AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0181990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0181990 MtrunA17_Chr1g0201911 96.479 568 17 1 1 568 1 565 0.0 1140
Msa0181990 MtrunA17_Chr1g0201941 45.923 601 204 15 3 500 2 584 6.56e-153 452
Msa0181990 MtrunA17_Chr6g0463941 54.167 288 111 3 52 318 52 339 1.20e-73 247
Msa0181990 MtrunA17_Chr6g0463941 58.642 162 61 2 363 521 449 607 2.23e-46 172
Msa0181990 MtrunA17_Chr6g0463941 43.617 94 52 1 51 143 460 553 8.02e-19 90.1
Msa0181990 MtrunA17_Chr6g0463941 41.379 87 50 1 375 461 55 140 5.25e-17 84.7
Msa0181990 MtrunA17_Chr1g0198171 29.882 425 223 13 36 432 95 472 2.46e-46 170
Msa0181990 MtrunA17_Chr1g0198171 38.129 139 81 3 329 466 71 205 4.08e-20 93.6
Msa0181990 MtrunA17_Chr2g0290511 37.860 243 123 4 241 463 116 350 1.08e-43 159
Msa0181990 MtrunA17_Chr2g0290511 39.091 110 59 2 54 162 261 363 3.76e-16 80.5
Msa0181990 MtrunA17_Chr7g0265831 37.818 275 153 5 46 317 107 366 3.29e-43 160
Msa0181990 MtrunA17_Chr7g0265831 41.463 123 60 4 368 479 108 229 1.86e-19 91.7
Msa0181990 MtrunA17_Chr1g0179191 34.014 294 162 5 55 343 131 397 3.37e-41 155
Msa0181990 MtrunA17_Chr1g0179191 42.202 109 61 2 364 471 120 227 2.93e-20 94.4
Msa0181990 MtrunA17_Chr1g0190851 33.582 268 127 6 239 464 251 509 1.29e-33 134
Msa0181990 MtrunA17_Chr1g0190851 40.426 94 53 2 53 143 416 509 3.17e-14 75.5
Msa0181990 MtrunA17_Chr7g0273941 31.174 247 142 7 240 465 241 480 3.40e-29 120
Msa0181990 MtrunA17_Chr7g0273941 43.434 99 46 2 55 143 381 479 3.55e-16 81.3
Msa0181990 MtrunA17_Chr5g0409071 29.323 133 82 3 335 465 10 132 3.09e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0181990 AT1G76890.2 49.797 492 181 10 50 496 36 506 2.39e-142 424
Msa0181990 AT1G76880.1 52.183 481 194 8 50 497 56 533 2.52e-137 412
Msa0181990 AT5G03680.1 34.038 426 235 12 55 462 119 516 5.96e-60 209
Msa0181990 AT5G28300.1 38.224 259 126 6 240 464 300 558 2.33e-40 155
Msa0181990 AT3G10000.1 32.239 335 161 10 12 323 56 347 1.24e-38 148
Msa0181990 AT3G10000.1 35.915 142 81 3 343 477 53 191 5.52e-21 96.7
Msa0181990 AT1G33240.3 68.132 91 29 0 375 465 435 525 1.03e-37 147
Msa0181990 AT1G33240.2 68.132 91 29 0 375 465 396 486 1.31e-37 147
Msa0181990 AT1G33240.2 43.678 87 48 1 55 140 396 482 1.82e-16 83.2
Msa0181990 AT1G33240.1 68.132 91 29 0 375 465 435 525 2.26e-37 147
Msa0181990 AT3G10000.2 31.138 334 156 10 12 323 56 337 6.72e-35 137
Msa0181990 AT3G10000.2 34.043 141 75 3 343 477 53 181 6.51e-18 87.0
Msa0181990 AT5G47660.1 31.718 227 140 4 238 463 177 389 1.78e-27 115
Msa0181990 AT5G47660.1 41.304 92 51 2 55 145 303 392 4.15e-13 71.6
Msa0181990 AT3G25990.1 32.000 100 67 1 376 474 55 154 5.77e-11 65.1

Find 158 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATAGTTGCTTTGCTTTGC+TGG 0.158924 1_4:-70369001 None:intergenic
AGTATAGAAAGAAGAGAAAA+TGG 0.189121 1_4:+70367474 Msa0181990:CDS
GAACCAAAGTATCAAGAAAA+TGG 0.192524 1_4:+70367953 Msa0181990:CDS
TTCATGTTTGGCATAGAATT+TGG 0.199868 1_4:-70367383 None:intergenic
TTATTATTTGGTTGTGGTTT+TGG 0.205052 1_4:-70367230 None:intergenic
GAAAATGGAAGGACTATTTC+AGG 0.211748 1_4:+70367489 Msa0181990:CDS
ATTCTATGATCTCACGAAAT+TGG 0.233898 1_4:-70368659 None:intergenic
TATGTATGTTCATGTTCATC+TGG 0.252859 1_4:+70368852 Msa0181990:three_prime_UTR
GGAGGTCTCCATTGTTGTTC+TGG 0.263104 1_4:-70368256 None:intergenic
GAATTTCAAAATTTGAATAA+TGG 0.276547 1_4:+70367839 Msa0181990:CDS
TCTTCCCACAATGGCGCTTT+TGG 0.281382 1_4:-70367977 None:intergenic
GAGCTGCTGATGATCTTTCT+TGG 0.298176 1_4:-70367664 None:intergenic
GTGAAGTTCATGCTCTAATA+AGG 0.301161 1_4:+70367915 Msa0181990:CDS
TGAAAATAGTCATATATTAA+AGG 0.303423 1_4:+70368749 Msa0181990:three_prime_UTR
GCTTCAAGTTCATTAAAATA+AGG 0.305695 1_4:-70368136 None:intergenic
GATGAGAGTGTGTTATTATT+TGG 0.316885 1_4:-70367242 None:intergenic
TCAAGAGAGCCAATGTTTCT+TGG 0.332675 1_4:-70366122 None:intergenic
GAGAATAGGTTGTTCATGTT+TGG 0.356157 1_4:-70367395 None:intergenic
TTAACGGTGGTGGAGGAAAT+AGG 0.356278 1_4:+70366091 Msa0181990:CDS
AACTTCTTCTTCCACAGCTT+CGG 0.361209 1_4:+70367433 Msa0181990:CDS
GAAACGAATTAGAACCAAAA+AGG 0.368019 1_4:-70368189 None:intergenic
TATTGTTTGTGTGGTTTCAT+TGG 0.368826 1_4:-70367279 None:intergenic
CTTGAAGATAAGATCAGATA+TGG 0.382626 1_4:+70366140 Msa0181990:CDS
TTGAATAATGGTTACAAAAG+TGG 0.392274 1_4:+70367851 Msa0181990:CDS
GCTGGCGGTGGTTGTGGTGG+TGG 0.395680 1_4:-70367734 None:intergenic
GTTTCATTGGGATTTGTTGT+TGG 0.399933 1_4:-70367266 None:intergenic
AAGTCTTAAGGGTCCACTTT+GGG 0.401378 1_4:+70366182 Msa0181990:CDS
TCTGGTGCTGGCGGTGGTTG+TGG 0.405288 1_4:-70367740 None:intergenic
AACGAATGTGGTAGGGTTTG+TGG 0.409596 1_4:-70367327 None:intergenic
TGAGAATATTGTGCCGGTTA+CGG 0.409713 1_4:+70365993 Msa0181990:CDS
GAAGAGAAAGGAAGAGAGAT+TGG 0.412336 1_4:+70366036 Msa0181990:CDS
CACAGCTTCGGACGAAGACT+TGG 0.417011 1_4:+70367445 Msa0181990:CDS
TTCAAAATCTAAGTTTCTAC+AGG 0.417696 1_4:-70368573 None:intergenic
TGTTCTGGCTGCACCATCAA+TGG 0.420164 1_4:-70368241 None:intergenic
ATTGTTTGTGTGGTTTCATT+GGG 0.421975 1_4:-70367278 None:intergenic
TGCTTTGAGAATTCAAGAAA+TGG 0.425606 1_4:+70367610 Msa0181990:CDS
AATTCAACAATGTTGTTGTT+TGG 0.432386 1_4:-70367821 None:intergenic
TTTGGAACATTGTTGTTGTT+AGG 0.434536 1_4:-70367365 None:intergenic
CACTTTGGGAAGAGGTTTCA+AGG 0.436137 1_4:+70366196 Msa0181990:CDS
AAGTAGATCATTGGAGTTGT+GGG 0.443877 1_4:+70368916 Msa0181990:three_prime_UTR
AACAAATAAACTTTCATCAA+TGG 0.444317 1_4:+70368450 Msa0181990:CDS
GACAGCTCTGGTGCTGGCGG+TGG 0.444859 1_4:-70367746 None:intergenic
AAGTTGTTGTGGTTGAGAAT+AGG 0.446298 1_4:-70367409 None:intergenic
AACCAAAGTATCAAGAAAAT+GGG 0.447699 1_4:+70367954 Msa0181990:CDS
ACAATACATTCTGAAAATCA+TGG 0.449937 1_4:+70368883 Msa0181990:three_prime_UTR
TGAAGAGACAAGGATACAAT+AGG 0.451641 1_4:+70368014 Msa0181990:CDS
ATCAATATTAACGGTGGTGG+AGG 0.457605 1_4:+70366084 Msa0181990:CDS
GTGCTTCTCCTTCTCCATCA+AGG 0.462199 1_4:+70367882 Msa0181990:CDS
GAGAGCCAATGTTTCTTGGC+GGG 0.464598 1_4:-70366118 None:intergenic
AATGGTTACAAAAGTGGTAA+TGG 0.466799 1_4:+70367857 Msa0181990:CDS
CCAGCTTAAAAGTAGATCAT+TGG 0.469891 1_4:+70368907 Msa0181990:three_prime_UTR
CACGGAGACAGCTCTGGTGC+TGG 0.472655 1_4:-70367752 None:intergenic
TAAGGGTCCACTTTGGGAAG+AGG 0.472903 1_4:+70366188 Msa0181990:CDS
ATGTATGTTCATGTTCATCT+GGG 0.474894 1_4:+70368853 Msa0181990:three_prime_UTR
TTTCGTGATTCAAGTCTTAA+GGG 0.478392 1_4:+70366171 Msa0181990:CDS
AAGATGAATATCAATATTAA+CGG 0.478883 1_4:+70366075 Msa0181990:CDS
GCAAAGCAAAGCAACTATAG+TGG 0.483892 1_4:+70369004 Msa0181990:three_prime_UTR
ACATTGTTGTTGTTAGGTTG+TGG 0.486612 1_4:-70367359 None:intergenic
AAGATAAGGAAGCTTCTCAT+TGG 0.487939 1_4:+70368490 Msa0181990:three_prime_UTR
AGGAAGAGAGATTGGTGGTG+AGG 0.490326 1_4:+70366044 Msa0181990:CDS
TGAGACGATGGAGCCATTGA+TGG 0.495814 1_4:+70368228 Msa0181990:CDS
CAAGTCTTAAGGGTCCACTT+TGG 0.495967 1_4:+70366181 Msa0181990:CDS
ATCTTCTTCTATATGCAGCT+TGG 0.501249 1_4:+70365937 Msa0181990:exon
GGTGCTGGCGGTGGTTGTGG+TGG 0.502284 1_4:-70367737 None:intergenic
GCACCCTCTTCAAATGTAGT+TGG 0.502758 1_4:-70368277 None:intergenic
CATCATTAAAGTTGTGGAGG+TGG 0.503616 1_4:+70369182 Msa0181990:three_prime_UTR
GTCTGACACGGAGACAGCTC+TGG 0.505511 1_4:-70367758 None:intergenic
AATATCAATATTAACGGTGG+TGG 0.506001 1_4:+70366081 Msa0181990:CDS
CCCTCTTCAAATGTAGTTGG+AGG 0.507603 1_4:-70368274 None:intergenic
AAGCTGTATAATAGCTAGGT+AGG 0.507798 1_4:+70365907 Msa0181990:five_prime_UTR
TGTAGGAAACTAGCTGAACT+TGG 0.509833 1_4:+70367044 Msa0181990:intron
GTCTCCGTGTCAGACAGCTC+TGG 0.513072 1_4:+70367766 Msa0181990:CDS
ACTGCAAATGTAGAGGATCT+AGG 0.515315 1_4:-70368539 None:intergenic
TAGAAAGAAGAGAAAATGGA+AGG 0.520671 1_4:+70367478 Msa0181990:CDS
GAAGGAGAAACGAATGTGGT+AGG 0.521206 1_4:-70367335 None:intergenic
TGGGCCAAAAGCGCCATTGT+GGG 0.524060 1_4:+70367973 Msa0181990:CDS
AGGGTTTGTGGATGGAACAG+TGG 0.526949 1_4:-70367315 None:intergenic
CAAGTCTTCGTCCGAAGCTG+TGG 0.529430 1_4:-70367444 None:intergenic
AGTTATCATCATTAAAGTTG+TGG 0.529698 1_4:+70369176 Msa0181990:three_prime_UTR
GATAGCATGGAAGAAGATGA+AGG 0.531181 1_4:+70368397 Msa0181990:CDS
AGTGTGTTATTATTTGGTTG+TGG 0.532548 1_4:-70367236 None:intergenic
GACATATGATATTGTTTGTG+TGG 0.533682 1_4:-70367288 None:intergenic
GTGCCGGTTACGGCGCAAAA+CGG 0.534516 1_4:+70366003 Msa0181990:CDS
ATAGTATACTCTCAACTCAA+AGG 0.534719 1_4:-70365832 None:intergenic
ATTAAAGTTGTGGAGGTGGA+TGG 0.534789 1_4:+70369186 Msa0181990:three_prime_UTR
ACGGCGCAAAACGGAGGCGG+CGG 0.535961 1_4:+70366012 Msa0181990:CDS
TAGTATACTCTCAACTCAAA+GGG 0.536928 1_4:-70365831 None:intergenic
TTTGGCCACCTTGATGGAGA+AGG 0.538200 1_4:-70367890 None:intergenic
TATCACAAAAGAACCAAAGA+AGG 0.539271 1_4:+70367119 Msa0181990:CDS
CTCCGGTGAGAATATTGTGC+CGG 0.540412 1_4:+70365987 Msa0181990:CDS
CAAAATGAAATTGAAATACA+TGG 0.542258 1_4:-70369246 None:intergenic
ATATGAAGATGGAGATAGCA+TGG 0.544034 1_4:+70368384 Msa0181990:CDS
AGAGCCAATGTTTCTTGGCG+GGG 0.547860 1_4:-70366117 None:intergenic
TTGTTGTCACAACTTCATAA+CGG 0.553559 1_4:-70368432 None:intergenic
CTTGAAACCTCTTCCCAAAG+TGG 0.553632 1_4:-70366195 None:intergenic
GGTAGGAGTGGAAAATCAGA+AGG 0.553996 1_4:+70367140 Msa0181990:CDS
TGGTGATGCAACAGTAATGA+TGG 0.554542 1_4:+70365957 Msa0181990:CDS
ATGGGCCAAAAGCGCCATTG+TGG 0.554967 1_4:+70367972 Msa0181990:CDS
GAGAAAGGAAGAGAGATTGG+TGG 0.555860 1_4:+70366039 Msa0181990:CDS
AAAGTAGATCATTGGAGTTG+TGG 0.557615 1_4:+70368915 Msa0181990:three_prime_UTR
TTGTTGTTAGGTTGTGGTGA+AGG 0.559792 1_4:-70367353 None:intergenic
TTTAAATCTAAAAGTTCCTA+CGG 0.559809 1_4:+70368609 Msa0181990:three_prime_UTR
GGAGGCGGCGGTGAAGAGAA+AGG 0.561124 1_4:+70366024 Msa0181990:CDS
TAGCTATTATACAGCTTGAG+AGG 0.561313 1_4:-70365901 None:intergenic
ATGTTGTTAAACAGTTCACA+TGG 0.563077 1_4:+70368977 Msa0181990:three_prime_UTR
GTTACGGCGCAAAACGGAGG+CGG 0.565758 1_4:+70366009 Msa0181990:CDS
AACATGGATGAATATGAAGA+TGG 0.566553 1_4:+70368373 Msa0181990:CDS
ACTTTAATGATGATAACTAA+AGG 0.570189 1_4:-70369171 None:intergenic
CAGTTGTATGAGACAAGATA+AGG 0.570962 1_4:+70368476 Msa0181990:exon
AGAAGAAGTTGAAGTTGTTG+TGG 0.571331 1_4:-70367420 None:intergenic
AAGGAGAAACGAATGTGGTA+GGG 0.571339 1_4:-70367334 None:intergenic
CGCATTGAGATGCTTTCATG+AGG 0.572412 1_4:-70365797 None:intergenic
TCTCAAGCTGTATAATAGCT+AGG 0.574638 1_4:+70365903 Msa0181990:five_prime_UTR
CAATACATTCTGAAAATCAT+GGG 0.575043 1_4:+70368884 Msa0181990:three_prime_UTR
AGCTGTATAATAGCTAGGTA+GGG 0.575558 1_4:+70365908 Msa0181990:five_prime_UTR
AGAGAGCCAATGTTTCTTGG+CGG 0.579042 1_4:-70366119 None:intergenic
CAAATACTACAAGAAAATGA+AGG 0.579174 1_4:+70368075 Msa0181990:CDS
TGAAGGAAAGTAACAAGCAA+AGG 0.584180 1_4:+70368092 Msa0181990:CDS
TAACACATCTGAAGCAGTAG+AGG 0.584767 1_4:+70368634 Msa0181990:three_prime_UTR
GTGGCCCCGCCAAGAAACAT+TGG 0.588347 1_4:+70366113 Msa0181990:CDS
GGAGACAGCTCTGGTGCTGG+CGG 0.588687 1_4:-70367749 None:intergenic
GATACAATAGGAATGCGAAA+AGG 0.589387 1_4:+70368026 Msa0181990:CDS
TGATGAAGAAGATGAAAACA+TGG 0.596066 1_4:+70368357 Msa0181990:CDS
AGAACCAAAGAAGGTAGGAG+TGG 0.596126 1_4:+70367128 Msa0181990:CDS
ACCTCCAACTACATTTGAAG+AGG 0.596492 1_4:+70368273 Msa0181990:CDS
AAGATAAGATCAGATATGGA+TGG 0.598844 1_4:+70366144 Msa0181990:CDS
TATCATCATTAAAGTTGTGG+AGG 0.601827 1_4:+70369179 Msa0181990:three_prime_UTR
ACAAGTGCTTGCAAAACAAG+AGG 0.605374 1_4:+70367523 Msa0181990:CDS
GTAATGATGGAGACTTGCTC+CGG 0.605776 1_4:+70365970 Msa0181990:CDS
TAGAAGCTCAAAGAAGTGCA+AGG 0.606310 1_4:+70367073 Msa0181990:CDS
ACAAAAGAACCAAAGAAGGT+AGG 0.608634 1_4:+70367123 Msa0181990:CDS
CTTCAGATGTGTTATACCGT+AGG 0.617936 1_4:-70368625 None:intergenic
AACCGGCACAATATTCTCAC+CGG 0.619642 1_4:-70365989 None:intergenic
AGCTATTATACAGCTTGAGA+GGG 0.625032 1_4:-70365900 None:intergenic
TGGTGCAGCCAGAACAACAA+TGG 0.627830 1_4:+70368248 Msa0181990:CDS
CCGGTTACGGCGCAAAACGG+AGG 0.631559 1_4:+70366006 Msa0181990:CDS
ACACAATACTGCAAATGTAG+AGG 0.632621 1_4:-70368546 None:intergenic
AAAGGCATACCACAAACACC+TGG 0.637596 1_4:+70368767 Msa0181990:three_prime_UTR
GCAAAAGAAGAAGATGACAA+TGG 0.642786 1_4:+70368325 Msa0181990:CDS
AGCATGGAAGAAGATGAAGG+AGG 0.648293 1_4:+70368400 Msa0181990:CDS
ATGAATATCAATATTAACGG+TGG 0.649447 1_4:+70366078 Msa0181990:CDS
CTATAGTGGAATGAGATGAG+AGG 0.660095 1_4:+70369018 Msa0181990:three_prime_UTR
CATGAAGTCAAATGAGACGA+TGG 0.663039 1_4:+70368216 Msa0181990:CDS
TACATTTGAAGAGGGTGCTG+TGG 0.663974 1_4:+70368282 Msa0181990:CDS
GCTGAAATATCTTCCCACAA+TGG 0.664092 1_4:-70367986 None:intergenic
CCTCCAACTACATTTGAAGA+GGG 0.665021 1_4:+70368274 Msa0181990:CDS
GGTTACAAAAGTGGTAATGG+TGG 0.667767 1_4:+70367860 Msa0181990:CDS
AATGTGGTAGGGTTTGTGGA+TGG 0.673197 1_4:-70367323 None:intergenic
CTTCTCCTTCTCCATCAAGG+TGG 0.673995 1_4:+70367885 Msa0181990:CDS
TCTCTGATCTCAGTTCATGA+CGG 0.674317 1_4:-70368950 None:intergenic
TCAGCTGCAATGAAGAGACA+AGG 0.690286 1_4:+70368004 Msa0181990:CDS
TGTTGTTAAACAGTTCACAT+GGG 0.695788 1_4:+70368978 Msa0181990:three_prime_UTR
AATGAAATTGAAATACATGG+TGG 0.699700 1_4:-70369243 None:intergenic
GCATTGAGATGCTTTCATGA+GGG 0.706051 1_4:-70365796 None:intergenic
GATGCCAGAGCTGTCTGACA+CGG 0.707672 1_4:-70367770 None:intergenic
ATAAGTTGAATATGACAGAG+AGG 0.711331 1_4:+70369090 Msa0181990:three_prime_UTR
TGGTGAAGGAGAAACGAATG+TGG 0.713404 1_4:-70367339 None:intergenic
ACGGTGGTGGAGGAAATAGG+TGG 0.747281 1_4:+70366094 Msa0181990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CCAAAAAAAAAAATTATATA+TGG - chr1_4:70366615-70366634 None:intergenic 10.0%
!!! CCATATATAATTTTTTTTTT+TGG + chr1_4:70366612-70366631 Msa0181990:intron 10.0%
!! TTAAACTTAAGTAATTTAAT+TGG - chr1_4:70366668-70366687 None:intergenic 10.0%
!!! TGTGTTTTTTTTTTTTTTTT+TGG + chr1_4:70366807-70366826 Msa0181990:intron 10.0%
!! TAAAAAAATCATCTAATATT+GGG - chr1_4:70369117-70369136 None:intergenic 10.0%
!! TTAAAAAAATCATCTAATAT+TGG - chr1_4:70369118-70369137 None:intergenic 10.0%
!! AAGATGAATATCAATATTAA+CGG + chr1_4:70366075-70366094 Msa0181990:CDS 15.0%
!! ACAAAGTAATAAAAATTAGA+TGG - chr1_4:70366737-70366756 None:intergenic 15.0%
!! TAATTGATCAAAAAATCTAT+AGG - chr1_4:70367171-70367190 None:intergenic 15.0%
!! GAATTTCAAAATTTGAATAA+TGG + chr1_4:70367839-70367858 Msa0181990:CDS 15.0%
!!! TTTAAATTATTTTGTGCATT+TGG + chr1_4:70368698-70368717 Msa0181990:three_prime_UTR 15.0%
!!! TTAAATTATTTTGTGCATTT+GGG + chr1_4:70368699-70368718 Msa0181990:three_prime_UTR 15.0%
!! TGAAAATAGTCATATATTAA+AGG + chr1_4:70368749-70368768 Msa0181990:three_prime_UTR 15.0%
!! CTTATAAACAAGAAAATGAA+AGG - chr1_4:70366298-70366317 None:intergenic 20.0%
!!! TTTTTTTTTTCCTTCTGAAA+AGG + chr1_4:70366435-70366454 Msa0181990:intron 20.0%
!! AGTAATAAAAATTAGATGGA+AGG - chr1_4:70366733-70366752 None:intergenic 20.0%
!!! TTTGTGTGTTTCTTATTTAT+TGG + chr1_4:70366752-70366771 Msa0181990:intron 20.0%
!! AAAAGTAAAAATTTGTCATG+AGG - chr1_4:70366876-70366895 None:intergenic 20.0%
!!! TTTTACTTTTTTTACGTGAA+AGG + chr1_4:70366886-70366905 Msa0181990:intron 20.0%
!!! TTTTTCTTTTCCTTTTTCAA+TGG + chr1_4:70366917-70366936 Msa0181990:intron 20.0%
!! AACAAATAAACTTTCATCAA+TGG + chr1_4:70368450-70368469 Msa0181990:CDS 20.0%
!! TTTAAATCTAAAAGTTCCTA+CGG + chr1_4:70368609-70368628 Msa0181990:three_prime_UTR 20.0%
!!! ATAATGATGCTTTTTCAAAT+GGG - chr1_4:70368835-70368854 None:intergenic 20.0%
!! ACTTTAATGATGATAACTAA+AGG - chr1_4:70369174-70369193 None:intergenic 20.0%
!! CAAAATGAAATTGAAATACA+TGG - chr1_4:70369249-70369268 None:intergenic 20.0%
! GATCAGAAAAAATAAACAAG+AGG - chr1_4:70365869-70365888 None:intergenic 25.0%
! ATGAATATCAATATTAACGG+TGG + chr1_4:70366078-70366097 Msa0181990:CDS 25.0%
!! CAAAAACTGATTGGTTAATT+TGG - chr1_4:70366361-70366380 None:intergenic 25.0%
!! CAAATTAACCAATCAGTTTT+TGG + chr1_4:70366359-70366378 Msa0181990:intron 25.0%
!! TTCAGTTATCTTAGATTTTG+AGG + chr1_4:70366492-70366511 Msa0181990:intron 25.0%
!!! CATCTTCTTCAACTTTTTTT+AGG + chr1_4:70366697-70366716 Msa0181990:intron 25.0%
!! TATTTATTGGTCACTCTTTT+AGG + chr1_4:70366765-70366784 Msa0181990:intron 25.0%
! AAAAAAAAACACATGAAGCT+AGG - chr1_4:70366800-70366819 None:intergenic 25.0%
! GTTAGTATATCCATTGAAAA+AGG - chr1_4:70366930-70366949 None:intergenic 25.0%
! CCTACATGTATATATATAGA+GGG - chr1_4:70367030-70367049 None:intergenic 25.0%
! TCCTACATGTATATATATAG+AGG - chr1_4:70367031-70367050 None:intergenic 25.0%
!! TTATTATTTGGTTGTGGTTT+TGG - chr1_4:70367233-70367252 None:intergenic 25.0%
! AGTATAGAAAGAAGAGAAAA+TGG + chr1_4:70367474-70367493 Msa0181990:CDS 25.0%
!! AATTCAACAATGTTGTTGTT+TGG - chr1_4:70367824-70367843 None:intergenic 25.0%
! TTGAATAATGGTTACAAAAG+TGG + chr1_4:70367851-70367870 Msa0181990:CDS 25.0%
!! AACCAAAGTATCAAGAAAAT+GGG + chr1_4:70367954-70367973 Msa0181990:CDS 25.0%
! CAAATACTACAAGAAAATGA+AGG + chr1_4:70368075-70368094 Msa0181990:CDS 25.0%
!! GCTTCAAGTTCATTAAAATA+AGG - chr1_4:70368139-70368158 None:intergenic 25.0%
! TTCAAAATCTAAGTTTCTAC+AGG - chr1_4:70368576-70368595 None:intergenic 25.0%
!! GAGATCATAGAATTTTCTTT+TGG + chr1_4:70368669-70368688 Msa0181990:three_prime_UTR 25.0%
!! AAATTGAATTTTTATGGTCC+AGG - chr1_4:70368788-70368807 None:intergenic 25.0%
!!! CATAATGATGCTTTTTCAAA+TGG - chr1_4:70368836-70368855 None:intergenic 25.0%
!! ACAATACATTCTGAAAATCA+TGG + chr1_4:70368883-70368902 Msa0181990:three_prime_UTR 25.0%
!! CAATACATTCTGAAAATCAT+GGG + chr1_4:70368884-70368903 Msa0181990:three_prime_UTR 25.0%
!!! GGATGAATACATGTTATTTT+AGG + chr1_4:70369039-70369058 Msa0181990:three_prime_UTR 25.0%
! AGTTATCATCATTAAAGTTG+TGG + chr1_4:70369176-70369195 Msa0181990:three_prime_UTR 25.0%
! AATGAAATTGAAATACATGG+TGG - chr1_4:70369246-70369265 None:intergenic 25.0%
TAGTATACTCTCAACTCAAA+GGG - chr1_4:70365834-70365853 None:intergenic 30.0%
ATAGTATACTCTCAACTCAA+AGG - chr1_4:70365835-70365854 None:intergenic 30.0%
AATATCAATATTAACGGTGG+TGG + chr1_4:70366081-70366100 Msa0181990:CDS 30.0%
CTTGAAGATAAGATCAGATA+TGG + chr1_4:70366140-70366159 Msa0181990:CDS 30.0%
AAGATAAGATCAGATATGGA+TGG + chr1_4:70366144-70366163 Msa0181990:CDS 30.0%
! TTTTCGTGATTCAAGTCTTA+AGG + chr1_4:70366170-70366189 Msa0181990:CDS 30.0%
TTTCGTGATTCAAGTCTTAA+GGG + chr1_4:70366171-70366190 Msa0181990:CDS 30.0%
AATAGGTTCCAAAAACTGAT+TGG - chr1_4:70366370-70366389 None:intergenic 30.0%
GTCAAAAAAAGCTCTTTGAT+TGG + chr1_4:70366407-70366426 Msa0181990:intron 30.0%
! AAGATATATGCCTTTTCAGA+AGG - chr1_4:70366448-70366467 None:intergenic 30.0%
ATCTTATTCTCAAGTGTATG+AGG + chr1_4:70366463-70366482 Msa0181990:intron 30.0%
GTATATATATAGAGGGATCA+AGG - chr1_4:70367023-70367042 None:intergenic 30.0%
CCCTCTATATATATACATGT+AGG + chr1_4:70367027-70367046 Msa0181990:intron 30.0%
TATCACAAAAGAACCAAAGA+AGG + chr1_4:70367119-70367138 Msa0181990:CDS 30.0%
! AGTGTGTTATTATTTGGTTG+TGG - chr1_4:70367239-70367258 None:intergenic 30.0%
! GATGAGAGTGTGTTATTATT+TGG - chr1_4:70367245-70367264 None:intergenic 30.0%
ATTGTTTGTGTGGTTTCATT+GGG - chr1_4:70367281-70367300 None:intergenic 30.0%
TATTGTTTGTGTGGTTTCAT+TGG - chr1_4:70367282-70367301 None:intergenic 30.0%
GACATATGATATTGTTTGTG+TGG - chr1_4:70367291-70367310 None:intergenic 30.0%
! TTTGGAACATTGTTGTTGTT+AGG - chr1_4:70367368-70367387 None:intergenic 30.0%
TTCATGTTTGGCATAGAATT+TGG - chr1_4:70367386-70367405 None:intergenic 30.0%
TAGAAAGAAGAGAAAATGGA+AGG + chr1_4:70367478-70367497 Msa0181990:CDS 30.0%
!! TTCTTTTTCACGTTTGTCTA+TGG - chr1_4:70367573-70367592 None:intergenic 30.0%
!! TGCTTTGAGAATTCAAGAAA+TGG + chr1_4:70367610-70367629 Msa0181990:CDS 30.0%
AATGGTTACAAAAGTGGTAA+TGG + chr1_4:70367857-70367876 Msa0181990:CDS 30.0%
! GAACCAAAGTATCAAGAAAA+TGG + chr1_4:70367953-70367972 Msa0181990:CDS 30.0%
! GAAAAGGTGCAAAGAAAAAT+GGG + chr1_4:70368042-70368061 Msa0181990:CDS 30.0%
! AACAAAACACAGAACCTTTT+TGG + chr1_4:70368175-70368194 Msa0181990:CDS 30.0%
GAAACGAATTAGAACCAAAA+AGG - chr1_4:70368192-70368211 None:intergenic 30.0%
TGATGAAGAAGATGAAAACA+TGG + chr1_4:70368357-70368376 Msa0181990:CDS 30.0%
AACATGGATGAATATGAAGA+TGG + chr1_4:70368373-70368392 Msa0181990:CDS 30.0%
TTGTTGTCACAACTTCATAA+CGG - chr1_4:70368435-70368454 None:intergenic 30.0%
ATTCTATGATCTCACGAAAT+TGG - chr1_4:70368662-70368681 None:intergenic 30.0%
TATGTATGTTCATGTTCATC+TGG + chr1_4:70368852-70368871 Msa0181990:three_prime_UTR 30.0%
ATGTATGTTCATGTTCATCT+GGG + chr1_4:70368853-70368872 Msa0181990:three_prime_UTR 30.0%
ATGTTGTTAAACAGTTCACA+TGG + chr1_4:70368977-70368996 Msa0181990:three_prime_UTR 30.0%
TGTTGTTAAACAGTTCACAT+GGG + chr1_4:70368978-70368997 Msa0181990:three_prime_UTR 30.0%
! ATAAGTTGAATATGACAGAG+AGG + chr1_4:70369090-70369109 Msa0181990:three_prime_UTR 30.0%
TATCATCATTAAAGTTGTGG+AGG + chr1_4:70369179-70369198 Msa0181990:three_prime_UTR 30.0%
AGCTATTATACAGCTTGAGA+GGG - chr1_4:70365903-70365922 None:intergenic 35.0%
TAGCTATTATACAGCTTGAG+AGG - chr1_4:70365904-70365923 None:intergenic 35.0%
TCTCAAGCTGTATAATAGCT+AGG + chr1_4:70365903-70365922 Msa0181990:five_prime_UTR 35.0%
AAGCTGTATAATAGCTAGGT+AGG + chr1_4:70365907-70365926 Msa0181990:five_prime_UTR 35.0%
AGCTGTATAATAGCTAGGTA+GGG + chr1_4:70365908-70365927 Msa0181990:five_prime_UTR 35.0%
ATCTTCTTCTATATGCAGCT+TGG + chr1_4:70365937-70365956 Msa0181990:exon 35.0%
TTCTTCTATCTGAATCTTGC+TGG + chr1_4:70366554-70366573 Msa0181990:intron 35.0%
ACAAAAGAACCAAAGAAGGT+AGG + chr1_4:70367123-70367142 Msa0181990:CDS 35.0%
!!! TATTTGGTTGTGGTTTTGGA+TGG - chr1_4:70367229-70367248 None:intergenic 35.0%
!! GTTTCATTGGGATTTGTTGT+TGG - chr1_4:70367269-70367288 None:intergenic 35.0%
! ACATTGTTGTTGTTAGGTTG+TGG - chr1_4:70367362-70367381 None:intergenic 35.0%
GAGAATAGGTTGTTCATGTT+TGG - chr1_4:70367398-70367417 None:intergenic 35.0%
AAGTTGTTGTGGTTGAGAAT+AGG - chr1_4:70367412-70367431 None:intergenic 35.0%
AGAAGAAGTTGAAGTTGTTG+TGG - chr1_4:70367423-70367442 None:intergenic 35.0%
GAAAATGGAAGGACTATTTC+AGG + chr1_4:70367489-70367508 Msa0181990:CDS 35.0%
GCATTTCTCCAAAAATTGTC+TGG + chr1_4:70367707-70367726 Msa0181990:CDS 35.0%
!! AGAGCATGAACTTCACTTTT+TGG - chr1_4:70367911-70367930 None:intergenic 35.0%
GTGAAGTTCATGCTCTAATA+AGG + chr1_4:70367915-70367934 Msa0181990:CDS 35.0%
TGAAGAGACAAGGATACAAT+AGG + chr1_4:70368014-70368033 Msa0181990:CDS 35.0%
GATACAATAGGAATGCGAAA+AGG + chr1_4:70368026-70368045 Msa0181990:CDS 35.0%
! CGAAAAGGTGCAAAGAAAAA+TGG + chr1_4:70368041-70368060 Msa0181990:CDS 35.0%
TGAAGGAAAGTAACAAGCAA+AGG + chr1_4:70368092-70368111 Msa0181990:CDS 35.0%
GCAAAAGAAGAAGATGACAA+TGG + chr1_4:70368325-70368344 Msa0181990:CDS 35.0%
ATATGAAGATGGAGATAGCA+TGG + chr1_4:70368384-70368403 Msa0181990:CDS 35.0%
CAGTTGTATGAGACAAGATA+AGG + chr1_4:70368476-70368495 Msa0181990:exon 35.0%
AAGATAAGGAAGCTTCTCAT+TGG + chr1_4:70368490-70368509 Msa0181990:three_prime_UTR 35.0%
ACACAATACTGCAAATGTAG+AGG - chr1_4:70368549-70368568 None:intergenic 35.0%
!! CCAATGATCTACTTTTAAGC+TGG - chr1_4:70368910-70368929 None:intergenic 35.0%
CCAGCTTAAAAGTAGATCAT+TGG + chr1_4:70368907-70368926 Msa0181990:three_prime_UTR 35.0%
AAAGTAGATCATTGGAGTTG+TGG + chr1_4:70368915-70368934 Msa0181990:three_prime_UTR 35.0%
AAGTAGATCATTGGAGTTGT+GGG + chr1_4:70368916-70368935 Msa0181990:three_prime_UTR 35.0%
GCATTGAGATGCTTTCATGA+GGG - chr1_4:70365799-70365818 None:intergenic 40.0%
! TGGTGATGCAACAGTAATGA+TGG + chr1_4:70365957-70365976 Msa0181990:CDS 40.0%
!! TGAGAATATTGTGCCGGTTA+CGG + chr1_4:70365993-70366012 Msa0181990:CDS 40.0%
GAAGAGAAAGGAAGAGAGAT+TGG + chr1_4:70366036-70366055 Msa0181990:CDS 40.0%
! ATCAATATTAACGGTGGTGG+AGG + chr1_4:70366084-70366103 Msa0181990:CDS 40.0%
TCAAGAGAGCCAATGTTTCT+TGG - chr1_4:70366125-70366144 None:intergenic 40.0%
AAGTCTTAAGGGTCCACTTT+GGG + chr1_4:70366182-70366201 Msa0181990:CDS 40.0%
TAGTTCCACTGACAGGAAAT+AGG - chr1_4:70366387-70366406 None:intergenic 40.0%
!! TTTTGACTAGTTCCACTGAC+AGG - chr1_4:70366394-70366413 None:intergenic 40.0%
ATATAGAGGGATCAAGGAAG+TGG - chr1_4:70367017-70367036 None:intergenic 40.0%
TGTAGGAAACTAGCTGAACT+TGG + chr1_4:70367044-70367063 Msa0181990:intron 40.0%
! TAGAAGCTCAAAGAAGTGCA+AGG + chr1_4:70367073-70367092 Msa0181990:CDS 40.0%
! TTTTCCACTCCTACCTTCTT+TGG - chr1_4:70367135-70367154 None:intergenic 40.0%
!!! TTGTGGTTTTGGATGGTAAG+AGG - chr1_4:70367222-70367241 None:intergenic 40.0%
AAGGAGAAACGAATGTGGTA+GGG - chr1_4:70367337-70367356 None:intergenic 40.0%
! TTGTTGTTAGGTTGTGGTGA+AGG - chr1_4:70367356-70367375 None:intergenic 40.0%
AACTTCTTCTTCCACAGCTT+CGG + chr1_4:70367433-70367452 Msa0181990:CDS 40.0%
ACAAGTGCTTGCAAAACAAG+AGG + chr1_4:70367523-70367542 Msa0181990:CDS 40.0%
!! GGTTACAAAAGTGGTAATGG+TGG + chr1_4:70367860-70367879 Msa0181990:CDS 40.0%
! GGCCCATTTTCTTGATACTT+TGG - chr1_4:70367959-70367978 None:intergenic 40.0%
GCTGAAATATCTTCCCACAA+TGG - chr1_4:70367989-70368008 None:intergenic 40.0%
CATGAAGTCAAATGAGACGA+TGG + chr1_4:70368216-70368235 Msa0181990:CDS 40.0%
ACCTCCAACTACATTTGAAG+AGG + chr1_4:70368273-70368292 Msa0181990:CDS 40.0%
CCTCCAACTACATTTGAAGA+GGG + chr1_4:70368274-70368293 Msa0181990:CDS 40.0%
GATAGCATGGAAGAAGATGA+AGG + chr1_4:70368397-70368416 Msa0181990:CDS 40.0%
ACTGCAAATGTAGAGGATCT+AGG - chr1_4:70368542-70368561 None:intergenic 40.0%
CTTCAGATGTGTTATACCGT+AGG - chr1_4:70368628-70368647 None:intergenic 40.0%
! TAACACATCTGAAGCAGTAG+AGG + chr1_4:70368634-70368653 Msa0181990:three_prime_UTR 40.0%
! TTTTATGGTCCAGGTGTTTG+TGG - chr1_4:70368779-70368798 None:intergenic 40.0%
TCTCTGATCTCAGTTCATGA+CGG - chr1_4:70368953-70368972 None:intergenic 40.0%
! CTATAGTTGCTTTGCTTTGC+TGG - chr1_4:70369004-70369023 None:intergenic 40.0%
GCAAAGCAAAGCAACTATAG+TGG + chr1_4:70369004-70369023 Msa0181990:three_prime_UTR 40.0%
! CTATAGTGGAATGAGATGAG+AGG + chr1_4:70369018-70369037 Msa0181990:three_prime_UTR 40.0%
CATCATTAAAGTTGTGGAGG+TGG + chr1_4:70369182-70369201 Msa0181990:three_prime_UTR 40.0%
ATTAAAGTTGTGGAGGTGGA+TGG + chr1_4:70369186-70369205 Msa0181990:three_prime_UTR 40.0%
CGCATTGAGATGCTTTCATG+AGG - chr1_4:70365800-70365819 None:intergenic 45.0%
! GTAATGATGGAGACTTGCTC+CGG + chr1_4:70365970-70365989 Msa0181990:CDS 45.0%
AACCGGCACAATATTCTCAC+CGG - chr1_4:70365992-70366011 None:intergenic 45.0%
GAGAAAGGAAGAGAGATTGG+TGG + chr1_4:70366039-70366058 Msa0181990:CDS 45.0%
!! TTAACGGTGGTGGAGGAAAT+AGG + chr1_4:70366091-70366110 Msa0181990:CDS 45.0%
AGAGAGCCAATGTTTCTTGG+CGG - chr1_4:70366122-70366141 None:intergenic 45.0%
CAAGTCTTAAGGGTCCACTT+TGG + chr1_4:70366181-70366200 Msa0181990:CDS 45.0%
CTTGAAACCTCTTCCCAAAG+TGG - chr1_4:70366198-70366217 None:intergenic 45.0%
! CACTTTGGGAAGAGGTTTCA+AGG + chr1_4:70366196-70366215 Msa0181990:CDS 45.0%
TGGAACCTATTTCCTGTCAG+TGG + chr1_4:70366379-70366398 Msa0181990:intron 45.0%
AGAACCAAAGAAGGTAGGAG+TGG + chr1_4:70367128-70367147 Msa0181990:CDS 45.0%
GGTAGGAGTGGAAAATCAGA+AGG + chr1_4:70367140-70367159 Msa0181990:CDS 45.0%
AATGTGGTAGGGTTTGTGGA+TGG - chr1_4:70367326-70367345 None:intergenic 45.0%
AACGAATGTGGTAGGGTTTG+TGG - chr1_4:70367330-70367349 None:intergenic 45.0%
GAAGGAGAAACGAATGTGGT+AGG - chr1_4:70367338-70367357 None:intergenic 45.0%
TGGTGAAGGAGAAACGAATG+TGG - chr1_4:70367342-70367361 None:intergenic 45.0%
GAGCTGCTGATGATCTTTCT+TGG - chr1_4:70367667-70367686 None:intergenic 45.0%
! GTGGCTGTCCAGACAATTTT+TGG - chr1_4:70367718-70367737 None:intergenic 45.0%
!!! TCACTTTTTGGCCACCTTGA+TGG - chr1_4:70367899-70367918 None:intergenic 45.0%
TCAGCTGCAATGAAGAGACA+AGG + chr1_4:70368004-70368023 Msa0181990:CDS 45.0%
CCCTCTTCAAATGTAGTTGG+AGG - chr1_4:70368277-70368296 None:intergenic 45.0%
GCACCCTCTTCAAATGTAGT+TGG - chr1_4:70368280-70368299 None:intergenic 45.0%
!! TACATTTGAAGAGGGTGCTG+TGG + chr1_4:70368282-70368301 Msa0181990:CDS 45.0%
AGCATGGAAGAAGATGAAGG+AGG + chr1_4:70368400-70368419 Msa0181990:CDS 45.0%
! AAAGGCATACCACAAACACC+TGG + chr1_4:70368767-70368786 Msa0181990:three_prime_UTR 45.0%
!!! AAAAATAAATTGAATTTTTA+TGG - chr1_4:70368794-70368813 None:intergenic 5.0%
!!! ATTTTTTTCTTTTTAAATTA+TGG + chr1_4:70368808-70368827 Msa0181990:three_prime_UTR 5.0%
CTCCGGTGAGAATATTGTGC+CGG + chr1_4:70365987-70366006 Msa0181990:CDS 50.0%
!! AGGAAGAGAGATTGGTGGTG+AGG + chr1_4:70366044-70366063 Msa0181990:CDS 50.0%
AGAGCCAATGTTTCTTGGCG+GGG - chr1_4:70366120-70366139 None:intergenic 50.0%
GAGAGCCAATGTTTCTTGGC+GGG - chr1_4:70366121-70366140 None:intergenic 50.0%
! TAAGGGTCCACTTTGGGAAG+AGG + chr1_4:70366188-70366207 Msa0181990:CDS 50.0%
AAGTGGAGGAGACAGAAAGG+AGG - chr1_4:70367000-70367019 None:intergenic 50.0%
AGGAAGTGGAGGAGACAGAA+AGG - chr1_4:70367003-70367022 None:intergenic 50.0%
TAGAGGGATCAAGGAAGTGG+AGG - chr1_4:70367014-70367033 None:intergenic 50.0%
AGGGTTTGTGGATGGAACAG+TGG - chr1_4:70367318-70367337 None:intergenic 50.0%
GTGCTTCTCCTTCTCCATCA+AGG + chr1_4:70367882-70367901 Msa0181990:CDS 50.0%
CTTCTCCTTCTCCATCAAGG+TGG + chr1_4:70367885-70367904 Msa0181990:CDS 50.0%
TTTGGCCACCTTGATGGAGA+AGG - chr1_4:70367893-70367912 None:intergenic 50.0%
! TCTTCCCACAATGGCGCTTT+TGG - chr1_4:70367980-70367999 None:intergenic 50.0%
TGAGACGATGGAGCCATTGA+TGG + chr1_4:70368228-70368247 Msa0181990:CDS 50.0%
! TGTTCTGGCTGCACCATCAA+TGG - chr1_4:70368244-70368263 None:intergenic 50.0%
TGGTGCAGCCAGAACAACAA+TGG + chr1_4:70368248-70368267 Msa0181990:CDS 50.0%
! GGAGGTCTCCATTGTTGTTC+TGG - chr1_4:70368259-70368278 None:intergenic 50.0%
!! ACGGTGGTGGAGGAAATAGG+TGG + chr1_4:70366094-70366113 Msa0181990:CDS 55.0%
CAAGTCTTCGTCCGAAGCTG+TGG - chr1_4:70367447-70367466 None:intergenic 55.0%
CACAGCTTCGGACGAAGACT+TGG + chr1_4:70367445-70367464 Msa0181990:CDS 55.0%
GATGCCAGAGCTGTCTGACA+CGG - chr1_4:70367773-70367792 None:intergenic 55.0%
!! ATGGGCCAAAAGCGCCATTG+TGG + chr1_4:70367972-70367991 Msa0181990:CDS 55.0%
!! TGGGCCAAAAGCGCCATTGT+GGG + chr1_4:70367973-70367992 Msa0181990:CDS 55.0%
!! GTGCCGGTTACGGCGCAAAA+CGG + chr1_4:70366003-70366022 Msa0181990:CDS 60.0%
! CCTCCGTTTTGCGCCGTAAC+CGG - chr1_4:70366009-70366028 None:intergenic 60.0%
GTTACGGCGCAAAACGGAGG+CGG + chr1_4:70366009-70366028 Msa0181990:CDS 60.0%
GTGGCCCCGCCAAGAAACAT+TGG + chr1_4:70366113-70366132 Msa0181990:CDS 60.0%
GTCTGACACGGAGACAGCTC+TGG - chr1_4:70367761-70367780 None:intergenic 60.0%
GTCTCCGTGTCAGACAGCTC+TGG + chr1_4:70367766-70367785 Msa0181990:CDS 60.0%
CCGGTTACGGCGCAAAACGG+AGG + chr1_4:70366006-70366025 Msa0181990:CDS 65.0%
GGAGGCGGCGGTGAAGAGAA+AGG + chr1_4:70366024-70366043 Msa0181990:CDS 65.0%
!! TCTGGTGCTGGCGGTGGTTG+TGG - chr1_4:70367743-70367762 None:intergenic 65.0%
! GGAGACAGCTCTGGTGCTGG+CGG - chr1_4:70367752-70367771 None:intergenic 65.0%
! CACGGAGACAGCTCTGGTGC+TGG - chr1_4:70367755-70367774 None:intergenic 65.0%
ACGGCGCAAAACGGAGGCGG+CGG + chr1_4:70366012-70366031 Msa0181990:CDS 70.0%
GCTGGCGGTGGTTGTGGTGG+TGG - chr1_4:70367737-70367756 None:intergenic 70.0%
!! GGTGCTGGCGGTGGTTGTGG+TGG - chr1_4:70367740-70367759 None:intergenic 70.0%
!! GACAGCTCTGGTGCTGGCGG+TGG - chr1_4:70367749-70367768 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 70365774 70369302 70365774 ID=Msa0181990;Name=Msa0181990
chr1_4 mRNA 70365774 70369302 70365774 ID=Msa0181990-mRNA-1;Parent=Msa0181990;Name=Msa0181990-mRNA-1;_AED=0.02;_eAED=0.02;_QI=175|1|1|1|1|1|2|816|568
chr1_4 exon 70365774 70366217 70365774 ID=Msa0181990-mRNA-1:exon:23472;Parent=Msa0181990-mRNA-1
chr1_4 exon 70367049 70369302 70367049 ID=Msa0181990-mRNA-1:exon:23473;Parent=Msa0181990-mRNA-1
chr1_4 five_prime_UTR 70365774 70365948 70365774 ID=Msa0181990-mRNA-1:five_prime_utr;Parent=Msa0181990-mRNA-1
chr1_4 CDS 70365949 70366217 70365949 ID=Msa0181990-mRNA-1:cds;Parent=Msa0181990-mRNA-1
chr1_4 CDS 70367049 70368486 70367049 ID=Msa0181990-mRNA-1:cds;Parent=Msa0181990-mRNA-1
chr1_4 three_prime_UTR 70368487 70369302 70368487 ID=Msa0181990-mRNA-1:three_prime_utr;Parent=Msa0181990-mRNA-1
Gene Sequence

>Msa0181990

ATGCAGCTTGGTGATGCAACAGTAATGATGGAGACTTGCTCCGGTGAGAATATTGTGCCGGTTACGGCGCAAAACGGAGGCGGCGGTGAAGAGAAAGGAAGAGAGATTGGTGGTGAGGAAGATGATAAGATGAATATCAATATTAACGGTGGTGGAGGAAATAGGTGGCCCCGCCAAGAAACATTGGCTCTCTTGAAGATAAGATCAGATATGGATGGTGTTTTTCGTGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAGGTTTCAAGGAAACTAGCTGAACTTGGCTATCATAGAAGCTCAAAGAAGTGCAAGGAGAAATTTGAAAATGTATACAAGTATCACAAAAGAACCAAAGAAGGTAGGAGTGGAAAATCAGAAGGAAAAACCTATAGATTTTTTGATCAATTACAAGCACTTGAAAAACAACTCACATTCTCCTCTTACCATCCAAAACCACAACCAAATAATAACACACTCTCATCACCAACAACAAATCCCAATGAAACCACACAAACAATATCATATGTCACAACCACTGTTCCATCCACAAACCCTACCACATTCGTTTCTCCTTCACCACAACCTAACAACAACAATGTTCCAAATTCTATGCCAAACATGAACAACCTATTCTCAACCACAACAACTTCAACTTCTTCTTCCACAGCTTCGGACGAAGACTTGGAAGAGAAGTATAGAAAGAAGAGAAAATGGAAGGACTATTTCAGGAGACTCACAAGACAAGTGCTTGCAAAACAAGAGGAAATGCAAAAGAAGTTTCTTGAAGCCATAGACAAACGTGAAAAAGAACACATTGCTCAACAAGATGCTTTGAGAATTCAAGAAATGGATAGAATCAATAAAGAACACGAACTTCTTATCCAAGAAAGATCATCAGCAGCTCAAAAAAATGCAGCTGTTATTGCATTTCTCCAAAAATTGTCTGGACAGCCACCACCACAACCACCGCCAGCACCAGAGCTGTCTCCGTGTCAGACAGCTCTGGCATCACAAGTTCAAACACAGCAACTAGTGATACCAAACAACAACATTGTTGAATTTCAAAATTTGAATAATGGTTACAAAAGTGGTAATGGTGGTGCTTCTCCTTCTCCATCAAGGTGGCCAAAAAGTGAAGTTCATGCTCTAATAAGGATAAGAACAAGTCTTGAACCAAAGTATCAAGAAAATGGGCCAAAAGCGCCATTGTGGGAAGATATTTCAGCTGCAATGAAGAGACAAGGATACAATAGGAATGCGAAAAGGTGCAAAGAAAAATGGGAGAATATCAACAAATACTACAAGAAAATGAAGGAAAGTAACAAGCAAAGGCGTGATGATAGTAAGACATGTCCTTATTTTAATGAACTTGAAGCTATTTACAAAGAAAAGAACAAAACACAGAACCTTTTTGGTTCTAATTCGTTTCATAGCATGAAGTCAAATGAGACGATGGAGCCATTGATGGTGCAGCCAGAACAACAATGGAGACCTCCAACTACATTTGAAGAGGGTGCTGTGGTGAAGAAGAATGTTGATGAAGCAAAAGAAGAAGATGACAATGGTGATGTTGATGATGAAGAAGATGAAAACATGGATGAATATGAAGATGGAGATAGCATGGAAGAAGATGAAGGAGGTGTTAGTAGCCGTTATGAAGTTGTGACAACAAATAAACTTTCATCAATGGACACAGTTGTATGA
Protein sequence

>Msa0181990

MQLGDATVMMETCSGENIVPVTAQNGGGGEEKGREIGGEEDDKMNININGGGGNRWPRQETLALLKIRSDMDGVFRDSSLKGPLWEEVSRKLAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLQALEKQLTFSSYHPKPQPNNNTLSSPTTNPNETTQTISYVTTTVPSTNPTTFVSPSPQPNNNNVPNSMPNMNNLFSTTTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKKFLEAIDKREKEHIAQQDALRIQEMDRINKEHELLIQERSSAAQKNAAVIAFLQKLSGQPPPQPPPAPELSPCQTALASQVQTQQLVIPNNNIVEFQNLNNGYKSGNGGASPSPSRWPKSEVHALIRIRTSLEPKYQENGPKAPLWEDISAAMKRQGYNRNAKRCKEKWENINKYYKKMKESNKQRRDDSKTCPYFNELEAIYKEKNKTQNLFGSNSFHSMKSNETMEPLMVQPEQQWRPPTTFEEGAVVKKNVDEAKEEDDNGDVDDEEDENMDEYEDGDSMEEDEGGVSSRYEVVTTNKLSSMDTVV*