Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134770 | sp|P53078|SDT1_YEAST | 31.176 | 170 | 98 | 6 | 15 | 177 | 60 | 217 | 2.05e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134770 | B7FKK9 | 89.015 | 264 | 7 | 1 | 1 | 242 | 1 | 264 | 4.05e-167 | 471 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0088470 | Msa0134770 | 0.854932 | 8.853178e-62 | -8.615850e-47 |
| Msa0134770 | Msa0418600 | 0.912441 | 1.940348e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134770 | MtrunA17_Chr1g0205581 | 89.015 | 264 | 7 | 1 | 1 | 242 | 1 | 264 | 7.79e-171 | 471 |
| Msa0134770 | MtrunA17_Chr7g0238911 | 39.068 | 279 | 103 | 4 | 3 | 216 | 7 | 283 | 2.21e-62 | 197 |
| Msa0134770 | MtrunA17_Chr4g0009921 | 39.552 | 268 | 99 | 3 | 6 | 212 | 12 | 277 | 7.16e-62 | 196 |
| Msa0134770 | MtrunA17_Chr1g0193721 | 42.489 | 233 | 106 | 6 | 10 | 222 | 11 | 235 | 1.45e-61 | 193 |
| Msa0134770 | MtrunA17_Chr4g0031841 | 39.113 | 248 | 104 | 5 | 10 | 212 | 15 | 260 | 7.73e-57 | 182 |
| Msa0134770 | MtrunA17_Chr2g0328451 | 36.429 | 280 | 118 | 6 | 3 | 224 | 7 | 284 | 6.41e-55 | 177 |
| Msa0134770 | MtrunA17_Chr4g0009961 | 36.071 | 280 | 109 | 5 | 1 | 212 | 1 | 278 | 4.51e-54 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134770 | AT2G32150.1 | 55.894 | 263 | 85 | 5 | 8 | 242 | 4 | 263 | 1.33e-94 | 278 |
| Msa0134770 | AT2G32150.3 | 70.621 | 177 | 51 | 1 | 8 | 183 | 4 | 180 | 8.65e-88 | 258 |
| Msa0134770 | AT2G32150.2 | 70.621 | 177 | 51 | 1 | 8 | 183 | 4 | 180 | 4.22e-87 | 258 |
| Msa0134770 | AT5G02230.2 | 40.996 | 261 | 105 | 4 | 1 | 214 | 1 | 259 | 1.13e-56 | 182 |
| Msa0134770 | AT5G02230.1 | 40.996 | 261 | 105 | 4 | 1 | 214 | 1 | 259 | 1.13e-56 | 182 |
| Msa0134770 | AT5G02230.3 | 40.996 | 261 | 105 | 4 | 1 | 214 | 38 | 296 | 5.65e-56 | 181 |
| Msa0134770 | AT5G59480.4 | 37.984 | 258 | 116 | 9 | 4 | 218 | 9 | 265 | 6.48e-53 | 172 |
| Msa0134770 | AT5G59480.5 | 37.984 | 258 | 116 | 9 | 4 | 218 | 9 | 265 | 6.48e-53 | 172 |
| Msa0134770 | AT5G59480.3 | 37.984 | 258 | 116 | 9 | 4 | 218 | 9 | 265 | 6.48e-53 | 172 |
| Msa0134770 | AT5G59480.1 | 37.984 | 258 | 116 | 9 | 4 | 218 | 9 | 265 | 6.48e-53 | 172 |
| Msa0134770 | AT3G62040.1 | 42.512 | 207 | 86 | 5 | 40 | 223 | 1 | 197 | 2.71e-51 | 166 |
| Msa0134770 | AT5G59480.2 | 37.984 | 258 | 115 | 10 | 4 | 218 | 9 | 264 | 9.69e-51 | 167 |
| Msa0134770 | AT5G59490.1 | 38.367 | 245 | 120 | 4 | 1 | 216 | 1 | 243 | 2.12e-50 | 166 |
| Msa0134770 | AT5G59490.2 | 44.211 | 190 | 99 | 2 | 1 | 183 | 1 | 190 | 9.10e-48 | 157 |
Find 81 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTGTCTTTGTGCTTATT+TGG | 0.191514 | 1_3:+66349283 | None:intergenic |
| TCGTCGGGGCGGGTTGAATT+AGG | 0.220477 | 1_3:+66350322 | None:intergenic |
| CAGAAGTGATTCCTGAAATA+TGG | 0.228599 | 1_3:-66349451 | Msa0134770:CDS |
| AACTCTGAGGGTGGAAGCTT+TGG | 0.284733 | 1_3:+66350925 | None:intergenic |
| ACTCTACTTCCCCATATTTC+AGG | 0.304394 | 1_3:+66349440 | None:intergenic |
| TACAATCTTCCTTTGGTTGA+TGG | 0.306805 | 1_3:+66350545 | None:intergenic |
| CTTAACGGCAGCTCCGATTC+CGG | 0.322496 | 1_3:+66350994 | None:intergenic |
| TTGTTAGATATTTACGAATT+CGG | 0.336620 | 1_3:-66350437 | Msa0134770:intron |
| CGGGTTGAATTAGGTAGATT+CGG | 0.340373 | 1_3:+66350331 | None:intergenic |
| TCCCATGGTAGCACCCTTGC+CGG | 0.343271 | 1_3:-66350890 | Msa0134770:CDS |
| GTTGAGTGTGATTAGGTAGT+TGG | 0.348044 | 1_3:+66349305 | None:intergenic |
| AGGTTCCTTAACTGAATGTC+TGG | 0.381562 | 1_3:+66350576 | None:intergenic |
| ATCGCGCACAAACAGCGAAT+TGG | 0.385299 | 1_3:-66349396 | Msa0134770:CDS |
| TTGAGTGTGATTAGGTAGTT+GGG | 0.398870 | 1_3:+66349306 | None:intergenic |
| CCCTTCGACTGCATTATCTT+CGG | 0.406216 | 1_3:-66351135 | Msa0134770:intron |
| TTAGAGCGTTGGACAGGCTT+GGG | 0.407036 | 1_3:-66350399 | Msa0134770:CDS |
| AAGAGGACAGGGAATTCGTC+GGG | 0.430210 | 1_3:+66350307 | None:intergenic |
| ATGGACATACAATCTTCCTT+TGG | 0.430892 | 1_3:+66350538 | None:intergenic |
| CTTAGAGCGTTGGACAGGCT+TGG | 0.434451 | 1_3:-66350400 | Msa0134770:CDS |
| TACCCATCCAACACCGGAAT+CGG | 0.434558 | 1_3:-66351007 | Msa0134770:CDS |
| AGAAGTGATTCCTGAAATAT+GGG | 0.441987 | 1_3:-66349450 | Msa0134770:CDS |
| TTATTTGGTTGAGTGTGATT+AGG | 0.444385 | 1_3:+66349298 | None:intergenic |
| TTTGGTTGATGGAACGTAAG+AGG | 0.450307 | 1_3:+66350556 | None:intergenic |
| GCTCCGATTCCGGTGTTGGA+TGG | 0.451001 | 1_3:+66351004 | None:intergenic |
| GACAGGGAATTCGTCGGGGC+GGG | 0.456541 | 1_3:+66350312 | None:intergenic |
| TAGTGCGCGCAAACCGGCAA+GGG | 0.457452 | 1_3:+66350877 | None:intergenic |
| AACGAAGGTTTCAAGAGGAC+AGG | 0.466936 | 1_3:+66350295 | None:intergenic |
| AAATGAATAAATAAATTGTA+TGG | 0.470617 | 1_3:-66349182 | Msa0134770:three_prime_UTR |
| GGCAGCTCCGATTCCGGTGT+TGG | 0.474489 | 1_3:+66351000 | None:intergenic |
| CTCCGATTCCGGTGTTGGAT+GGG | 0.477392 | 1_3:+66351005 | None:intergenic |
| GGGTTGAATTAGGTAGATTC+GGG | 0.478752 | 1_3:+66350332 | None:intergenic |
| TCAAACCAGACATTCAGTTA+AGG | 0.484093 | 1_3:-66350581 | Msa0134770:CDS |
| CTAAGCGCATATACTGCTGT+TGG | 0.493343 | 1_3:-66349365 | Msa0134770:CDS |
| CTTGCCGGTTTGCGCGCACT+AGG | 0.496427 | 1_3:-66350875 | Msa0134770:CDS |
| TTCTTAGTTTCGTGCACGGA+AGG | 0.502187 | 1_3:-66350620 | Msa0134770:intron |
| AAATATTGATCTCTTCCTCA+TGG | 0.505869 | 1_3:-66350969 | Msa0134770:CDS |
| TGTCCTCTTGAAACCTTCGT+TGG | 0.512254 | 1_3:-66350293 | Msa0134770:CDS |
| TCCGGTGTTGGATGGGTACA+AGG | 0.513354 | 1_3:+66351012 | None:intergenic |
| GAGGATCCACGTTGGCAGCT+TGG | 0.514928 | 1_3:+66350251 | None:intergenic |
| ATGCACTTAGAGCGTTGGAC+AGG | 0.519534 | 1_3:-66350405 | Msa0134770:CDS |
| GTTGAACTCTTTAAATCCCA+TGG | 0.530521 | 1_3:-66350905 | Msa0134770:CDS |
| GTTTATTTAGGTTGGGGAGA+CGG | 0.533207 | 1_3:-66349528 | Msa0134770:intron |
| AGCTTGAAAACTGACCTTGT+TGG | 0.533404 | 1_3:-66349342 | Msa0134770:exon |
| ATAGCCTAGTGCGCGCAAAC+CGG | 0.536055 | 1_3:+66350871 | None:intergenic |
| AACCGGCAAGGGTGCTACCA+TGG | 0.536368 | 1_3:+66350888 | None:intergenic |
| GATTCATGCACTTAGAGCGT+TGG | 0.537491 | 1_3:-66350410 | Msa0134770:CDS |
| AGCTTGGATCGCAATCTTGA+AGG | 0.539852 | 1_3:+66350267 | None:intergenic |
| AGATATTTACGAATTCGGAC+AGG | 0.548364 | 1_3:-66350432 | Msa0134770:CDS |
| AGACAATGAGCAAATAATGT+GGG | 0.551978 | 1_3:-66349269 | Msa0134770:three_prime_UTR |
| ATTTAACAAAACAACAACAA+TGG | 0.555151 | 1_3:-66351178 | Msa0134770:exon |
| ACCGGCAAGGGTGCTACCAT+GGG | 0.557550 | 1_3:+66350889 | None:intergenic |
| CAACGTGGATCCTCGTCGTA+CGG | 0.560427 | 1_3:-66350242 | Msa0134770:intron |
| TGAAATATGGGGAAGTAGAG+TGG | 0.562799 | 1_3:-66349438 | Msa0134770:CDS |
| GGAAGTCAATTCGAATACAT+AGG | 0.562867 | 1_3:+66349127 | None:intergenic |
| TCTGGTTTGATTAATTCGTA+AGG | 0.564418 | 1_3:+66350594 | None:intergenic |
| ACCGAAGATAATGCAGTCGA+AGG | 0.565357 | 1_3:+66351134 | None:intergenic |
| CTAGTGCGCGCAAACCGGCA+AGG | 0.567139 | 1_3:+66350876 | None:intergenic |
| CAAGAGGACAGGGAATTCGT+CGG | 0.575073 | 1_3:+66350306 | None:intergenic |
| TTTAAAGAGTTCAACTCTGA+GGG | 0.583777 | 1_3:+66350913 | None:intergenic |
| TTACCTGTGGTATTCTTCTG+CGG | 0.592315 | 1_3:+66350841 | None:intergenic |
| CAACGTTGGGGACTATGTAG+TGG | 0.595607 | 1_3:-66349498 | Msa0134770:CDS |
| GTTCTTCTTAGTTTCGTGCA+CGG | 0.597143 | 1_3:-66350624 | Msa0134770:intron |
| ACCTTGTACCCATCCAACAC+CGG | 0.610346 | 1_3:-66351013 | Msa0134770:CDS |
| AAAGAGTTCAACTCTGAGGG+TGG | 0.612715 | 1_3:+66350916 | None:intergenic |
| AAGACAATGAGCAAATAATG+TGG | 0.617132 | 1_3:-66349270 | Msa0134770:three_prime_UTR |
| GGACAGGGAATTCGTCGGGG+CGG | 0.619508 | 1_3:+66350311 | None:intergenic |
| CCGAAGATAATGCAGTCGAA+GGG | 0.620542 | 1_3:+66351135 | None:intergenic |
| ATCTTGAAGGCATCCAACGA+AGG | 0.622873 | 1_3:+66350280 | None:intergenic |
| ATTTAAAGAGTTCAACTCTG+AGG | 0.633078 | 1_3:+66350912 | None:intergenic |
| GACAATGAGCAAATAATGTG+GGG | 0.639085 | 1_3:-66349268 | Msa0134770:three_prime_UTR |
| ACGAAGGTTTCAAGAGGACA+GGG | 0.645747 | 1_3:+66350296 | None:intergenic |
| TCACCGCAGAAGAATACCAC+AGG | 0.655318 | 1_3:-66350844 | Msa0134770:intron |
| AGTCAATTCGAATACATAGG+AGG | 0.658307 | 1_3:+66349130 | None:intergenic |
| TGCGATCCAAGCTGCCAACG+TGG | 0.658698 | 1_3:-66350257 | Msa0134770:CDS |
| CATCCAACGAAGGTTTCAAG+AGG | 0.662600 | 1_3:+66350290 | None:intergenic |
| AGTTGACTCACCGTACGACG+AGG | 0.671211 | 1_3:+66350232 | None:intergenic |
| TCTTACGTTCCATCAACCAA+AGG | 0.686021 | 1_3:-66350554 | Msa0134770:CDS |
| AGAGGACAGGGAATTCGTCG+GGG | 0.686285 | 1_3:+66350308 | None:intergenic |
| GTATGTACAAACATCCAACA+AGG | 0.720184 | 1_3:+66349328 | None:intergenic |
| GAAGTGATTCCTGAAATATG+GGG | 0.730085 | 1_3:-66349449 | Msa0134770:CDS |
| CGTACGACGAGGATCCACGT+TGG | 0.778989 | 1_3:+66350243 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATTAAGATTAGAAAA+TGG | + | chr1_3:66349768-66349787 | None:intergenic | 10.0% |
| !!! | CTTGAAATTATTATTATTTT+TGG | - | chr1_3:66349791-66349810 | Msa0134770:intron | 10.0% |
| !! | AAATGAATAAATAAATTGTA+TGG | - | chr1_3:66351102-66351121 | Msa0134770:intron | 10.0% |
| !! | AATAAATTAAGATTAGAAAA+TGG | + | chr1_3:66349768-66349787 | None:intergenic | 10.0% |
| !!! | CTTGAAATTATTATTATTTT+TGG | - | chr1_3:66349791-66349810 | Msa0134770:intron | 10.0% |
| !! | AAATGAATAAATAAATTGTA+TGG | - | chr1_3:66351102-66351121 | Msa0134770:intron | 10.0% |
| !! | AGAAAAATGATATTAATTGA+AGG | + | chr1_3:66349216-66349235 | None:intergenic | 15.0% |
| !! | ATACATACTACTAATTAATT+TGG | + | chr1_3:66349622-66349641 | None:intergenic | 15.0% |
| !!! | TTGGTATATATTTCTAATTT+TGG | - | chr1_3:66349810-66349829 | Msa0134770:intron | 15.0% |
| !! | TGTCAAATTGTTTATAATTA+TGG | - | chr1_3:66350224-66350243 | Msa0134770:intron | 15.0% |
| !! | AGAAAAATGATATTAATTGA+AGG | + | chr1_3:66349216-66349235 | None:intergenic | 15.0% |
| !! | ATACATACTACTAATTAATT+TGG | + | chr1_3:66349622-66349641 | None:intergenic | 15.0% |
| !!! | TTGGTATATATTTCTAATTT+TGG | - | chr1_3:66349810-66349829 | Msa0134770:intron | 15.0% |
| !! | TGTCAAATTGTTTATAATTA+TGG | - | chr1_3:66350224-66350243 | Msa0134770:intron | 15.0% |
| !! | ATTTAACAAAACAACAACAA+TGG | - | chr1_3:66349106-66349125 | Msa0134770:three_prime_UTR | 20.0% |
| !! | ATTTATTGATCAAACAGATT+TGG | - | chr1_3:66349243-66349262 | Msa0134770:three_prime_UTR | 20.0% |
| !!! | GAGATCAATATTTTTCTTAA+CGG | + | chr1_3:66349308-66349327 | None:intergenic | 20.0% |
| !! | TTGTTAGATATTTACGAATT+CGG | - | chr1_3:66349847-66349866 | Msa0134770:intron | 20.0% |
| !!! | TTATAATTATGGTGTTGATT+TGG | - | chr1_3:66350235-66350254 | Msa0134770:intron | 20.0% |
| !!! | TTTGGAATTGCATTAAATAA+TGG | - | chr1_3:66350330-66350349 | Msa0134770:CDS | 20.0% |
| !!! | GAGATTTAATTTGTCATATA+TGG | + | chr1_3:66350438-66350457 | None:intergenic | 20.0% |
| !! | TTGCAAGTAAATATTAACTT+TGG | + | chr1_3:66350570-66350589 | None:intergenic | 20.0% |
| !! | GTATGTATATGTGTTTATTT+AGG | - | chr1_3:66350744-66350763 | Msa0134770:intron | 20.0% |
| !!! | TATATGTGTTTATTTAGGTT+GGG | - | chr1_3:66350749-66350768 | Msa0134770:intron | 20.0% |
| !!! | ATTTAGAAGTTTTACAAGTT+TGG | + | chr1_3:66351181-66351200 | None:intergenic | 20.0% |
| !! | ATTTAACAAAACAACAACAA+TGG | - | chr1_3:66349106-66349125 | Msa0134770:three_prime_UTR | 20.0% |
| !! | ATTTATTGATCAAACAGATT+TGG | - | chr1_3:66349243-66349262 | Msa0134770:three_prime_UTR | 20.0% |
| !!! | GAGATCAATATTTTTCTTAA+CGG | + | chr1_3:66349308-66349327 | None:intergenic | 20.0% |
| !! | TTGTTAGATATTTACGAATT+CGG | - | chr1_3:66349847-66349866 | Msa0134770:intron | 20.0% |
| !!! | TTATAATTATGGTGTTGATT+TGG | - | chr1_3:66350235-66350254 | Msa0134770:intron | 20.0% |
| !!! | TTTGGAATTGCATTAAATAA+TGG | - | chr1_3:66350330-66350349 | Msa0134770:CDS | 20.0% |
| !!! | GAGATTTAATTTGTCATATA+TGG | + | chr1_3:66350438-66350457 | None:intergenic | 20.0% |
| !! | TTGCAAGTAAATATTAACTT+TGG | + | chr1_3:66350570-66350589 | None:intergenic | 20.0% |
| !! | GTATGTATATGTGTTTATTT+AGG | - | chr1_3:66350744-66350763 | Msa0134770:intron | 20.0% |
| !!! | TATATGTGTTTATTTAGGTT+GGG | - | chr1_3:66350749-66350768 | Msa0134770:intron | 20.0% |
| !!! | ATTTAGAAGTTTTACAAGTT+TGG | + | chr1_3:66351181-66351200 | None:intergenic | 20.0% |
| ! | AATTGAAGGAGTTTGTAAAT+TGG | + | chr1_3:66349202-66349221 | None:intergenic | 25.0% |
| ! | TTAAGTTTATGCCAAAATCT+CGG | + | chr1_3:66349547-66349566 | None:intergenic | 25.0% |
| !! | GAAAAAGAATTGAGTTGTTA+AGG | - | chr1_3:66350268-66350287 | Msa0134770:CDS | 25.0% |
| !! | TCAATTAAATTAGTGCTGTT+TGG | + | chr1_3:66350680-66350699 | None:intergenic | 25.0% |
| ! | GTATATGTGTTTATTTAGGT+TGG | - | chr1_3:66350748-66350767 | Msa0134770:intron | 25.0% |
| !!! | ATATGTGTTTATTTAGGTTG+GGG | - | chr1_3:66350750-66350769 | Msa0134770:intron | 25.0% |
| ! | AATTGAAGGAGTTTGTAAAT+TGG | + | chr1_3:66349202-66349221 | None:intergenic | 25.0% |
| ! | TTAAGTTTATGCCAAAATCT+CGG | + | chr1_3:66349547-66349566 | None:intergenic | 25.0% |
| !! | GAAAAAGAATTGAGTTGTTA+AGG | - | chr1_3:66350268-66350287 | Msa0134770:CDS | 25.0% |
| !! | TCAATTAAATTAGTGCTGTT+TGG | + | chr1_3:66350680-66350699 | None:intergenic | 25.0% |
| ! | GTATATGTGTTTATTTAGGT+TGG | - | chr1_3:66350748-66350767 | Msa0134770:intron | 25.0% |
| !!! | ATATGTGTTTATTTAGGTTG+GGG | - | chr1_3:66350750-66350769 | Msa0134770:intron | 25.0% |
| AAATATTGATCTCTTCCTCA+TGG | - | chr1_3:66349315-66349334 | Msa0134770:three_prime_UTR | 30.0% | |
| TTTAAAGAGTTCAACTCTGA+GGG | + | chr1_3:66349374-66349393 | None:intergenic | 30.0% | |
| ATTTAAAGAGTTCAACTCTG+AGG | + | chr1_3:66349375-66349394 | None:intergenic | 30.0% | |
| AGCAAACAAACGAACAAATT+AGG | + | chr1_3:66349474-66349493 | None:intergenic | 30.0% | |
| ! | TCTGGTTTGATTAATTCGTA+AGG | + | chr1_3:66349693-66349712 | None:intergenic | 30.0% |
| AGTTAACAGTTAGCTAACTT+TGG | - | chr1_3:66350312-66350331 | Msa0134770:CDS | 30.0% | |
| TGCGACTATAACTTCATAAA+GGG | + | chr1_3:66350391-66350410 | None:intergenic | 30.0% | |
| TTGCGACTATAACTTCATAA+AGG | + | chr1_3:66350392-66350411 | None:intergenic | 30.0% | |
| GTAAAATTACCAAAACAGTG+TGG | + | chr1_3:66350544-66350563 | None:intergenic | 30.0% | |
| AGAAGTGATTCCTGAAATAT+GGG | - | chr1_3:66350834-66350853 | Msa0134770:intron | 30.0% | |
| TTATTTGGTTGAGTGTGATT+AGG | + | chr1_3:66350989-66351008 | None:intergenic | 30.0% | |
| TCATTGTCTTTGTGCTTATT+TGG | + | chr1_3:66351004-66351023 | None:intergenic | 30.0% | |
| AAGACAATGAGCAAATAATG+TGG | - | chr1_3:66351014-66351033 | Msa0134770:CDS | 30.0% | |
| AGACAATGAGCAAATAATGT+GGG | - | chr1_3:66351015-66351034 | Msa0134770:CDS | 30.0% | |
| AAATATTGATCTCTTCCTCA+TGG | - | chr1_3:66349315-66349334 | Msa0134770:three_prime_UTR | 30.0% | |
| TTTAAAGAGTTCAACTCTGA+GGG | + | chr1_3:66349374-66349393 | None:intergenic | 30.0% | |
| ATTTAAAGAGTTCAACTCTG+AGG | + | chr1_3:66349375-66349394 | None:intergenic | 30.0% | |
| AGCAAACAAACGAACAAATT+AGG | + | chr1_3:66349474-66349493 | None:intergenic | 30.0% | |
| ! | TCTGGTTTGATTAATTCGTA+AGG | + | chr1_3:66349693-66349712 | None:intergenic | 30.0% |
| AGTTAACAGTTAGCTAACTT+TGG | - | chr1_3:66350312-66350331 | Msa0134770:CDS | 30.0% | |
| TGCGACTATAACTTCATAAA+GGG | + | chr1_3:66350391-66350410 | None:intergenic | 30.0% | |
| TTGCGACTATAACTTCATAA+AGG | + | chr1_3:66350392-66350411 | None:intergenic | 30.0% | |
| GTAAAATTACCAAAACAGTG+TGG | + | chr1_3:66350544-66350563 | None:intergenic | 30.0% | |
| AGAAGTGATTCCTGAAATAT+GGG | - | chr1_3:66350834-66350853 | Msa0134770:intron | 30.0% | |
| TTATTTGGTTGAGTGTGATT+AGG | + | chr1_3:66350989-66351008 | None:intergenic | 30.0% | |
| TCATTGTCTTTGTGCTTATT+TGG | + | chr1_3:66351004-66351023 | None:intergenic | 30.0% | |
| AAGACAATGAGCAAATAATG+TGG | - | chr1_3:66351014-66351033 | Msa0134770:CDS | 30.0% | |
| AGACAATGAGCAAATAATGT+GGG | - | chr1_3:66351015-66351034 | Msa0134770:CDS | 30.0% | |
| ! | AGAAACCACATTTTTCCATG+AGG | + | chr1_3:66349333-66349352 | None:intergenic | 35.0% |
| GTTGAACTCTTTAAATCCCA+TGG | - | chr1_3:66349379-66349398 | Msa0134770:CDS | 35.0% | |
| !!! | GCACGATTTTGAAATATCCA+CGG | + | chr1_3:66349501-66349520 | None:intergenic | 35.0% |
| GTGCTACACTCTATATCTTA+TGG | - | chr1_3:66349517-66349536 | Msa0134770:CDS | 35.0% | |
| TCAAACCAGACATTCAGTTA+AGG | - | chr1_3:66349703-66349722 | Msa0134770:intron | 35.0% | |
| TACAATCTTCCTTTGGTTGA+TGG | + | chr1_3:66349742-66349761 | None:intergenic | 35.0% | |
| ATGGACATACAATCTTCCTT+TGG | + | chr1_3:66349749-66349768 | None:intergenic | 35.0% | |
| AGATATTTACGAATTCGGAC+AGG | - | chr1_3:66349852-66349871 | Msa0134770:intron | 35.0% | |
| !! | TCTTCTTTTGCAGTTGTTTC+TGG | - | chr1_3:66350475-66350494 | Msa0134770:intron | 35.0% |
| ATCATTGCGGGTAAAGAAAT+GGG | - | chr1_3:66350515-66350534 | Msa0134770:intron | 35.0% | |
| TACAAAATCACAGTGACTCA+AGG | + | chr1_3:66350624-66350643 | None:intergenic | 35.0% | |
| ! | CAATTTGTTTGTCAGAATCG+TGG | + | chr1_3:66350649-66350668 | None:intergenic | 35.0% |
| CAGAAGTGATTCCTGAAATA+TGG | - | chr1_3:66350833-66350852 | Msa0134770:intron | 35.0% | |
| GAAGTGATTCCTGAAATATG+GGG | - | chr1_3:66350835-66350854 | Msa0134770:intron | 35.0% | |
| GTATGTACAAACATCCAACA+AGG | + | chr1_3:66350959-66350978 | None:intergenic | 35.0% | |
| TTGAGTGTGATTAGGTAGTT+GGG | + | chr1_3:66350981-66351000 | None:intergenic | 35.0% | |
| GACAATGAGCAAATAATGTG+GGG | - | chr1_3:66351016-66351035 | Msa0134770:CDS | 35.0% | |
| AGTCAATTCGAATACATAGG+AGG | + | chr1_3:66351157-66351176 | None:intergenic | 35.0% | |
| GGAAGTCAATTCGAATACAT+AGG | + | chr1_3:66351160-66351179 | None:intergenic | 35.0% | |
| ! | AGAAACCACATTTTTCCATG+AGG | + | chr1_3:66349333-66349352 | None:intergenic | 35.0% |
| GTTGAACTCTTTAAATCCCA+TGG | - | chr1_3:66349379-66349398 | Msa0134770:CDS | 35.0% | |
| !!! | GCACGATTTTGAAATATCCA+CGG | + | chr1_3:66349501-66349520 | None:intergenic | 35.0% |
| GTGCTACACTCTATATCTTA+TGG | - | chr1_3:66349517-66349536 | Msa0134770:CDS | 35.0% | |
| TCAAACCAGACATTCAGTTA+AGG | - | chr1_3:66349703-66349722 | Msa0134770:intron | 35.0% | |
| TACAATCTTCCTTTGGTTGA+TGG | + | chr1_3:66349742-66349761 | None:intergenic | 35.0% | |
| ATGGACATACAATCTTCCTT+TGG | + | chr1_3:66349749-66349768 | None:intergenic | 35.0% | |
| AGATATTTACGAATTCGGAC+AGG | - | chr1_3:66349852-66349871 | Msa0134770:intron | 35.0% | |
| !! | TCTTCTTTTGCAGTTGTTTC+TGG | - | chr1_3:66350475-66350494 | Msa0134770:intron | 35.0% |
| ATCATTGCGGGTAAAGAAAT+GGG | - | chr1_3:66350515-66350534 | Msa0134770:intron | 35.0% | |
| TACAAAATCACAGTGACTCA+AGG | + | chr1_3:66350624-66350643 | None:intergenic | 35.0% | |
| ! | CAATTTGTTTGTCAGAATCG+TGG | + | chr1_3:66350649-66350668 | None:intergenic | 35.0% |
| CAGAAGTGATTCCTGAAATA+TGG | - | chr1_3:66350833-66350852 | Msa0134770:intron | 35.0% | |
| GAAGTGATTCCTGAAATATG+GGG | - | chr1_3:66350835-66350854 | Msa0134770:intron | 35.0% | |
| GTATGTACAAACATCCAACA+AGG | + | chr1_3:66350959-66350978 | None:intergenic | 35.0% | |
| TTGAGTGTGATTAGGTAGTT+GGG | + | chr1_3:66350981-66351000 | None:intergenic | 35.0% | |
| GACAATGAGCAAATAATGTG+GGG | - | chr1_3:66351016-66351035 | Msa0134770:CDS | 35.0% | |
| AGTCAATTCGAATACATAGG+AGG | + | chr1_3:66351157-66351176 | None:intergenic | 35.0% | |
| GGAAGTCAATTCGAATACAT+AGG | + | chr1_3:66351160-66351179 | None:intergenic | 35.0% | |
| CTCTTCCTCATGGAAAAATG+TGG | - | chr1_3:66349325-66349344 | Msa0134770:three_prime_UTR | 40.0% | |
| TTACCTGTGGTATTCTTCTG+CGG | + | chr1_3:66349446-66349465 | None:intergenic | 40.0% | |
| GAAGAATACCACAGGTAACT+TGG | - | chr1_3:66349448-66349467 | Msa0134770:CDS | 40.0% | |
| AAATTAGGCCAAGTTACCTG+TGG | + | chr1_3:66349459-66349478 | None:intergenic | 40.0% | |
| ! | CTTATGGATCACCGAGATTT+TGG | - | chr1_3:66349533-66349552 | Msa0134770:intron | 40.0% |
| GTTCTTCTTAGTTTCGTGCA+CGG | - | chr1_3:66349660-66349679 | Msa0134770:intron | 40.0% | |
| AGGTTCCTTAACTGAATGTC+TGG | + | chr1_3:66349711-66349730 | None:intergenic | 40.0% | |
| !! | TTTGGTTGATGGAACGTAAG+AGG | + | chr1_3:66349731-66349750 | None:intergenic | 40.0% |
| TCTTACGTTCCATCAACCAA+AGG | - | chr1_3:66349730-66349749 | Msa0134770:intron | 40.0% | |
| GGGTTGAATTAGGTAGATTC+GGG | + | chr1_3:66349955-66349974 | None:intergenic | 40.0% | |
| ! | CGGGTTGAATTAGGTAGATT+CGG | + | chr1_3:66349956-66349975 | None:intergenic | 40.0% |
| CAGTGTTCGAAACATCATTG+CGG | - | chr1_3:66350502-66350521 | Msa0134770:intron | 40.0% | |
| AGTGTTCGAAACATCATTGC+GGG | - | chr1_3:66350503-66350522 | Msa0134770:intron | 40.0% | |
| CATCATTGCGGGTAAAGAAA+TGG | - | chr1_3:66350514-66350533 | Msa0134770:intron | 40.0% | |
| !! | GTTTATTTAGGTTGGGGAGA+CGG | - | chr1_3:66350756-66350775 | Msa0134770:intron | 40.0% |
| AGACGGTGAAAAACAACGTT+GGG | - | chr1_3:66350773-66350792 | Msa0134770:intron | 40.0% | |
| ACTCTACTTCCCCATATTTC+AGG | + | chr1_3:66350847-66350866 | None:intergenic | 40.0% | |
| TGAAATATGGGGAAGTAGAG+TGG | - | chr1_3:66350846-66350865 | Msa0134770:CDS | 40.0% | |
| AGCTTGAAAACTGACCTTGT+TGG | - | chr1_3:66350942-66350961 | Msa0134770:CDS | 40.0% | |
| GTTGAGTGTGATTAGGTAGT+TGG | + | chr1_3:66350982-66351001 | None:intergenic | 40.0% | |
| CTCTTCCTCATGGAAAAATG+TGG | - | chr1_3:66349325-66349344 | Msa0134770:three_prime_UTR | 40.0% | |
| TTACCTGTGGTATTCTTCTG+CGG | + | chr1_3:66349446-66349465 | None:intergenic | 40.0% | |
| GAAGAATACCACAGGTAACT+TGG | - | chr1_3:66349448-66349467 | Msa0134770:CDS | 40.0% | |
| AAATTAGGCCAAGTTACCTG+TGG | + | chr1_3:66349459-66349478 | None:intergenic | 40.0% | |
| ! | CTTATGGATCACCGAGATTT+TGG | - | chr1_3:66349533-66349552 | Msa0134770:intron | 40.0% |
| GTTCTTCTTAGTTTCGTGCA+CGG | - | chr1_3:66349660-66349679 | Msa0134770:intron | 40.0% | |
| AGGTTCCTTAACTGAATGTC+TGG | + | chr1_3:66349711-66349730 | None:intergenic | 40.0% | |
| !! | TTTGGTTGATGGAACGTAAG+AGG | + | chr1_3:66349731-66349750 | None:intergenic | 40.0% |
| TCTTACGTTCCATCAACCAA+AGG | - | chr1_3:66349730-66349749 | Msa0134770:intron | 40.0% | |
| GGGTTGAATTAGGTAGATTC+GGG | + | chr1_3:66349955-66349974 | None:intergenic | 40.0% | |
| ! | CGGGTTGAATTAGGTAGATT+CGG | + | chr1_3:66349956-66349975 | None:intergenic | 40.0% |
| CAGTGTTCGAAACATCATTG+CGG | - | chr1_3:66350502-66350521 | Msa0134770:intron | 40.0% | |
| AGTGTTCGAAACATCATTGC+GGG | - | chr1_3:66350503-66350522 | Msa0134770:intron | 40.0% | |
| CATCATTGCGGGTAAAGAAA+TGG | - | chr1_3:66350514-66350533 | Msa0134770:intron | 40.0% | |
| !! | GTTTATTTAGGTTGGGGAGA+CGG | - | chr1_3:66350756-66350775 | Msa0134770:intron | 40.0% |
| AGACGGTGAAAAACAACGTT+GGG | - | chr1_3:66350773-66350792 | Msa0134770:intron | 40.0% | |
| ACTCTACTTCCCCATATTTC+AGG | + | chr1_3:66350847-66350866 | None:intergenic | 40.0% | |
| TGAAATATGGGGAAGTAGAG+TGG | - | chr1_3:66350846-66350865 | Msa0134770:CDS | 40.0% | |
| AGCTTGAAAACTGACCTTGT+TGG | - | chr1_3:66350942-66350961 | Msa0134770:CDS | 40.0% | |
| GTTGAGTGTGATTAGGTAGT+TGG | + | chr1_3:66350982-66351001 | None:intergenic | 40.0% | |
| CCGAAGATAATGCAGTCGAA+GGG | + | chr1_3:66349152-66349171 | None:intergenic | 45.0% | |
| CCCTTCGACTGCATTATCTT+CGG | - | chr1_3:66349149-66349168 | Msa0134770:three_prime_UTR | 45.0% | |
| ACCGAAGATAATGCAGTCGA+AGG | + | chr1_3:66349153-66349172 | None:intergenic | 45.0% | |
| ! | AAAGAGTTCAACTCTGAGGG+TGG | + | chr1_3:66349371-66349390 | None:intergenic | 45.0% |
| TCGTTTGTTTGCTTTCACCG+TGG | - | chr1_3:66349481-66349500 | Msa0134770:CDS | 45.0% | |
| TTCTTAGTTTCGTGCACGGA+AGG | - | chr1_3:66349664-66349683 | Msa0134770:intron | 45.0% | |
| GATTCATGCACTTAGAGCGT+TGG | - | chr1_3:66349874-66349893 | Msa0134770:intron | 45.0% | |
| ACGAAGGTTTCAAGAGGACA+GGG | + | chr1_3:66349991-66350010 | None:intergenic | 45.0% | |
| AACGAAGGTTTCAAGAGGAC+AGG | + | chr1_3:66349992-66350011 | None:intergenic | 45.0% | |
| TGTCCTCTTGAAACCTTCGT+TGG | - | chr1_3:66349991-66350010 | Msa0134770:intron | 45.0% | |
| CATCCAACGAAGGTTTCAAG+AGG | + | chr1_3:66349997-66350016 | None:intergenic | 45.0% | |
| !! | ATCTTGAAGGCATCCAACGA+AGG | + | chr1_3:66350007-66350026 | None:intergenic | 45.0% |
| AGCTTGGATCGCAATCTTGA+AGG | + | chr1_3:66350020-66350039 | None:intergenic | 45.0% | |
| CCGTCATTCACAAGTCGTTA+CGG | + | chr1_3:66350089-66350108 | None:intergenic | 45.0% | |
| CCGTAACGACTTGTGAATGA+CGG | - | chr1_3:66350086-66350105 | Msa0134770:intron | 45.0% | |
| ! | AATGGGTCTCCACACTGTTT+TGG | - | chr1_3:66350532-66350551 | Msa0134770:intron | 45.0% |
| GAGACGGTGAAAAACAACGT+TGG | - | chr1_3:66350772-66350791 | Msa0134770:intron | 45.0% | |
| GACGGTGAAAAACAACGTTG+GGG | - | chr1_3:66350774-66350793 | Msa0134770:intron | 45.0% | |
| CTAAGCGCATATACTGCTGT+TGG | - | chr1_3:66350919-66350938 | Msa0134770:CDS | 45.0% | |
| CCGAAGATAATGCAGTCGAA+GGG | + | chr1_3:66349152-66349171 | None:intergenic | 45.0% | |
| CCCTTCGACTGCATTATCTT+CGG | - | chr1_3:66349149-66349168 | Msa0134770:three_prime_UTR | 45.0% | |
| ACCGAAGATAATGCAGTCGA+AGG | + | chr1_3:66349153-66349172 | None:intergenic | 45.0% | |
| ! | AAAGAGTTCAACTCTGAGGG+TGG | + | chr1_3:66349371-66349390 | None:intergenic | 45.0% |
| TCGTTTGTTTGCTTTCACCG+TGG | - | chr1_3:66349481-66349500 | Msa0134770:CDS | 45.0% | |
| TTCTTAGTTTCGTGCACGGA+AGG | - | chr1_3:66349664-66349683 | Msa0134770:intron | 45.0% | |
| GATTCATGCACTTAGAGCGT+TGG | - | chr1_3:66349874-66349893 | Msa0134770:intron | 45.0% | |
| ACGAAGGTTTCAAGAGGACA+GGG | + | chr1_3:66349991-66350010 | None:intergenic | 45.0% | |
| AACGAAGGTTTCAAGAGGAC+AGG | + | chr1_3:66349992-66350011 | None:intergenic | 45.0% | |
| TGTCCTCTTGAAACCTTCGT+TGG | - | chr1_3:66349991-66350010 | Msa0134770:intron | 45.0% | |
| CATCCAACGAAGGTTTCAAG+AGG | + | chr1_3:66349997-66350016 | None:intergenic | 45.0% | |
| !! | ATCTTGAAGGCATCCAACGA+AGG | + | chr1_3:66350007-66350026 | None:intergenic | 45.0% |
| AGCTTGGATCGCAATCTTGA+AGG | + | chr1_3:66350020-66350039 | None:intergenic | 45.0% | |
| CCGTCATTCACAAGTCGTTA+CGG | + | chr1_3:66350089-66350108 | None:intergenic | 45.0% | |
| CCGTAACGACTTGTGAATGA+CGG | - | chr1_3:66350086-66350105 | Msa0134770:intron | 45.0% | |
| ! | AATGGGTCTCCACACTGTTT+TGG | - | chr1_3:66350532-66350551 | Msa0134770:intron | 45.0% |
| GAGACGGTGAAAAACAACGT+TGG | - | chr1_3:66350772-66350791 | Msa0134770:intron | 45.0% | |
| GACGGTGAAAAACAACGTTG+GGG | - | chr1_3:66350774-66350793 | Msa0134770:intron | 45.0% | |
| CTAAGCGCATATACTGCTGT+TGG | - | chr1_3:66350919-66350938 | Msa0134770:CDS | 45.0% | |
| ACCTTGTACCCATCCAACAC+CGG | - | chr1_3:66349271-66349290 | Msa0134770:three_prime_UTR | 50.0% | |
| TACCCATCCAACACCGGAAT+CGG | - | chr1_3:66349277-66349296 | Msa0134770:three_prime_UTR | 50.0% | |
| ! | AACTCTGAGGGTGGAAGCTT+TGG | + | chr1_3:66349362-66349381 | None:intergenic | 50.0% |
| TCACCGCAGAAGAATACCAC+AGG | - | chr1_3:66349440-66349459 | Msa0134770:CDS | 50.0% | |
| !! | ATGCACTTAGAGCGTTGGAC+AGG | - | chr1_3:66349879-66349898 | Msa0134770:intron | 50.0% |
| !! | TTAGAGCGTTGGACAGGCTT+GGG | - | chr1_3:66349885-66349904 | Msa0134770:intron | 50.0% |
| AAGAGGACAGGGAATTCGTC+GGG | + | chr1_3:66349980-66349999 | None:intergenic | 50.0% | |
| CAAGAGGACAGGGAATTCGT+CGG | + | chr1_3:66349981-66350000 | None:intergenic | 50.0% | |
| CAACGTTGGGGACTATGTAG+TGG | - | chr1_3:66350786-66350805 | Msa0134770:intron | 50.0% | |
| ATCGCGCACAAACAGCGAAT+TGG | - | chr1_3:66350888-66350907 | Msa0134770:CDS | 50.0% | |
| ACCTTGTACCCATCCAACAC+CGG | - | chr1_3:66349271-66349290 | Msa0134770:three_prime_UTR | 50.0% | |
| TACCCATCCAACACCGGAAT+CGG | - | chr1_3:66349277-66349296 | Msa0134770:three_prime_UTR | 50.0% | |
| ! | AACTCTGAGGGTGGAAGCTT+TGG | + | chr1_3:66349362-66349381 | None:intergenic | 50.0% |
| TCACCGCAGAAGAATACCAC+AGG | - | chr1_3:66349440-66349459 | Msa0134770:CDS | 50.0% | |
| !! | ATGCACTTAGAGCGTTGGAC+AGG | - | chr1_3:66349879-66349898 | Msa0134770:intron | 50.0% |
| !! | TTAGAGCGTTGGACAGGCTT+GGG | - | chr1_3:66349885-66349904 | Msa0134770:intron | 50.0% |
| AAGAGGACAGGGAATTCGTC+GGG | + | chr1_3:66349980-66349999 | None:intergenic | 50.0% | |
| CAAGAGGACAGGGAATTCGT+CGG | + | chr1_3:66349981-66350000 | None:intergenic | 50.0% | |
| CAACGTTGGGGACTATGTAG+TGG | - | chr1_3:66350786-66350805 | Msa0134770:intron | 50.0% | |
| ATCGCGCACAAACAGCGAAT+TGG | - | chr1_3:66350888-66350907 | Msa0134770:CDS | 50.0% | |
| ! | TCCGGTGTTGGATGGGTACA+AGG | + | chr1_3:66349275-66349294 | None:intergenic | 55.0% |
| ! | CTCCGATTCCGGTGTTGGAT+GGG | + | chr1_3:66349282-66349301 | None:intergenic | 55.0% |
| CTTAACGGCAGCTCCGATTC+CGG | + | chr1_3:66349293-66349312 | None:intergenic | 55.0% | |
| ATAGCCTAGTGCGCGCAAAC+CGG | + | chr1_3:66349416-66349435 | None:intergenic | 55.0% | |
| !! | CTTAGAGCGTTGGACAGGCT+TGG | - | chr1_3:66349884-66349903 | Msa0134770:intron | 55.0% |
| AGAGGACAGGGAATTCGTCG+GGG | + | chr1_3:66349979-66349998 | None:intergenic | 55.0% | |
| CAACGTGGATCCTCGTCGTA+CGG | - | chr1_3:66350042-66350061 | Msa0134770:intron | 55.0% | |
| ! | AGTTGACTCACCGTACGACG+AGG | + | chr1_3:66350055-66350074 | None:intergenic | 55.0% |
| ! | TCCGGTGTTGGATGGGTACA+AGG | + | chr1_3:66349275-66349294 | None:intergenic | 55.0% |
| ! | CTCCGATTCCGGTGTTGGAT+GGG | + | chr1_3:66349282-66349301 | None:intergenic | 55.0% |
| CTTAACGGCAGCTCCGATTC+CGG | + | chr1_3:66349293-66349312 | None:intergenic | 55.0% | |
| ATAGCCTAGTGCGCGCAAAC+CGG | + | chr1_3:66349416-66349435 | None:intergenic | 55.0% | |
| !! | CTTAGAGCGTTGGACAGGCT+TGG | - | chr1_3:66349884-66349903 | Msa0134770:intron | 55.0% |
| AGAGGACAGGGAATTCGTCG+GGG | + | chr1_3:66349979-66349998 | None:intergenic | 55.0% | |
| CAACGTGGATCCTCGTCGTA+CGG | - | chr1_3:66350042-66350061 | Msa0134770:intron | 55.0% | |
| ! | AGTTGACTCACCGTACGACG+AGG | + | chr1_3:66350055-66350074 | None:intergenic | 55.0% |
| ! | GCTCCGATTCCGGTGTTGGA+TGG | + | chr1_3:66349283-66349302 | None:intergenic | 60.0% |
| TCCCATGGTAGCACCCTTGC+CGG | - | chr1_3:66349394-66349413 | Msa0134770:CDS | 60.0% | |
| !! | ACCGGCAAGGGTGCTACCAT+GGG | + | chr1_3:66349398-66349417 | None:intergenic | 60.0% |
| !! | AACCGGCAAGGGTGCTACCA+TGG | + | chr1_3:66349399-66349418 | None:intergenic | 60.0% |
| TAGTGCGCGCAAACCGGCAA+GGG | + | chr1_3:66349410-66349429 | None:intergenic | 60.0% | |
| !! | TCGTCGGGGCGGGTTGAATT+AGG | + | chr1_3:66349965-66349984 | None:intergenic | 60.0% |
| TGCGATCCAAGCTGCCAACG+TGG | - | chr1_3:66350027-66350046 | Msa0134770:intron | 60.0% | |
| GAGGATCCACGTTGGCAGCT+TGG | + | chr1_3:66350036-66350055 | None:intergenic | 60.0% | |
| CGTACGACGAGGATCCACGT+TGG | + | chr1_3:66350044-66350063 | None:intergenic | 60.0% | |
| ! | GCTCCGATTCCGGTGTTGGA+TGG | + | chr1_3:66349283-66349302 | None:intergenic | 60.0% |
| TCCCATGGTAGCACCCTTGC+CGG | - | chr1_3:66349394-66349413 | Msa0134770:CDS | 60.0% | |
| !! | ACCGGCAAGGGTGCTACCAT+GGG | + | chr1_3:66349398-66349417 | None:intergenic | 60.0% |
| !! | AACCGGCAAGGGTGCTACCA+TGG | + | chr1_3:66349399-66349418 | None:intergenic | 60.0% |
| TAGTGCGCGCAAACCGGCAA+GGG | + | chr1_3:66349410-66349429 | None:intergenic | 60.0% | |
| !! | TCGTCGGGGCGGGTTGAATT+AGG | + | chr1_3:66349965-66349984 | None:intergenic | 60.0% |
| TGCGATCCAAGCTGCCAACG+TGG | - | chr1_3:66350027-66350046 | Msa0134770:intron | 60.0% | |
| GAGGATCCACGTTGGCAGCT+TGG | + | chr1_3:66350036-66350055 | None:intergenic | 60.0% | |
| CGTACGACGAGGATCCACGT+TGG | + | chr1_3:66350044-66350063 | None:intergenic | 60.0% | |
| GGCAGCTCCGATTCCGGTGT+TGG | + | chr1_3:66349287-66349306 | None:intergenic | 65.0% | |
| CTAGTGCGCGCAAACCGGCA+AGG | + | chr1_3:66349411-66349430 | None:intergenic | 65.0% | |
| !! | CTTGCCGGTTTGCGCGCACT+AGG | - | chr1_3:66349409-66349428 | Msa0134770:CDS | 65.0% |
| GACAGGGAATTCGTCGGGGC+GGG | + | chr1_3:66349975-66349994 | None:intergenic | 65.0% | |
| GGACAGGGAATTCGTCGGGG+CGG | + | chr1_3:66349976-66349995 | None:intergenic | 65.0% | |
| GGCAGCTCCGATTCCGGTGT+TGG | + | chr1_3:66349287-66349306 | None:intergenic | 65.0% | |
| CTAGTGCGCGCAAACCGGCA+AGG | + | chr1_3:66349411-66349430 | None:intergenic | 65.0% | |
| !! | CTTGCCGGTTTGCGCGCACT+AGG | - | chr1_3:66349409-66349428 | Msa0134770:CDS | 65.0% |
| GACAGGGAATTCGTCGGGGC+GGG | + | chr1_3:66349975-66349994 | None:intergenic | 65.0% | |
| GGACAGGGAATTCGTCGGGG+CGG | + | chr1_3:66349976-66349995 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 66349072 | 66351234 | 66349072 | ID=Msa0134770;Name=Msa0134770 |
| chr1_3 | mRNA | 66349072 | 66351234 | 66349072 | ID=Msa0134770-mRNA-1;Parent=Msa0134770;Name=Msa0134770-mRNA-1;_AED=0.04;_eAED=0.04;_QI=53|0.75|1|1|1|1|5|286|242 |
| chr1_3 | exon | 66349072 | 66349540 | 66349072 | ID=Msa0134770-mRNA-1:exon:22647;Parent=Msa0134770-mRNA-1 |
| chr1_3 | exon | 66350243 | 66350452 | 66350243 | ID=Msa0134770-mRNA-1:exon:22646;Parent=Msa0134770-mRNA-1 |
| chr1_3 | exon | 66350548 | 66350635 | 66350548 | ID=Msa0134770-mRNA-1:exon:22645;Parent=Msa0134770-mRNA-1 |
| chr1_3 | exon | 66350845 | 66351046 | 66350845 | ID=Msa0134770-mRNA-1:exon:22644;Parent=Msa0134770-mRNA-1 |
| chr1_3 | exon | 66351136 | 66351234 | 66351136 | ID=Msa0134770-mRNA-1:exon:22643;Parent=Msa0134770-mRNA-1 |
| chr1_3 | five_prime_UTR | 66351182 | 66351234 | 66351182 | ID=Msa0134770-mRNA-1:five_prime_utr;Parent=Msa0134770-mRNA-1 |
| chr1_3 | CDS | 66351136 | 66351181 | 66351136 | ID=Msa0134770-mRNA-1:cds;Parent=Msa0134770-mRNA-1 |
| chr1_3 | CDS | 66350845 | 66351046 | 66350845 | ID=Msa0134770-mRNA-1:cds;Parent=Msa0134770-mRNA-1 |
| chr1_3 | CDS | 66350548 | 66350635 | 66350548 | ID=Msa0134770-mRNA-1:cds;Parent=Msa0134770-mRNA-1 |
| chr1_3 | CDS | 66350243 | 66350452 | 66350243 | ID=Msa0134770-mRNA-1:cds;Parent=Msa0134770-mRNA-1 |
| chr1_3 | CDS | 66349358 | 66349540 | 66349358 | ID=Msa0134770-mRNA-1:cds;Parent=Msa0134770-mRNA-1 |
| chr1_3 | three_prime_UTR | 66349072 | 66349357 | 66349072 | ID=Msa0134770-mRNA-1:three_prime_utr;Parent=Msa0134770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
