_3:-63719562 Msa0132580:CDS
AAGTAGATCATTGGAGTTGT+GGG 0.443877 1_3:-63718672 Msa0132580:three_prime_UTR
CGCCAGCACCAGAGCTGTCT+CGG 0.443956 1_3:-63719838 Msa0132580:CDS
AACAAATAAACTTTCATCAA+TGG 0.444317 1_3:-63719138 Msa0132580:CDS
GACAGCTCTGGTGCTGGCGG+TGG 0.444859 1_3:+63719842 None:intergenic
AAGTTGTTGTGGTTGAGAAT+AGG 0.446298 1_3:+63720179 None:intergenic
AACCAAAGTATCAAGAAAAT+GGG 0.447699 1_3:-63719634 Msa0132580:CDS
ACAATACATTCTGAAAATCA+TGG 0.449937 1_3:-63718705 Msa0132580:three_prime_UTR
TGAAGAGACAAGGATACAAT+AGG 0.451641 1_3:-63719574 Msa0132580:CDS
AAGATAAGGAAGTTTCTGAT+TGG 0.457266 1_3:-63719098 Msa0132580:three_prime_UTR
ATCAATATTAACGGTGGTGG+AGG 0.457605 1_3:-63721472 Msa0132580:CDS
GTGCTTCTCCTTCTCCATCA+AGG 0.462199 1_3:-63719706 Msa0132580:CDS
GAGAGCCAATGTTTCTTGGC+GGG 0.464598 1_3:+63721438 None:intergenic
AATGGTTACAAAAGTGGTAA+TGG 0.466799 1_3:-63719731 Msa0132580:CDS
CCAGCTTAAAAGTAGATCAT+TGG 0.469891 1_3:-63718681 Msa0132580:three_prime_UTR
CACCGAGACAGCTCTGGTGC+TGG 0.472655 1_3:+63719836 None:intergenic
TAAGGGTCCACTTTGGGAAG+AGG 0.472903 1_3:-63721368 Msa0132580:CDS
GTCTCGGTGTCAGACAGCTC+TGG 0.477102 1_3:-63719822 Msa0132580:CDS
TTTCGTGATTCAAGTCTTAA+GGG 0.478392 1_3:-63721385 Msa0132580:CDS
AAGATGAATATCAATATTAA+CGG 0.478883 1_3:-63721481 Msa0132580:CDS
GCAAAGCAAAGCAACTATAG+TGG 0.483892 1_3:-63718584 Msa0132580:three_prime_UTR
ACATTGTTGTTGTTAGGTTG+TGG 0.486612 1_3:+63720229 None:intergenic
AGGAAGAGAGATTGGTGGTG+AGG 0.490326 1_3:-63721512 Msa0132580:CDS
ACTGCAAATGTAGAGGATCT+AGG 0.493018 1_3:+63719049 None:intergenic
TGAGACGATGGAGCCATTGA+TGG 0.495814 1_3:-63719360 Msa0132580:CDS
CAAGTCTTAAGGGTCCACTT+TGG 0.495967 1_3:-63721375 Msa0132580:CDS
ATCTTCTTCTATATGCAGCT+TGG 0.501249 1_3:-63721619 Msa0132580:exon
GGTGCTGGCGGTGGTTGTGG+TGG 0.502284 1_3:+63719851 None:intergenic
CATCATTAAAGTTGTGGAGG+TGG 0.503616 1_3:-63718406 Msa0132580:three_prime_UTR
GTCTGACACCGAGACAGCTC+TGG 0.505511 1_3:+63719830 None:intergenic
AATATCAATATTAACGGTGG+TGG 0.506001 1_3:-63721475 Msa0132580:CDS
CCCTCTTCAAATGTAGTTGG+AGG 0.507603 1_3:+63719314 None:intergenic
AAGCTGTATAATAGCTAGGT+AGG 0.507798 1_3:-63721649 Msa0132580:five_prime_UTR
TGTAGGAAACTAGCTGAACT+TGG 0.509833 1_3:-63720544 Msa0132580:intron
TAGAAAGAAGAGAAAATGGA+AGG 0.520671 1_3:-63720110 Msa0132580:CDS
GAAGGAGAAACGAATGTGGT+AGG 0.521206 1_3:+63720253 None:intergenic
GTACCCTCTTCAAATGTAGT+TGG 0.522241 1_3:+63719311 None:intergenic
TGGGCCAAAAGCACCATTGT+GGG 0.525939 1_3:-63719615 Msa0132580:CDS
AGGGTTTGTGGATGGAACAG+TGG 0.526949 1_3:+63720273 None:intergenic
CAAGTCTTCGTCCGAAGCTG+TGG 0.529430 1_3:+63720144 None:intergenic
AGTTATCATCATTAAAGTTG+TGG 0.529698 1_3:-63718412 Msa0132580:three_prime_UTR
GATAGCATGGAAGAAGATGA+AGG 0.531181 1_3:-63719191 Msa0132580:CDS
AGTGTGTTATTATTTGGTTG+TGG 0.532548 1_3:+63720352 None:intergenic
GACATATGATATTGTTTGTG+TGG 0.533682 1_3:+63720300 None:intergenic
GTGCCGGTTACGGCGCAAAA+CGG 0.534516 1_3:-63721553 Msa0132580:CDS
ATAGTATACTCTCAACTCAA+AGG 0.534719 1_3:+63721724 None:intergenic
ATTAAAGTTGTGGAGGTGGA+TGG 0.534789 1_3:-63718402 Msa0132580:three_prime_UTR
ACGGCGCAAAACGGAGGCGG+CGG 0.535961 1_3:-63721544 Msa0132580:CDS
TAGTATACTCTCAACTCAAA+GGG 0.536928 1_3:+63721725 None:intergenic
TTTGGCCACCTTGATGGAGA+AGG 0.538200 1_3:+63719698 None:intergenic
TATCACAAAAGAACCAAAGA+AGG 0.539271 1_3:-63720469 Msa0132580:CDS
CTCCGGTGAGAATATTGTGC+CGG 0.540412 1_3:-63721569 Msa0132580:CDS
CAAAATGAAATTGAAATACA+TGG 0.542258 1_3:+63718348 None:intergenic
ATATGAAGATGGAGATAGCA+TGG 0.544034 1_3:-63719204 Msa0132580:CDS
AGAGCCAATGTTTCTTGGCG+GGG 0.547860 1_3:+63721439 None:intergenic
TTGTTGTCACAACTTCATAA+CGG 0.553559 1_3:+63719156 None:intergenic
CTTGAAACCTCTTCCCAAAG+TGG 0.553632 1_3:+63721361 None:intergenic
GGTAGGAGTGGAAAATCAGA+AGG 0.553996 1_3:-63720448 Msa0132580:CDS
TGGTGATGCAACAGTAATGA+TGG 0.554542 1_3:-63721599 Msa0132580:CDS
GAGAAAGGAAGAGAGATTGG+TGG 0.555860 1_3:-63721517 Msa0132580:CDS
AAAGTAGATCATTGGAGTTG+TGG 0.557615 1_3:-63718673 Msa0132580:three_prime_UTR
TTGTTGTTAGGTTGTGGTGA+AGG 0.559792 1_3:+63720235 None:intergenic
TTTAAATCTAAAAGTTCCTA+CGG 0.559809 1_3:-63718979 Msa0132580:three_prime_UTR
GGAGGCGGCGGTGAAGAGAA+AGG 0.561124 1_3:-63721532 Msa0132580:CDS
TAGCTATTATACAGCTTGAG+AGG 0.561313 1_3:+63721655 None:intergenic
ATGTTGTTAAACAGTTCACA+TGG 0.563077 1_3:-63718611 Msa0132580:three_prime_UTR
GTTACGGCGCAAAACGGAGG+CGG 0.565758 1_3:-63721547 Msa0132580:CDS
AACATGGATGAATATGAAGA+TGG 0.566553 1_3:-63719215 Msa0132580:CDS
ACTTTAATGATGATAACTAA+AGG 0.570189 1_3:+63718417 None:intergenic
CAGTTGTATGAGACAAGATA+AGG 0.570962 1_3:-63719112 Msa0132580:exon
AGAAGAAGTTGAAGTTGTTG+TGG 0.571331 1_3:+63720168 None:intergenic
AAGGAGAAACGAATGTGGTA+GGG 0.571339 1_3:+63720254 None:intergenic
CGCATTGAGATGCTTTCATG+AGG 0.572412 1_3:+63721759 None:intergenic
CGAGACAGCTCTGGTGCTGG+CGG 0.574522 1_3:+63719839 None:intergenic
TCTCAAGCTGTATAATAGCT+AGG 0.574638 1_3:-63721653 Msa0132580:five_prime_UTR
CAATACATTCTGAAAATCAT+GGG 0.575043 1_3:-63718704 Msa0132580:three_prime_UTR
AGCTGTATAATAGCTAGGTA+GGG 0.575558 1_3:-63721648 Msa0132580:five_prime_UTR
AGAGAGCCAATGTTTCTTGG+CGG 0.579042 1_3:+63721437 None:intergenic
CAAATACTACAAGAAAATGA+AGG 0.579174 1_3:-63719513 Msa0132580:CDS
TGAAGGAAAGTAACAAGCAA+AGG 0.584180 1_3:-63719496 Msa0132580:CDS
TAACACATCTGAAGCAGTAG+AGG 0.584767 1_3:-63718954 Msa0132580:three_prime_UTR
GTGGCCCCGCCAAGAAACAT+TGG 0.588347 1_3:-63721443 Msa0132580:CDS
ATGGGCCAAAAGCACCATTG+TGG 0.595427 1_3:-63719616 Msa0132580:CDS
TGATGAAGAAGATGAAAACA+TGG 0.596066 1_3:-63719231 Msa0132580:CDS
AGAACCAAAGAAGGTAGGAG+TGG 0.596126 1_3:-63720460 Msa0132580:CDS
ACCTCCAACTACATTTGAAG+AGG 0.596492 1_3:-63719315 Msa0132580:CDS
AAGATAAGATCAGATATGGA+TGG 0.598844 1_3:-63721412 Msa0132580:CDS
TATCATCATTAAAGTTGTGG+AGG 0.601827 1_3:-63718409 Msa0132580:three_prime_UTR
ACAAGTGCTTGCAAAACAAG+AGG 0.605374 1_3:-63720065 Msa0132580:CDS
GTAATGATGGAGACTTGCTC+CGG 0.605776 1_3:-63721586 Msa0132580:CDS
TAGAAGCTCAAAGAAGTGCA+AGG 0.606310 1_3:-63720515 Msa0132580:CDS
ACAAAAGAACCAAAGAAGGT+AGG 0.608634 1_3:-63720465 Msa0132580:CDS
CTTCAGATGTGTTATACCGT+AGG 0.617936 1_3:+63718963 None:intergenic
AACCGGCACAATATTCTCAC+CGG 0.619642 1_3:+63721567 None:intergenic
AGCTATTATACAGCTTGAGA+GGG 0.625032 1_3:+63721656 None:intergenic
TGGTGCAGCCAGAACAACAA+TGG 0.627830 1_3:-63719340 Msa0132580:CDS
CCGGTTACGGCGCAAAACGG+AGG 0.631559 1_3:-63721550 Msa0132580:CDS
AAAGGCATACCACAAACACC+TGG 0.637596 1_3:-63718821 Msa0132580:three_prime_UTR
GCAAAAGAAGAAGATGACAA+TGG 0.642786 1_3:-63719263 Msa0132580:CDS
CATGAGATCAAATGAGACGA+TGG 0.644421 1_3:-63719372 Msa0132580:CDS
AGCATGGAAGAAGATGAAGG+AGG 0.648293 1_3:-63719188 Msa0132580:CDS
ATGAATATCAATATTAACGG+TGG 0.649447 1_3:-63721478 Msa0132580:CDS
ACACGATACTGCAAATGTAG+AGG 0.650015 1_3:+63719042 None:intergenic
CCTCCAACTACATTTGAAGA+GGG 0.651540 1_3:-63719314 Msa0132580:CDS
CTATAGTGGAATGAGATGAG+AGG 0.660095 1_3:-63718570 Msa0132580:three_prime_UTR
TACATTTGAAGAGGGTACTG+TGG 0.663962 1_3:-63719306 Msa0132580:CDS
GGTTACAAAAGTGGTAATGG+TGG 0.667767 1_3:-63719728 Msa0132580:CDS
GCTGAAATATCTTCCCACAA+TGG 0.669344 1_3:+63719602 None:intergenic
AATGTGGTAGGGTTTGTGGA+TGG 0.673197 1_3:+63720265 None:intergenic
CTTCTCCTTCTCCATCAAGG+TGG 0.673995 1_3:-63719703 Msa0132580:CDS
TCTCTGATCTCAGTTCATGA+CGG 0.674317 1_3:+63718638 None:intergenic
TCAGCTGCAATGAAGAGACA+AGG 0.690286 1_3:-63719584 Msa0132580:CDS
TGTTGTTAAACAGTTCACAT+GGG 0.695788 1_3:-63718610 Msa0132580:three_prime_UTR
AATGAAATTGAAATACATGG+TGG 0.699700 1_3:+63718351 None:intergenic
GCATTGAGATGCTTTCATGA+GGG 0.706051 1_3:+63721760 None:intergenic
ATAAGTTGAATATGACAGAG+AGG 0.711331 1_3:-63718498 Msa0132580:three_prime_UTR
TGGTGAAGGAGAAACGAATG+TGG 0.713404 1_3:+63720249 None:intergenic
ACGGTGGTGGAGGAAATAGG+TGG 0.747281 1_3:-63721462 Msa0132580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGGTTAATAAAATTATATA+TGG + chr1_3:63719154-63719173 None:intergenic 10.0%
!! TTAAACTTAAGTAATTTAAT+TGG + chr1_3:63719173-63719192 None:intergenic 10.0%
!!! ATATGTGTTTTTTTTTTTTT+TGG - chr1_3:63719312-63719331 Msa0132580:CDS 10.0%
!! AAAAAAAATCATCTAATATT+GGG + chr1_3:63721625-63721644 None:intergenic 10.0%
!! AAAAAAAAATCATCTAATAT+TGG + chr1_3:63721626-63721645 None:intergenic 10.0%
!! AAGATGAATATCAATATTAA+CGG - chr1_3:63718615-63718634 Msa0132580:three_prime_UTR 15.0%
!! ACAAAGTAATAAAAATTAGA+TGG + chr1_3:63719242-63719261 None:intergenic 15.0%
!! TAATTGATCAAAAAATCTAT+AGG + chr1_3:63719679-63719698 None:intergenic 15.0%
!! GAATTTCAAAATATGAATAA+TGG - chr1_3:63720347-63720366 Msa0132580:CDS 15.0%
!!! TTTAAATTATTTTGTGCATT+TGG - chr1_3:63721206-63721225 Msa0132580:intron 15.0%
!!! TTAAATTATTTTGTGCATTT+GGG - chr1_3:63721207-63721226 Msa0132580:intron 15.0%
!! TGAAAATAGTCATATATTAA+AGG - chr1_3:63721257-63721276 Msa0132580:intron 15.0%
!! CTTATAAACAAGAAAATGAA+AGG + chr1_3:63718837-63718856 None:intergenic 20.0%
!!! TTTTTTTTTTCCTTCTGAAA+AGG - chr1_3:63718974-63718993 Msa0132580:three_prime_UTR 20.0%
!! AGTAATAAAAATTAGATGGA+AGG + chr1_3:63719238-63719257 None:intergenic 20.0%
!!! TTTGTGTGTTTCTTATTTAT+TGG - chr1_3:63719257-63719276 Msa0132580:CDS 20.0%
!! AAAAGTAAAAATTTGTGATG+AGG + chr1_3:63719381-63719400 None:intergenic 20.0%
!!! TTTTACTTTTTTTACGTGAA+AGG - chr1_3:63719391-63719410 Msa0132580:CDS 20.0%
!!! TTTTTCTTTTCCTTTTTCAA+TGG - chr1_3:63719422-63719441 Msa0132580:CDS 20.0%
!! TACATGTATGTATATATAGA+GGG + chr1_3:63719536-63719555 None:intergenic 20.0%
!! AACAAATAAACTTTCATCAA+TGG - chr1_3:63720958-63720977 Msa0132580:intron 20.0%
!! TTTAAATCTAAAAGTTCCTA+CGG - chr1_3:63721117-63721136 Msa0132580:intron 20.0%
!!! ATAATGATGCTTTTTCAAAT+GGG + chr1_3:63721343-63721362 None:intergenic 20.0%
!! ACTTTAATGATGATAACTAA+AGG + chr1_3:63721682-63721701 None:intergenic 20.0%
!! CAAAATGAAATTGAAATACA+TGG + chr1_3:63721751-63721770 None:intergenic 20.0%
! GATCAGAAAAAATAAACAAG+AGG + chr1_3:63718409-63718428 None:intergenic 25.0%
! ATGAATATCAATATTAACGG+TGG - chr1_3:63718618-63718637 Msa0132580:three_prime_UTR 25.0%
!! CAAAAACTGATTGGTTAATT+TGG + chr1_3:63718900-63718919 None:intergenic 25.0%
!! CAAATTAACCAATCAGTTTT+TGG - chr1_3:63718898-63718917 Msa0132580:three_prime_UTR 25.0%
!!! CATCTTCTTCAACTTTTTTT+AGG - chr1_3:63719202-63719221 Msa0132580:CDS 25.0%
!! TATTTATTGGTCACTCTTTT+AGG - chr1_3:63719270-63719289 Msa0132580:CDS 25.0%
! AAAAAACACATATTGAAGCT+AGG + chr1_3:63719305-63719324 None:intergenic 25.0%
! GTTAGTATATCCATTGAAAA+AGG + chr1_3:63719435-63719454 None:intergenic 25.0%
! CTACATGTATGTATATATAG+AGG + chr1_3:63719537-63719556 None:intergenic 25.0%
! CTCTATATATACATACATGT+AGG - chr1_3:63719535-63719554 Msa0132580:CDS 25.0%
!! TTATTATTTGGTTGTGGTTT+TGG + chr1_3:63719741-63719760 None:intergenic 25.0%
! TTCATGTTTAGCAAAGAATT+TGG + chr1_3:63719894-63719913 None:intergenic 25.0%
! AGTATAGAAAGAAGAGAAAA+TGG - chr1_3:63719982-63720001 Msa0132580:CDS 25.0%
!! AATTCAACAATGTTGTTGTT+TGG + chr1_3:63720332-63720351 None:intergenic 25.0%
! ATGAATAATGGTTACAAAAG+TGG - chr1_3:63720359-63720378 Msa0132580:CDS 25.0%
!! AACCAAAGTATCAAGAAAAT+GGG - chr1_3:63720462-63720481 Msa0132580:CDS 25.0%
!! AAAAAGGTGCAAAGAAAAAT+GGG - chr1_3:63720550-63720569 Msa0132580:intron 25.0%
! CAAATACTACAAGAAAATGA+AGG - chr1_3:63720583-63720602 Msa0132580:intron 25.0%
!! GCTTCAAGTTCATTAAAATA+AGG + chr1_3:63720647-63720666 None:intergenic 25.0%
! TTCAAAATCTAAGTTTCTAC+AGG + chr1_3:63721084-63721103 None:intergenic 25.0%
!! GAGATCATAGAATTTTCTTT+TGG - chr1_3:63721177-63721196 Msa0132580:intron 25.0%
!! AAATTGAATTTTTATGGTCC+AGG + chr1_3:63721296-63721315 None:intergenic 25.0%
!!! CATAATGATGCTTTTTCAAA+TGG + chr1_3:63721344-63721363 None:intergenic 25.0%
! TATGTATGTTCATGTTCATA+TGG - chr1_3:63721360-63721379 Msa0132580:intron 25.0%
! ATGTATGTTCATGTTCATAT+GGG - chr1_3:63721361-63721380 Msa0132580:CDS 25.0%
!! ACAATACATTCTGAAAATCA+TGG - chr1_3:63721391-63721410 Msa0132580:CDS 25.0%
!! CAATACATTCTGAAAATCAT+GGG - chr1_3:63721392-63721411 Msa0132580:CDS 25.0%
! AGTTATCATCATTAAAGTTG+TGG - chr1_3:63721684-63721703 Msa0132580:five_prime_UTR 25.0%
! AATGAAATTGAAATACATGG+TGG + chr1_3:63721748-63721767 None:intergenic 25.0%
TAGTATACTCTCAACTCAAA+GGG + chr1_3:63718374-63718393 None:intergenic 30.0%
ATAGTATACTCTCAACTCAA+AGG + chr1_3:63718375-63718394 None:intergenic 30.0%
AATATCAATATTAACGGTGG+TGG - chr1_3:63718621-63718640 Msa0132580:three_prime_UTR 30.0%
CTTGAAGATAAGATCAGATA+TGG - chr1_3:63718680-63718699 Msa0132580:three_prime_UTR 30.0%
AAGATAAGATCAGATATGGA+TGG - chr1_3:63718684-63718703 Msa0132580:three_prime_UTR 30.0%
! TTTTCGTGATTCAAGTCTTA+AGG - chr1_3:63718710-63718729 Msa0132580:three_prime_UTR 30.0%
TTTCGTGATTCAAGTCTTAA+GGG - chr1_3:63718711-63718730 Msa0132580:three_prime_UTR 30.0%
AATAGGTTCCAAAAACTGAT+TGG + chr1_3:63718909-63718928 None:intergenic 30.0%
GTCAAAAAAAGCTCTTTGAT+TGG - chr1_3:63718946-63718965 Msa0132580:three_prime_UTR 30.0%
! AAGATATATGCCTTTTCAGA+AGG + chr1_3:63718987-63719006 None:intergenic 30.0%
ATCTTATTCTCAAGTGTATG+AGG - chr1_3:63719002-63719021 Msa0132580:three_prime_UTR 30.0%
ATGTATATATAGAGGGATCA+CGG + chr1_3:63719529-63719548 None:intergenic 30.0%
TATCACAAAAGAACCAAAGA+AGG - chr1_3:63719627-63719646 Msa0132580:CDS 30.0%
! AGTGTGTTATTATTTGGTTG+TGG + chr1_3:63719747-63719766 None:intergenic 30.0%
! GATGAGAGTGTGTTATTATT+TGG + chr1_3:63719753-63719772 None:intergenic 30.0%
GTTTCATTGGGATTTATTGT+TGG + chr1_3:63719777-63719796 None:intergenic 30.0%
ATTGTTTGTGTGGTTTCATT+GGG + chr1_3:63719789-63719808 None:intergenic 30.0%
TATTGTTTGTGTGGTTTCAT+TGG + chr1_3:63719790-63719809 None:intergenic 30.0%
GACATATGATATTGTTTGTG+TGG + chr1_3:63719799-63719818 None:intergenic 30.0%
! TTTGGAACATTGTTGTTGTT+AGG + chr1_3:63719876-63719895 None:intergenic 30.0%
TAGAAAGAAGAGAAAATGGA+AGG - chr1_3:63719986-63720005 Msa0132580:CDS 30.0%
!! TTCTTTTTCACGTTTGTCTA+TGG + chr1_3:63720081-63720100 None:intergenic 30.0%
!! TGCTTTGAGAATTCAAGAAA+TGG - chr1_3:63720118-63720137 Msa0132580:CDS 30.0%
AATGGTTACAAAAGTGGTAA+TGG - chr1_3:63720365-63720384 Msa0132580:CDS 30.0%
! GAACCAAAGTATCAAGAAAA+TGG - chr1_3:63720461-63720480 Msa0132580:CDS 30.0%
GATACAATAGGAATGCAAAA+AGG - chr1_3:63720534-63720553 Msa0132580:CDS 30.0%
! CAAAAAGGTGCAAAGAAAAA+TGG - chr1_3:63720549-63720568 Msa0132580:intron 30.0%
! AACAAAACACAGAACCTTTT+TGG - chr1_3:63720683-63720702 Msa0132580:intron 30.0%
GAAACGAATTAGAACCAAAA+AGG + chr1_3:63720700-63720719 None:intergenic 30.0%
TGATGAAGAAGATGAAAACA+TGG - chr1_3:63720865-63720884 Msa0132580:intron 30.0%
AACATGGATGAATATGAAGA+TGG - chr1_3:63720881-63720900 Msa0132580:intron 30.0%
TTGTTGTCACAACTTCATAA+CGG + chr1_3:63720943-63720962 None:intergenic 30.0%
AAGATAAGGAAGTTTCTGAT+TGG - chr1_3:63720998-63721017 Msa0132580:intron 30.0%
ATTCTATGATCTCACGAAAT+TGG + chr1_3:63721170-63721189 None:intergenic 30.0%
ATGTTGTTAAACAGTTCACA+TGG - chr1_3:63721485-63721504 Msa0132580:CDS 30.0%
TGTTGTTAAACAGTTCACAT+GGG - chr1_3:63721486-63721505 Msa0132580:CDS 30.0%
! ATAAGTTGAATATGACAGAG+AGG - chr1_3:63721598-63721617 Msa0132580:CDS 30.0%
TATCATCATTAAAGTTGTGG+AGG - chr1_3:63721687-63721706 Msa0132580:five_prime_UTR 30.0%
AGCTATTATACAGCTTGAGA+GGG + chr1_3:63718443-63718462 None:intergenic 35.0%
TAGCTATTATACAGCTTGAG+AGG + chr1_3:63718444-63718463 None:intergenic 35.0%
TCTCAAGCTGTATAATAGCT+AGG - chr1_3:63718443-63718462 Msa0132580:three_prime_UTR 35.0%
AAGCTGTATAATAGCTAGGT+AGG - chr1_3:63718447-63718466 Msa0132580:three_prime_UTR 35.0%
AGCTGTATAATAGCTAGGTA+GGG - chr1_3:63718448-63718467 Msa0132580:three_prime_UTR 35.0%
ATCTTCTTCTATATGCAGCT+TGG - chr1_3:63718477-63718496 Msa0132580:three_prime_UTR 35.0%
TTCTTCTATCTGAATCTTGC+TGG - chr1_3:63719093-63719112 Msa0132580:three_prime_UTR 35.0%
ACAAAAGAACCAAAGAAGGT+AGG - chr1_3:63719631-63719650 Msa0132580:CDS 35.0%
!!! TATTTGGTTGTGGTTTTGGA+TGG + chr1_3:63719737-63719756 None:intergenic 35.0%
! ACATTGTTGTTGTTAGGTTG+TGG + chr1_3:63719870-63719889 None:intergenic 35.0%
AAGTTGTTGTGGTTGAGAAT+AGG + chr1_3:63719920-63719939 None:intergenic 35.0%
AGAAGAAGTTGAAGTTGTTG+TGG + chr1_3:63719931-63719950 None:intergenic 35.0%
GAAAATGGAAGGACTATTTC+AGG - chr1_3:63719997-63720016 Msa0132580:CDS 35.0%
GCATTTCTCCAAAAATTGTC+TGG - chr1_3:63720215-63720234 Msa0132580:CDS 35.0%
!! AGAGCATGAACTTCACTTTT+TGG + chr1_3:63720419-63720438 None:intergenic 35.0%
GTGAAGTTCATGCTCTAATA+AGG - chr1_3:63720423-63720442 Msa0132580:CDS 35.0%
TGAAGAGACAAGGATACAAT+AGG - chr1_3:63720522-63720541 Msa0132580:CDS 35.0%
TGAAGGAAAGTAACAAGCAA+AGG - chr1_3:63720600-63720619 Msa0132580:intron 35.0%
GCAAAAGAAGAAGATGACAA+TGG - chr1_3:63720833-63720852 Msa0132580:intron 35.0%
ATATGAAGATGGAGATAGCA+TGG - chr1_3:63720892-63720911 Msa0132580:intron 35.0%
CAGTTGTATGAGACAAGATA+AGG - chr1_3:63720984-63721003 Msa0132580:intron 35.0%
!! CCAATGATCTACTTTTAAGC+TGG + chr1_3:63721418-63721437 None:intergenic 35.0%
CCAGCTTAAAAGTAGATCAT+TGG - chr1_3:63721415-63721434 Msa0132580:CDS 35.0%
AAAGTAGATCATTGGAGTTG+TGG - chr1_3:63721423-63721442 Msa0132580:CDS 35.0%
AAGTAGATCATTGGAGTTGT+GGG - chr1_3:63721424-63721443 Msa0132580:CDS 35.0%
GCATTGAGATGCTTTCATGA+GGG + chr1_3:63718339-63718358 None:intergenic 40.0%
! TGGTGATGCAACAGTAATGA+TGG - chr1_3:63718497-63718516 Msa0132580:three_prime_UTR 40.0%
!! TGAGAATATTGTGCCGGTTA+CGG - chr1_3:63718533-63718552 Msa0132580:three_prime_UTR 40.0%
GAAGAGAAAGGAAGAGAGAT+TGG - chr1_3:63718576-63718595 Msa0132580:three_prime_UTR 40.0%
! ATCAATATTAACGGTGGTGG+AGG - chr1_3:63718624-63718643 Msa0132580:three_prime_UTR 40.0%
TCAAGAGAGCCAATGTTTCT+TGG + chr1_3:63718665-63718684 None:intergenic 40.0%
AAGTCTTAAGGGTCCACTTT+GGG - chr1_3:63718722-63718741 Msa0132580:three_prime_UTR 40.0%
TAGTTCCACTGACAGGAAAT+AGG + chr1_3:63718926-63718945 None:intergenic 40.0%
!! TTTTGACTAGTTCCACTGAC+AGG + chr1_3:63718933-63718952 None:intergenic 40.0%
TGTAGGAAACTAGCTGAACT+TGG - chr1_3:63719552-63719571 Msa0132580:CDS 40.0%
! TAGAAGCTCAAAGAAGTGCA+AGG - chr1_3:63719581-63719600 Msa0132580:CDS 40.0%
! TTTTCCACTCCTACCTTCTT+TGG + chr1_3:63719643-63719662 None:intergenic 40.0%
!!! TTGTGGTTTTGGATGGTAAG+AGG + chr1_3:63719730-63719749 None:intergenic 40.0%
AAGGAGAAACGAATGTGGTA+GGG + chr1_3:63719845-63719864 None:intergenic 40.0%
! TTGTTGTTAGGTTGTGGTGA+AGG + chr1_3:63719864-63719883 None:intergenic 40.0%
AACTTCTTCTTCCACAGCTT+CGG - chr1_3:63719941-63719960 Msa0132580:CDS 40.0%
ACAAGTGCTTGCAAAACAAG+AGG - chr1_3:63720031-63720050 Msa0132580:CDS 40.0%
!! GGTTACAAAAGTGGTAATGG+TGG - chr1_3:63720368-63720387 Msa0132580:CDS 40.0%
! GGCCCATTTTCTTGATACTT+TGG + chr1_3:63720467-63720486 None:intergenic 40.0%
GCTGAAATATCTTCCCACAA+TGG + chr1_3:63720497-63720516 None:intergenic 40.0%
CATGAGATCAAATGAGACGA+TGG - chr1_3:63720724-63720743 Msa0132580:intron 40.0%
ACCTCCAACTACATTTGAAG+AGG - chr1_3:63720781-63720800 Msa0132580:intron 40.0%
CCTCCAACTACATTTGAAGA+GGG - chr1_3:63720782-63720801 Msa0132580:intron 40.0%
GTACCCTCTTCAAATGTAGT+TGG + chr1_3:63720788-63720807 None:intergenic 40.0%
!! TACATTTGAAGAGGGTACTG+TGG - chr1_3:63720790-63720809 Msa0132580:intron 40.0%
GATAGCATGGAAGAAGATGA+AGG - chr1_3:63720905-63720924 Msa0132580:intron 40.0%
ACTGCAAATGTAGAGGATCT+AGG + chr1_3:63721050-63721069 None:intergenic 40.0%
ACACGATACTGCAAATGTAG+AGG + chr1_3:63721057-63721076 None:intergenic 40.0%
CTTCAGATGTGTTATACCGT+AGG + chr1_3:63721136-63721155 None:intergenic 40.0%
! TAACACATCTGAAGCAGTAG+AGG - chr1_3:63721142-63721161 Msa0132580:intron 40.0%
! TTTTATGGTCCAGGTGTTTG+TGG + chr1_3:63721287-63721306 None:intergenic 40.0%
TCTCTGATCTCAGTTCATGA+CGG + chr1_3:63721461-63721480 None:intergenic 40.0%
! CTATAGTTGCTTTGCTTTGC+TGG + chr1_3:63721512-63721531 None:intergenic 40.0%
GCAAAGCAAAGCAACTATAG+TGG - chr1_3:63721512-63721531 Msa0132580:CDS 40.0%
! CTATAGTGGAATGAGATGAG+AGG - chr1_3:63721526-63721545 Msa0132580:CDS 40.0%
CATCATTAAAGTTGTGGAGG+TGG - chr1_3:63721690-63721709 Msa0132580:five_prime_UTR 40.0%
ATTAAAGTTGTGGAGGTGGA+TGG - chr1_3:63721694-63721713 Msa0132580:five_prime_UTR 40.0%
CGCATTGAGATGCTTTCATG+AGG + chr1_3:63718340-63718359 None:intergenic 45.0%
! GTAATGATGGAGACTTGCTC+CGG - chr1_3:63718510-63718529 Msa0132580:three_prime_UTR 45.0%
AACCGGCACAATATTCTCAC+CGG + chr1_3:63718532-63718551 None:intergenic 45.0%
GAGAAAGGAAGAGAGATTGG+TGG - chr1_3:63718579-63718598 Msa0132580:three_prime_UTR 45.0%
!! TTAACGGTGGTGGAGGAAAT+AGG - chr1_3:63718631-63718650 Msa0132580:three_prime_UTR 45.0%
AGAGAGCCAATGTTTCTTGG+CGG + chr1_3:63718662-63718681 None:intergenic 45.0%
CAAGTCTTAAGGGTCCACTT+TGG - chr1_3:63718721-63718740 Msa0132580:three_prime_UTR 45.0%
CTTGAAACCTCTTCCCAAAG+TGG + chr1_3:63718738-63718757 None:intergenic 45.0%
! CACTTTGGGAAGAGGTTTCA+AGG - chr1_3:63718736-63718755 Msa0132580:three_prime_UTR 45.0%
TGGAACCTATTTCCTGTCAG+TGG - chr1_3:63718918-63718937 Msa0132580:three_prime_UTR 45.0%
TATAGAGGGATCACGGAAAG+TGG + chr1_3:63719522-63719541 None:intergenic 45.0%
AGAACCAAAGAAGGTAGGAG+TGG - chr1_3:63719636-63719655 Msa0132580:CDS 45.0%
GGTAGGAGTGGAAAATCAGA+AGG - chr1_3:63719648-63719667 Msa0132580:CDS 45.0%
AATGTGGTAGGGTTTGTGGA+TGG + chr1_3:63719834-63719853 None:intergenic 45.0%
AACGAATGTGGTAGGGTTTG+TGG + chr1_3:63719838-63719857 None:intergenic 45.0%
GAAGGAGAAACGAATGTGGT+AGG + chr1_3:63719846-63719865 None:intergenic 45.0%
TGGTGAAGGAGAAACGAATG+TGG + chr1_3:63719850-63719869 None:intergenic 45.0%
GAGCTGCTGATGATCTTTCT+TGG + chr1_3:63720175-63720194 None:intergenic 45.0%
! GTGGCTGTCCAGACAATTTT+TGG + chr1_3:63720226-63720245 None:intergenic 45.0%
!!! TCACTTTTTGGCCACCTTGA+TGG + chr1_3:63720407-63720426 None:intergenic 45.0%
! TCTTCCCACAATGGTGCTTT+TGG + chr1_3:63720488-63720507 None:intergenic 45.0%
TCAGCTGCAATGAAGAGACA+AGG - chr1_3:63720512-63720531 Msa0132580:CDS 45.0%
CCCTCTTCAAATGTAGTTGG+AGG + chr1_3:63720785-63720804 None:intergenic 45.0%
AGCATGGAAGAAGATGAAGG+AGG - chr1_3:63720908-63720927 Msa0132580:intron 45.0%
! AAAGGCATACCACAAACACC+TGG - chr1_3:63721275-63721294 Msa0132580:intron 45.0%
!!! AAAAATAAATTGAATTTTTA+TGG + chr1_3:63721302-63721321 None:intergenic 5.0%
!!! ATTTTTTTCTTTTTAAATTA+TGG - chr1_3:63721316-63721335 Msa0132580:intron 5.0%
CTCCGGTGAGAATATTGTGC+CGG - chr1_3:63718527-63718546 Msa0132580:three_prime_UTR 50.0%
!! AGGAAGAGAGATTGGTGGTG+AGG - chr1_3:63718584-63718603 Msa0132580:three_prime_UTR 50.0%
AGAGCCAATGTTTCTTGGCG+GGG + chr1_3:63718660-63718679 None:intergenic 50.0%
GAGAGCCAATGTTTCTTGGC+GGG + chr1_3:63718661-63718680 None:intergenic 50.0%
! TAAGGGTCCACTTTGGGAAG+AGG - chr1_3:63718728-63718747 Msa0132580:three_prime_UTR 50.0%
AAGTGGAGGAGACAGAAAGG+AGG + chr1_3:63719505-63719524 None:intergenic 50.0%
GGAAAGTGGAGGAGACAGAA+AGG + chr1_3:63719508-63719527 None:intergenic 50.0%
AGGGTTTGTGGATGGAACAG+TGG + chr1_3:63719826-63719845 None:intergenic 50.0%
GTGCTTCTCCTTCTCCATCA+AGG - chr1_3:63720390-63720409 Msa0132580:CDS 50.0%
CTTCTCCTTCTCCATCAAGG+TGG - chr1_3:63720393-63720412 Msa0132580:CDS 50.0%
TTTGGCCACCTTGATGGAGA+AGG + chr1_3:63720401-63720420 None:intergenic 50.0%
!! ATGGGCCAAAAGCACCATTG+TGG - chr1_3:63720480-63720499 Msa0132580:CDS 50.0%
!! TGGGCCAAAAGCACCATTGT+GGG - chr1_3:63720481-63720500 Msa0132580:CDS 50.0%
TGAGACGATGGAGCCATTGA+TGG - chr1_3:63720736-63720755 Msa0132580:intron 50.0%
! TGTTCTGGCTGCACCATCAA+TGG + chr1_3:63720752-63720771 None:intergenic 50.0%
TGGTGCAGCCAGAACAACAA+TGG - chr1_3:63720756-63720775 Msa0132580:intron 50.0%
! GGAGGTCTCCATTGTTGTTC+TGG + chr1_3:63720767-63720786 None:intergenic 50.0%
!! ACGGTGGTGGAGGAAATAGG+TGG - chr1_3:63718634-63718653 Msa0132580:three_prime_UTR 55.0%
AGAGGGATCACGGAAAGTGG+AGG + chr1_3:63719519-63719538 None:intergenic 55.0%
CAAGTCTTCGTCCGAAGCTG+TGG + chr1_3:63719955-63719974 None:intergenic 55.0%
CACAGCTTCGGACGAAGACT+TGG - chr1_3:63719953-63719972 Msa0132580:CDS 55.0%
!! GTGCCGGTTACGGCGCAAAA+CGG - chr1_3:63718543-63718562 Msa0132580:three_prime_UTR 60.0%
! CCTCCGTTTTGCGCCGTAAC+CGG + chr1_3:63718549-63718568 None:intergenic 60.0%
GTTACGGCGCAAAACGGAGG+CGG - chr1_3:63718549-63718568 Msa0132580:three_prime_UTR 60.0%
GTGGCCCCGCCAAGAAACAT+TGG - chr1_3:63718653-63718672 Msa0132580:three_prime_UTR 60.0%
GTCTGACACCGAGACAGCTC+TGG + chr1_3:63720269-63720288 None:intergenic 60.0%
!! GTCTCGGTGTCAGACAGCTC+TGG - chr1_3:63720274-63720293 Msa0132580:CDS 60.0%
CCGGTTACGGCGCAAAACGG+AGG - chr1_3:63718546-63718565 Msa0132580:three_prime_UTR 65.0%
GGAGGCGGCGGTGAAGAGAA+AGG - chr1_3:63718564-63718583 Msa0132580:three_prime_UTR 65.0%
!! TCTGGTGCTGGCGGTGGTTG+TGG + chr1_3:63720251-63720270 None:intergenic 65.0%
! CGAGACAGCTCTGGTGCTGG+CGG + chr1_3:63720260-63720279 None:intergenic 65.0%
CGCCAGCACCAGAGCTGTCT+CGG - chr1_3:63720258-63720277 Msa0132580:CDS 65.0%
! CACCGAGACAGCTCTGGTGC+TGG + chr1_3:63720263-63720282 None:intergenic 65.0%
ACGGCGCAAAACGGAGGCGG+CGG - chr1_3:63718552-63718571 Msa0132580:three_prime_UTR 70.0%
GCTGGCGGTGGTTGTGGTGG+TGG + chr1_3:63720245-63720264 None:intergenic 70.0%
!! GGTGCTGGCGGTGGTTGTGG+TGG + chr1_3:63720248-63720267 None:intergenic 70.0%
!! GACAGCTCTGGTGCTGGCGG+TGG + chr1_3:63720257-63720276 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 63718314 63721804 63718314 ID=Msa0132580;Name=Msa0132580
chr1_3 mRNA 63718314 63721804 63718314 ID=Msa0132580-mRNA-1;Parent=Msa0132580;Name=Msa0132580-mRNA-1;_AED=0.02;_eAED=0.02;_QI=175|1|1|1|1|1|2|810|568
chr1_3 exon 63718314 63720561 63718314 ID=Msa0132580-mRNA-1:exon:21335;Parent=Msa0132580-mRNA-1
chr1_3 exon 63721361 63721804 63721361 ID=Msa0132580-mRNA-1:exon:21334;Parent=Msa0132580-mRNA-1
chr1_3 five_prime_UTR 63721630 63721804 63721630 ID=Msa0132580-mRNA-1:five_prime_utr;Parent=Msa0132580-mRNA-1
chr1_3 CDS 63721361 63721629 63721361 ID=Msa0132580-mRNA-1:cds;Parent=Msa0132580-mRNA-1
chr1_3 CDS 63719124 63720561 63719124 ID=Msa0132580-mRNA-1:cds;Parent=Msa0132580-mRNA-1
chr1_3 three_prime_UTR 63718314 63719123 63718314 ID=Msa0132580-mRNA-1:three_prime_utr;Parent=Msa0132580-mRNA-1
Gene Sequence

>Msa0132580

ATGCAGCTTGGTGATGCAACAGTAATGATGGAGACTTGCTCCGGTGAGAATATTGTGCCGGTTACGGCGCAAAACGGAGGCGGCGGTGAAGAGAAAGGAAGAGAGATTGGTGGTGAGGAAGATGATAAGATGAATATCAATATTAACGGTGGTGGAGGAAATAGGTGGCCCCGCCAAGAAACATTGGCTCTCTTGAAGATAAGATCAGATATGGATGGTGTTTTTCGTGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAGGTTTCAAGGAAACTAGCTGAACTTGGCTATCATAGAAGCTCAAAGAAGTGCAAGGAGAAATTTGAAAATGTATACAAGTATCACAAAAGAACCAAAGAAGGTAGGAGTGGAAAATCAGAAGGAAAAACCTATAGATTTTTTGATCAATTACAAGCACTTGAAAAACAACTCACATTCTCCTCTTACCATCCAAAACCACAACCAAATAATAACACACTCTCATCACCAACAATAAATCCCAATGAAACCACACAAACAATATCATATGTCACAACCACTGTTCCATCCACAAACCCTACCACATTCGTTTCTCCTTCACCACAACCTAACAACAACAATGTTCCAAATTCTTTGCTAAACATGAACAACCTATTCTCAACCACAACAACTTCAACTTCTTCTTCCACAGCTTCGGACGAAGACTTGGAAGAGAAGTATAGAAAGAAGAGAAAATGGAAGGACTATTTCAGGAGACTCACAAGACAAGTGCTTGCAAAACAAGAGGAAATGCAAAAGAAGTTTCTTGAAGCCATAGACAAACGTGAAAAAGAACACATTGCTCAACAAGATGCTTTGAGAATTCAAGAAATGGATAGAATCAATAAAGAACACGAACTTCTTATCCAAGAAAGATCATCAGCAGCTCAAAAAAATGCAGCTGTTATTGCATTTCTCCAAAAATTGTCTGGACAGCCACCACCACAACCACCGCCAGCACCAGAGCTGTCTCGGTGTCAGACAGCTCTGGCATCACAAGTTCAAACACAACAACTAGTGATACCAAACAACAACATTGTTGAATTTCAAAATATGAATAATGGTTACAAAAGTGGTAATGGTGGTGCTTCTCCTTCTCCATCAAGGTGGCCAAAAAGTGAAGTTCATGCTCTAATAAGGATAAGAACAAGTCTTGAACCAAAGTATCAAGAAAATGGGCCAAAAGCACCATTGTGGGAAGATATTTCAGCTGCAATGAAGAGACAAGGATACAATAGGAATGCAAAAAGGTGCAAAGAAAAATGGGAGAATATCAACAAATACTACAAGAAAATGAAGGAAAGTAACAAGCAAAGGCGTGATGATAGCAAGACATGTCCTTATTTTAATGAACTTGAAGCTATTTACAAAGAAAAGAACAAAACACAGAACCTTTTTGGTTCTAATTCGTTTCATAGCATGAGATCAAATGAGACGATGGAGCCATTGATGGTGCAGCCAGAACAACAATGGAGACCTCCAACTACATTTGAAGAGGGTACTGTGGTGAAGAAGAATGTTGATGAAGCAAAAGAAGAAGATGACAATGGTGATGTTGATGATGAAGAAGATGAAAACATGGATGAATATGAAGATGGAGATAGCATGGAAGAAGATGAAGGAGGTGTTAGTAGCCGTTATGAAGTTGTGACAACAAATAAACTTTCATCAATGGACACAGTTGTATGA
Protein sequence

>Msa0132580

MQLGDATVMMETCSGENIVPVTAQNGGGGEEKGREIGGEEDDKMNININGGGGNRWPRQETLALLKIRSDMDGVFRDSSLKGPLWEEVSRKLAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLQALEKQLTFSSYHPKPQPNNNTLSSPTINPNETTQTISYVTTTVPSTNPTTFVSPSPQPNNNNVPNSLLNMNNLFSTTTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKKFLEAIDKREKEHIAQQDALRIQEMDRINKEHELLIQERSSAAQKNAAVIAFLQKLSGQPPPQPPPAPELSRCQTALASQVQTQQLVIPNNNIVEFQNMNNGYKSGNGGASPSPSRWPKSEVHALIRIRTSLEPKYQENGPKAPLWEDISAAMKRQGYNRNAKRCKEKWENINKYYKKMKESNKQRRDDSKTCPYFNELEAIYKEKNKTQNLFGSNSFHSMRSNETMEPLMVQPEQQWRPPTTFEEGTVVKKNVDEAKEEDDNGDVDDEEDENMDEYEDGDSMEEDEGGVSSRYEVVTTNKLSSMDTVV*