Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418600 | XP_003592405.1 | 89.394 | 264 | 6 | 1 | 1 | 242 | 1 | 264 | 1.63e-168 | 475 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418600 | B7FKK9 | 89.394 | 264 | 6 | 1 | 1 | 242 | 1 | 264 | 7.80e-169 | 475 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0088470 | Msa0418600 | 0.808222 | 3.442733e-50 | -8.615850e-47 |
| Msa0134770 | Msa0418600 | 0.912441 | 1.940348e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418600 | MtrunA17_Chr1g0205581 | 89.394 | 264 | 6 | 1 | 1 | 242 | 1 | 264 | 1.50e-172 | 475 |
| Msa0418600 | MtrunA17_Chr7g0238911 | 39.483 | 271 | 98 | 3 | 10 | 216 | 15 | 283 | 2.51e-62 | 197 |
| Msa0418600 | MtrunA17_Chr4g0009921 | 39.850 | 266 | 97 | 3 | 8 | 212 | 14 | 277 | 9.70e-62 | 195 |
| Msa0418600 | MtrunA17_Chr1g0193721 | 42.489 | 233 | 106 | 6 | 10 | 222 | 11 | 235 | 1.09e-61 | 194 |
| Msa0418600 | MtrunA17_Chr4g0031841 | 39.113 | 248 | 104 | 5 | 10 | 212 | 15 | 260 | 9.39e-57 | 182 |
| Msa0418600 | MtrunA17_Chr2g0328451 | 36.429 | 280 | 118 | 6 | 3 | 224 | 7 | 284 | 6.91e-55 | 177 |
| Msa0418600 | MtrunA17_Chr4g0009961 | 36.364 | 275 | 107 | 5 | 3 | 212 | 7 | 278 | 1.06e-54 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418600 | AT2G32150.1 | 55.133 | 263 | 87 | 5 | 8 | 242 | 4 | 263 | 9.09e-95 | 278 |
| Msa0418600 | AT2G32150.3 | 70.056 | 177 | 52 | 1 | 8 | 183 | 4 | 180 | 4.90e-88 | 259 |
| Msa0418600 | AT2G32150.2 | 70.056 | 177 | 52 | 1 | 8 | 183 | 4 | 180 | 2.29e-87 | 258 |
| Msa0418600 | AT5G02230.2 | 40.996 | 261 | 105 | 4 | 1 | 214 | 1 | 259 | 3.67e-56 | 181 |
| Msa0418600 | AT5G02230.1 | 40.996 | 261 | 105 | 4 | 1 | 214 | 1 | 259 | 3.67e-56 | 181 |
| Msa0418600 | AT5G02230.3 | 40.996 | 261 | 105 | 4 | 1 | 214 | 38 | 296 | 1.72e-55 | 180 |
| Msa0418600 | AT5G59480.4 | 37.109 | 256 | 113 | 7 | 8 | 218 | 13 | 265 | 5.28e-53 | 173 |
| Msa0418600 | AT5G59480.5 | 37.109 | 256 | 113 | 7 | 8 | 218 | 13 | 265 | 5.28e-53 | 173 |
| Msa0418600 | AT5G59480.3 | 37.109 | 256 | 113 | 7 | 8 | 218 | 13 | 265 | 5.28e-53 | 173 |
| Msa0418600 | AT5G59480.1 | 37.109 | 256 | 113 | 7 | 8 | 218 | 13 | 265 | 5.28e-53 | 173 |
| Msa0418600 | AT3G62040.1 | 42.512 | 207 | 86 | 5 | 40 | 223 | 1 | 197 | 3.12e-51 | 166 |
| Msa0418600 | AT5G59480.2 | 37.109 | 256 | 112 | 8 | 8 | 218 | 13 | 264 | 8.07e-51 | 167 |
| Msa0418600 | AT5G59490.1 | 38.367 | 245 | 120 | 4 | 1 | 216 | 1 | 243 | 2.26e-50 | 166 |
| Msa0418600 | AT5G59490.2 | 44.211 | 190 | 99 | 2 | 1 | 183 | 1 | 190 | 7.25e-48 | 157 |
Find 81 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTGTCTTTGTGCTTATT+TGG | 0.191514 | 3_2:+66370116 | None:intergenic |
| TCGTCGGGGCGGGTTGAATT+AGG | 0.220477 | 3_2:+66371154 | None:intergenic |
| CAGAAGTGATTCCTGAAATA+TGG | 0.228599 | 3_2:-66370284 | Msa0418600:CDS |
| AACTCTGAGGGTGGAAGCTT+TGG | 0.284733 | 3_2:+66371759 | None:intergenic |
| ACTCTACTTCCCCATATTTC+AGG | 0.304394 | 3_2:+66370273 | None:intergenic |
| TACAATCTTCCTTTGGTTGA+TGG | 0.306805 | 3_2:+66371377 | None:intergenic |
| CTTAACGGCAGCTCCGATTC+CGG | 0.322496 | 3_2:+66371828 | None:intergenic |
| TTGTTAGATATTTACGAATT+CGG | 0.336620 | 3_2:-66371269 | Msa0418600:intron |
| CGGGTTGAATTAGGTAGATT+CGG | 0.340373 | 3_2:+66371163 | None:intergenic |
| GTTGAGTGTGATTAGGTAGT+TGG | 0.348044 | 3_2:+66370138 | None:intergenic |
| AGGTTCCTTAACTGAATGTC+TGG | 0.381562 | 3_2:+66371408 | None:intergenic |
| ATCGCGCACAAACAGCGAAT+TGG | 0.385299 | 3_2:-66370229 | Msa0418600:CDS |
| TTGAGTGTGATTAGGTAGTT+GGG | 0.398870 | 3_2:+66370139 | None:intergenic |
| CCCTTCGACTGCATTATCTT+CGG | 0.406216 | 3_2:-66371968 | Msa0418600:intron |
| TTAGAGCGTTGGACAGGCTT+GGG | 0.407036 | 3_2:-66371231 | Msa0418600:CDS |
| TCCCACGGTAGCACCTTTGC+CGG | 0.424135 | 3_2:-66371724 | Msa0418600:CDS |
| AAGAGGACAGGGAATTCGTC+GGG | 0.430210 | 3_2:+66371139 | None:intergenic |
| ATGGACATACAATCTTCCTT+TGG | 0.430892 | 3_2:+66371370 | None:intergenic |
| CTTAGAGCGTTGGACAGGCT+TGG | 0.434451 | 3_2:-66371232 | Msa0418600:CDS |
| TACCCATCCAACACCGGAAT+CGG | 0.434558 | 3_2:-66371841 | Msa0418600:CDS |
| AGAAGTGATTCCTGAAATAT+GGG | 0.441987 | 3_2:-66370283 | Msa0418600:CDS |
| TTATTTGGTTGAGTGTGATT+AGG | 0.444385 | 3_2:+66370131 | None:intergenic |
| TAGTGCGCGCAAACCGGCAA+AGG | 0.445146 | 3_2:+66371711 | None:intergenic |
| TTTGGTTGATGGAACGTAAG+AGG | 0.450307 | 3_2:+66371388 | None:intergenic |
| GCTCCGATTCCGGTGTTGGA+TGG | 0.451001 | 3_2:+66371838 | None:intergenic |
| GACAGGGAATTCGTCGGGGC+GGG | 0.456541 | 3_2:+66371144 | None:intergenic |
| AACGAAGGTTTCAAGAGGAC+AGG | 0.466936 | 3_2:+66371127 | None:intergenic |
| AAATGAATAAATAAATTGTA+TGG | 0.470617 | 3_2:-66370015 | Msa0418600:three_prime_UTR |
| GGCAGCTCCGATTCCGGTGT+TGG | 0.474489 | 3_2:+66371834 | None:intergenic |
| CTCCGATTCCGGTGTTGGAT+GGG | 0.477392 | 3_2:+66371839 | None:intergenic |
| GGGTTGAATTAGGTAGATTC+GGG | 0.478752 | 3_2:+66371164 | None:intergenic |
| TCAAACCAGACATTCAGTTA+AGG | 0.484093 | 3_2:-66371413 | Msa0418600:CDS |
| CTAAGCGCATATACTGCTGT+TGG | 0.493343 | 3_2:-66370198 | Msa0418600:CDS |
| TTCTTAGTTTCGTGCACGGA+AGG | 0.502187 | 3_2:-66371452 | Msa0418600:intron |
| AAACATTGATCTCTTCCTCA+TGG | 0.505692 | 3_2:-66371803 | Msa0418600:CDS |
| TGTCCTCTTGAAACCTTCGT+TGG | 0.512254 | 3_2:-66371125 | Msa0418600:CDS |
| TCCGGTGTTGGATGGGTACA+AGG | 0.513354 | 3_2:+66371846 | None:intergenic |
| GAGGATCCACGTTGGCAGCT+TGG | 0.514928 | 3_2:+66371083 | None:intergenic |
| ATGCACTTAGAGCGTTGGAC+AGG | 0.519534 | 3_2:-66371237 | Msa0418600:CDS |
| TTTGCCGGTTTGCGCGCACT+AGG | 0.523584 | 3_2:-66371709 | Msa0418600:CDS |
| GTTTATTTAGGTTGGGGAGA+CGG | 0.533207 | 3_2:-66370361 | Msa0418600:intron |
| AGCTTGAAAACTGACCTTGT+TGG | 0.533404 | 3_2:-66370175 | Msa0418600:exon |
| ATAGCCTAGTGCGCGCAAAC+CGG | 0.536055 | 3_2:+66371705 | None:intergenic |
| GATTCATGCACTTAGAGCGT+TGG | 0.537491 | 3_2:-66371242 | Msa0418600:CDS |
| AGCTTGGATCGCAATCTTGA+AGG | 0.539852 | 3_2:+66371099 | None:intergenic |
| AGATATTTACGAATTCGGAC+AGG | 0.548364 | 3_2:-66371264 | Msa0418600:CDS |
| AGACAATGAGCAAATAATGT+GGG | 0.551978 | 3_2:-66370102 | Msa0418600:three_prime_UTR |
| ATTTAACAAAACAACAACAA+TGG | 0.555151 | 3_2:-66372011 | Msa0418600:exon |
| CAACGTGGATCCTCGTCGTA+CGG | 0.560427 | 3_2:-66371074 | Msa0418600:intron |
| TGAAATATGGGGAAGTAGAG+TGG | 0.562799 | 3_2:-66370271 | Msa0418600:CDS |
| GGAAGTCAATTCGAATACAT+AGG | 0.562867 | 3_2:+66369960 | None:intergenic |
| TCTGGTTTGATTAATTCGTA+AGG | 0.564418 | 3_2:+66371426 | None:intergenic |
| ACCGAAGATAATGCAGTCGA+AGG | 0.565357 | 3_2:+66371967 | None:intergenic |
| CAAGAGGACAGGGAATTCGT+CGG | 0.575073 | 3_2:+66371138 | None:intergenic |
| TTTAAAGAGTTCAACTCTGA+GGG | 0.583777 | 3_2:+66371747 | None:intergenic |
| GTTGAACTCTTTAAATCCCA+CGG | 0.595556 | 3_2:-66371739 | Msa0418600:CDS |
| CAACGTTGGGGACTATGTAG+TGG | 0.595607 | 3_2:-66370331 | Msa0418600:CDS |
| GTTCTTCTTAGTTTCGTGCA+CGG | 0.597143 | 3_2:-66371456 | Msa0418600:intron |
| ATAATGCAGTCGAAGGGAGA+AGG | 0.598311 | 3_2:+66371974 | None:intergenic |
| AACCGGCAAAGGTGCTACCG+TGG | 0.606005 | 3_2:+66371722 | None:intergenic |
| ATACCTGTGGTATTCTTCTG+CGG | 0.609323 | 3_2:+66371675 | None:intergenic |
| ACCTTGTACCCATCCAACAC+CGG | 0.610346 | 3_2:-66371847 | Msa0418600:CDS |
| AAAGAGTTCAACTCTGAGGG+TGG | 0.612715 | 3_2:+66371750 | None:intergenic |
| ACCGGCAAAGGTGCTACCGT+GGG | 0.616237 | 3_2:+66371723 | None:intergenic |
| AAGACAATGAGCAAATAATG+TGG | 0.617132 | 3_2:-66370103 | Msa0418600:three_prime_UTR |
| GGACAGGGAATTCGTCGGGG+CGG | 0.619508 | 3_2:+66371143 | None:intergenic |
| CCGAAGATAATGCAGTCGAA+GGG | 0.620542 | 3_2:+66371968 | None:intergenic |
| ATCTTGAAGGCATCCAACGA+AGG | 0.622873 | 3_2:+66371112 | None:intergenic |
| ATTTAAAGAGTTCAACTCTG+AGG | 0.633078 | 3_2:+66371746 | None:intergenic |
| GACAATGAGCAAATAATGTG+GGG | 0.639085 | 3_2:-66370101 | Msa0418600:three_prime_UTR |
| ACGAAGGTTTCAAGAGGACA+GGG | 0.645747 | 3_2:+66371128 | None:intergenic |
| TCACCGCAGAAGAATACCAC+AGG | 0.655318 | 3_2:-66371678 | Msa0418600:intron |
| AGTCAATTCGAATACATAGG+AGG | 0.658307 | 3_2:+66369963 | None:intergenic |
| TGCGATCCAAGCTGCCAACG+TGG | 0.658698 | 3_2:-66371089 | Msa0418600:CDS |
| CATCCAACGAAGGTTTCAAG+AGG | 0.662600 | 3_2:+66371122 | None:intergenic |
| AGTTGACTCACCGTACGACG+AGG | 0.671211 | 3_2:+66371064 | None:intergenic |
| TCTTACGTTCCATCAACCAA+AGG | 0.686021 | 3_2:-66371386 | Msa0418600:CDS |
| AGAGGACAGGGAATTCGTCG+GGG | 0.686285 | 3_2:+66371140 | None:intergenic |
| GTATGTACAAACATCCAACA+AGG | 0.720184 | 3_2:+66370161 | None:intergenic |
| GAAGTGATTCCTGAAATATG+GGG | 0.730085 | 3_2:-66370282 | Msa0418600:CDS |
| CGTACGACGAGGATCCACGT+TGG | 0.778989 | 3_2:+66371075 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATTAAGATTAGAAAA+TGG | + | chr3_2:66370602-66370621 | None:intergenic | 10.0% |
| !!! | CTTGAAATTATTATTATTTT+TGG | - | chr3_2:66370625-66370644 | Msa0418600:intron | 10.0% |
| !! | AAATGAATAAATAAATTGTA+TGG | - | chr3_2:66371935-66371954 | Msa0418600:intron | 10.0% |
| !! | AATAAATTAAGATTAGAAAA+TGG | + | chr3_2:66370602-66370621 | None:intergenic | 10.0% |
| !!! | CTTGAAATTATTATTATTTT+TGG | - | chr3_2:66370625-66370644 | Msa0418600:intron | 10.0% |
| !! | AAATGAATAAATAAATTGTA+TGG | - | chr3_2:66371935-66371954 | Msa0418600:intron | 10.0% |
| !! | ATACATACTACTAATTAATT+TGG | + | chr3_2:66370456-66370475 | None:intergenic | 15.0% |
| !!! | TTGGTATATATTTCTAATTT+TGG | - | chr3_2:66370644-66370663 | Msa0418600:intron | 15.0% |
| !! | TGTCAAATTGTTTATAATTA+TGG | - | chr3_2:66371058-66371077 | Msa0418600:intron | 15.0% |
| !! | ATACATACTACTAATTAATT+TGG | + | chr3_2:66370456-66370475 | None:intergenic | 15.0% |
| !!! | TTGGTATATATTTCTAATTT+TGG | - | chr3_2:66370644-66370663 | Msa0418600:intron | 15.0% |
| !! | TGTCAAATTGTTTATAATTA+TGG | - | chr3_2:66371058-66371077 | Msa0418600:intron | 15.0% |
| !! | ATTTAACAAAACAACAACAA+TGG | - | chr3_2:66369939-66369958 | Msa0418600:three_prime_UTR | 20.0% |
| !! | AATTGAAGAAGTTTGTAAAT+TGG | + | chr3_2:66370035-66370054 | None:intergenic | 20.0% |
| !! | ATTTATTGATCAAACAGATT+TGG | - | chr3_2:66370075-66370094 | Msa0418600:three_prime_UTR | 20.0% |
| !! | TTGTTAGATATTTACGAATT+CGG | - | chr3_2:66370681-66370700 | Msa0418600:intron | 20.0% |
| !!! | TTATAATTATGGTGTTGATT+TGG | - | chr3_2:66371069-66371088 | Msa0418600:intron | 20.0% |
| !!! | TTTGGAATTGCATTAAATAA+TGG | - | chr3_2:66371164-66371183 | Msa0418600:CDS | 20.0% |
| !! | TGAGATTTAATTGTCATATA+TGG | + | chr3_2:66371272-66371291 | None:intergenic | 20.0% |
| !! | TTGCAAGTAAATATTAACTT+TGG | + | chr3_2:66371403-66371422 | None:intergenic | 20.0% |
| !! | GTATGTATATGTGTTTATTT+AGG | - | chr3_2:66371577-66371596 | Msa0418600:intron | 20.0% |
| !!! | TATATGTGTTTATTTAGGTT+GGG | - | chr3_2:66371582-66371601 | Msa0418600:intron | 20.0% |
| !!! | ATTTAGAAGTTTTACAAGTT+TGG | + | chr3_2:66372014-66372033 | None:intergenic | 20.0% |
| !! | ATTTAACAAAACAACAACAA+TGG | - | chr3_2:66369939-66369958 | Msa0418600:three_prime_UTR | 20.0% |
| !! | AATTGAAGAAGTTTGTAAAT+TGG | + | chr3_2:66370035-66370054 | None:intergenic | 20.0% |
| !! | ATTTATTGATCAAACAGATT+TGG | - | chr3_2:66370075-66370094 | Msa0418600:three_prime_UTR | 20.0% |
| !! | TTGTTAGATATTTACGAATT+CGG | - | chr3_2:66370681-66370700 | Msa0418600:intron | 20.0% |
| !!! | TTATAATTATGGTGTTGATT+TGG | - | chr3_2:66371069-66371088 | Msa0418600:intron | 20.0% |
| !!! | TTTGGAATTGCATTAAATAA+TGG | - | chr3_2:66371164-66371183 | Msa0418600:CDS | 20.0% |
| !! | TGAGATTTAATTGTCATATA+TGG | + | chr3_2:66371272-66371291 | None:intergenic | 20.0% |
| !! | TTGCAAGTAAATATTAACTT+TGG | + | chr3_2:66371403-66371422 | None:intergenic | 20.0% |
| !! | GTATGTATATGTGTTTATTT+AGG | - | chr3_2:66371577-66371596 | Msa0418600:intron | 20.0% |
| !!! | TATATGTGTTTATTTAGGTT+GGG | - | chr3_2:66371582-66371601 | Msa0418600:intron | 20.0% |
| !!! | ATTTAGAAGTTTTACAAGTT+TGG | + | chr3_2:66372014-66372033 | None:intergenic | 20.0% |
| !! | GAGATCAATGTTTTTCTTAA+CGG | + | chr3_2:66370140-66370159 | None:intergenic | 25.0% |
| ! | TTAAGTTTATGCCAAAATCT+CGG | + | chr3_2:66370381-66370400 | None:intergenic | 25.0% |
| !! | GAAAAAGAATTGAGTTGTTA+AGG | - | chr3_2:66371102-66371121 | Msa0418600:CDS | 25.0% |
| !! | TCAATTAAATTAGTGCTGTT+TGG | + | chr3_2:66371513-66371532 | None:intergenic | 25.0% |
| ! | GTATATGTGTTTATTTAGGT+TGG | - | chr3_2:66371581-66371600 | Msa0418600:intron | 25.0% |
| !!! | ATATGTGTTTATTTAGGTTG+GGG | - | chr3_2:66371583-66371602 | Msa0418600:intron | 25.0% |
| !! | GAGATCAATGTTTTTCTTAA+CGG | + | chr3_2:66370140-66370159 | None:intergenic | 25.0% |
| ! | TTAAGTTTATGCCAAAATCT+CGG | + | chr3_2:66370381-66370400 | None:intergenic | 25.0% |
| !! | GAAAAAGAATTGAGTTGTTA+AGG | - | chr3_2:66371102-66371121 | Msa0418600:CDS | 25.0% |
| !! | TCAATTAAATTAGTGCTGTT+TGG | + | chr3_2:66371513-66371532 | None:intergenic | 25.0% |
| ! | GTATATGTGTTTATTTAGGT+TGG | - | chr3_2:66371581-66371600 | Msa0418600:intron | 25.0% |
| !!! | ATATGTGTTTATTTAGGTTG+GGG | - | chr3_2:66371583-66371602 | Msa0418600:intron | 25.0% |
| TTTAAAGAGTTCAACTCTGA+GGG | + | chr3_2:66370206-66370225 | None:intergenic | 30.0% | |
| ATTTAAAGAGTTCAACTCTG+AGG | + | chr3_2:66370207-66370226 | None:intergenic | 30.0% | |
| AGCAAACAAACGAACAAATT+AGG | + | chr3_2:66370308-66370327 | None:intergenic | 30.0% | |
| ! | TCTGGTTTGATTAATTCGTA+AGG | + | chr3_2:66370527-66370546 | None:intergenic | 30.0% |
| AGTTAACAGTTAGCTAACTT+TGG | - | chr3_2:66371146-66371165 | Msa0418600:CDS | 30.0% | |
| TGCGACTATAACTTCATAAA+GGG | + | chr3_2:66371225-66371244 | None:intergenic | 30.0% | |
| TTGCGACTATAACTTCATAA+AGG | + | chr3_2:66371226-66371245 | None:intergenic | 30.0% | |
| GTAAAATTACCAAAACAGTG+TGG | + | chr3_2:66371377-66371396 | None:intergenic | 30.0% | |
| AGAAGTGATTCCTGAAATAT+GGG | - | chr3_2:66371667-66371686 | Msa0418600:intron | 30.0% | |
| TTATTTGGTTGAGTGTGATT+AGG | + | chr3_2:66371822-66371841 | None:intergenic | 30.0% | |
| TCATTGTCTTTGTGCTTATT+TGG | + | chr3_2:66371837-66371856 | None:intergenic | 30.0% | |
| AAGACAATGAGCAAATAATG+TGG | - | chr3_2:66371847-66371866 | Msa0418600:CDS | 30.0% | |
| AGACAATGAGCAAATAATGT+GGG | - | chr3_2:66371848-66371867 | Msa0418600:CDS | 30.0% | |
| TTTAAAGAGTTCAACTCTGA+GGG | + | chr3_2:66370206-66370225 | None:intergenic | 30.0% | |
| ATTTAAAGAGTTCAACTCTG+AGG | + | chr3_2:66370207-66370226 | None:intergenic | 30.0% | |
| AGCAAACAAACGAACAAATT+AGG | + | chr3_2:66370308-66370327 | None:intergenic | 30.0% | |
| ! | TCTGGTTTGATTAATTCGTA+AGG | + | chr3_2:66370527-66370546 | None:intergenic | 30.0% |
| AGTTAACAGTTAGCTAACTT+TGG | - | chr3_2:66371146-66371165 | Msa0418600:CDS | 30.0% | |
| TGCGACTATAACTTCATAAA+GGG | + | chr3_2:66371225-66371244 | None:intergenic | 30.0% | |
| TTGCGACTATAACTTCATAA+AGG | + | chr3_2:66371226-66371245 | None:intergenic | 30.0% | |
| GTAAAATTACCAAAACAGTG+TGG | + | chr3_2:66371377-66371396 | None:intergenic | 30.0% | |
| AGAAGTGATTCCTGAAATAT+GGG | - | chr3_2:66371667-66371686 | Msa0418600:intron | 30.0% | |
| TTATTTGGTTGAGTGTGATT+AGG | + | chr3_2:66371822-66371841 | None:intergenic | 30.0% | |
| TCATTGTCTTTGTGCTTATT+TGG | + | chr3_2:66371837-66371856 | None:intergenic | 30.0% | |
| AAGACAATGAGCAAATAATG+TGG | - | chr3_2:66371847-66371866 | Msa0418600:CDS | 30.0% | |
| AGACAATGAGCAAATAATGT+GGG | - | chr3_2:66371848-66371867 | Msa0418600:CDS | 30.0% | |
| AAACATTGATCTCTTCCTCA+TGG | - | chr3_2:66370147-66370166 | Msa0418600:three_prime_UTR | 35.0% | |
| ! | AGAAACCACATTTTTCCATG+AGG | + | chr3_2:66370165-66370184 | None:intergenic | 35.0% |
| GTTGAACTCTTTAAATCCCA+CGG | - | chr3_2:66370211-66370230 | Msa0418600:CDS | 35.0% | |
| AGAATACCACAGGTATAACT+TGG | - | chr3_2:66370282-66370301 | Msa0418600:CDS | 35.0% | |
| !!! | GCACGATTTTGAAATATCCA+CGG | + | chr3_2:66370335-66370354 | None:intergenic | 35.0% |
| GTGCTACACTCTATATCTTA+TGG | - | chr3_2:66370351-66370370 | Msa0418600:CDS | 35.0% | |
| TCAAACCAGACATTCAGTTA+AGG | - | chr3_2:66370537-66370556 | Msa0418600:intron | 35.0% | |
| TACAATCTTCCTTTGGTTGA+TGG | + | chr3_2:66370576-66370595 | None:intergenic | 35.0% | |
| ATGGACATACAATCTTCCTT+TGG | + | chr3_2:66370583-66370602 | None:intergenic | 35.0% | |
| AGATATTTACGAATTCGGAC+AGG | - | chr3_2:66370686-66370705 | Msa0418600:intron | 35.0% | |
| !! | TCTTCTTTTGCAGTTGTTTC+TGG | - | chr3_2:66371308-66371327 | Msa0418600:intron | 35.0% |
| ATCATTGCGGGTAAAGAAAT+GGG | - | chr3_2:66371348-66371367 | Msa0418600:intron | 35.0% | |
| TACAAAATCACAGTGACTCA+AGG | + | chr3_2:66371457-66371476 | None:intergenic | 35.0% | |
| ! | CAATTTGTTTGTCAGAATCG+TGG | + | chr3_2:66371482-66371501 | None:intergenic | 35.0% |
| CAGAAGTGATTCCTGAAATA+TGG | - | chr3_2:66371666-66371685 | Msa0418600:intron | 35.0% | |
| GAAGTGATTCCTGAAATATG+GGG | - | chr3_2:66371668-66371687 | Msa0418600:intron | 35.0% | |
| GTATGTACAAACATCCAACA+AGG | + | chr3_2:66371792-66371811 | None:intergenic | 35.0% | |
| TTGAGTGTGATTAGGTAGTT+GGG | + | chr3_2:66371814-66371833 | None:intergenic | 35.0% | |
| GACAATGAGCAAATAATGTG+GGG | - | chr3_2:66371849-66371868 | Msa0418600:CDS | 35.0% | |
| AGTCAATTCGAATACATAGG+AGG | + | chr3_2:66371990-66372009 | None:intergenic | 35.0% | |
| GGAAGTCAATTCGAATACAT+AGG | + | chr3_2:66371993-66372012 | None:intergenic | 35.0% | |
| AAACATTGATCTCTTCCTCA+TGG | - | chr3_2:66370147-66370166 | Msa0418600:three_prime_UTR | 35.0% | |
| ! | AGAAACCACATTTTTCCATG+AGG | + | chr3_2:66370165-66370184 | None:intergenic | 35.0% |
| GTTGAACTCTTTAAATCCCA+CGG | - | chr3_2:66370211-66370230 | Msa0418600:CDS | 35.0% | |
| AGAATACCACAGGTATAACT+TGG | - | chr3_2:66370282-66370301 | Msa0418600:CDS | 35.0% | |
| !!! | GCACGATTTTGAAATATCCA+CGG | + | chr3_2:66370335-66370354 | None:intergenic | 35.0% |
| GTGCTACACTCTATATCTTA+TGG | - | chr3_2:66370351-66370370 | Msa0418600:CDS | 35.0% | |
| TCAAACCAGACATTCAGTTA+AGG | - | chr3_2:66370537-66370556 | Msa0418600:intron | 35.0% | |
| TACAATCTTCCTTTGGTTGA+TGG | + | chr3_2:66370576-66370595 | None:intergenic | 35.0% | |
| ATGGACATACAATCTTCCTT+TGG | + | chr3_2:66370583-66370602 | None:intergenic | 35.0% | |
| AGATATTTACGAATTCGGAC+AGG | - | chr3_2:66370686-66370705 | Msa0418600:intron | 35.0% | |
| !! | TCTTCTTTTGCAGTTGTTTC+TGG | - | chr3_2:66371308-66371327 | Msa0418600:intron | 35.0% |
| ATCATTGCGGGTAAAGAAAT+GGG | - | chr3_2:66371348-66371367 | Msa0418600:intron | 35.0% | |
| TACAAAATCACAGTGACTCA+AGG | + | chr3_2:66371457-66371476 | None:intergenic | 35.0% | |
| ! | CAATTTGTTTGTCAGAATCG+TGG | + | chr3_2:66371482-66371501 | None:intergenic | 35.0% |
| CAGAAGTGATTCCTGAAATA+TGG | - | chr3_2:66371666-66371685 | Msa0418600:intron | 35.0% | |
| GAAGTGATTCCTGAAATATG+GGG | - | chr3_2:66371668-66371687 | Msa0418600:intron | 35.0% | |
| GTATGTACAAACATCCAACA+AGG | + | chr3_2:66371792-66371811 | None:intergenic | 35.0% | |
| TTGAGTGTGATTAGGTAGTT+GGG | + | chr3_2:66371814-66371833 | None:intergenic | 35.0% | |
| GACAATGAGCAAATAATGTG+GGG | - | chr3_2:66371849-66371868 | Msa0418600:CDS | 35.0% | |
| AGTCAATTCGAATACATAGG+AGG | + | chr3_2:66371990-66372009 | None:intergenic | 35.0% | |
| GGAAGTCAATTCGAATACAT+AGG | + | chr3_2:66371993-66372012 | None:intergenic | 35.0% | |
| CTCTTCCTCATGGAAAAATG+TGG | - | chr3_2:66370157-66370176 | Msa0418600:three_prime_UTR | 40.0% | |
| ATACCTGTGGTATTCTTCTG+CGG | + | chr3_2:66370278-66370297 | None:intergenic | 40.0% | |
| ATTAGGCCAAGTTATACCTG+TGG | + | chr3_2:66370291-66370310 | None:intergenic | 40.0% | |
| ! | CTTATGGATCACCGAGATTT+TGG | - | chr3_2:66370367-66370386 | Msa0418600:intron | 40.0% |
| GTTCTTCTTAGTTTCGTGCA+CGG | - | chr3_2:66370494-66370513 | Msa0418600:intron | 40.0% | |
| AGGTTCCTTAACTGAATGTC+TGG | + | chr3_2:66370545-66370564 | None:intergenic | 40.0% | |
| !! | TTTGGTTGATGGAACGTAAG+AGG | + | chr3_2:66370565-66370584 | None:intergenic | 40.0% |
| TCTTACGTTCCATCAACCAA+AGG | - | chr3_2:66370564-66370583 | Msa0418600:intron | 40.0% | |
| GGGTTGAATTAGGTAGATTC+GGG | + | chr3_2:66370789-66370808 | None:intergenic | 40.0% | |
| ! | CGGGTTGAATTAGGTAGATT+CGG | + | chr3_2:66370790-66370809 | None:intergenic | 40.0% |
| CAGTGTTCGAAACATCATTG+CGG | - | chr3_2:66371335-66371354 | Msa0418600:intron | 40.0% | |
| AGTGTTCGAAACATCATTGC+GGG | - | chr3_2:66371336-66371355 | Msa0418600:intron | 40.0% | |
| CATCATTGCGGGTAAAGAAA+TGG | - | chr3_2:66371347-66371366 | Msa0418600:intron | 40.0% | |
| !! | GTTTATTTAGGTTGGGGAGA+CGG | - | chr3_2:66371589-66371608 | Msa0418600:intron | 40.0% |
| AGACGGTGAAAAACAACGTT+GGG | - | chr3_2:66371606-66371625 | Msa0418600:intron | 40.0% | |
| ACTCTACTTCCCCATATTTC+AGG | + | chr3_2:66371680-66371699 | None:intergenic | 40.0% | |
| TGAAATATGGGGAAGTAGAG+TGG | - | chr3_2:66371679-66371698 | Msa0418600:CDS | 40.0% | |
| AGCTTGAAAACTGACCTTGT+TGG | - | chr3_2:66371775-66371794 | Msa0418600:CDS | 40.0% | |
| GTTGAGTGTGATTAGGTAGT+TGG | + | chr3_2:66371815-66371834 | None:intergenic | 40.0% | |
| CTCTTCCTCATGGAAAAATG+TGG | - | chr3_2:66370157-66370176 | Msa0418600:three_prime_UTR | 40.0% | |
| ATACCTGTGGTATTCTTCTG+CGG | + | chr3_2:66370278-66370297 | None:intergenic | 40.0% | |
| ATTAGGCCAAGTTATACCTG+TGG | + | chr3_2:66370291-66370310 | None:intergenic | 40.0% | |
| ! | CTTATGGATCACCGAGATTT+TGG | - | chr3_2:66370367-66370386 | Msa0418600:intron | 40.0% |
| GTTCTTCTTAGTTTCGTGCA+CGG | - | chr3_2:66370494-66370513 | Msa0418600:intron | 40.0% | |
| AGGTTCCTTAACTGAATGTC+TGG | + | chr3_2:66370545-66370564 | None:intergenic | 40.0% | |
| !! | TTTGGTTGATGGAACGTAAG+AGG | + | chr3_2:66370565-66370584 | None:intergenic | 40.0% |
| TCTTACGTTCCATCAACCAA+AGG | - | chr3_2:66370564-66370583 | Msa0418600:intron | 40.0% | |
| GGGTTGAATTAGGTAGATTC+GGG | + | chr3_2:66370789-66370808 | None:intergenic | 40.0% | |
| ! | CGGGTTGAATTAGGTAGATT+CGG | + | chr3_2:66370790-66370809 | None:intergenic | 40.0% |
| CAGTGTTCGAAACATCATTG+CGG | - | chr3_2:66371335-66371354 | Msa0418600:intron | 40.0% | |
| AGTGTTCGAAACATCATTGC+GGG | - | chr3_2:66371336-66371355 | Msa0418600:intron | 40.0% | |
| CATCATTGCGGGTAAAGAAA+TGG | - | chr3_2:66371347-66371366 | Msa0418600:intron | 40.0% | |
| !! | GTTTATTTAGGTTGGGGAGA+CGG | - | chr3_2:66371589-66371608 | Msa0418600:intron | 40.0% |
| AGACGGTGAAAAACAACGTT+GGG | - | chr3_2:66371606-66371625 | Msa0418600:intron | 40.0% | |
| ACTCTACTTCCCCATATTTC+AGG | + | chr3_2:66371680-66371699 | None:intergenic | 40.0% | |
| TGAAATATGGGGAAGTAGAG+TGG | - | chr3_2:66371679-66371698 | Msa0418600:CDS | 40.0% | |
| AGCTTGAAAACTGACCTTGT+TGG | - | chr3_2:66371775-66371794 | Msa0418600:CDS | 40.0% | |
| GTTGAGTGTGATTAGGTAGT+TGG | + | chr3_2:66371815-66371834 | None:intergenic | 40.0% | |
| ATAATGCAGTCGAAGGGAGA+AGG | + | chr3_2:66369979-66369998 | None:intergenic | 45.0% | |
| CCGAAGATAATGCAGTCGAA+GGG | + | chr3_2:66369985-66370004 | None:intergenic | 45.0% | |
| CCCTTCGACTGCATTATCTT+CGG | - | chr3_2:66369982-66370001 | Msa0418600:three_prime_UTR | 45.0% | |
| ACCGAAGATAATGCAGTCGA+AGG | + | chr3_2:66369986-66370005 | None:intergenic | 45.0% | |
| ! | AAAGAGTTCAACTCTGAGGG+TGG | + | chr3_2:66370203-66370222 | None:intergenic | 45.0% |
| TCGTTTGTTTGCTTTCACCG+TGG | - | chr3_2:66370315-66370334 | Msa0418600:CDS | 45.0% | |
| TTCTTAGTTTCGTGCACGGA+AGG | - | chr3_2:66370498-66370517 | Msa0418600:intron | 45.0% | |
| GATTCATGCACTTAGAGCGT+TGG | - | chr3_2:66370708-66370727 | Msa0418600:intron | 45.0% | |
| ACGAAGGTTTCAAGAGGACA+GGG | + | chr3_2:66370825-66370844 | None:intergenic | 45.0% | |
| AACGAAGGTTTCAAGAGGAC+AGG | + | chr3_2:66370826-66370845 | None:intergenic | 45.0% | |
| TGTCCTCTTGAAACCTTCGT+TGG | - | chr3_2:66370825-66370844 | Msa0418600:intron | 45.0% | |
| CATCCAACGAAGGTTTCAAG+AGG | + | chr3_2:66370831-66370850 | None:intergenic | 45.0% | |
| !! | ATCTTGAAGGCATCCAACGA+AGG | + | chr3_2:66370841-66370860 | None:intergenic | 45.0% |
| AGCTTGGATCGCAATCTTGA+AGG | + | chr3_2:66370854-66370873 | None:intergenic | 45.0% | |
| CCGTCATTCACAAGTCGTTA+CGG | + | chr3_2:66370923-66370942 | None:intergenic | 45.0% | |
| CCGTAACGACTTGTGAATGA+CGG | - | chr3_2:66370920-66370939 | Msa0418600:intron | 45.0% | |
| ! | AATGGGTCTCCACACTGTTT+TGG | - | chr3_2:66371365-66371384 | Msa0418600:intron | 45.0% |
| GAGACGGTGAAAAACAACGT+TGG | - | chr3_2:66371605-66371624 | Msa0418600:intron | 45.0% | |
| GACGGTGAAAAACAACGTTG+GGG | - | chr3_2:66371607-66371626 | Msa0418600:intron | 45.0% | |
| CTAAGCGCATATACTGCTGT+TGG | - | chr3_2:66371752-66371771 | Msa0418600:CDS | 45.0% | |
| ATAATGCAGTCGAAGGGAGA+AGG | + | chr3_2:66369979-66369998 | None:intergenic | 45.0% | |
| CCGAAGATAATGCAGTCGAA+GGG | + | chr3_2:66369985-66370004 | None:intergenic | 45.0% | |
| CCCTTCGACTGCATTATCTT+CGG | - | chr3_2:66369982-66370001 | Msa0418600:three_prime_UTR | 45.0% | |
| ACCGAAGATAATGCAGTCGA+AGG | + | chr3_2:66369986-66370005 | None:intergenic | 45.0% | |
| ! | AAAGAGTTCAACTCTGAGGG+TGG | + | chr3_2:66370203-66370222 | None:intergenic | 45.0% |
| TCGTTTGTTTGCTTTCACCG+TGG | - | chr3_2:66370315-66370334 | Msa0418600:CDS | 45.0% | |
| TTCTTAGTTTCGTGCACGGA+AGG | - | chr3_2:66370498-66370517 | Msa0418600:intron | 45.0% | |
| GATTCATGCACTTAGAGCGT+TGG | - | chr3_2:66370708-66370727 | Msa0418600:intron | 45.0% | |
| ACGAAGGTTTCAAGAGGACA+GGG | + | chr3_2:66370825-66370844 | None:intergenic | 45.0% | |
| AACGAAGGTTTCAAGAGGAC+AGG | + | chr3_2:66370826-66370845 | None:intergenic | 45.0% | |
| TGTCCTCTTGAAACCTTCGT+TGG | - | chr3_2:66370825-66370844 | Msa0418600:intron | 45.0% | |
| CATCCAACGAAGGTTTCAAG+AGG | + | chr3_2:66370831-66370850 | None:intergenic | 45.0% | |
| !! | ATCTTGAAGGCATCCAACGA+AGG | + | chr3_2:66370841-66370860 | None:intergenic | 45.0% |
| AGCTTGGATCGCAATCTTGA+AGG | + | chr3_2:66370854-66370873 | None:intergenic | 45.0% | |
| CCGTCATTCACAAGTCGTTA+CGG | + | chr3_2:66370923-66370942 | None:intergenic | 45.0% | |
| CCGTAACGACTTGTGAATGA+CGG | - | chr3_2:66370920-66370939 | Msa0418600:intron | 45.0% | |
| ! | AATGGGTCTCCACACTGTTT+TGG | - | chr3_2:66371365-66371384 | Msa0418600:intron | 45.0% |
| GAGACGGTGAAAAACAACGT+TGG | - | chr3_2:66371605-66371624 | Msa0418600:intron | 45.0% | |
| GACGGTGAAAAACAACGTTG+GGG | - | chr3_2:66371607-66371626 | Msa0418600:intron | 45.0% | |
| CTAAGCGCATATACTGCTGT+TGG | - | chr3_2:66371752-66371771 | Msa0418600:CDS | 45.0% | |
| ACCTTGTACCCATCCAACAC+CGG | - | chr3_2:66370103-66370122 | Msa0418600:three_prime_UTR | 50.0% | |
| TACCCATCCAACACCGGAAT+CGG | - | chr3_2:66370109-66370128 | Msa0418600:three_prime_UTR | 50.0% | |
| ! | AACTCTGAGGGTGGAAGCTT+TGG | + | chr3_2:66370194-66370213 | None:intergenic | 50.0% |
| TCACCGCAGAAGAATACCAC+AGG | - | chr3_2:66370272-66370291 | Msa0418600:CDS | 50.0% | |
| !! | ATGCACTTAGAGCGTTGGAC+AGG | - | chr3_2:66370713-66370732 | Msa0418600:intron | 50.0% |
| !! | TTAGAGCGTTGGACAGGCTT+GGG | - | chr3_2:66370719-66370738 | Msa0418600:intron | 50.0% |
| AAGAGGACAGGGAATTCGTC+GGG | + | chr3_2:66370814-66370833 | None:intergenic | 50.0% | |
| CAAGAGGACAGGGAATTCGT+CGG | + | chr3_2:66370815-66370834 | None:intergenic | 50.0% | |
| CAACGTTGGGGACTATGTAG+TGG | - | chr3_2:66371619-66371638 | Msa0418600:intron | 50.0% | |
| ATCGCGCACAAACAGCGAAT+TGG | - | chr3_2:66371721-66371740 | Msa0418600:CDS | 50.0% | |
| ACCTTGTACCCATCCAACAC+CGG | - | chr3_2:66370103-66370122 | Msa0418600:three_prime_UTR | 50.0% | |
| TACCCATCCAACACCGGAAT+CGG | - | chr3_2:66370109-66370128 | Msa0418600:three_prime_UTR | 50.0% | |
| ! | AACTCTGAGGGTGGAAGCTT+TGG | + | chr3_2:66370194-66370213 | None:intergenic | 50.0% |
| TCACCGCAGAAGAATACCAC+AGG | - | chr3_2:66370272-66370291 | Msa0418600:CDS | 50.0% | |
| !! | ATGCACTTAGAGCGTTGGAC+AGG | - | chr3_2:66370713-66370732 | Msa0418600:intron | 50.0% |
| !! | TTAGAGCGTTGGACAGGCTT+GGG | - | chr3_2:66370719-66370738 | Msa0418600:intron | 50.0% |
| AAGAGGACAGGGAATTCGTC+GGG | + | chr3_2:66370814-66370833 | None:intergenic | 50.0% | |
| CAAGAGGACAGGGAATTCGT+CGG | + | chr3_2:66370815-66370834 | None:intergenic | 50.0% | |
| CAACGTTGGGGACTATGTAG+TGG | - | chr3_2:66371619-66371638 | Msa0418600:intron | 50.0% | |
| ATCGCGCACAAACAGCGAAT+TGG | - | chr3_2:66371721-66371740 | Msa0418600:CDS | 50.0% | |
| ! | TCCGGTGTTGGATGGGTACA+AGG | + | chr3_2:66370107-66370126 | None:intergenic | 55.0% |
| ! | CTCCGATTCCGGTGTTGGAT+GGG | + | chr3_2:66370114-66370133 | None:intergenic | 55.0% |
| CTTAACGGCAGCTCCGATTC+CGG | + | chr3_2:66370125-66370144 | None:intergenic | 55.0% | |
| ATAGCCTAGTGCGCGCAAAC+CGG | + | chr3_2:66370248-66370267 | None:intergenic | 55.0% | |
| !! | CTTAGAGCGTTGGACAGGCT+TGG | - | chr3_2:66370718-66370737 | Msa0418600:intron | 55.0% |
| AGAGGACAGGGAATTCGTCG+GGG | + | chr3_2:66370813-66370832 | None:intergenic | 55.0% | |
| CAACGTGGATCCTCGTCGTA+CGG | - | chr3_2:66370876-66370895 | Msa0418600:intron | 55.0% | |
| ! | AGTTGACTCACCGTACGACG+AGG | + | chr3_2:66370889-66370908 | None:intergenic | 55.0% |
| ! | TCCGGTGTTGGATGGGTACA+AGG | + | chr3_2:66370107-66370126 | None:intergenic | 55.0% |
| ! | CTCCGATTCCGGTGTTGGAT+GGG | + | chr3_2:66370114-66370133 | None:intergenic | 55.0% |
| CTTAACGGCAGCTCCGATTC+CGG | + | chr3_2:66370125-66370144 | None:intergenic | 55.0% | |
| ATAGCCTAGTGCGCGCAAAC+CGG | + | chr3_2:66370248-66370267 | None:intergenic | 55.0% | |
| !! | CTTAGAGCGTTGGACAGGCT+TGG | - | chr3_2:66370718-66370737 | Msa0418600:intron | 55.0% |
| AGAGGACAGGGAATTCGTCG+GGG | + | chr3_2:66370813-66370832 | None:intergenic | 55.0% | |
| CAACGTGGATCCTCGTCGTA+CGG | - | chr3_2:66370876-66370895 | Msa0418600:intron | 55.0% | |
| ! | AGTTGACTCACCGTACGACG+AGG | + | chr3_2:66370889-66370908 | None:intergenic | 55.0% |
| ! | GCTCCGATTCCGGTGTTGGA+TGG | + | chr3_2:66370115-66370134 | None:intergenic | 60.0% |
| TCCCACGGTAGCACCTTTGC+CGG | - | chr3_2:66370226-66370245 | Msa0418600:CDS | 60.0% | |
| !! | ACCGGCAAAGGTGCTACCGT+GGG | + | chr3_2:66370230-66370249 | None:intergenic | 60.0% |
| !! | AACCGGCAAAGGTGCTACCG+TGG | + | chr3_2:66370231-66370250 | None:intergenic | 60.0% |
| TAGTGCGCGCAAACCGGCAA+AGG | + | chr3_2:66370242-66370261 | None:intergenic | 60.0% | |
| !! | TTTGCCGGTTTGCGCGCACT+AGG | - | chr3_2:66370241-66370260 | Msa0418600:CDS | 60.0% |
| !! | TCGTCGGGGCGGGTTGAATT+AGG | + | chr3_2:66370799-66370818 | None:intergenic | 60.0% |
| TGCGATCCAAGCTGCCAACG+TGG | - | chr3_2:66370861-66370880 | Msa0418600:intron | 60.0% | |
| GAGGATCCACGTTGGCAGCT+TGG | + | chr3_2:66370870-66370889 | None:intergenic | 60.0% | |
| CGTACGACGAGGATCCACGT+TGG | + | chr3_2:66370878-66370897 | None:intergenic | 60.0% | |
| ! | GCTCCGATTCCGGTGTTGGA+TGG | + | chr3_2:66370115-66370134 | None:intergenic | 60.0% |
| TCCCACGGTAGCACCTTTGC+CGG | - | chr3_2:66370226-66370245 | Msa0418600:CDS | 60.0% | |
| !! | ACCGGCAAAGGTGCTACCGT+GGG | + | chr3_2:66370230-66370249 | None:intergenic | 60.0% |
| !! | AACCGGCAAAGGTGCTACCG+TGG | + | chr3_2:66370231-66370250 | None:intergenic | 60.0% |
| TAGTGCGCGCAAACCGGCAA+AGG | + | chr3_2:66370242-66370261 | None:intergenic | 60.0% | |
| !! | TTTGCCGGTTTGCGCGCACT+AGG | - | chr3_2:66370241-66370260 | Msa0418600:CDS | 60.0% |
| !! | TCGTCGGGGCGGGTTGAATT+AGG | + | chr3_2:66370799-66370818 | None:intergenic | 60.0% |
| TGCGATCCAAGCTGCCAACG+TGG | - | chr3_2:66370861-66370880 | Msa0418600:intron | 60.0% | |
| GAGGATCCACGTTGGCAGCT+TGG | + | chr3_2:66370870-66370889 | None:intergenic | 60.0% | |
| CGTACGACGAGGATCCACGT+TGG | + | chr3_2:66370878-66370897 | None:intergenic | 60.0% | |
| GGCAGCTCCGATTCCGGTGT+TGG | + | chr3_2:66370119-66370138 | None:intergenic | 65.0% | |
| GACAGGGAATTCGTCGGGGC+GGG | + | chr3_2:66370809-66370828 | None:intergenic | 65.0% | |
| GGACAGGGAATTCGTCGGGG+CGG | + | chr3_2:66370810-66370829 | None:intergenic | 65.0% | |
| GGCAGCTCCGATTCCGGTGT+TGG | + | chr3_2:66370119-66370138 | None:intergenic | 65.0% | |
| GACAGGGAATTCGTCGGGGC+GGG | + | chr3_2:66370809-66370828 | None:intergenic | 65.0% | |
| GGACAGGGAATTCGTCGGGG+CGG | + | chr3_2:66370810-66370829 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 66369905 | 66372067 | 66369905 | ID=Msa0418600;Name=Msa0418600 |
| chr3_2 | mRNA | 66369905 | 66372067 | 66369905 | ID=Msa0418600-mRNA-1;Parent=Msa0418600;Name=Msa0418600-mRNA-1;_AED=0.04;_eAED=0.04;_QI=53|0.75|1|1|1|1|5|286|242 |
| chr3_2 | exon | 66369905 | 66370373 | 66369905 | ID=Msa0418600-mRNA-1:exon:15157;Parent=Msa0418600-mRNA-1 |
| chr3_2 | exon | 66371075 | 66371284 | 66371075 | ID=Msa0418600-mRNA-1:exon:15156;Parent=Msa0418600-mRNA-1 |
| chr3_2 | exon | 66371380 | 66371467 | 66371380 | ID=Msa0418600-mRNA-1:exon:15155;Parent=Msa0418600-mRNA-1 |
| chr3_2 | exon | 66371679 | 66371880 | 66371679 | ID=Msa0418600-mRNA-1:exon:15154;Parent=Msa0418600-mRNA-1 |
| chr3_2 | exon | 66371969 | 66372067 | 66371969 | ID=Msa0418600-mRNA-1:exon:15153;Parent=Msa0418600-mRNA-1 |
| chr3_2 | five_prime_UTR | 66372015 | 66372067 | 66372015 | ID=Msa0418600-mRNA-1:five_prime_utr;Parent=Msa0418600-mRNA-1 |
| chr3_2 | CDS | 66371969 | 66372014 | 66371969 | ID=Msa0418600-mRNA-1:cds;Parent=Msa0418600-mRNA-1 |
| chr3_2 | CDS | 66371679 | 66371880 | 66371679 | ID=Msa0418600-mRNA-1:cds;Parent=Msa0418600-mRNA-1 |
| chr3_2 | CDS | 66371380 | 66371467 | 66371380 | ID=Msa0418600-mRNA-1:cds;Parent=Msa0418600-mRNA-1 |
| chr3_2 | CDS | 66371075 | 66371284 | 66371075 | ID=Msa0418600-mRNA-1:cds;Parent=Msa0418600-mRNA-1 |
| chr3_2 | CDS | 66370191 | 66370373 | 66370191 | ID=Msa0418600-mRNA-1:cds;Parent=Msa0418600-mRNA-1 |
| chr3_2 | three_prime_UTR | 66369905 | 66370190 | 66369905 | ID=Msa0418600-mRNA-1:three_prime_utr;Parent=Msa0418600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
