AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0135430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0135430 MtrunA17_Chr1g0166011 98.925 186 2 0 1 186 1 186 1.97e-137 381
Msa0135430 MtrunA17_Chr1g0187961 73.077 182 35 3 1 182 11 178 3.04e-91 264
Msa0135430 MtrunA17_Chr1g0184801 65.625 192 58 3 1 184 12 203 9.97e-88 256
Msa0135430 MtrunA17_Chr7g0260621 62.371 194 62 4 1 184 11 203 8.75e-83 243
Msa0135430 MtrunA17_Chr6g0486121 42.795 229 85 6 1 183 15 243 2.22e-53 170
Msa0135430 MtrunA17_Chr1g0190711 43.590 234 75 8 1 183 15 242 9.37e-51 164
Msa0135430 MtrunA17_Chr1g0184791 45.259 232 68 9 1 183 13 234 1.00e-50 163
Msa0135430 MtrunA17_Chr2g0331411 48.705 193 66 5 17 182 128 314 1.07e-50 166
Msa0135430 MtrunA17_Chr1g0187921 44.144 222 81 7 1 183 8 225 3.98e-50 161
Msa0135430 MtrunA17_Chr8g0366881 39.114 271 77 7 1 183 67 337 1.27e-47 158
Msa0135430 MtrunA17_Chr5g0428141 54.667 150 44 4 58 183 187 336 1.42e-47 158
Msa0135430 MtrunA17_Chr5g0411501 37.226 274 81 8 1 183 51 324 1.73e-47 157
Msa0135430 MtrunA17_Chr7g0260641 40.870 230 88 6 1 183 11 239 3.13e-47 154
Msa0135430 MtrunA17_Chr8g0390281 40.310 258 78 10 1 182 24 281 1.26e-44 149
Msa0135430 MtrunA17_Chr4g0004181 45.304 181 78 5 3 183 8 167 3.96e-40 134
Msa0135430 MtrunA17_Chr2g0332141 55.914 93 32 2 91 174 8 100 6.85e-30 106
Msa0135430 MtrunA17_Chr8g0340731 30.620 258 106 7 1 185 10 267 2.47e-28 106
Msa0135430 MtrunA17_Chr2g0330951 30.800 250 108 7 2 186 13 262 1.53e-27 104
Msa0135430 MtrunA17_Chr1g0183251 33.146 178 58 4 66 183 81 257 4.21e-26 100
Msa0135430 MtrunA17_Chr4g0069561 38.095 126 77 1 55 179 59 184 2.11e-25 96.7
Msa0135430 MtrunA17_Chr7g0270851 41.748 103 56 2 83 184 62 161 1.44e-20 83.6
Msa0135430 MtrunA17_Chr1g0193861 41.667 108 59 3 71 175 64 170 2.44e-20 83.6
Msa0135430 MtrunA17_Chr3g0137601 31.496 127 67 3 68 179 89 210 2.77e-18 79.0
Msa0135430 MtrunA17_Chr1g0209181 37.313 134 69 4 53 175 39 168 4.25e-16 72.4
Msa0135430 MtrunA17_Chr4g0064131 31.148 122 63 3 68 176 93 206 8.56e-16 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0135430 AT1G04240.1 60.622 193 61 3 1 186 5 189 4.72e-80 236
Msa0135430 AT5G43700.1 61.905 189 53 4 1 185 11 184 1.83e-79 234
Msa0135430 AT1G04240.2 60.622 193 61 3 1 186 105 289 3.39e-79 238
Msa0135430 AT3G23030.1 60.109 183 51 3 1 182 9 170 1.33e-68 207
Msa0135430 AT3G23030.2 60.109 183 51 3 1 182 96 257 5.44e-68 208
Msa0135430 AT4G14560.1 60.894 179 49 3 1 179 7 164 5.09e-66 200
Msa0135430 AT3G04730.1 45.022 231 72 8 1 183 2 225 5.04e-55 174
Msa0135430 AT4G14550.2 44.796 221 80 6 1 183 1 217 1.46e-53 171
Msa0135430 AT4G14550.1 44.344 221 81 6 1 183 1 217 1.21e-52 168
Msa0135430 AT1G04250.1 45.327 214 84 7 1 183 7 218 3.25e-51 164
Msa0135430 AT4G29080.1 39.300 257 82 7 1 183 38 294 3.51e-50 164
Msa0135430 AT3G23050.1 44.298 228 80 7 1 183 6 231 6.71e-50 161
Msa0135430 AT2G22670.5 39.695 262 79 7 1 183 47 308 2.02e-48 160
Msa0135430 AT2G22670.2 39.695 262 79 7 1 183 47 308 2.02e-48 160
Msa0135430 AT2G22670.3 39.245 265 82 7 1 186 47 311 6.08e-48 159
Msa0135430 AT2G22670.1 39.245 265 82 7 1 186 47 311 6.08e-48 159
Msa0135430 AT2G22670.4 39.245 265 82 7 1 186 64 328 6.80e-48 159
Msa0135430 AT3G15540.1 46.486 185 92 4 3 183 8 189 1.07e-44 147
Msa0135430 AT5G65670.1 54.110 146 41 4 64 183 180 325 4.89e-44 149
Msa0135430 AT5G65670.2 54.110 146 41 4 64 183 180 325 4.98e-44 149
Msa0135430 AT1G52830.1 45.405 185 94 5 1 183 6 185 6.57e-42 139
Msa0135430 AT1G15580.1 46.111 180 70 7 3 181 10 163 2.66e-41 137
Msa0135430 AT4G14550.3 40.704 199 76 6 1 161 1 195 1.05e-39 134
Msa0135430 AT3G23050.2 40.580 207 76 7 1 162 6 210 1.56e-36 126
Msa0135430 AT2G33310.3 37.705 183 71 5 42 184 53 232 1.24e-30 112
Msa0135430 AT2G33310.1 37.705 183 71 5 42 184 53 232 1.24e-30 112
Msa0135430 AT3G16500.1 31.878 229 105 7 4 184 36 261 3.98e-30 111
Msa0135430 AT3G16500.2 31.718 227 106 7 4 184 36 259 8.56e-30 110
Msa0135430 AT2G33310.2 37.572 173 68 4 52 184 61 233 8.85e-30 110
Msa0135430 AT1G04550.2 39.080 174 62 5 53 183 52 224 2.89e-29 108
Msa0135430 AT4G28640.3 38.182 165 64 5 57 183 78 242 2.48e-27 103
Msa0135430 AT4G28640.1 38.037 163 63 5 57 181 78 240 5.68e-27 102
Msa0135430 AT4G28640.2 38.037 163 63 5 57 181 78 240 3.16e-26 102
Msa0135430 AT3G17600.1 37.838 148 71 5 36 175 20 154 1.27e-25 97.1
Msa0135430 AT5G25890.1 34.715 193 88 7 2 183 3 168 1.45e-25 97.4
Msa0135430 AT4G14550.4 38.710 155 65 5 1 129 1 151 7.04e-25 95.9
Msa0135430 AT1G51950.1 30.942 223 98 6 2 178 38 250 2.67e-24 96.3
Msa0135430 AT1G04100.1 37.952 166 52 4 69 183 95 260 3.18e-24 95.9
Msa0135430 AT3G23050.3 39.024 164 65 6 1 131 6 167 1.22e-22 89.7
Msa0135430 AT3G62100.1 47.191 89 47 0 87 175 80 168 1.36e-22 89.7
Msa0135430 AT2G46990.1 45.055 91 50 0 87 177 82 172 1.37e-22 89.7
Msa0135430 AT2G46990.2 47.368 76 40 0 87 162 82 157 1.99e-17 75.9
Msa0135430 AT3G62100.2 47.368 76 40 0 87 162 80 155 6.09e-17 74.3
Msa0135430 AT4G32280.2 40.698 86 46 2 90 175 118 198 4.57e-15 70.5
Msa0135430 AT4G32280.1 40.698 86 46 2 90 175 160 240 1.43e-14 70.1
Msa0135430 AT1G80390.1 35.115 131 55 4 2 125 15 122 2.08e-14 67.0
Msa0135430 AT1G15050.2 39.326 89 53 1 91 179 62 149 7.42e-12 60.8
Msa0135430 AT1G15050.1 39.326 89 53 1 91 179 94 181 1.37e-11 60.8
Msa0135430 AT2G46530.1 37.363 91 51 2 92 182 493 577 7.38e-11 60.5
Msa0135430 AT2G46530.2 37.363 91 51 2 92 182 406 490 7.43e-11 60.5
Msa0135430 AT2G46530.3 37.363 91 51 2 92 182 514 598 8.34e-11 60.5

Find 65 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCAATTGCTGGAGCTAA+TGG 0.222205 1_3:-67073939 Msa0135430:three_prime_UTR
TTCTGAAAGAGAGGGTTATA+AGG 0.253325 1_3:-67074804 Msa0135430:CDS
AGAATCTGTTTCAATTTCTA+AGG 0.274640 1_3:-67075607 Msa0135430:CDS
TCTAGAGCTTTGAGAAGTTC+TGG 0.300281 1_3:+67075163 None:intergenic
AAAGTCAATCTTTCAATTGC+TGG 0.315268 1_3:-67073948 Msa0135430:three_prime_UTR
GGCACAGAAGCTAGAGGTTT+GGG 0.319290 1_3:-67074041 Msa0135430:CDS
AGTCAATCTTTCTAAGATAA+GGG 0.338441 1_3:+67075206 None:intergenic
AAGATTGACTTGAGGATCTA+TGG 0.344542 1_3:-67075193 Msa0135430:CDS
TTTGAATGCCAATCTTGATT+TGG 0.346287 1_3:-67073914 Msa0135430:three_prime_UTR
GGCCACCAATTAGGTCTTAC+AGG 0.362405 1_3:-67075291 Msa0135430:CDS
TGGTTAATTTAGCATCTTGA+TGG 0.369559 1_3:-67073844 Msa0135430:three_prime_UTR
CAAGGCAACTGAGCTTAGAT+TGG 0.382816 1_3:-67075718 Msa0135430:CDS
TAGTAGGGTGGCCACCAATT+AGG 0.390633 1_3:-67075300 Msa0135430:CDS
CATAAGCAAGATGGAATTCA+AGG 0.408971 1_3:-67075736 Msa0135430:exon
AAGTCAATCTTTCTAAGATA+AGG 0.419964 1_3:+67075205 None:intergenic
AGGCACAGAAGCTAGAGGTT+TGG 0.423043 1_3:-67074042 Msa0135430:CDS
GAAGCTAGAGGTTTGGGTTG+TGG 0.426186 1_3:-67074035 Msa0135430:CDS
TTGATTAAAACTTACTTGGC+AGG 0.428702 1_3:+67075540 None:intergenic
GTCACCATCCTTGTCTTCAT+AGG 0.428945 1_3:+67074763 None:intergenic
TATTGCAGGGCAAAGATAGT+AGG 0.441299 1_3:-67075316 Msa0135430:intron
CCATCCTTGTCTTCATAGGT+TGG 0.460968 1_3:+67074767 None:intergenic
AAGGCAACTGAGCTTAGATT+GGG 0.478858 1_3:-67075717 Msa0135430:CDS
ACAGATTCTTCAGAAGTTTG+AGG 0.488351 1_3:+67075621 None:intergenic
TCTCCCTTCCAAATCAAGAT+TGG 0.500719 1_3:+67073906 None:intergenic
AATGCCAATCTTGATTTGGA+AGG 0.502897 1_3:-67073910 Msa0135430:three_prime_UTR
GGTTAATTTAGCATCTTGAT+GGG 0.508569 1_3:-67073843 Msa0135430:three_prime_UTR
GAGCTTAGATTGGGATTACC+AGG 0.513920 1_3:-67075708 Msa0135430:CDS
ATCTTGATTTGGAAGGGAGA+TGG 0.516791 1_3:-67073903 Msa0135430:three_prime_UTR
TTCCTGTAAGACCTAATTGG+TGG 0.520095 1_3:+67075289 None:intergenic
TCTGAAAGAGAGGGTTATAA+GGG 0.521294 1_3:-67074803 Msa0135430:CDS
ATTACCAGGGACAGATGAAA+AGG 0.535679 1_3:-67075694 Msa0135430:CDS
TAAAACTTACTTGGCAGGAG+GGG 0.540132 1_3:+67075545 None:intergenic
GATGGTGACTGGATGCTAGT+TGG 0.551132 1_3:-67074749 Msa0135430:CDS
ATGCCAATCTTGATTTGGAA+GGG 0.554257 1_3:-67073909 Msa0135430:three_prime_UTR
AATTAGAATTAGAAGAGTCA+TGG 0.559360 1_3:-67073727 Msa0135430:three_prime_UTR
AGGTGAGTATTCTGAAAGAG+AGG 0.559449 1_3:-67074813 Msa0135430:CDS
TGTAACAATTGTGTGAAAGT+AGG 0.559942 1_3:+67075868 None:intergenic
TGCTAGTTGGAGATGTTCCA+TGG 0.562736 1_3:-67074736 Msa0135430:CDS
GTCAATCTTTCTAAGATAAG+GGG 0.570265 1_3:+67075207 None:intergenic
ACCTATGGTCAATTTGAACA+TGG 0.570995 1_3:+67075138 None:intergenic
ATTGCAGGGCAAAGATAGTA+GGG 0.580888 1_3:-67075315 Msa0135430:intron
TTGCAAGATGCTGAAGTTGG+TGG 0.588995 1_3:-67075259 Msa0135430:CDS
GGATAGAGAACTTACTCCCA+TGG 0.589343 1_3:+67074719 None:intergenic
ATCTTAGAAAGATTGACTTG+AGG 0.591443 1_3:-67075201 Msa0135430:CDS
ACCATGTTCAAATTGACCAT+AGG 0.594986 1_3:-67075139 Msa0135430:intron
ACTTTGCAAGATGCTGAAGT+TGG 0.595544 1_3:-67075262 Msa0135430:CDS
ATTAAAACTTACTTGGCAGG+AGG 0.597037 1_3:+67075543 None:intergenic
TATGTGAAAGTGAGCATGGA+TGG 0.607005 1_3:-67075232 Msa0135430:CDS
ATGAAGACAAGGATGGTGAC+TGG 0.608145 1_3:-67074760 Msa0135430:CDS
TTAAAACTTACTTGGCAGGA+GGG 0.608705 1_3:+67075544 None:intergenic
ATGTTATTGAAAATGTTCAG+TGG 0.608738 1_3:+67073792 None:intergenic
TGCAAGATGCTGAAGTTGGT+GGG 0.610809 1_3:-67075258 Msa0135430:CDS
GGTGAGTATTCTGAAAGAGA+GGG 0.617046 1_3:-67074812 Msa0135430:CDS
GCTAGTTGGAGATGTTCCAT+GGG 0.627077 1_3:-67074735 Msa0135430:CDS
GATCTATGTGAAAGTGAGCA+TGG 0.629421 1_3:-67075236 Msa0135430:CDS
AAGGAGATGAAAACAATACA+TGG 0.630474 1_3:-67075675 Msa0135430:CDS
AAAAGACTAAGAATCATGAA+AGG 0.643848 1_3:-67074062 Msa0135430:CDS
TGCACCAACCTATGAAGACA+AGG 0.644295 1_3:-67074771 Msa0135430:CDS
TTCAAATGATGATCAGCATG+TGG 0.651916 1_3:-67075583 Msa0135430:CDS
AGCTTAGATTGGGATTACCA+GGG 0.671776 1_3:-67075707 Msa0135430:CDS
GTGTGAAAGTAGGAAATGCA+AGG 0.671895 1_3:+67075878 None:intergenic
CCAACCTATGAAGACAAGGA+TGG 0.673846 1_3:-67074767 Msa0135430:CDS
ATGAAAGGCACAGAAGCTAG+AGG 0.675055 1_3:-67074047 Msa0135430:CDS
ATTGACTTGAGGATCTATGG+AGG 0.689707 1_3:-67075190 Msa0135430:CDS
GCAGGGCAAAGATAGTAGGG+TGG 0.730499 1_3:-67075312 Msa0135430:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATTTTGTTTTTTGTTT+TGG - chr1_3:67074431-67074450 Msa0135430:intron 10.0%
!!! TAAAATTTTGTTTTTTGTTT+TGG - chr1_3:67074431-67074450 Msa0135430:intron 10.0%
!!! ATATTTTGTAATTGAATTAG+AGG - chr1_3:67073771-67073790 Msa0135430:three_prime_UTR 15.0%
!!! TATTTTGTAATTGAATTAGA+GGG - chr1_3:67073772-67073791 Msa0135430:three_prime_UTR 15.0%
!!! ATATTTTGTAATTGAATTAG+AGG - chr1_3:67073771-67073790 Msa0135430:three_prime_UTR 15.0%
!!! TATTTTGTAATTGAATTAGA+GGG - chr1_3:67073772-67073791 Msa0135430:three_prime_UTR 15.0%
!!! TATAGTCACTATAAAGTTTT+AGG + chr1_3:67073752-67073771 None:intergenic 20.0%
!! AAATCTTAATCATATGATTG+CGG - chr1_3:67074572-67074591 Msa0135430:intron 20.0%
!!! TATAGTCACTATAAAGTTTT+AGG + chr1_3:67073752-67073771 None:intergenic 20.0%
!! AAATCTTAATCATATGATTG+CGG - chr1_3:67074572-67074591 Msa0135430:intron 20.0%
!!! TTCTTTTGAGATGTTAAAAG+AGG + chr1_3:67073699-67073718 None:intergenic 25.0%
!! TCTTTTAACATCTCAAAAGA+AGG - chr1_3:67073698-67073717 Msa0135430:three_prime_UTR 25.0%
! AGAATCTGTTTCAATTTCTA+AGG - chr1_3:67073929-67073948 Msa0135430:three_prime_UTR 25.0%
! CTTCTTGATTAAAACTTACT+TGG + chr1_3:67074003-67074022 None:intergenic 25.0%
!!! CAAGTAAGTTTTAATCAAGA+AGG - chr1_3:67074001-67074020 Msa0135430:three_prime_UTR 25.0%
! AAACTTTCTCTTGTAAAAAG+TGG - chr1_3:67074028-67074047 Msa0135430:CDS 25.0%
!!! CAAGAATTTTTTTGTTTGTG+TGG - chr1_3:67074159-67074178 Msa0135430:intron 25.0%
! TAATTTGATGTTGATATTGC+AGG - chr1_3:67074206-67074225 Msa0135430:intron 25.0%
! AATTTGATGTTGATATTGCA+GGG - chr1_3:67074207-67074226 Msa0135430:intron 25.0%
!!! AGTCAATCTTTCTAAGATAA+GGG + chr1_3:67074333-67074352 None:intergenic 25.0%
!!! AAGTCAATCTTTCTAAGATA+AGG + chr1_3:67074334-67074353 None:intergenic 25.0%
!! TTTTATCTGTATCTTACCTA+TGG + chr1_3:67074416-67074435 None:intergenic 25.0%
! TCAAATAAGCTAATCAAAAC+AGG + chr1_3:67074941-67074960 None:intergenic 25.0%
!!! GCTTATTTGAGTTTATCTTT+TGG - chr1_3:67074951-67074970 Msa0135430:intron 25.0%
! GATAAACTGAAAACAACTTA+TGG + chr1_3:67075038-67075057 None:intergenic 25.0%
!! AATTTTTAATAGTCTGCGAT+CGG - chr1_3:67075337-67075356 Msa0135430:intron 25.0%
! TAACAGACAAACAATCAAAT+TGG + chr1_3:67075391-67075410 None:intergenic 25.0%
! AAAAGACTAAGAATCATGAA+AGG - chr1_3:67075474-67075493 Msa0135430:intron 25.0%
!! TTTTTCTTGCATATAGTCAT+AGG + chr1_3:67075551-67075570 None:intergenic 25.0%
!! ATATGCAAGAAAAAGAGTTT+TGG - chr1_3:67075557-67075576 Msa0135430:CDS 25.0%
!! AAACTTTGTCAACATGTTTT+TGG - chr1_3:67075672-67075691 Msa0135430:CDS 25.0%
! ATGTTATTGAAAATGTTCAG+TGG + chr1_3:67075747-67075766 None:intergenic 25.0%
! AATTAGAATTAGAAGAGTCA+TGG - chr1_3:67075809-67075828 Msa0135430:five_prime_UTR 25.0%
!!! TACGTAGTTATTTTTTTGAC+AGG - chr1_3:67075866-67075885 Msa0135430:five_prime_UTR 25.0%
!!! TTCTTTTGAGATGTTAAAAG+AGG + chr1_3:67073699-67073718 None:intergenic 25.0%
!! TCTTTTAACATCTCAAAAGA+AGG - chr1_3:67073698-67073717 Msa0135430:three_prime_UTR 25.0%
! AGAATCTGTTTCAATTTCTA+AGG - chr1_3:67073929-67073948 Msa0135430:three_prime_UTR 25.0%
! CTTCTTGATTAAAACTTACT+TGG + chr1_3:67074003-67074022 None:intergenic 25.0%
!!! CAAGTAAGTTTTAATCAAGA+AGG - chr1_3:67074001-67074020 Msa0135430:three_prime_UTR 25.0%
! AAACTTTCTCTTGTAAAAAG+TGG - chr1_3:67074028-67074047 Msa0135430:CDS 25.0%
!!! CAAGAATTTTTTTGTTTGTG+TGG - chr1_3:67074159-67074178 Msa0135430:intron 25.0%
! TAATTTGATGTTGATATTGC+AGG - chr1_3:67074206-67074225 Msa0135430:intron 25.0%
! AATTTGATGTTGATATTGCA+GGG - chr1_3:67074207-67074226 Msa0135430:intron 25.0%
!!! AGTCAATCTTTCTAAGATAA+GGG + chr1_3:67074333-67074352 None:intergenic 25.0%
!!! AAGTCAATCTTTCTAAGATA+AGG + chr1_3:67074334-67074353 None:intergenic 25.0%
!! TTTTATCTGTATCTTACCTA+TGG + chr1_3:67074416-67074435 None:intergenic 25.0%
! TCAAATAAGCTAATCAAAAC+AGG + chr1_3:67074941-67074960 None:intergenic 25.0%
!!! GCTTATTTGAGTTTATCTTT+TGG - chr1_3:67074951-67074970 Msa0135430:intron 25.0%
! GATAAACTGAAAACAACTTA+TGG + chr1_3:67075038-67075057 None:intergenic 25.0%
!! AATTTTTAATAGTCTGCGAT+CGG - chr1_3:67075337-67075356 Msa0135430:intron 25.0%
! TAACAGACAAACAATCAAAT+TGG + chr1_3:67075391-67075410 None:intergenic 25.0%
! AAAAGACTAAGAATCATGAA+AGG - chr1_3:67075474-67075493 Msa0135430:intron 25.0%
!! TTTTTCTTGCATATAGTCAT+AGG + chr1_3:67075551-67075570 None:intergenic 25.0%
!! ATATGCAAGAAAAAGAGTTT+TGG - chr1_3:67075557-67075576 Msa0135430:CDS 25.0%
!! AAACTTTGTCAACATGTTTT+TGG - chr1_3:67075672-67075691 Msa0135430:CDS 25.0%
! ATGTTATTGAAAATGTTCAG+TGG + chr1_3:67075747-67075766 None:intergenic 25.0%
! AATTAGAATTAGAAGAGTCA+TGG - chr1_3:67075809-67075828 Msa0135430:five_prime_UTR 25.0%
!!! TACGTAGTTATTTTTTTGAC+AGG - chr1_3:67075866-67075885 Msa0135430:five_prime_UTR 25.0%
! AATGCAAGGTTGTGTTTTAT+AGG + chr1_3:67073647-67073666 None:intergenic 30.0%
TGTAACAATTGTGTGAAAGT+AGG + chr1_3:67073671-67073690 None:intergenic 30.0%
AAGGAGATGAAAACAATACA+TGG - chr1_3:67073861-67073880 Msa0135430:three_prime_UTR 30.0%
TTGATTAAAACTTACTTGGC+AGG + chr1_3:67073999-67074018 None:intergenic 30.0%
! TTTTTCCTGTAAGACCTAAT+TGG + chr1_3:67074253-67074272 None:intergenic 30.0%
!! GTCAATCTTTCTAAGATAAG+GGG + chr1_3:67074332-67074351 None:intergenic 30.0%
!! ATCTTAGAAAGATTGACTTG+AGG - chr1_3:67074335-67074354 Msa0135430:intron 30.0%
!! AGTTATGTATAGACTAGTCT+TGG - chr1_3:67074627-67074646 Msa0135430:intron 30.0%
TTTATTGTGGTGAAACTAGT+TGG - chr1_3:67074651-67074670 Msa0135430:intron 30.0%
!!! GAAATTGTGCTTTGTTTTTC+AGG - chr1_3:67074703-67074722 Msa0135430:intron 30.0%
AGATAAAGCAAACACACAAA+TGG + chr1_3:67074841-67074860 None:intergenic 30.0%
CTGAAAACAACTTATGGTTA+TGG + chr1_3:67075032-67075051 None:intergenic 30.0%
! ATTATTCCTGGTGTCAATTT+GGG - chr1_3:67075227-67075246 Msa0135430:CDS 30.0%
!!! ATCCTCTAGAACTAATGTTT+TGG + chr1_3:67075368-67075387 None:intergenic 30.0%
!!! GAAAAAGAGTTTTGGTGTTT+AGG - chr1_3:67075565-67075584 Msa0135430:CDS 30.0%
AAAGTCAATCTTTCAATTGC+TGG - chr1_3:67075588-67075607 Msa0135430:CDS 30.0%
TTTGAATGCCAATCTTGATT+TGG - chr1_3:67075622-67075641 Msa0135430:CDS 30.0%
TGGTTAATTTAGCATCTTGA+TGG - chr1_3:67075692-67075711 Msa0135430:CDS 30.0%
GGTTAATTTAGCATCTTGAT+GGG - chr1_3:67075693-67075712 Msa0135430:CDS 30.0%
! AATGCAAGGTTGTGTTTTAT+AGG + chr1_3:67073647-67073666 None:intergenic 30.0%
TGTAACAATTGTGTGAAAGT+AGG + chr1_3:67073671-67073690 None:intergenic 30.0%
AAGGAGATGAAAACAATACA+TGG - chr1_3:67073861-67073880 Msa0135430:three_prime_UTR 30.0%
TTGATTAAAACTTACTTGGC+AGG + chr1_3:67073999-67074018 None:intergenic 30.0%
! TTTTTCCTGTAAGACCTAAT+TGG + chr1_3:67074253-67074272 None:intergenic 30.0%
!! GTCAATCTTTCTAAGATAAG+GGG + chr1_3:67074332-67074351 None:intergenic 30.0%
!! ATCTTAGAAAGATTGACTTG+AGG - chr1_3:67074335-67074354 Msa0135430:intron 30.0%
!! AGTTATGTATAGACTAGTCT+TGG - chr1_3:67074627-67074646 Msa0135430:intron 30.0%
TTTATTGTGGTGAAACTAGT+TGG - chr1_3:67074651-67074670 Msa0135430:intron 30.0%
!!! GAAATTGTGCTTTGTTTTTC+AGG - chr1_3:67074703-67074722 Msa0135430:intron 30.0%
AGATAAAGCAAACACACAAA+TGG + chr1_3:67074841-67074860 None:intergenic 30.0%
CTGAAAACAACTTATGGTTA+TGG + chr1_3:67075032-67075051 None:intergenic 30.0%
! ATTATTCCTGGTGTCAATTT+GGG - chr1_3:67075227-67075246 Msa0135430:CDS 30.0%
!!! ATCCTCTAGAACTAATGTTT+TGG + chr1_3:67075368-67075387 None:intergenic 30.0%
!!! GAAAAAGAGTTTTGGTGTTT+AGG - chr1_3:67075565-67075584 Msa0135430:CDS 30.0%
AAAGTCAATCTTTCAATTGC+TGG - chr1_3:67075588-67075607 Msa0135430:CDS 30.0%
TTTGAATGCCAATCTTGATT+TGG - chr1_3:67075622-67075641 Msa0135430:CDS 30.0%
TGGTTAATTTAGCATCTTGA+TGG - chr1_3:67075692-67075711 Msa0135430:CDS 30.0%
GGTTAATTTAGCATCTTGAT+GGG - chr1_3:67075693-67075712 Msa0135430:CDS 30.0%
CATAAGCAAGATGGAATTCA+AGG - chr1_3:67073800-67073819 Msa0135430:three_prime_UTR 35.0%
ACAGATTCTTCAGAAGTTTG+AGG + chr1_3:67073918-67073937 None:intergenic 35.0%
TTCAAATGATGATCAGCATG+TGG - chr1_3:67073953-67073972 Msa0135430:three_prime_UTR 35.0%
TTAAAACTTACTTGGCAGGA+GGG + chr1_3:67073995-67074014 None:intergenic 35.0%
ATTAAAACTTACTTGGCAGG+AGG + chr1_3:67073996-67074015 None:intergenic 35.0%
! GAATCTTTTGTCTCATCAAG+AGG + chr1_3:67074140-67074159 None:intergenic 35.0%
!! AAGATTGACTTGAGGATCTA+TGG - chr1_3:67074343-67074362 Msa0135430:intron 35.0%
ACCATGTTCAAATTGACCAT+AGG - chr1_3:67074397-67074416 Msa0135430:intron 35.0%
ACCTATGGTCAATTTGAACA+TGG + chr1_3:67074401-67074420 None:intergenic 35.0%
TTTAAATTGCAATCGCGTCT+AGG - chr1_3:67074461-67074480 Msa0135430:intron 35.0%
TTAAATTGCAATCGCGTCTA+GGG - chr1_3:67074462-67074481 Msa0135430:intron 35.0%
GACTGATGTAGTCTCAATTA+TGG - chr1_3:67074519-67074538 Msa0135430:intron 35.0%
!!! GACTAGTCTTGGTTTTATTG+TGG - chr1_3:67074638-67074657 Msa0135430:intron 35.0%
! TTCTGAAAGAGAGGGTTATA+AGG - chr1_3:67074732-67074751 Msa0135430:intron 35.0%
TCTGAAAGAGAGGGTTATAA+GGG - chr1_3:67074733-67074752 Msa0135430:intron 35.0%
! AGCCTCTTTGAGAAAGTTTA+GGG - chr1_3:67074988-67075007 Msa0135430:intron 35.0%
TTCCCTAAACTTTCTCAAAG+AGG + chr1_3:67074993-67075012 None:intergenic 35.0%
! GATTATTCCTGGTGTCAATT+TGG - chr1_3:67075226-67075245 Msa0135430:CDS 35.0%
!! CTCCAAAACATTAGTTCTAG+AGG - chr1_3:67075363-67075382 Msa0135430:intron 35.0%
!! CATGATTCTTAGTCTTTTGC+AGG + chr1_3:67075472-67075491 None:intergenic 35.0%
!! AATGCCAATCTTGATTTGGA+AGG - chr1_3:67075626-67075645 Msa0135430:CDS 35.0%
!! ATGCCAATCTTGATTTGGAA+GGG - chr1_3:67075627-67075646 Msa0135430:CDS 35.0%
CATAAGCAAGATGGAATTCA+AGG - chr1_3:67073800-67073819 Msa0135430:three_prime_UTR 35.0%
ACAGATTCTTCAGAAGTTTG+AGG + chr1_3:67073918-67073937 None:intergenic 35.0%
TTCAAATGATGATCAGCATG+TGG - chr1_3:67073953-67073972 Msa0135430:three_prime_UTR 35.0%
TTAAAACTTACTTGGCAGGA+GGG + chr1_3:67073995-67074014 None:intergenic 35.0%
ATTAAAACTTACTTGGCAGG+AGG + chr1_3:67073996-67074015 None:intergenic 35.0%
! GAATCTTTTGTCTCATCAAG+AGG + chr1_3:67074140-67074159 None:intergenic 35.0%
!! AAGATTGACTTGAGGATCTA+TGG - chr1_3:67074343-67074362 Msa0135430:intron 35.0%
ACCATGTTCAAATTGACCAT+AGG - chr1_3:67074397-67074416 Msa0135430:intron 35.0%
ACCTATGGTCAATTTGAACA+TGG + chr1_3:67074401-67074420 None:intergenic 35.0%
TTTAAATTGCAATCGCGTCT+AGG - chr1_3:67074461-67074480 Msa0135430:intron 35.0%
TTAAATTGCAATCGCGTCTA+GGG - chr1_3:67074462-67074481 Msa0135430:intron 35.0%
GACTGATGTAGTCTCAATTA+TGG - chr1_3:67074519-67074538 Msa0135430:intron 35.0%
!!! GACTAGTCTTGGTTTTATTG+TGG - chr1_3:67074638-67074657 Msa0135430:intron 35.0%
! TTCTGAAAGAGAGGGTTATA+AGG - chr1_3:67074732-67074751 Msa0135430:intron 35.0%
TCTGAAAGAGAGGGTTATAA+GGG - chr1_3:67074733-67074752 Msa0135430:intron 35.0%
! AGCCTCTTTGAGAAAGTTTA+GGG - chr1_3:67074988-67075007 Msa0135430:intron 35.0%
TTCCCTAAACTTTCTCAAAG+AGG + chr1_3:67074993-67075012 None:intergenic 35.0%
! GATTATTCCTGGTGTCAATT+TGG - chr1_3:67075226-67075245 Msa0135430:CDS 35.0%
!! CTCCAAAACATTAGTTCTAG+AGG - chr1_3:67075363-67075382 Msa0135430:intron 35.0%
!! CATGATTCTTAGTCTTTTGC+AGG + chr1_3:67075472-67075491 None:intergenic 35.0%
!! AATGCCAATCTTGATTTGGA+AGG - chr1_3:67075626-67075645 Msa0135430:CDS 35.0%
!! ATGCCAATCTTGATTTGGAA+GGG - chr1_3:67075627-67075646 Msa0135430:CDS 35.0%
GTGTGAAAGTAGGAAATGCA+AGG + chr1_3:67073661-67073680 None:intergenic 40.0%
! AGGGTTTTGCATAAGCAAGA+TGG - chr1_3:67073791-67073810 Msa0135430:three_prime_UTR 40.0%
AAGGCAACTGAGCTTAGATT+GGG - chr1_3:67073819-67073838 Msa0135430:three_prime_UTR 40.0%
AGCTTAGATTGGGATTACCA+GGG - chr1_3:67073829-67073848 Msa0135430:three_prime_UTR 40.0%
ATTACCAGGGACAGATGAAA+AGG - chr1_3:67073842-67073861 Msa0135430:three_prime_UTR 40.0%
TAAAACTTACTTGGCAGGAG+GGG + chr1_3:67073994-67074013 None:intergenic 40.0%
TACTACCATGCAGCTGTATA+GGG + chr1_3:67074055-67074074 None:intergenic 40.0%
TATACAGCTGCATGGTAGTA+CGG - chr1_3:67074055-67074074 Msa0135430:CDS 40.0%
TATTGCAGGGCAAAGATAGT+AGG - chr1_3:67074220-67074239 Msa0135430:intron 40.0%
ATTGCAGGGCAAAGATAGTA+GGG - chr1_3:67074221-67074240 Msa0135430:intron 40.0%
TTCCTGTAAGACCTAATTGG+TGG + chr1_3:67074250-67074269 None:intergenic 40.0%
ACTTTGCAAGATGCTGAAGT+TGG - chr1_3:67074274-67074293 Msa0135430:intron 40.0%
GATCTATGTGAAAGTGAGCA+TGG - chr1_3:67074300-67074319 Msa0135430:intron 40.0%
TATGTGAAAGTGAGCATGGA+TGG - chr1_3:67074304-67074323 Msa0135430:intron 40.0%
!! ATTGACTTGAGGATCTATGG+AGG - chr1_3:67074346-67074365 Msa0135430:intron 40.0%
!! TCTAGAGCTTTGAGAAGTTC+TGG + chr1_3:67074376-67074395 None:intergenic 40.0%
! AGGTGAGTATTCTGAAAGAG+AGG - chr1_3:67074723-67074742 Msa0135430:intron 40.0%
! GGTGAGTATTCTGAAAGAGA+GGG - chr1_3:67074724-67074743 Msa0135430:intron 40.0%
!! GAACTTAGATCCTCTGAAGT+TGG - chr1_3:67074885-67074904 Msa0135430:intron 40.0%
!! ATCCTCTGAAGTTGGCTTTA+TGG - chr1_3:67074893-67074912 Msa0135430:intron 40.0%
TACCATAAAGCCAACTTCAG+AGG + chr1_3:67074898-67074917 None:intergenic 40.0%
GTAGCAGATAGTTCGATTGT+TGG - chr1_3:67074915-67074934 Msa0135430:intron 40.0%
! GAGCCTCTTTGAGAAAGTTT+AGG - chr1_3:67074987-67075006 Msa0135430:intron 40.0%
!! GTCATTTTCATCGACCATCA+TGG + chr1_3:67075073-67075092 None:intergenic 40.0%
TAATCGAACCTAAGACCTTG+AGG + chr1_3:67075211-67075230 None:intergenic 40.0%
GTCTTAGGTTCGATTATTCC+TGG - chr1_3:67075215-67075234 Msa0135430:CDS 40.0%
CTTTCAATTGCTGGAGCTAA+TGG - chr1_3:67075597-67075616 Msa0135430:CDS 40.0%
TCTCCCTTCCAAATCAAGAT+TGG + chr1_3:67075633-67075652 None:intergenic 40.0%
!! ATCTTGATTTGGAAGGGAGA+TGG - chr1_3:67075633-67075652 Msa0135430:CDS 40.0%
GTGTGAAAGTAGGAAATGCA+AGG + chr1_3:67073661-67073680 None:intergenic 40.0%
! AGGGTTTTGCATAAGCAAGA+TGG - chr1_3:67073791-67073810 Msa0135430:three_prime_UTR 40.0%
AAGGCAACTGAGCTTAGATT+GGG - chr1_3:67073819-67073838 Msa0135430:three_prime_UTR 40.0%
AGCTTAGATTGGGATTACCA+GGG - chr1_3:67073829-67073848 Msa0135430:three_prime_UTR 40.0%
ATTACCAGGGACAGATGAAA+AGG - chr1_3:67073842-67073861 Msa0135430:three_prime_UTR 40.0%
TAAAACTTACTTGGCAGGAG+GGG + chr1_3:67073994-67074013 None:intergenic 40.0%
TACTACCATGCAGCTGTATA+GGG + chr1_3:67074055-67074074 None:intergenic 40.0%
TATACAGCTGCATGGTAGTA+CGG - chr1_3:67074055-67074074 Msa0135430:CDS 40.0%
TATTGCAGGGCAAAGATAGT+AGG - chr1_3:67074220-67074239 Msa0135430:intron 40.0%
ATTGCAGGGCAAAGATAGTA+GGG - chr1_3:67074221-67074240 Msa0135430:intron 40.0%
TTCCTGTAAGACCTAATTGG+TGG + chr1_3:67074250-67074269 None:intergenic 40.0%
ACTTTGCAAGATGCTGAAGT+TGG - chr1_3:67074274-67074293 Msa0135430:intron 40.0%
GATCTATGTGAAAGTGAGCA+TGG - chr1_3:67074300-67074319 Msa0135430:intron 40.0%
TATGTGAAAGTGAGCATGGA+TGG - chr1_3:67074304-67074323 Msa0135430:intron 40.0%
!! ATTGACTTGAGGATCTATGG+AGG - chr1_3:67074346-67074365 Msa0135430:intron 40.0%
!! TCTAGAGCTTTGAGAAGTTC+TGG + chr1_3:67074376-67074395 None:intergenic 40.0%
! AGGTGAGTATTCTGAAAGAG+AGG - chr1_3:67074723-67074742 Msa0135430:intron 40.0%
! GGTGAGTATTCTGAAAGAGA+GGG - chr1_3:67074724-67074743 Msa0135430:intron 40.0%
!! GAACTTAGATCCTCTGAAGT+TGG - chr1_3:67074885-67074904 Msa0135430:intron 40.0%
!! ATCCTCTGAAGTTGGCTTTA+TGG - chr1_3:67074893-67074912 Msa0135430:intron 40.0%
TACCATAAAGCCAACTTCAG+AGG + chr1_3:67074898-67074917 None:intergenic 40.0%
GTAGCAGATAGTTCGATTGT+TGG - chr1_3:67074915-67074934 Msa0135430:intron 40.0%
! GAGCCTCTTTGAGAAAGTTT+AGG - chr1_3:67074987-67075006 Msa0135430:intron 40.0%
!! GTCATTTTCATCGACCATCA+TGG + chr1_3:67075073-67075092 None:intergenic 40.0%
TAATCGAACCTAAGACCTTG+AGG + chr1_3:67075211-67075230 None:intergenic 40.0%
GTCTTAGGTTCGATTATTCC+TGG - chr1_3:67075215-67075234 Msa0135430:CDS 40.0%
CTTTCAATTGCTGGAGCTAA+TGG - chr1_3:67075597-67075616 Msa0135430:CDS 40.0%
TCTCCCTTCCAAATCAAGAT+TGG + chr1_3:67075633-67075652 None:intergenic 40.0%
!! ATCTTGATTTGGAAGGGAGA+TGG - chr1_3:67075633-67075652 Msa0135430:CDS 40.0%
CAAGGCAACTGAGCTTAGAT+TGG - chr1_3:67073818-67073837 Msa0135430:three_prime_UTR 45.0%
GAGCTTAGATTGGGATTACC+AGG - chr1_3:67073828-67073847 Msa0135430:three_prime_UTR 45.0%
! ATCTCCTTTTCATCTGTCCC+TGG + chr1_3:67073849-67073868 None:intergenic 45.0%
GTACTACCATGCAGCTGTAT+AGG + chr1_3:67074056-67074075 None:intergenic 45.0%
ATACGTACTGCAACCGTTCA+GGG - chr1_3:67074113-67074132 Msa0135430:intron 45.0%
TTGCAAGATGCTGAAGTTGG+TGG - chr1_3:67074277-67074296 Msa0135430:intron 45.0%
! TGCAAGATGCTGAAGTTGGT+GGG - chr1_3:67074278-67074297 Msa0135430:intron 45.0%
TGCACCAACCTATGAAGACA+AGG - chr1_3:67074765-67074784 Msa0135430:CDS 45.0%
CCATCCTTGTCTTCATAGGT+TGG + chr1_3:67074772-67074791 None:intergenic 45.0%
CCAACCTATGAAGACAAGGA+TGG - chr1_3:67074769-67074788 Msa0135430:CDS 45.0%
GTCACCATCCTTGTCTTCAT+AGG + chr1_3:67074776-67074795 None:intergenic 45.0%
ATGAAGACAAGGATGGTGAC+TGG - chr1_3:67074776-67074795 Msa0135430:CDS 45.0%
TGCTAGTTGGAGATGTTCCA+TGG - chr1_3:67074800-67074819 Msa0135430:CDS 45.0%
GCTAGTTGGAGATGTTCCAT+GGG - chr1_3:67074801-67074820 Msa0135430:CDS 45.0%
GGATAGAGAACTTACTCCCA+TGG + chr1_3:67074820-67074839 None:intergenic 45.0%
CATCGACCATCATGGAAAAC+TGG + chr1_3:67075065-67075084 None:intergenic 45.0%
AGCACTTACTCTAACCCACT+TGG - chr1_3:67075142-67075161 Msa0135430:CDS 45.0%
GCACTTACTCTAACCCACTT+GGG - chr1_3:67075143-67075162 Msa0135430:CDS 45.0%
TTACTCTAACCCACTTGGGT+TGG - chr1_3:67075147-67075166 Msa0135430:CDS 45.0%
!! TTGGGTTGGTCTGATGGTAT+TGG - chr1_3:67075161-67075180 Msa0135430:CDS 45.0%
!! TTGGTCTGATGGTATTGGCT+TGG - chr1_3:67075166-67075185 Msa0135430:CDS 45.0%
!! TGGTCTGATGGTATTGGCTT+GGG - chr1_3:67075167-67075186 Msa0135430:CDS 45.0%
! ATTCCTGGTGTCAATTTGGG+TGG - chr1_3:67075230-67075249 Msa0135430:CDS 45.0%
! TTCCTGGTGTCAATTTGGGT+GGG - chr1_3:67075231-67075250 Msa0135430:CDS 45.0%
! ATGAAAGGCACAGAAGCTAG+AGG - chr1_3:67075489-67075508 Msa0135430:intron 45.0%
CAAGGCAACTGAGCTTAGAT+TGG - chr1_3:67073818-67073837 Msa0135430:three_prime_UTR 45.0%
GAGCTTAGATTGGGATTACC+AGG - chr1_3:67073828-67073847 Msa0135430:three_prime_UTR 45.0%
! ATCTCCTTTTCATCTGTCCC+TGG + chr1_3:67073849-67073868 None:intergenic 45.0%
GTACTACCATGCAGCTGTAT+AGG + chr1_3:67074056-67074075 None:intergenic 45.0%
ATACGTACTGCAACCGTTCA+GGG - chr1_3:67074113-67074132 Msa0135430:intron 45.0%
TTGCAAGATGCTGAAGTTGG+TGG - chr1_3:67074277-67074296 Msa0135430:intron 45.0%
! TGCAAGATGCTGAAGTTGGT+GGG - chr1_3:67074278-67074297 Msa0135430:intron 45.0%
TGCACCAACCTATGAAGACA+AGG - chr1_3:67074765-67074784 Msa0135430:CDS 45.0%
CCATCCTTGTCTTCATAGGT+TGG + chr1_3:67074772-67074791 None:intergenic 45.0%
CCAACCTATGAAGACAAGGA+TGG - chr1_3:67074769-67074788 Msa0135430:CDS 45.0%
GTCACCATCCTTGTCTTCAT+AGG + chr1_3:67074776-67074795 None:intergenic 45.0%
ATGAAGACAAGGATGGTGAC+TGG - chr1_3:67074776-67074795 Msa0135430:CDS 45.0%
TGCTAGTTGGAGATGTTCCA+TGG - chr1_3:67074800-67074819 Msa0135430:CDS 45.0%
GCTAGTTGGAGATGTTCCAT+GGG - chr1_3:67074801-67074820 Msa0135430:CDS 45.0%
GGATAGAGAACTTACTCCCA+TGG + chr1_3:67074820-67074839 None:intergenic 45.0%
CATCGACCATCATGGAAAAC+TGG + chr1_3:67075065-67075084 None:intergenic 45.0%
AGCACTTACTCTAACCCACT+TGG - chr1_3:67075142-67075161 Msa0135430:CDS 45.0%
GCACTTACTCTAACCCACTT+GGG - chr1_3:67075143-67075162 Msa0135430:CDS 45.0%
TTACTCTAACCCACTTGGGT+TGG - chr1_3:67075147-67075166 Msa0135430:CDS 45.0%
!! TTGGGTTGGTCTGATGGTAT+TGG - chr1_3:67075161-67075180 Msa0135430:CDS 45.0%
!! TTGGTCTGATGGTATTGGCT+TGG - chr1_3:67075166-67075185 Msa0135430:CDS 45.0%
!! TGGTCTGATGGTATTGGCTT+GGG - chr1_3:67075167-67075186 Msa0135430:CDS 45.0%
! ATTCCTGGTGTCAATTTGGG+TGG - chr1_3:67075230-67075249 Msa0135430:CDS 45.0%
! TTCCTGGTGTCAATTTGGGT+GGG - chr1_3:67075231-67075250 Msa0135430:CDS 45.0%
! ATGAAAGGCACAGAAGCTAG+AGG - chr1_3:67075489-67075508 Msa0135430:intron 45.0%
CTGAACGGTTGCAGTACGTA+TGG + chr1_3:67074114-67074133 None:intergenic 50.0%
CATACGTACTGCAACCGTTC+AGG - chr1_3:67074112-67074131 Msa0135430:intron 50.0%
CTCATCAAGAGGACCCTGAA+CGG + chr1_3:67074129-67074148 None:intergenic 50.0%
TAGTAGGGTGGCCACCAATT+AGG - chr1_3:67074236-67074255 Msa0135430:intron 50.0%
GGCCACCAATTAGGTCTTAC+AGG - chr1_3:67074245-67074264 Msa0135430:intron 50.0%
GATGGTGACTGGATGCTAGT+TGG - chr1_3:67074787-67074806 Msa0135430:CDS 50.0%
! TCCTCGCCAGTTTTCCATGA+TGG - chr1_3:67075056-67075075 Msa0135430:intron 50.0%
ACCATCATGGAAAACTGGCG+AGG + chr1_3:67075060-67075079 None:intergenic 50.0%
ACCATCAGACCAACCCAAGT+GGG + chr1_3:67075159-67075178 None:intergenic 50.0%
TACCATCAGACCAACCCAAG+TGG + chr1_3:67075160-67075179 None:intergenic 50.0%
!! GGTCTGATGGTATTGGCTTG+GGG - chr1_3:67075168-67075187 Msa0135430:CDS 50.0%
!! ATGGTATTGGCTTGGGGTCT+GGG - chr1_3:67075174-67075193 Msa0135430:CDS 50.0%
TCGAACCTAAGACCTTGAGG+AGG + chr1_3:67075208-67075227 None:intergenic 50.0%
AGGCACAGAAGCTAGAGGTT+TGG - chr1_3:67075494-67075513 Msa0135430:intron 50.0%
GGCACAGAAGCTAGAGGTTT+GGG - chr1_3:67075495-67075514 Msa0135430:intron 50.0%
!! GAAGCTAGAGGTTTGGGTTG+TGG - chr1_3:67075501-67075520 Msa0135430:intron 50.0%
CTGAACGGTTGCAGTACGTA+TGG + chr1_3:67074114-67074133 None:intergenic 50.0%
CATACGTACTGCAACCGTTC+AGG - chr1_3:67074112-67074131 Msa0135430:intron 50.0%
CTCATCAAGAGGACCCTGAA+CGG + chr1_3:67074129-67074148 None:intergenic 50.0%
TAGTAGGGTGGCCACCAATT+AGG - chr1_3:67074236-67074255 Msa0135430:intron 50.0%
GGCCACCAATTAGGTCTTAC+AGG - chr1_3:67074245-67074264 Msa0135430:intron 50.0%
GATGGTGACTGGATGCTAGT+TGG - chr1_3:67074787-67074806 Msa0135430:CDS 50.0%
! TCCTCGCCAGTTTTCCATGA+TGG - chr1_3:67075056-67075075 Msa0135430:intron 50.0%
ACCATCATGGAAAACTGGCG+AGG + chr1_3:67075060-67075079 None:intergenic 50.0%
ACCATCAGACCAACCCAAGT+GGG + chr1_3:67075159-67075178 None:intergenic 50.0%
TACCATCAGACCAACCCAAG+TGG + chr1_3:67075160-67075179 None:intergenic 50.0%
!! GGTCTGATGGTATTGGCTTG+GGG - chr1_3:67075168-67075187 Msa0135430:CDS 50.0%
!! ATGGTATTGGCTTGGGGTCT+GGG - chr1_3:67075174-67075193 Msa0135430:CDS 50.0%
TCGAACCTAAGACCTTGAGG+AGG + chr1_3:67075208-67075227 None:intergenic 50.0%
AGGCACAGAAGCTAGAGGTT+TGG - chr1_3:67075494-67075513 Msa0135430:intron 50.0%
GGCACAGAAGCTAGAGGTTT+GGG - chr1_3:67075495-67075514 Msa0135430:intron 50.0%
!! GAAGCTAGAGGTTTGGGTTG+TGG - chr1_3:67075501-67075520 Msa0135430:intron 50.0%
GTGGACCCTATACAGCTGCA+TGG - chr1_3:67074047-67074066 Msa0135430:CDS 55.0%
GCAGGGCAAAGATAGTAGGG+TGG - chr1_3:67074224-67074243 Msa0135430:intron 55.0%
!! ACCCACTTGGGTTGGTCTGA+TGG - chr1_3:67075155-67075174 Msa0135430:CDS 55.0%
!! GATGGTATTGGCTTGGGGTC+TGG - chr1_3:67075173-67075192 Msa0135430:CDS 55.0%
GTGCTCCTCCTCAAGGTCTT+AGG - chr1_3:67075200-67075219 Msa0135430:CDS 55.0%
AGCCCACCCAAATTGACACC+AGG + chr1_3:67075236-67075255 None:intergenic 55.0%
GTGGACCCTATACAGCTGCA+TGG - chr1_3:67074047-67074066 Msa0135430:CDS 55.0%
GCAGGGCAAAGATAGTAGGG+TGG - chr1_3:67074224-67074243 Msa0135430:intron 55.0%
!! ACCCACTTGGGTTGGTCTGA+TGG - chr1_3:67075155-67075174 Msa0135430:CDS 55.0%
!! GATGGTATTGGCTTGGGGTC+TGG - chr1_3:67075173-67075192 Msa0135430:CDS 55.0%
GTGCTCCTCCTCAAGGTCTT+AGG - chr1_3:67075200-67075219 Msa0135430:CDS 55.0%
AGCCCACCCAAATTGACACC+AGG + chr1_3:67075236-67075255 None:intergenic 55.0%
! TGGGAGTGTGCTCCTCCTCA+AGG - chr1_3:67075193-67075212 Msa0135430:CDS 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG - chr1_3:67075193-67075212 Msa0135430:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 67073637 67075921 67073637 ID=Msa0135430;Name=Msa0135430
chr1_3 mRNA 67073637 67075921 67073637 ID=Msa0135430-mRNA-1;Parent=Msa0135430;Name=Msa0135430-mRNA-1;_AED=0.11;_eAED=0.11;_QI=173|1|1|1|1|1|4|391|186
chr1_3 exon 67073637 67074103 67073637 ID=Msa0135430-mRNA-1:exon:22965;Parent=Msa0135430-mRNA-1
chr1_3 exon 67074734 67074833 67074734 ID=Msa0135430-mRNA-1:exon:22964;Parent=Msa0135430-mRNA-1
chr1_3 exon 67075140 67075330 67075140 ID=Msa0135430-mRNA-1:exon:22963;Parent=Msa0135430-mRNA-1
chr1_3 exon 67075555 67075921 67075555 ID=Msa0135430-mRNA-1:exon:22962;Parent=Msa0135430-mRNA-1
chr1_3 five_prime_UTR 67075749 67075921 67075749 ID=Msa0135430-mRNA-1:five_prime_utr;Parent=Msa0135430-mRNA-1
chr1_3 CDS 67075555 67075748 67075555 ID=Msa0135430-mRNA-1:cds;Parent=Msa0135430-mRNA-1
chr1_3 CDS 67075140 67075330 67075140 ID=Msa0135430-mRNA-1:cds;Parent=Msa0135430-mRNA-1
chr1_3 CDS 67074734 67074833 67074734 ID=Msa0135430-mRNA-1:cds;Parent=Msa0135430-mRNA-1
chr1_3 CDS 67074028 67074103 67074028 ID=Msa0135430-mRNA-1:cds;Parent=Msa0135430-mRNA-1
chr1_3 three_prime_UTR 67073637 67074027 67073637 ID=Msa0135430-mRNA-1:three_prime_utr;Parent=Msa0135430-mRNA-1
Gene Sequence

>Msa0135430

ATGGAATTCAAGGCAACTGAGCTTAGATTGGGATTACCAGGGACAGATGAAAAGGAGATGAAAACAATACATGGTAGTGTTGTTAAGAATAACAAAAGACAATTACCTCAAACTTCTGAAGAATCTGTTTCAATTTCTAAGGTTTCAAATGATGATCAGCATGTGGAGAGTTCTTCTGCTGCCCCTCCTGCCAAGGCAAAGATAGTAGGGTGGCCACCAATTAGGTCTTACAGGAAAAACACTTTGCAAGATGCTGAAGTTGGTGGGATCTATGTGAAAGTGAGCATGGATGGTGCCCCTTATCTTAGAAAGATTGACTTGAGGATCTATGGAGGCTATCCAGAACTTCTCAAAGCTCTAGAAACCATGTTCAAATTGACCATAGGTGAGTATTCTGAAAGAGAGGGTTATAAGGGATCTGAATATGCACCAACCTATGAAGACAAGGATGGTGACTGGATGCTAGTTGGAGATGTTCCATGGGACATGTTTGTGACTTCCTGCAAAAGACTAAGAATCATGAAAGGCACAGAAGCTAGAGGTTTGGGTTGTGGTGTATGA
Protein sequence

>Msa0135430

MEFKATELRLGLPGTDEKEMKTIHGSVVKNNKRQLPQTSEESVSISKVSNDDQHVESSSAAPPAKAKIVGWPPIRSYRKNTLQDAEVGGIYVKVSMDGAPYLRKIDLRIYGGYPELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEARGLGCGV*