AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1087970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1087970 MtrunA17_Chr1g0166011 98.925 186 2 0 1 186 1 186 1.97e-137 381
Msa1087970 MtrunA17_Chr1g0187961 73.077 182 35 3 1 182 11 178 3.04e-91 264
Msa1087970 MtrunA17_Chr1g0184801 65.625 192 58 3 1 184 12 203 9.97e-88 256
Msa1087970 MtrunA17_Chr7g0260621 62.371 194 62 4 1 184 11 203 8.75e-83 243
Msa1087970 MtrunA17_Chr6g0486121 42.795 229 85 6 1 183 15 243 2.22e-53 170
Msa1087970 MtrunA17_Chr1g0190711 43.590 234 75 8 1 183 15 242 9.37e-51 164
Msa1087970 MtrunA17_Chr1g0184791 45.259 232 68 9 1 183 13 234 1.00e-50 163
Msa1087970 MtrunA17_Chr2g0331411 48.705 193 66 5 17 182 128 314 1.07e-50 166
Msa1087970 MtrunA17_Chr1g0187921 44.144 222 81 7 1 183 8 225 3.98e-50 161
Msa1087970 MtrunA17_Chr8g0366881 39.114 271 77 7 1 183 67 337 1.27e-47 158
Msa1087970 MtrunA17_Chr5g0428141 54.667 150 44 4 58 183 187 336 1.42e-47 158
Msa1087970 MtrunA17_Chr5g0411501 37.226 274 81 8 1 183 51 324 1.73e-47 157
Msa1087970 MtrunA17_Chr7g0260641 40.870 230 88 6 1 183 11 239 3.13e-47 154
Msa1087970 MtrunA17_Chr8g0390281 40.310 258 78 10 1 182 24 281 1.26e-44 149
Msa1087970 MtrunA17_Chr4g0004181 45.304 181 78 5 3 183 8 167 3.96e-40 134
Msa1087970 MtrunA17_Chr2g0332141 55.914 93 32 2 91 174 8 100 6.85e-30 106
Msa1087970 MtrunA17_Chr8g0340731 30.620 258 106 7 1 185 10 267 2.47e-28 106
Msa1087970 MtrunA17_Chr2g0330951 30.800 250 108 7 2 186 13 262 1.53e-27 104
Msa1087970 MtrunA17_Chr1g0183251 33.146 178 58 4 66 183 81 257 4.21e-26 100
Msa1087970 MtrunA17_Chr4g0069561 38.095 126 77 1 55 179 59 184 2.11e-25 96.7
Msa1087970 MtrunA17_Chr7g0270851 41.748 103 56 2 83 184 62 161 1.44e-20 83.6
Msa1087970 MtrunA17_Chr1g0193861 41.667 108 59 3 71 175 64 170 2.44e-20 83.6
Msa1087970 MtrunA17_Chr3g0137601 31.496 127 67 3 68 179 89 210 2.77e-18 79.0
Msa1087970 MtrunA17_Chr1g0209181 37.313 134 69 4 53 175 39 168 4.25e-16 72.4
Msa1087970 MtrunA17_Chr4g0064131 31.148 122 63 3 68 176 93 206 8.56e-16 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1087970 AT1G04240.1 60.622 193 61 3 1 186 5 189 4.72e-80 236
Msa1087970 AT5G43700.1 61.905 189 53 4 1 185 11 184 1.83e-79 234
Msa1087970 AT1G04240.2 60.622 193 61 3 1 186 105 289 3.39e-79 238
Msa1087970 AT3G23030.1 60.109 183 51 3 1 182 9 170 1.33e-68 207
Msa1087970 AT3G23030.2 60.109 183 51 3 1 182 96 257 5.44e-68 208
Msa1087970 AT4G14560.1 60.894 179 49 3 1 179 7 164 5.09e-66 200
Msa1087970 AT3G04730.1 45.022 231 72 8 1 183 2 225 5.04e-55 174
Msa1087970 AT4G14550.2 44.796 221 80 6 1 183 1 217 1.46e-53 171
Msa1087970 AT4G14550.1 44.344 221 81 6 1 183 1 217 1.21e-52 168
Msa1087970 AT1G04250.1 45.327 214 84 7 1 183 7 218 3.25e-51 164
Msa1087970 AT4G29080.1 39.300 257 82 7 1 183 38 294 3.51e-50 164
Msa1087970 AT3G23050.1 44.298 228 80 7 1 183 6 231 6.71e-50 161
Msa1087970 AT2G22670.5 39.695 262 79 7 1 183 47 308 2.02e-48 160
Msa1087970 AT2G22670.2 39.695 262 79 7 1 183 47 308 2.02e-48 160
Msa1087970 AT2G22670.3 39.245 265 82 7 1 186 47 311 6.08e-48 159
Msa1087970 AT2G22670.1 39.245 265 82 7 1 186 47 311 6.08e-48 159
Msa1087970 AT2G22670.4 39.245 265 82 7 1 186 64 328 6.80e-48 159
Msa1087970 AT3G15540.1 46.486 185 92 4 3 183 8 189 1.07e-44 147
Msa1087970 AT5G65670.1 54.110 146 41 4 64 183 180 325 4.89e-44 149
Msa1087970 AT5G65670.2 54.110 146 41 4 64 183 180 325 4.98e-44 149
Msa1087970 AT1G52830.1 45.405 185 94 5 1 183 6 185 6.57e-42 139
Msa1087970 AT1G15580.1 46.111 180 70 7 3 181 10 163 2.66e-41 137
Msa1087970 AT4G14550.3 40.704 199 76 6 1 161 1 195 1.05e-39 134
Msa1087970 AT3G23050.2 40.580 207 76 7 1 162 6 210 1.56e-36 126
Msa1087970 AT2G33310.3 37.705 183 71 5 42 184 53 232 1.24e-30 112
Msa1087970 AT2G33310.1 37.705 183 71 5 42 184 53 232 1.24e-30 112
Msa1087970 AT3G16500.1 31.878 229 105 7 4 184 36 261 3.98e-30 111
Msa1087970 AT3G16500.2 31.718 227 106 7 4 184 36 259 8.56e-30 110
Msa1087970 AT2G33310.2 37.572 173 68 4 52 184 61 233 8.85e-30 110
Msa1087970 AT1G04550.2 39.080 174 62 5 53 183 52 224 2.89e-29 108
Msa1087970 AT4G28640.3 38.182 165 64 5 57 183 78 242 2.48e-27 103
Msa1087970 AT4G28640.1 38.037 163 63 5 57 181 78 240 5.68e-27 102
Msa1087970 AT4G28640.2 38.037 163 63 5 57 181 78 240 3.16e-26 102
Msa1087970 AT3G17600.1 37.838 148 71 5 36 175 20 154 1.27e-25 97.1
Msa1087970 AT5G25890.1 34.715 193 88 7 2 183 3 168 1.45e-25 97.4
Msa1087970 AT4G14550.4 38.710 155 65 5 1 129 1 151 7.04e-25 95.9
Msa1087970 AT1G51950.1 30.942 223 98 6 2 178 38 250 2.67e-24 96.3
Msa1087970 AT1G04100.1 37.952 166 52 4 69 183 95 260 3.18e-24 95.9
Msa1087970 AT3G23050.3 39.024 164 65 6 1 131 6 167 1.22e-22 89.7
Msa1087970 AT3G62100.1 47.191 89 47 0 87 175 80 168 1.36e-22 89.7
Msa1087970 AT2G46990.1 45.055 91 50 0 87 177 82 172 1.37e-22 89.7
Msa1087970 AT2G46990.2 47.368 76 40 0 87 162 82 157 1.99e-17 75.9
Msa1087970 AT3G62100.2 47.368 76 40 0 87 162 80 155 6.09e-17 74.3
Msa1087970 AT4G32280.2 40.698 86 46 2 90 175 118 198 4.57e-15 70.5
Msa1087970 AT4G32280.1 40.698 86 46 2 90 175 160 240 1.43e-14 70.1
Msa1087970 AT1G80390.1 35.115 131 55 4 2 125 15 122 2.08e-14 67.0
Msa1087970 AT1G15050.2 39.326 89 53 1 91 179 62 149 7.42e-12 60.8
Msa1087970 AT1G15050.1 39.326 89 53 1 91 179 94 181 1.37e-11 60.8
Msa1087970 AT2G46530.1 37.363 91 51 2 92 182 493 577 7.38e-11 60.5
Msa1087970 AT2G46530.2 37.363 91 51 2 92 182 406 490 7.43e-11 60.5
Msa1087970 AT2G46530.3 37.363 91 51 2 92 182 514 598 8.34e-11 60.5

Find 65 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCAATTGCTGGAGCTAA+TGG 0.222205 7_3:+741759 Msa1087970:three_prime_UTR
TTCTGAAAGAGAGGGTTATA+AGG 0.253325 7_3:+740895 Msa1087970:CDS
AGAATCTGTTTCAATTTCTA+AGG 0.274640 7_3:+740092 Msa1087970:CDS
TCTAGAGCTTTGAGAAGTTC+TGG 0.300281 7_3:-740536 None:intergenic
AAAGTCAATCTTTCAATTGC+TGG 0.315268 7_3:+741750 Msa1087970:three_prime_UTR
GGCACAGAAGCTAGAGGTTT+GGG 0.319290 7_3:+741657 Msa1087970:CDS
AGTCAATCTTTCTAAGATAA+GGG 0.338441 7_3:-740493 None:intergenic
AAGATTGACTTGAGGATCTA+TGG 0.344542 7_3:+740506 Msa1087970:CDS
TTTGAATGCCAATCTTGATT+TGG 0.346287 7_3:+741784 Msa1087970:three_prime_UTR
GGCCACCAATTAGGTCTTAC+AGG 0.362405 7_3:+740408 Msa1087970:CDS
TGGTTAATTTAGCATCTTGA+TGG 0.369559 7_3:+741854 Msa1087970:three_prime_UTR
CAAGGCAACTGAGCTTAGAT+TGG 0.382816 7_3:+739981 Msa1087970:CDS
TAGTAGGGTGGCCACCAATT+AGG 0.390633 7_3:+740399 Msa1087970:CDS
CATAAGCAAGATGGAATTCA+AGG 0.408971 7_3:+739963 Msa1087970:exon
AAGTCAATCTTTCTAAGATA+AGG 0.419964 7_3:-740494 None:intergenic
AGGCACAGAAGCTAGAGGTT+TGG 0.423043 7_3:+741656 Msa1087970:CDS
GAAGCTAGAGGTTTGGGTTG+TGG 0.426186 7_3:+741663 Msa1087970:CDS
TTGATTAAAACTTACTTGGC+AGG 0.428702 7_3:-740159 None:intergenic
GTCACCATCCTTGTCTTCAT+AGG 0.428945 7_3:-740936 None:intergenic
TATTGCAGGGCAAAGATAGT+AGG 0.441299 7_3:+740383 Msa1087970:intron
CCATCCTTGTCTTCATAGGT+TGG 0.460968 7_3:-740932 None:intergenic
AAGGCAACTGAGCTTAGATT+GGG 0.478858 7_3:+739982 Msa1087970:CDS
ACAGATTCTTCAGAAGTTTG+AGG 0.488351 7_3:-740078 None:intergenic
TCTCCCTTCCAAATCAAGAT+TGG 0.500719 7_3:-741792 None:intergenic
AATGCCAATCTTGATTTGGA+AGG 0.502897 7_3:+741788 Msa1087970:three_prime_UTR
GGTTAATTTAGCATCTTGAT+GGG 0.508569 7_3:+741855 Msa1087970:three_prime_UTR
GAGCTTAGATTGGGATTACC+AGG 0.513920 7_3:+739991 Msa1087970:CDS
ATCTTGATTTGGAAGGGAGA+TGG 0.516791 7_3:+741795 Msa1087970:three_prime_UTR
TTCCTGTAAGACCTAATTGG+TGG 0.520095 7_3:-740410 None:intergenic
TCTGAAAGAGAGGGTTATAA+GGG 0.521294 7_3:+740896 Msa1087970:CDS
ATTACCAGGGACAGATGAAA+AGG 0.535679 7_3:+740005 Msa1087970:CDS
TAAAACTTACTTGGCAGGAG+GGG 0.540132 7_3:-740154 None:intergenic
GATGGTGACTGGATGCTAGT+TGG 0.551132 7_3:+740950 Msa1087970:CDS
ATGCCAATCTTGATTTGGAA+GGG 0.554257 7_3:+741789 Msa1087970:three_prime_UTR
AATTAGAATTAGAAGAGTCA+TGG 0.559360 7_3:+741971 Msa1087970:three_prime_UTR
AGGTGAGTATTCTGAAAGAG+AGG 0.559449 7_3:+740886 Msa1087970:intron
TGTAACAATTGTGTGAAAGT+AGG 0.559942 7_3:-739831 None:intergenic
TGCTAGTTGGAGATGTTCCA+TGG 0.562736 7_3:+740963 Msa1087970:CDS
GTCAATCTTTCTAAGATAAG+GGG 0.570265 7_3:-740492 None:intergenic
ACCTATGGTCAATTTGAACA+TGG 0.570995 7_3:-740561 None:intergenic
ATTGCAGGGCAAAGATAGTA+GGG 0.580888 7_3:+740384 Msa1087970:intron
TTGCAAGATGCTGAAGTTGG+TGG 0.588995 7_3:+740440 Msa1087970:CDS
GGATAGAGAACTTACTCCCA+TGG 0.589343 7_3:-740980 None:intergenic
ATCTTAGAAAGATTGACTTG+AGG 0.591443 7_3:+740498 Msa1087970:CDS
ACCATGTTCAAATTGACCAT+AGG 0.594986 7_3:+740560 Msa1087970:CDS
ACTTTGCAAGATGCTGAAGT+TGG 0.595544 7_3:+740437 Msa1087970:CDS
ATTAAAACTTACTTGGCAGG+AGG 0.597037 7_3:-740156 None:intergenic
TATGTGAAAGTGAGCATGGA+TGG 0.607005 7_3:+740467 Msa1087970:CDS
ATGAAGACAAGGATGGTGAC+TGG 0.608145 7_3:+740939 Msa1087970:CDS
TTAAAACTTACTTGGCAGGA+GGG 0.608705 7_3:-740155 None:intergenic
ATGTTATTGAAAATGTTCAG+TGG 0.608738 7_3:-741906 None:intergenic
TGCAAGATGCTGAAGTTGGT+GGG 0.610809 7_3:+740441 Msa1087970:CDS
GGTGAGTATTCTGAAAGAGA+GGG 0.617046 7_3:+740887 Msa1087970:intron
GCTAGTTGGAGATGTTCCAT+GGG 0.627077 7_3:+740964 Msa1087970:CDS
GATCTATGTGAAAGTGAGCA+TGG 0.629421 7_3:+740463 Msa1087970:CDS
AAGGAGATGAAAACAATACA+TGG 0.630474 7_3:+740024 Msa1087970:CDS
AAAAGACTAAGAATCATGAA+AGG 0.643848 7_3:+741636 Msa1087970:CDS
TGCACCAACCTATGAAGACA+AGG 0.644295 7_3:+740928 Msa1087970:CDS
TTCAAATGATGATCAGCATG+TGG 0.651916 7_3:+740116 Msa1087970:CDS
AGCTTAGATTGGGATTACCA+GGG 0.671776 7_3:+739992 Msa1087970:CDS
GTGTGAAAGTAGGAAATGCA+AGG 0.671895 7_3:-739821 None:intergenic
CCAACCTATGAAGACAAGGA+TGG 0.673846 7_3:+740932 Msa1087970:CDS
ATGAAAGGCACAGAAGCTAG+AGG 0.675055 7_3:+741651 Msa1087970:CDS
ATTGACTTGAGGATCTATGG+AGG 0.689707 7_3:+740509 Msa1087970:CDS
GCAGGGCAAAGATAGTAGGG+TGG 0.730499 7_3:+740387 Msa1087970:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATTTTGTTTTTTGTTT+TGG + chr7_3:740594-740613 Msa1087970:intron 10.0%
!!! TAAAATTTTGTTTTTTGTTT+TGG + chr7_3:740594-740613 Msa1087970:intron 10.0%
!!! ATATTTTGTAATTGAATTAG+AGG + chr7_3:739934-739953 Msa1087970:five_prime_UTR 15.0%
!!! TATTTTGTAATTGAATTAGA+GGG + chr7_3:739935-739954 Msa1087970:five_prime_UTR 15.0%
!!! ATATTTTGTAATTGAATTAG+AGG + chr7_3:739934-739953 Msa1087970:five_prime_UTR 15.0%
!!! TATTTTGTAATTGAATTAGA+GGG + chr7_3:739935-739954 Msa1087970:five_prime_UTR 15.0%
!!! TATAGTCACTATAAAGTTTT+AGG - chr7_3:739915-739934 None:intergenic 20.0%
!! AAATCTTAATCATATGATTG+CGG + chr7_3:740735-740754 Msa1087970:intron 20.0%
!!! TATAGTCACTATAAAGTTTT+AGG - chr7_3:739915-739934 None:intergenic 20.0%
!! AAATCTTAATCATATGATTG+CGG + chr7_3:740735-740754 Msa1087970:intron 20.0%
!!! TTCTTTTGAGATGTTAAAAG+AGG - chr7_3:739862-739881 None:intergenic 25.0%
!! TCTTTTAACATCTCAAAAGA+AGG + chr7_3:739861-739880 Msa1087970:five_prime_UTR 25.0%
! AGAATCTGTTTCAATTTCTA+AGG + chr7_3:740092-740111 Msa1087970:CDS 25.0%
! CTTCTTGATTAAAACTTACT+TGG - chr7_3:740166-740185 None:intergenic 25.0%
!!! CAAGTAAGTTTTAATCAAGA+AGG + chr7_3:740164-740183 Msa1087970:intron 25.0%
! AAACTTTCTCTTGTAAAAAG+TGG + chr7_3:740191-740210 Msa1087970:intron 25.0%
!!! CAAGAATTTTTTTGTTTGTG+TGG + chr7_3:740322-740341 Msa1087970:intron 25.0%
! TAATTTGATGTTGATATTGC+AGG + chr7_3:740369-740388 Msa1087970:intron 25.0%
! AATTTGATGTTGATATTGCA+GGG + chr7_3:740370-740389 Msa1087970:intron 25.0%
!!! AGTCAATCTTTCTAAGATAA+GGG - chr7_3:740496-740515 None:intergenic 25.0%
!!! AAGTCAATCTTTCTAAGATA+AGG - chr7_3:740497-740516 None:intergenic 25.0%
!! TTTTATCTGTATCTTACCTA+TGG - chr7_3:740579-740598 None:intergenic 25.0%
! TCAAATAAGCTAATCAAAAC+AGG - chr7_3:741104-741123 None:intergenic 25.0%
!!! GCTTATTTGAGTTTATCTTT+TGG + chr7_3:741114-741133 Msa1087970:intron 25.0%
! GATAAACTGAAAACAACTTA+TGG - chr7_3:741201-741220 None:intergenic 25.0%
!!! TAATTTTAATAGTCTGCGAT+CGG + chr7_3:741499-741518 Msa1087970:intron 25.0%
! TAACAGACAAACAATCAAAT+TGG - chr7_3:741553-741572 None:intergenic 25.0%
! AAAAGACTAAGAATCATGAA+AGG + chr7_3:741636-741655 Msa1087970:CDS 25.0%
!! TTTTTCTTGCATATAGTCAT+AGG - chr7_3:741713-741732 None:intergenic 25.0%
!! ATATGCAAGAAAAAGAGTTT+TGG + chr7_3:741719-741738 Msa1087970:three_prime_UTR 25.0%
!! AAACTTTGTCAACATGTTTT+TGG + chr7_3:741834-741853 Msa1087970:three_prime_UTR 25.0%
! ATGTTATTGAAAATGTTCAG+TGG - chr7_3:741909-741928 None:intergenic 25.0%
! AATTAGAATTAGAAGAGTCA+TGG + chr7_3:741971-741990 Msa1087970:three_prime_UTR 25.0%
!!! TACGTAGTTATTTTTTTGAC+AGG + chr7_3:742028-742047 Msa1087970:three_prime_UTR 25.0%
!!! TTCTTTTGAGATGTTAAAAG+AGG - chr7_3:739862-739881 None:intergenic 25.0%
!! TCTTTTAACATCTCAAAAGA+AGG + chr7_3:739861-739880 Msa1087970:five_prime_UTR 25.0%
! AGAATCTGTTTCAATTTCTA+AGG + chr7_3:740092-740111 Msa1087970:CDS 25.0%
! CTTCTTGATTAAAACTTACT+TGG - chr7_3:740166-740185 None:intergenic 25.0%
!!! CAAGTAAGTTTTAATCAAGA+AGG + chr7_3:740164-740183 Msa1087970:intron 25.0%
! AAACTTTCTCTTGTAAAAAG+TGG + chr7_3:740191-740210 Msa1087970:intron 25.0%
!!! CAAGAATTTTTTTGTTTGTG+TGG + chr7_3:740322-740341 Msa1087970:intron 25.0%
! TAATTTGATGTTGATATTGC+AGG + chr7_3:740369-740388 Msa1087970:intron 25.0%
! AATTTGATGTTGATATTGCA+GGG + chr7_3:740370-740389 Msa1087970:intron 25.0%
!!! AGTCAATCTTTCTAAGATAA+GGG - chr7_3:740496-740515 None:intergenic 25.0%
!!! AAGTCAATCTTTCTAAGATA+AGG - chr7_3:740497-740516 None:intergenic 25.0%
!! TTTTATCTGTATCTTACCTA+TGG - chr7_3:740579-740598 None:intergenic 25.0%
! TCAAATAAGCTAATCAAAAC+AGG - chr7_3:741104-741123 None:intergenic 25.0%
!!! GCTTATTTGAGTTTATCTTT+TGG + chr7_3:741114-741133 Msa1087970:intron 25.0%
! GATAAACTGAAAACAACTTA+TGG - chr7_3:741201-741220 None:intergenic 25.0%
!!! TAATTTTAATAGTCTGCGAT+CGG + chr7_3:741499-741518 Msa1087970:intron 25.0%
! TAACAGACAAACAATCAAAT+TGG - chr7_3:741553-741572 None:intergenic 25.0%
! AAAAGACTAAGAATCATGAA+AGG + chr7_3:741636-741655 Msa1087970:CDS 25.0%
!! TTTTTCTTGCATATAGTCAT+AGG - chr7_3:741713-741732 None:intergenic 25.0%
!! ATATGCAAGAAAAAGAGTTT+TGG + chr7_3:741719-741738 Msa1087970:three_prime_UTR 25.0%
!! AAACTTTGTCAACATGTTTT+TGG + chr7_3:741834-741853 Msa1087970:three_prime_UTR 25.0%
! ATGTTATTGAAAATGTTCAG+TGG - chr7_3:741909-741928 None:intergenic 25.0%
! AATTAGAATTAGAAGAGTCA+TGG + chr7_3:741971-741990 Msa1087970:three_prime_UTR 25.0%
!!! TACGTAGTTATTTTTTTGAC+AGG + chr7_3:742028-742047 Msa1087970:three_prime_UTR 25.0%
! AATGCAAGGTTGTGTTTTAT+AGG - chr7_3:739810-739829 None:intergenic 30.0%
TGTAACAATTGTGTGAAAGT+AGG - chr7_3:739834-739853 None:intergenic 30.0%
AAGGAGATGAAAACAATACA+TGG + chr7_3:740024-740043 Msa1087970:CDS 30.0%
TTGATTAAAACTTACTTGGC+AGG - chr7_3:740162-740181 None:intergenic 30.0%
! TTTTTCCTGTAAGACCTAAT+TGG - chr7_3:740416-740435 None:intergenic 30.0%
!! GTCAATCTTTCTAAGATAAG+GGG - chr7_3:740495-740514 None:intergenic 30.0%
!! ATCTTAGAAAGATTGACTTG+AGG + chr7_3:740498-740517 Msa1087970:CDS 30.0%
!! AGTTATGTATAGACTAGTCT+TGG + chr7_3:740790-740809 Msa1087970:intron 30.0%
TTTATTGTGGTGAAACTAGT+TGG + chr7_3:740814-740833 Msa1087970:intron 30.0%
!!! GAAATTGTGCTTTGTTTTTC+AGG + chr7_3:740866-740885 Msa1087970:intron 30.0%
AGATAAAGCAAACACACAAA+TGG - chr7_3:741004-741023 None:intergenic 30.0%
CTGAAAACAACTTATGGTTA+TGG - chr7_3:741195-741214 None:intergenic 30.0%
! ATTATTCCTGGTGTCAATTT+GGG + chr7_3:741390-741409 Msa1087970:intron 30.0%
!!! ATCCTCTAGAACTAATGTTT+TGG - chr7_3:741530-741549 None:intergenic 30.0%
!!! GAAAAAGAGTTTTGGTGTTT+AGG + chr7_3:741727-741746 Msa1087970:three_prime_UTR 30.0%
AAAGTCAATCTTTCAATTGC+TGG + chr7_3:741750-741769 Msa1087970:three_prime_UTR 30.0%
TTTGAATGCCAATCTTGATT+TGG + chr7_3:741784-741803 Msa1087970:three_prime_UTR 30.0%
TGGTTAATTTAGCATCTTGA+TGG + chr7_3:741854-741873 Msa1087970:three_prime_UTR 30.0%
GGTTAATTTAGCATCTTGAT+GGG + chr7_3:741855-741874 Msa1087970:three_prime_UTR 30.0%
! AATGCAAGGTTGTGTTTTAT+AGG - chr7_3:739810-739829 None:intergenic 30.0%
TGTAACAATTGTGTGAAAGT+AGG - chr7_3:739834-739853 None:intergenic 30.0%
AAGGAGATGAAAACAATACA+TGG + chr7_3:740024-740043 Msa1087970:CDS 30.0%
TTGATTAAAACTTACTTGGC+AGG - chr7_3:740162-740181 None:intergenic 30.0%
! TTTTTCCTGTAAGACCTAAT+TGG - chr7_3:740416-740435 None:intergenic 30.0%
!! GTCAATCTTTCTAAGATAAG+GGG - chr7_3:740495-740514 None:intergenic 30.0%
!! ATCTTAGAAAGATTGACTTG+AGG + chr7_3:740498-740517 Msa1087970:CDS 30.0%
!! AGTTATGTATAGACTAGTCT+TGG + chr7_3:740790-740809 Msa1087970:intron 30.0%
TTTATTGTGGTGAAACTAGT+TGG + chr7_3:740814-740833 Msa1087970:intron 30.0%
!!! GAAATTGTGCTTTGTTTTTC+AGG + chr7_3:740866-740885 Msa1087970:intron 30.0%
AGATAAAGCAAACACACAAA+TGG - chr7_3:741004-741023 None:intergenic 30.0%
CTGAAAACAACTTATGGTTA+TGG - chr7_3:741195-741214 None:intergenic 30.0%
! ATTATTCCTGGTGTCAATTT+GGG + chr7_3:741390-741409 Msa1087970:intron 30.0%
!!! ATCCTCTAGAACTAATGTTT+TGG - chr7_3:741530-741549 None:intergenic 30.0%
!!! GAAAAAGAGTTTTGGTGTTT+AGG + chr7_3:741727-741746 Msa1087970:three_prime_UTR 30.0%
AAAGTCAATCTTTCAATTGC+TGG + chr7_3:741750-741769 Msa1087970:three_prime_UTR 30.0%
TTTGAATGCCAATCTTGATT+TGG + chr7_3:741784-741803 Msa1087970:three_prime_UTR 30.0%
TGGTTAATTTAGCATCTTGA+TGG + chr7_3:741854-741873 Msa1087970:three_prime_UTR 30.0%
GGTTAATTTAGCATCTTGAT+GGG + chr7_3:741855-741874 Msa1087970:three_prime_UTR 30.0%
CATAAGCAAGATGGAATTCA+AGG + chr7_3:739963-739982 Msa1087970:exon 35.0%
ACAGATTCTTCAGAAGTTTG+AGG - chr7_3:740081-740100 None:intergenic 35.0%
TTCAAATGATGATCAGCATG+TGG + chr7_3:740116-740135 Msa1087970:CDS 35.0%
TTAAAACTTACTTGGCAGGA+GGG - chr7_3:740158-740177 None:intergenic 35.0%
ATTAAAACTTACTTGGCAGG+AGG - chr7_3:740159-740178 None:intergenic 35.0%
! GAATCTTTTGTCTCATCAAG+AGG - chr7_3:740303-740322 None:intergenic 35.0%
!! AAGATTGACTTGAGGATCTA+TGG + chr7_3:740506-740525 Msa1087970:CDS 35.0%
ACCATGTTCAAATTGACCAT+AGG + chr7_3:740560-740579 Msa1087970:CDS 35.0%
ACCTATGGTCAATTTGAACA+TGG - chr7_3:740564-740583 None:intergenic 35.0%
TTTAAATTGCAATCGCGTCT+AGG + chr7_3:740624-740643 Msa1087970:intron 35.0%
TTAAATTGCAATCGCGTCTA+GGG + chr7_3:740625-740644 Msa1087970:intron 35.0%
GACTGATGTAGTCTCAATTA+TGG + chr7_3:740682-740701 Msa1087970:intron 35.0%
!!! GACTAGTCTTGGTTTTATTG+TGG + chr7_3:740801-740820 Msa1087970:intron 35.0%
! TTCTGAAAGAGAGGGTTATA+AGG + chr7_3:740895-740914 Msa1087970:CDS 35.0%
TCTGAAAGAGAGGGTTATAA+GGG + chr7_3:740896-740915 Msa1087970:CDS 35.0%
! AGCCTCTTTGAGAAAGTTTA+GGG + chr7_3:741151-741170 Msa1087970:intron 35.0%
TTCCCTAAACTTTCTCAAAG+AGG - chr7_3:741156-741175 None:intergenic 35.0%
! GATTATTCCTGGTGTCAATT+TGG + chr7_3:741389-741408 Msa1087970:intron 35.0%
!! CTCCAAAACATTAGTTCTAG+AGG + chr7_3:741525-741544 Msa1087970:intron 35.0%
!! CATGATTCTTAGTCTTTTGC+AGG - chr7_3:741634-741653 None:intergenic 35.0%
!! AATGCCAATCTTGATTTGGA+AGG + chr7_3:741788-741807 Msa1087970:three_prime_UTR 35.0%
!! ATGCCAATCTTGATTTGGAA+GGG + chr7_3:741789-741808 Msa1087970:three_prime_UTR 35.0%
CATAAGCAAGATGGAATTCA+AGG + chr7_3:739963-739982 Msa1087970:exon 35.0%
ACAGATTCTTCAGAAGTTTG+AGG - chr7_3:740081-740100 None:intergenic 35.0%
TTCAAATGATGATCAGCATG+TGG + chr7_3:740116-740135 Msa1087970:CDS 35.0%
TTAAAACTTACTTGGCAGGA+GGG - chr7_3:740158-740177 None:intergenic 35.0%
ATTAAAACTTACTTGGCAGG+AGG - chr7_3:740159-740178 None:intergenic 35.0%
! GAATCTTTTGTCTCATCAAG+AGG - chr7_3:740303-740322 None:intergenic 35.0%
!! AAGATTGACTTGAGGATCTA+TGG + chr7_3:740506-740525 Msa1087970:CDS 35.0%
ACCATGTTCAAATTGACCAT+AGG + chr7_3:740560-740579 Msa1087970:CDS 35.0%
ACCTATGGTCAATTTGAACA+TGG - chr7_3:740564-740583 None:intergenic 35.0%
TTTAAATTGCAATCGCGTCT+AGG + chr7_3:740624-740643 Msa1087970:intron 35.0%
TTAAATTGCAATCGCGTCTA+GGG + chr7_3:740625-740644 Msa1087970:intron 35.0%
GACTGATGTAGTCTCAATTA+TGG + chr7_3:740682-740701 Msa1087970:intron 35.0%
!!! GACTAGTCTTGGTTTTATTG+TGG + chr7_3:740801-740820 Msa1087970:intron 35.0%
! TTCTGAAAGAGAGGGTTATA+AGG + chr7_3:740895-740914 Msa1087970:CDS 35.0%
TCTGAAAGAGAGGGTTATAA+GGG + chr7_3:740896-740915 Msa1087970:CDS 35.0%
! AGCCTCTTTGAGAAAGTTTA+GGG + chr7_3:741151-741170 Msa1087970:intron 35.0%
TTCCCTAAACTTTCTCAAAG+AGG - chr7_3:741156-741175 None:intergenic 35.0%
! GATTATTCCTGGTGTCAATT+TGG + chr7_3:741389-741408 Msa1087970:intron 35.0%
!! CTCCAAAACATTAGTTCTAG+AGG + chr7_3:741525-741544 Msa1087970:intron 35.0%
!! CATGATTCTTAGTCTTTTGC+AGG - chr7_3:741634-741653 None:intergenic 35.0%
!! AATGCCAATCTTGATTTGGA+AGG + chr7_3:741788-741807 Msa1087970:three_prime_UTR 35.0%
!! ATGCCAATCTTGATTTGGAA+GGG + chr7_3:741789-741808 Msa1087970:three_prime_UTR 35.0%
GTGTGAAAGTAGGAAATGCA+AGG - chr7_3:739824-739843 None:intergenic 40.0%
! AGGGTTTTGCATAAGCAAGA+TGG + chr7_3:739954-739973 Msa1087970:exon 40.0%
AAGGCAACTGAGCTTAGATT+GGG + chr7_3:739982-740001 Msa1087970:CDS 40.0%
AGCTTAGATTGGGATTACCA+GGG + chr7_3:739992-740011 Msa1087970:CDS 40.0%
ATTACCAGGGACAGATGAAA+AGG + chr7_3:740005-740024 Msa1087970:CDS 40.0%
TAAAACTTACTTGGCAGGAG+GGG - chr7_3:740157-740176 None:intergenic 40.0%
TACTACCATGCAGCTGTATA+GGG - chr7_3:740218-740237 None:intergenic 40.0%
TATACAGCTGCATGGTAGTA+CGG + chr7_3:740218-740237 Msa1087970:intron 40.0%
TATTGCAGGGCAAAGATAGT+AGG + chr7_3:740383-740402 Msa1087970:intron 40.0%
ATTGCAGGGCAAAGATAGTA+GGG + chr7_3:740384-740403 Msa1087970:intron 40.0%
TTCCTGTAAGACCTAATTGG+TGG - chr7_3:740413-740432 None:intergenic 40.0%
ACTTTGCAAGATGCTGAAGT+TGG + chr7_3:740437-740456 Msa1087970:CDS 40.0%
GATCTATGTGAAAGTGAGCA+TGG + chr7_3:740463-740482 Msa1087970:CDS 40.0%
TATGTGAAAGTGAGCATGGA+TGG + chr7_3:740467-740486 Msa1087970:CDS 40.0%
!! ATTGACTTGAGGATCTATGG+AGG + chr7_3:740509-740528 Msa1087970:CDS 40.0%
!! TCTAGAGCTTTGAGAAGTTC+TGG - chr7_3:740539-740558 None:intergenic 40.0%
! AGGTGAGTATTCTGAAAGAG+AGG + chr7_3:740886-740905 Msa1087970:intron 40.0%
! GGTGAGTATTCTGAAAGAGA+GGG + chr7_3:740887-740906 Msa1087970:intron 40.0%
!! GAACTTAGATCCTCTGAAGT+TGG + chr7_3:741048-741067 Msa1087970:intron 40.0%
!! ATCCTCTGAAGTTGGCTTTA+TGG + chr7_3:741056-741075 Msa1087970:intron 40.0%
TACCATAAAGCCAACTTCAG+AGG - chr7_3:741061-741080 None:intergenic 40.0%
GTAGCAGATAGTTCGATTGT+TGG + chr7_3:741078-741097 Msa1087970:intron 40.0%
! GAGCCTCTTTGAGAAAGTTT+AGG + chr7_3:741150-741169 Msa1087970:intron 40.0%
!! GTCATTTTCATCGACCATCA+TGG - chr7_3:741236-741255 None:intergenic 40.0%
TAATCGAACCTAAGACCTTG+AGG - chr7_3:741374-741393 None:intergenic 40.0%
GTCTTAGGTTCGATTATTCC+TGG + chr7_3:741378-741397 Msa1087970:intron 40.0%
CTTTCAATTGCTGGAGCTAA+TGG + chr7_3:741759-741778 Msa1087970:three_prime_UTR 40.0%
TCTCCCTTCCAAATCAAGAT+TGG - chr7_3:741795-741814 None:intergenic 40.0%
!! ATCTTGATTTGGAAGGGAGA+TGG + chr7_3:741795-741814 Msa1087970:three_prime_UTR 40.0%
GTGTGAAAGTAGGAAATGCA+AGG - chr7_3:739824-739843 None:intergenic 40.0%
! AGGGTTTTGCATAAGCAAGA+TGG + chr7_3:739954-739973 Msa1087970:exon 40.0%
AAGGCAACTGAGCTTAGATT+GGG + chr7_3:739982-740001 Msa1087970:CDS 40.0%
AGCTTAGATTGGGATTACCA+GGG + chr7_3:739992-740011 Msa1087970:CDS 40.0%
ATTACCAGGGACAGATGAAA+AGG + chr7_3:740005-740024 Msa1087970:CDS 40.0%
TAAAACTTACTTGGCAGGAG+GGG - chr7_3:740157-740176 None:intergenic 40.0%
TACTACCATGCAGCTGTATA+GGG - chr7_3:740218-740237 None:intergenic 40.0%
TATACAGCTGCATGGTAGTA+CGG + chr7_3:740218-740237 Msa1087970:intron 40.0%
TATTGCAGGGCAAAGATAGT+AGG + chr7_3:740383-740402 Msa1087970:intron 40.0%
ATTGCAGGGCAAAGATAGTA+GGG + chr7_3:740384-740403 Msa1087970:intron 40.0%
TTCCTGTAAGACCTAATTGG+TGG - chr7_3:740413-740432 None:intergenic 40.0%
ACTTTGCAAGATGCTGAAGT+TGG + chr7_3:740437-740456 Msa1087970:CDS 40.0%
GATCTATGTGAAAGTGAGCA+TGG + chr7_3:740463-740482 Msa1087970:CDS 40.0%
TATGTGAAAGTGAGCATGGA+TGG + chr7_3:740467-740486 Msa1087970:CDS 40.0%
!! ATTGACTTGAGGATCTATGG+AGG + chr7_3:740509-740528 Msa1087970:CDS 40.0%
!! TCTAGAGCTTTGAGAAGTTC+TGG - chr7_3:740539-740558 None:intergenic 40.0%
! AGGTGAGTATTCTGAAAGAG+AGG + chr7_3:740886-740905 Msa1087970:intron 40.0%
! GGTGAGTATTCTGAAAGAGA+GGG + chr7_3:740887-740906 Msa1087970:intron 40.0%
!! GAACTTAGATCCTCTGAAGT+TGG + chr7_3:741048-741067 Msa1087970:intron 40.0%
!! ATCCTCTGAAGTTGGCTTTA+TGG + chr7_3:741056-741075 Msa1087970:intron 40.0%
TACCATAAAGCCAACTTCAG+AGG - chr7_3:741061-741080 None:intergenic 40.0%
GTAGCAGATAGTTCGATTGT+TGG + chr7_3:741078-741097 Msa1087970:intron 40.0%
! GAGCCTCTTTGAGAAAGTTT+AGG + chr7_3:741150-741169 Msa1087970:intron 40.0%
!! GTCATTTTCATCGACCATCA+TGG - chr7_3:741236-741255 None:intergenic 40.0%
TAATCGAACCTAAGACCTTG+AGG - chr7_3:741374-741393 None:intergenic 40.0%
GTCTTAGGTTCGATTATTCC+TGG + chr7_3:741378-741397 Msa1087970:intron 40.0%
CTTTCAATTGCTGGAGCTAA+TGG + chr7_3:741759-741778 Msa1087970:three_prime_UTR 40.0%
TCTCCCTTCCAAATCAAGAT+TGG - chr7_3:741795-741814 None:intergenic 40.0%
!! ATCTTGATTTGGAAGGGAGA+TGG + chr7_3:741795-741814 Msa1087970:three_prime_UTR 40.0%
CAAGGCAACTGAGCTTAGAT+TGG + chr7_3:739981-740000 Msa1087970:CDS 45.0%
GAGCTTAGATTGGGATTACC+AGG + chr7_3:739991-740010 Msa1087970:CDS 45.0%
! ATCTCCTTTTCATCTGTCCC+TGG - chr7_3:740012-740031 None:intergenic 45.0%
GTACTACCATGCAGCTGTAT+AGG - chr7_3:740219-740238 None:intergenic 45.0%
ATACGTACTGCAACCGTTCA+GGG + chr7_3:740276-740295 Msa1087970:intron 45.0%
TTGCAAGATGCTGAAGTTGG+TGG + chr7_3:740440-740459 Msa1087970:CDS 45.0%
! TGCAAGATGCTGAAGTTGGT+GGG + chr7_3:740441-740460 Msa1087970:CDS 45.0%
TGCACCAACCTATGAAGACA+AGG + chr7_3:740928-740947 Msa1087970:CDS 45.0%
CCATCCTTGTCTTCATAGGT+TGG - chr7_3:740935-740954 None:intergenic 45.0%
CCAACCTATGAAGACAAGGA+TGG + chr7_3:740932-740951 Msa1087970:CDS 45.0%
GTCACCATCCTTGTCTTCAT+AGG - chr7_3:740939-740958 None:intergenic 45.0%
ATGAAGACAAGGATGGTGAC+TGG + chr7_3:740939-740958 Msa1087970:CDS 45.0%
TGCTAGTTGGAGATGTTCCA+TGG + chr7_3:740963-740982 Msa1087970:CDS 45.0%
GCTAGTTGGAGATGTTCCAT+GGG + chr7_3:740964-740983 Msa1087970:CDS 45.0%
GGATAGAGAACTTACTCCCA+TGG - chr7_3:740983-741002 None:intergenic 45.0%
CATCGACCATCATGGAAAAC+TGG - chr7_3:741228-741247 None:intergenic 45.0%
AGCACTTACTCTAACCCACT+TGG + chr7_3:741305-741324 Msa1087970:intron 45.0%
GCACTTACTCTAACCCACTT+GGG + chr7_3:741306-741325 Msa1087970:intron 45.0%
TTACTCTAACCCACTTGGGT+TGG + chr7_3:741310-741329 Msa1087970:intron 45.0%
!! TTGGGTTGGTCTGATGGTAT+TGG + chr7_3:741324-741343 Msa1087970:intron 45.0%
!! TTGGTCTGATGGTATTGGCT+TGG + chr7_3:741329-741348 Msa1087970:intron 45.0%
!! TGGTCTGATGGTATTGGCTT+GGG + chr7_3:741330-741349 Msa1087970:intron 45.0%
! ATTCCTGGTGTCAATTTGGG+TGG + chr7_3:741393-741412 Msa1087970:intron 45.0%
! TTCCTGGTGTCAATTTGGGT+GGG + chr7_3:741394-741413 Msa1087970:intron 45.0%
! ATGAAAGGCACAGAAGCTAG+AGG + chr7_3:741651-741670 Msa1087970:CDS 45.0%
CAAGGCAACTGAGCTTAGAT+TGG + chr7_3:739981-740000 Msa1087970:CDS 45.0%
GAGCTTAGATTGGGATTACC+AGG + chr7_3:739991-740010 Msa1087970:CDS 45.0%
! ATCTCCTTTTCATCTGTCCC+TGG - chr7_3:740012-740031 None:intergenic 45.0%
GTACTACCATGCAGCTGTAT+AGG - chr7_3:740219-740238 None:intergenic 45.0%
ATACGTACTGCAACCGTTCA+GGG + chr7_3:740276-740295 Msa1087970:intron 45.0%
TTGCAAGATGCTGAAGTTGG+TGG + chr7_3:740440-740459 Msa1087970:CDS 45.0%
! TGCAAGATGCTGAAGTTGGT+GGG + chr7_3:740441-740460 Msa1087970:CDS 45.0%
TGCACCAACCTATGAAGACA+AGG + chr7_3:740928-740947 Msa1087970:CDS 45.0%
CCATCCTTGTCTTCATAGGT+TGG - chr7_3:740935-740954 None:intergenic 45.0%
CCAACCTATGAAGACAAGGA+TGG + chr7_3:740932-740951 Msa1087970:CDS 45.0%
GTCACCATCCTTGTCTTCAT+AGG - chr7_3:740939-740958 None:intergenic 45.0%
ATGAAGACAAGGATGGTGAC+TGG + chr7_3:740939-740958 Msa1087970:CDS 45.0%
TGCTAGTTGGAGATGTTCCA+TGG + chr7_3:740963-740982 Msa1087970:CDS 45.0%
GCTAGTTGGAGATGTTCCAT+GGG + chr7_3:740964-740983 Msa1087970:CDS 45.0%
GGATAGAGAACTTACTCCCA+TGG - chr7_3:740983-741002 None:intergenic 45.0%
CATCGACCATCATGGAAAAC+TGG - chr7_3:741228-741247 None:intergenic 45.0%
AGCACTTACTCTAACCCACT+TGG + chr7_3:741305-741324 Msa1087970:intron 45.0%
GCACTTACTCTAACCCACTT+GGG + chr7_3:741306-741325 Msa1087970:intron 45.0%
TTACTCTAACCCACTTGGGT+TGG + chr7_3:741310-741329 Msa1087970:intron 45.0%
!! TTGGGTTGGTCTGATGGTAT+TGG + chr7_3:741324-741343 Msa1087970:intron 45.0%
!! TTGGTCTGATGGTATTGGCT+TGG + chr7_3:741329-741348 Msa1087970:intron 45.0%
!! TGGTCTGATGGTATTGGCTT+GGG + chr7_3:741330-741349 Msa1087970:intron 45.0%
! ATTCCTGGTGTCAATTTGGG+TGG + chr7_3:741393-741412 Msa1087970:intron 45.0%
! TTCCTGGTGTCAATTTGGGT+GGG + chr7_3:741394-741413 Msa1087970:intron 45.0%
! ATGAAAGGCACAGAAGCTAG+AGG + chr7_3:741651-741670 Msa1087970:CDS 45.0%
CTGAACGGTTGCAGTACGTA+TGG - chr7_3:740277-740296 None:intergenic 50.0%
CATACGTACTGCAACCGTTC+AGG + chr7_3:740275-740294 Msa1087970:intron 50.0%
CTCATCAAGAGGACCCTGAA+CGG - chr7_3:740292-740311 None:intergenic 50.0%
TAGTAGGGTGGCCACCAATT+AGG + chr7_3:740399-740418 Msa1087970:CDS 50.0%
GGCCACCAATTAGGTCTTAC+AGG + chr7_3:740408-740427 Msa1087970:CDS 50.0%
GATGGTGACTGGATGCTAGT+TGG + chr7_3:740950-740969 Msa1087970:CDS 50.0%
! TCCTCGCCAGTTTTCCATGA+TGG + chr7_3:741219-741238 Msa1087970:intron 50.0%
ACCATCATGGAAAACTGGCG+AGG - chr7_3:741223-741242 None:intergenic 50.0%
ACCATCAGACCAACCCAAGT+GGG - chr7_3:741322-741341 None:intergenic 50.0%
TACCATCAGACCAACCCAAG+TGG - chr7_3:741323-741342 None:intergenic 50.0%
!! GGTCTGATGGTATTGGCTTG+GGG + chr7_3:741331-741350 Msa1087970:intron 50.0%
!! ATGGTATTGGCTTGGGGTCT+GGG + chr7_3:741337-741356 Msa1087970:intron 50.0%
TCGAACCTAAGACCTTGAGG+AGG - chr7_3:741371-741390 None:intergenic 50.0%
AGGCACAGAAGCTAGAGGTT+TGG + chr7_3:741656-741675 Msa1087970:CDS 50.0%
GGCACAGAAGCTAGAGGTTT+GGG + chr7_3:741657-741676 Msa1087970:CDS 50.0%
!! GAAGCTAGAGGTTTGGGTTG+TGG + chr7_3:741663-741682 Msa1087970:CDS 50.0%
CTGAACGGTTGCAGTACGTA+TGG - chr7_3:740277-740296 None:intergenic 50.0%
CATACGTACTGCAACCGTTC+AGG + chr7_3:740275-740294 Msa1087970:intron 50.0%
CTCATCAAGAGGACCCTGAA+CGG - chr7_3:740292-740311 None:intergenic 50.0%
TAGTAGGGTGGCCACCAATT+AGG + chr7_3:740399-740418 Msa1087970:CDS 50.0%
GGCCACCAATTAGGTCTTAC+AGG + chr7_3:740408-740427 Msa1087970:CDS 50.0%
GATGGTGACTGGATGCTAGT+TGG + chr7_3:740950-740969 Msa1087970:CDS 50.0%
! TCCTCGCCAGTTTTCCATGA+TGG + chr7_3:741219-741238 Msa1087970:intron 50.0%
ACCATCATGGAAAACTGGCG+AGG - chr7_3:741223-741242 None:intergenic 50.0%
ACCATCAGACCAACCCAAGT+GGG - chr7_3:741322-741341 None:intergenic 50.0%
TACCATCAGACCAACCCAAG+TGG - chr7_3:741323-741342 None:intergenic 50.0%
!! GGTCTGATGGTATTGGCTTG+GGG + chr7_3:741331-741350 Msa1087970:intron 50.0%
!! ATGGTATTGGCTTGGGGTCT+GGG + chr7_3:741337-741356 Msa1087970:intron 50.0%
TCGAACCTAAGACCTTGAGG+AGG - chr7_3:741371-741390 None:intergenic 50.0%
AGGCACAGAAGCTAGAGGTT+TGG + chr7_3:741656-741675 Msa1087970:CDS 50.0%
GGCACAGAAGCTAGAGGTTT+GGG + chr7_3:741657-741676 Msa1087970:CDS 50.0%
!! GAAGCTAGAGGTTTGGGTTG+TGG + chr7_3:741663-741682 Msa1087970:CDS 50.0%
GTGGACCCTATACAGCTGCA+TGG + chr7_3:740210-740229 Msa1087970:intron 55.0%
GCAGGGCAAAGATAGTAGGG+TGG + chr7_3:740387-740406 Msa1087970:intron 55.0%
!! ACCCACTTGGGTTGGTCTGA+TGG + chr7_3:741318-741337 Msa1087970:intron 55.0%
!! GATGGTATTGGCTTGGGGTC+TGG + chr7_3:741336-741355 Msa1087970:intron 55.0%
GTGCTCCTCCTCAAGGTCTT+AGG + chr7_3:741363-741382 Msa1087970:intron 55.0%
AGCCCACCCAAATTGACACC+AGG - chr7_3:741399-741418 None:intergenic 55.0%
GTGGACCCTATACAGCTGCA+TGG + chr7_3:740210-740229 Msa1087970:intron 55.0%
GCAGGGCAAAGATAGTAGGG+TGG + chr7_3:740387-740406 Msa1087970:intron 55.0%
!! ACCCACTTGGGTTGGTCTGA+TGG + chr7_3:741318-741337 Msa1087970:intron 55.0%
!! GATGGTATTGGCTTGGGGTC+TGG + chr7_3:741336-741355 Msa1087970:intron 55.0%
GTGCTCCTCCTCAAGGTCTT+AGG + chr7_3:741363-741382 Msa1087970:intron 55.0%
AGCCCACCCAAATTGACACC+AGG - chr7_3:741399-741418 None:intergenic 55.0%
! TGGGAGTGTGCTCCTCCTCA+AGG + chr7_3:741356-741375 Msa1087970:intron 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG + chr7_3:741356-741375 Msa1087970:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 739800 742083 739800 ID=Msa1087970;Name=Msa1087970
chr7_3 mRNA 739800 742083 739800 ID=Msa1087970-mRNA-1;Parent=Msa1087970;Name=Msa1087970-mRNA-1;_AED=0.13;_eAED=0.13;_QI=173|1|1|1|1|1|4|391|186
chr7_3 exon 739800 740166 739800 ID=Msa1087970-mRNA-1:exon:358;Parent=Msa1087970-mRNA-1
chr7_3 exon 740391 740581 740391 ID=Msa1087970-mRNA-1:exon:359;Parent=Msa1087970-mRNA-1
chr7_3 exon 740888 740987 740888 ID=Msa1087970-mRNA-1:exon:360;Parent=Msa1087970-mRNA-1
chr7_3 exon 741617 742083 741617 ID=Msa1087970-mRNA-1:exon:361;Parent=Msa1087970-mRNA-1
chr7_3 five_prime_UTR 739800 739972 739800 ID=Msa1087970-mRNA-1:five_prime_utr;Parent=Msa1087970-mRNA-1
chr7_3 CDS 739973 740166 739973 ID=Msa1087970-mRNA-1:cds;Parent=Msa1087970-mRNA-1
chr7_3 CDS 740391 740581 740391 ID=Msa1087970-mRNA-1:cds;Parent=Msa1087970-mRNA-1
chr7_3 CDS 740888 740987 740888 ID=Msa1087970-mRNA-1:cds;Parent=Msa1087970-mRNA-1
chr7_3 CDS 741617 741692 741617 ID=Msa1087970-mRNA-1:cds;Parent=Msa1087970-mRNA-1
chr7_3 three_prime_UTR 741693 742083 741693 ID=Msa1087970-mRNA-1:three_prime_utr;Parent=Msa1087970-mRNA-1
Gene Sequence

>Msa1087970

ATGGAATTCAAGGCAACTGAGCTTAGATTGGGATTACCAGGGACAGATGAAAAGGAGATGAAAACAATACATGGTAGTGTTGTTAAGAATAACAAAAGACAATTACCTCAAACTTCTGAAGAATCTGTTTCAATTTCTAAGGTTTCAAATGATGATCAGCATGTGGAGAGTTCTTCTGCTGCCCCTCCTGCCAAGGCAAAGATAGTAGGGTGGCCACCAATTAGGTCTTACAGGAAAAACACTTTGCAAGATGCTGAAGTTGGTGGGATCTATGTGAAAGTGAGCATGGATGGTGCCCCTTATCTTAGAAAGATTGACTTGAGGATCTATGGAGGCTATCCAGAACTTCTCAAAGCTCTAGAAACCATGTTCAAATTGACCATAGGTGAGTATTCTGAAAGAGAGGGTTATAAGGGATCTGAATATGCACCAACCTATGAAGACAAGGATGGTGACTGGATGCTAGTTGGAGATGTTCCATGGGACATGTTTGTGACTTCCTGCAAAAGACTAAGAATCATGAAAGGCACAGAAGCTAGAGGTTTGGGTTGTGGTGTATGA
Protein sequence

>Msa1087970

MEFKATELRLGLPGTDEKEMKTIHGSVVKNNKRQLPQTSEESVSISKVSNDDQHVESSSAAPPAKAKIVGWPPIRSYRKNTLQDAEVGGIYVKVSMDGAPYLRKIDLRIYGGYPELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEARGLGCGV*