AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0136190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0136190 MtrunA17_Chr1g0207461 98.560 625 9 0 1 625 1 625 0.0 1264
Msa0136190 MtrunA17_Chr5g0401341 62.323 637 221 9 1 625 1 630 0.0 747
Msa0136190 MtrunA17_Chr1g0150191 55.193 491 212 6 1 487 1 487 0.0 533
Msa0136190 MtrunA17_Chr8g0367891 42.357 628 282 15 1 588 1 588 4.49e-136 410
Msa0136190 MtrunA17_Chr5g0412591 40.221 542 254 8 1 507 1 507 5.03e-124 379
Msa0136190 MtrunA17_Chr4g0076521 36.918 558 308 9 1 541 1 531 3.69e-121 372
Msa0136190 MtrunA17_Chr2g0279481 37.542 594 308 15 5 546 23 605 8.67e-121 374
Msa0136190 MtrunA17_Chr4g0050021 37.828 534 285 8 5 497 23 550 2.57e-119 369
Msa0136190 MtrunA17_Chr2g0303541 39.042 543 298 9 1 518 1 535 1.18e-115 359
Msa0136190 MtrunA17_Chr2g0290741 36.614 508 275 7 1 496 1 473 3.56e-112 348
Msa0136190 MtrunA17_Chr2g0285511 34.026 626 362 13 1 608 1 593 8.52e-107 335
Msa0136190 MtrunA17_Chr1g0181181 35.263 570 312 14 1 546 1 537 3.66e-105 329
Msa0136190 MtrunA17_Chr5g0401451 38.821 492 261 13 25 499 37 505 1.05e-103 327
Msa0136190 MtrunA17_Chr8g0382231 32.343 572 283 14 18 546 42 552 1.05e-98 314
Msa0136190 MtrunA17_Chr2g0320691 34.438 543 312 10 13 528 10 535 1.15e-96 309
Msa0136190 MtrunA17_Chr4g0010091 35.206 534 320 10 23 546 29 546 2.14e-94 303
Msa0136190 MtrunA17_Chr4g0053841 36.456 491 281 9 25 499 10 485 3.12e-94 301
Msa0136190 MtrunA17_Chr1g0195911 34.815 540 305 11 26 549 34 542 1.45e-91 295
Msa0136190 MtrunA17_Chr8g0374011 36.542 509 271 13 23 488 15 514 2.26e-91 296
Msa0136190 MtrunA17_Chr7g0268781 34.637 537 321 11 26 546 34 556 8.02e-87 283
Msa0136190 MtrunA17_Chr7g0245201 33.211 545 321 12 18 546 51 568 3.38e-84 276
Msa0136190 MtrunA17_Chr1g0199631 35.853 463 273 12 46 492 8 462 2.81e-82 270
Msa0136190 MtrunA17_Chr3g0108331 34.025 482 268 10 25 493 21 465 2.61e-80 264
Msa0136190 MtrunA17_Chr1g0191711 28.909 550 311 11 11 546 43 526 3.36e-78 258
Msa0136190 MtrunA17_Chr5g0432861 31.791 497 282 8 25 499 22 483 6.37e-78 258
Msa0136190 MtrunA17_Chr2g0332281 38.978 313 154 6 213 506 24 318 3.16e-58 201
Msa0136190 MtrunA17_Chr4g0003891 33.659 410 229 9 207 605 40 417 2.69e-57 199
Msa0136190 MtrunA17_Chr4g0023801 27.815 453 288 13 74 518 52 473 2.54e-39 152
Msa0136190 MtrunA17_Chr4g0037661 26.273 491 313 14 29 493 4 471 3.10e-37 145
Msa0136190 MtrunA17_Chr1g0163311 26.875 480 278 16 41 486 17 457 2.84e-35 140
Msa0136190 MtrunA17_Chr2g0280541 27.907 387 242 12 96 475 3 359 3.12e-28 118
Msa0136190 MtrunA17_Chr1g0206621 38.235 136 82 1 36 169 76 211 2.67e-25 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0136190 AT2G14820.2 61.383 593 208 8 1 584 1 581 0.0 723
Msa0136190 AT2G14820.1 61.383 593 208 8 1 584 1 581 0.0 723
Msa0136190 AT4G37590.1 50.163 612 228 14 1 594 1 553 0.0 551
Msa0136190 AT5G67440.3 49.596 619 244 14 1 608 1 562 0.0 535
Msa0136190 AT5G67440.1 49.596 619 244 14 1 608 1 562 0.0 535
Msa0136190 AT2G23050.1 56.225 498 170 9 1 493 1 455 0.0 523
Msa0136190 AT4G31820.1 49.899 495 222 7 1 492 1 472 4.28e-161 474
Msa0136190 AT5G67440.2 48.007 577 233 13 43 608 5 525 2.43e-160 471
Msa0136190 AT1G67900.5 42.701 548 266 10 1 512 1 536 2.00e-135 410
Msa0136190 AT1G67900.1 42.701 548 266 10 1 512 1 536 2.00e-135 410
Msa0136190 AT1G67900.3 42.701 548 266 10 1 512 1 536 2.00e-135 410
Msa0136190 AT1G67900.6 42.701 548 266 10 1 512 1 536 2.00e-135 410
Msa0136190 AT1G67900.2 42.701 548 266 10 1 512 1 536 2.00e-135 410
Msa0136190 AT1G67900.4 42.701 548 266 10 1 512 1 536 2.00e-135 410
Msa0136190 AT4G31820.2 48.753 441 201 6 55 492 1 419 2.75e-135 405
Msa0136190 AT2G23050.2 52.756 381 138 6 113 493 1 339 1.29e-125 375
Msa0136190 AT5G47800.3 38.833 497 270 8 1 486 1 474 4.10e-120 368
Msa0136190 AT5G47800.1 38.833 497 270 8 1 486 1 474 4.10e-120 368
Msa0136190 AT5G47800.4 38.833 497 270 8 1 486 1 474 4.10e-120 368
Msa0136190 AT3G26490.1 40.230 522 273 9 1 493 1 512 7.52e-120 368
Msa0136190 AT3G26490.3 40.230 522 273 9 1 493 1 512 7.52e-120 368
Msa0136190 AT3G26490.4 40.230 522 273 9 1 493 1 512 7.52e-120 368
Msa0136190 AT5G47800.2 38.833 497 270 8 1 486 114 587 3.09e-118 367
Msa0136190 AT5G03250.1 36.237 574 319 15 1 547 1 554 1.05e-107 337
Msa0136190 AT5G13600.1 37.938 514 280 15 1 492 1 497 3.15e-104 328
Msa0136190 AT1G30440.1 37.739 522 285 12 1 492 1 512 2.11e-103 328
Msa0136190 AT3G26490.2 38.841 466 246 9 1 437 1 456 1.43e-97 308
Msa0136190 AT5G67385.1 37.525 493 276 10 7 488 3 474 4.42e-97 310
Msa0136190 AT3G44820.1 34.297 519 303 9 8 494 5 517 8.32e-94 302
Msa0136190 AT1G03010.1 35.816 564 305 15 18 546 22 563 7.01e-92 297
Msa0136190 AT1G03010.2 36.232 552 299 14 26 546 7 536 1.67e-91 295
Msa0136190 AT1G03010.3 36.151 556 302 14 22 546 29 562 2.84e-91 295
Msa0136190 AT5G48800.1 34.146 533 317 9 23 546 36 543 3.49e-91 295
Msa0136190 AT3G08660.1 36.290 496 268 14 8 496 21 475 7.77e-88 285
Msa0136190 AT5G66560.1 33.333 564 286 14 23 509 14 564 1.50e-87 286
Msa0136190 AT5G10250.2 34.387 506 248 12 23 488 45 506 9.37e-87 283
Msa0136190 AT2G47860.1 33.514 552 311 12 22 546 31 553 1.01e-86 283
Msa0136190 AT5G67385.4 37.778 450 249 9 49 488 1 429 1.91e-86 280
Msa0136190 AT5G67385.5 37.778 450 249 9 49 488 1 429 1.91e-86 280
Msa0136190 AT5G67385.2 37.778 450 249 9 49 488 1 429 1.91e-86 280
Msa0136190 AT5G67385.3 37.778 450 249 9 49 488 1 429 1.91e-86 280
Msa0136190 AT5G66560.3 33.516 546 273 14 41 509 3 535 8.19e-85 278
Msa0136190 AT5G10250.1 34.545 495 247 12 23 488 45 491 1.42e-83 274
Msa0136190 AT5G66560.4 35.443 474 260 12 69 509 65 525 1.49e-82 272
Msa0136190 AT2G30520.1 33.682 478 268 10 25 488 27 469 4.39e-82 270
Msa0136190 AT3G08570.1 34.096 481 281 10 24 488 30 490 5.96e-82 270
Msa0136190 AT2G47860.3 32.174 575 311 13 22 546 31 576 1.50e-81 270
Msa0136190 AT3G49970.1 38.322 441 211 12 41 473 7 394 3.86e-80 263
Msa0136190 AT3G49970.2 38.322 441 211 12 41 473 7 394 3.86e-80 263
Msa0136190 AT3G08660.3 36.866 434 234 12 70 496 15 415 4.98e-77 254
Msa0136190 AT3G50840.1 34.845 485 261 10 23 488 11 459 7.22e-77 255
Msa0136190 AT2G30520.2 33.626 455 253 10 48 488 2 421 9.61e-75 249
Msa0136190 AT2G30520.3 33.626 455 253 10 48 488 2 421 9.61e-75 249
Msa0136190 AT5G03250.2 34.354 457 263 12 113 547 1 442 3.94e-70 235
Msa0136190 AT3G50840.2 34.205 459 247 10 49 488 1 423 1.46e-67 230
Msa0136190 AT3G50840.3 34.205 459 247 10 49 488 1 423 1.46e-67 230
Msa0136190 AT3G08660.2 34.862 436 237 13 8 437 21 415 3.92e-67 226
Msa0136190 AT2G47860.4 33.409 440 242 10 22 437 31 443 4.97e-66 223
Msa0136190 AT5G66560.2 32.359 479 247 13 23 437 14 479 7.90e-64 218
Msa0136190 AT2G47860.6 31.749 463 242 11 22 437 31 466 6.41e-61 210
Msa0136190 AT2G47860.5 32.321 461 259 11 113 546 1 435 1.41e-57 202
Msa0136190 AT2G47860.2 32.321 461 259 11 113 546 1 435 1.41e-57 202
Msa0136190 AT5G64330.2 38.376 271 145 4 7 260 33 298 3.38e-56 202
Msa0136190 AT5G64330.2 42.308 234 118 3 271 488 373 605 1.44e-50 186
Msa0136190 AT5G64330.1 38.376 271 145 4 7 260 33 298 8.82e-56 202
Msa0136190 AT5G64330.1 41.772 237 115 4 271 488 373 605 1.47e-50 187
Msa0136190 AT1G52770.1 36.789 299 153 4 213 493 28 308 2.49e-52 186
Msa0136190 AT5G64330.3 42.308 234 118 3 271 488 314 546 4.66e-51 186
Msa0136190 AT5G64330.3 37.344 241 130 4 38 260 2 239 5.06e-46 172
Msa0136190 AT5G48130.1 26.377 599 375 18 28 608 39 589 4.10e-48 178
Msa0136190 AT3G15570.1 34.899 298 154 4 213 488 29 308 3.76e-47 172
Msa0136190 AT5G17580.2 27.459 488 311 14 11 488 3 457 3.52e-42 160
Msa0136190 AT5G17580.1 27.766 479 295 14 24 488 1 442 1.51e-40 155
Msa0136190 AT3G19850.1 25.688 436 283 9 70 487 52 464 1.35e-38 150
Msa0136190 AT3G03510.1 27.404 416 235 12 80 488 6 361 3.60e-35 139
Msa0136190 AT1G50280.1 25.581 473 300 13 37 482 13 460 3.97e-33 134
Msa0136190 AT1G50280.2 26.027 438 277 12 67 482 15 427 3.31e-32 130
Msa0136190 AT3G22104.1 23.767 446 292 11 37 473 14 420 2.37e-29 122
Msa0136190 AT3G22104.4 22.977 383 245 9 100 473 4 345 7.94e-21 95.9
Msa0136190 AT3G22104.2 22.977 383 245 9 100 473 4 345 7.94e-21 95.9
Msa0136190 AT3G22104.3 22.977 383 245 9 100 473 4 345 7.94e-21 95.9
Msa0136190 AT3G49900.1 31.792 173 97 5 392 547 214 382 2.41e-13 73.2
Msa0136190 AT3G49900.2 31.250 176 97 6 392 547 214 385 1.23e-11 67.8

Find 153 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGAATTCCTCCTATTTC+TGG 0.150173 1_3:-68030425 None:intergenic
GTACCACAACATTGAATTTC+TGG 0.184041 1_3:-68025405 None:intergenic
ATCATACCCTTGCTGAAATT+TGG 0.196113 1_3:-68029175 None:intergenic
TTCTCTCTTCACCCTTCTTC+TGG 0.209501 1_3:+68025557 Msa0136190:five_prime_UTR
CGTCTCATGATGGCCTTTAC+AGG 0.230035 1_3:+68029677 Msa0136190:CDS
GGTGTAGATTTAACTTCTTC+AGG 0.238087 1_3:-68030400 None:intergenic
AAATCCAACAATGGTAAATT+AGG 0.244177 1_3:-68029616 None:intergenic
ATTCAATCTAATGATGTAAT+TGG 0.274781 1_3:+68029118 Msa0136190:CDS
AACATGGATAAGGCTGTTAT+TGG 0.275085 1_3:+68030262 Msa0136190:CDS
TTCGAGTTCTAACTCCATTC+TGG 0.292794 1_3:-68029006 None:intergenic
TTGAGTTACCATCTTCTTAG+AGG 0.298279 1_3:+68026844 Msa0136190:five_prime_UTR
ATTAAAGACACTAATGTATT+AGG 0.298875 1_3:+68025445 Msa0136190:five_prime_UTR
AAGTATATATAGTTTAAAAT+AGG 0.311056 1_3:+68030579 Msa0136190:three_prime_UTR
GTGAGCCAATAGCTACATTT+AGG 0.318718 1_3:-68030449 None:intergenic
TATGTAGGGATGTTTGAATT+AGG 0.319470 1_3:+68026786 Msa0136190:intron
TTGATTCCTTTAGCTATGTC+TGG 0.324835 1_3:-68030067 None:intergenic
TCTTCAACCCACCAGTCTTT+TGG 0.329870 1_3:-68029034 None:intergenic
GGATCCTAATTTACCATTGT+TGG 0.332636 1_3:+68029612 Msa0136190:CDS
TCTGTAAGCATAAGCTTTCA+AGG 0.351574 1_3:-68029146 None:intergenic
AATCTACACCATCCAGAAAT+AGG 0.361267 1_3:+68030413 Msa0136190:CDS
AGTTTCCTAAATGTAGCTAT+TGG 0.366910 1_3:+68030444 Msa0136190:exon
CCATCAGTCTGAAATGTATC+TGG 0.381210 1_3:-68026917 None:intergenic
ATAACAGCCTTATCCATGTT+TGG 0.388738 1_3:-68030259 None:intergenic
GGGGACAGCTGAGGAATTAA+AGG 0.396543 1_3:+68030162 Msa0136190:CDS
ATCATTAGATTGAATTTCCT+TGG 0.398466 1_3:-68029110 None:intergenic
GCACCATCCGTGTCATATTC+CGG 0.403601 1_3:-68030139 None:intergenic
TACCACAACATTGAATTTCT+GGG 0.408567 1_3:-68025404 None:intergenic
GAAGAGTATATGCCAGCTAA+TGG 0.411454 1_3:+68029916 Msa0136190:CDS
TCACAATTCCGAGATTGAAT+TGG 0.413050 1_3:+68029483 Msa0136190:CDS
TGTAGTCTGAAGAAGGATAA+TGG 0.416115 1_3:-68028831 None:intergenic
AAACATCGATCTTGAAAAGA+AGG 0.427976 1_3:-68028772 None:intergenic
GTCAGAACCGCTGCGTCATC+GGG 0.436682 1_3:+68030034 Msa0136190:CDS
GGTCAGAACCGCTGCGTCAT+CGG 0.438094 1_3:+68030033 Msa0136190:CDS
CTGATGGGAACAACAATGTT+AGG 0.441088 1_3:+68026933 Msa0136190:CDS
AAGATGAAGTTTATGAAACT+TGG 0.441776 1_3:+68026887 Msa0136190:exon
GAATCAAAGACCTGAGCATT+GGG 0.443547 1_3:+68030083 Msa0136190:CDS
CAGATATTATTGTCTGCATA+GGG 0.447255 1_3:+68027929 Msa0136190:CDS
AGAAGTCTTTCATTAAGCTA+TGG 0.447436 1_3:+68030311 Msa0136190:CDS
TACAAAGTCTTTGTCACCAT+TGG 0.450362 1_3:+68028850 Msa0136190:CDS
GAAGTCTTTCATTAAGCTAT+GGG 0.452509 1_3:+68030312 Msa0136190:CDS
AATCACATTGTAAGCATTGA+GGG 0.462223 1_3:-68028693 None:intergenic
ATTCAAATTTCAGACATTCC+TGG 0.463677 1_3:+68028617 Msa0136190:CDS
GATGTGCTAGTAAAGAGAAT+TGG 0.464303 1_3:+68029343 Msa0136190:CDS
CTTACAATGTGATTGCTACT+AGG 0.469814 1_3:+68028702 Msa0136190:CDS
GTGTAGATTTAACTTCTTCA+GGG 0.472605 1_3:-68030399 None:intergenic
ACCATTGGATGAGGAGCAAA+AGG 0.477736 1_3:+68028865 Msa0136190:CDS
CTCGAAATGTGCCAAAAGAC+TGG 0.478657 1_3:+68029023 Msa0136190:CDS
TACATTGTAATCTCTCCATC+TGG 0.481738 1_3:-68029412 None:intergenic
GTATAGTACAGAAAATTGTA+AGG 0.482058 1_3:+68029443 Msa0136190:CDS
GTCTTTGTCACCATTGGATG+AGG 0.486439 1_3:+68028856 Msa0136190:CDS
TTTCACCTTTGCTGATACCA+GGG 0.486873 1_3:-68029892 None:intergenic
GTTGGAAACAGTTTCAAAGA+TGG 0.488525 1_3:+68030226 Msa0136190:CDS
TGCTAAACCAAACATGGATA+AGG 0.489081 1_3:+68030252 Msa0136190:CDS
CCAGATACATTTCAGACTGA+TGG 0.490097 1_3:+68026917 Msa0136190:CDS
GAATATGACACGGATGGTGC+GGG 0.491251 1_3:+68030142 Msa0136190:CDS
ATGGTTGCAAAACTCATAGA+TGG 0.492757 1_3:+68029568 Msa0136190:CDS
GCTTTCTGCAATCCATTAGC+TGG 0.493502 1_3:-68029928 None:intergenic
GGCTATTGACACATATTTGA+AGG 0.499410 1_3:+68029699 Msa0136190:CDS
GGAATCAAAGACCTGAGCAT+TGG 0.502284 1_3:+68030082 Msa0136190:CDS
GAGATTGAATTGGTTGGAGG+TGG 0.502864 1_3:+68029493 Msa0136190:CDS
TCAGATTCATCTGAGAGTAT+TGG 0.503452 1_3:+68030367 Msa0136190:CDS
AGTCTGAAATGTATCTGGCT+TGG 0.503488 1_3:-68026912 None:intergenic
AATTCCGAGATTGAATTGGT+TGG 0.507004 1_3:+68029487 Msa0136190:CDS
AGGTGTGCAGCAGAGTATCT+TGG 0.508603 1_3:+68028722 Msa0136190:CDS
TTTGTTGTTGTTGCTTGCAA+AGG 0.510207 1_3:-68025476 None:intergenic
ATGCATGAAAACATTGAGAA+AGG 0.510465 1_3:+68028746 Msa0136190:CDS
TCCGAGATTGAATTGGTTGG+AGG 0.510666 1_3:+68029490 Msa0136190:CDS
GTTGGAGGTGGCGAACTTGA+AGG 0.511286 1_3:+68029505 Msa0136190:CDS
TCCCGACCTTGAGCTACCGT+TGG 0.511760 1_3:-68030107 None:intergenic
ATCAGATGCCTCTAAGCTGA+TGG 0.515822 1_3:+68029549 Msa0136190:CDS
TCAGATATTATTGTCTGCAT+AGG 0.515929 1_3:+68027928 Msa0136190:CDS
AGTTCTAACTCCATTCTGGT+TGG 0.516845 1_3:-68029002 None:intergenic
CATTGAATCTATAGCAAACA+AGG 0.517035 1_3:+68028901 Msa0136190:CDS
CTTTCAGGTAAACCAGAAGA+AGG 0.517351 1_3:-68025569 None:intergenic
ATGTGTCAATAGCCCTGTAA+AGG 0.517885 1_3:-68029690 None:intergenic
AAGTTGTTGCCTTCTGAGAA+AGG 0.525097 1_3:+68029247 Msa0136190:CDS
GGAATTAAAGGCATTAAGAA+AGG 0.526651 1_3:+68030174 Msa0136190:CDS
GGCTTTGAGTCCAACCAGAA+TGG 0.526969 1_3:+68028992 Msa0136190:CDS
TACCGTTGGACCCAATGCTC+AGG 0.527764 1_3:-68030093 None:intergenic
CTTGAAGGGATAAGAAAGCC+GGG 0.528275 1_3:+68029520 Msa0136190:CDS
ATCTCTCGTCCGTCTCATGA+TGG 0.528536 1_3:+68029667 Msa0136190:CDS
AAGGTCGGGAACAACTAATC+CGG 0.530475 1_3:+68030120 Msa0136190:CDS
TCAGCAACTAGAGGAGGCTT+CGG 0.532290 1_3:+68029366 Msa0136190:CDS
TGCTTTGACACATCCTCACA+TGG 0.533200 1_3:-68029199 None:intergenic
TCCAACGGTAGCTCAAGGTC+GGG 0.534974 1_3:+68030106 Msa0136190:CDS
TCTACTTTCCTCTAAGAAGA+TGG 0.536078 1_3:-68026852 None:intergenic
GAGGCATCTGATAAAATCCC+CGG 0.536394 1_3:-68029538 None:intergenic
GGAGGACATGGTGAAAATAG+TGG 0.539111 1_3:+68030343 Msa0136190:CDS
ACCTCCAACCAATTCAATCT+CGG 0.540022 1_3:-68029491 None:intergenic
CAACTCATGTAGTAAAACCT+TGG 0.543822 1_3:+68030618 Msa0136190:three_prime_UTR
GTTAGTTTCTTTATGTCAAG+AGG 0.548023 1_3:+68030516 Msa0136190:three_prime_UTR
CAATCACATTGTAAGCATTG+AGG 0.552608 1_3:-68028694 None:intergenic
TTGAGACAAAGCAACGGAGT+TGG 0.553727 1_3:+68030208 Msa0136190:CDS
ACTTGAAGGGATAAGAAAGC+CGG 0.555989 1_3:+68029519 Msa0136190:CDS
AAGACTTTGTAGTCTGAAGA+AGG 0.556254 1_3:-68028838 None:intergenic
GACCTGAGCATTGGGTCCAA+CGG 0.556700 1_3:+68030091 Msa0136190:CDS
GAAACACTGCCTTTCTCAGA+AGG 0.557771 1_3:-68029256 None:intergenic
TTGGAGGTGGCGAACTTGAA+GGG 0.557828 1_3:+68029506 Msa0136190:CDS
CAGGTATGTTGCAAGTGAGT+TGG 0.560221 1_3:+68027903 Msa0136190:intron
AGAAAGGCAGTGTTTCATGT+AGG 0.562526 1_3:+68029263 Msa0136190:CDS
GTCCAACGGTAGCTCAAGGT+CGG 0.564380 1_3:+68030105 Msa0136190:CDS
AAGCTATGGGCAAGCAAAGG+AGG 0.564447 1_3:+68030325 Msa0136190:CDS
ACCGACACGTGTAATTGTGC+AGG 0.570689 1_3:+68029994 Msa0136190:CDS
GAGATTACAATGTATGATGT+TGG 0.570865 1_3:+68029421 Msa0136190:CDS
GAATTCCTCCTATTTCTGGA+TGG 0.571158 1_3:-68030421 None:intergenic
CAGATACATTTCAGACTGAT+GGG 0.573177 1_3:+68026918 Msa0136190:CDS
GCAGGTACTACATTTCGAGC+AGG 0.578783 1_3:+68030012 Msa0136190:CDS
TCAAAGGCACTTGCACCACC+AGG 0.579140 1_3:-68028635 None:intergenic
TGGAGATGCTAAACCAAACA+TGG 0.581860 1_3:+68030246 Msa0136190:CDS
AGCACTCCAGACATAGCTAA+AGG 0.582825 1_3:+68030061 Msa0136190:CDS
GTCTCATGATGGCCTTTACA+GGG 0.582962 1_3:+68029678 Msa0136190:CDS
TCGATGTGTCTAAAGTTGAC+TGG 0.584614 1_3:+68028930 Msa0136190:CDS
GGAATATGACACGGATGGTG+CGG 0.585843 1_3:+68030141 Msa0136190:CDS
ATCCCAGAAATTCAATGTTG+TGG 0.586970 1_3:+68025402 Msa0136190:five_prime_UTR
TGAGAACTCTTTGATATGAG+AGG 0.591088 1_3:-68028548 None:intergenic
AAGTTGCCAAATTTCAGCAA+GGG 0.593702 1_3:+68029169 Msa0136190:CDS
TTGGGTCCAACGGTAGCTCA+AGG 0.599883 1_3:+68030101 Msa0136190:CDS
TTGCTATAGATTCAATGCAA+CGG 0.601629 1_3:-68028895 None:intergenic
AAAGTTGCCAAATTTCAGCA+AGG 0.602734 1_3:+68029168 Msa0136190:CDS
ACAACATTGAATTTCTGGGA+TGG 0.605848 1_3:-68025400 None:intergenic
GAAATGTGCCAAAAGACTGG+TGG 0.606762 1_3:+68029026 Msa0136190:CDS
GGATGGTGCGGGGACAGCTG+AGG 0.606898 1_3:+68030153 Msa0136190:CDS
TGGGCAAGCAAAGGAGGACA+TGG 0.607253 1_3:+68030331 Msa0136190:CDS
GAGAATTGGTCAGCAACTAG+AGG 0.607732 1_3:+68029357 Msa0136190:CDS
ATTAAGCTATGGGCAAGCAA+AGG 0.609202 1_3:+68030322 Msa0136190:CDS
AAACTTAGCACATATCTCAA+AGG 0.610871 1_3:-68028651 None:intergenic
CTACACCATCCAGAAATAGG+AGG 0.614194 1_3:+68030416 Msa0136190:CDS
GTGAGGATGTGTCAAAGCAT+CGG 0.618211 1_3:+68029203 Msa0136190:CDS
CAAGAGGACCTCAAAACTAG+TGG 0.618887 1_3:+68030532 Msa0136190:three_prime_UTR
ACCTGCACAATTACACGTGT+CGG 0.621274 1_3:-68029995 None:intergenic
TATAGTACAGAAAATTGTAA+GGG 0.624280 1_3:+68029444 Msa0136190:CDS
ATACCTTGTTGAAATTGCGA+AGG 0.627461 1_3:+68029591 Msa0136190:CDS
CTGTAAAGGCCATCATGAGA+CGG 0.630996 1_3:-68029676 None:intergenic
AATTGGTCAGCAACTAGAGG+AGG 0.631005 1_3:+68029360 Msa0136190:CDS
GTAAAGATCTTACACAAACA+TGG 0.636568 1_3:-68025647 None:intergenic
TTTCAGGTAAACCAGAAGAA+GGG 0.641130 1_3:-68025568 None:intergenic
AACTAATCCGGAATATGACA+CGG 0.643937 1_3:+68030132 Msa0136190:CDS
TGCATGCAGTGCAAAACGAG+AGG 0.647697 1_3:+68029969 Msa0136190:CDS
GATCCTTCGCAATTTCAACA+AGG 0.647912 1_3:-68029594 None:intergenic
CAAATTTCAGACATTCCTGG+TGG 0.649529 1_3:+68028620 Msa0136190:CDS
AATCCGGAATATGACACGGA+TGG 0.653678 1_3:+68030136 Msa0136190:CDS
GAGCACCCTGGTATCAGCAA+AGG 0.656688 1_3:+68029887 Msa0136190:CDS
TATAACAAATATCAAAACCA+AGG 0.664477 1_3:+68029093 Msa0136190:CDS
AAATGTGCCAAAAGACTGGT+GGG 0.670247 1_3:+68029027 Msa0136190:CDS
AGATATTATTGTCTGCATAG+GGG 0.671630 1_3:+68027930 Msa0136190:CDS
CAAGGGTATGATCCCATGTG+AGG 0.680645 1_3:+68029186 Msa0136190:CDS
GAAACACTACAGGAGCACCC+TGG 0.682303 1_3:+68029875 Msa0136190:intron
AATATGACACGGATGGTGCG+GGG 0.682586 1_3:+68030143 Msa0136190:CDS
AGATTAACAAAATCCAACAA+TGG 0.687270 1_3:-68029625 None:intergenic
GCTAGTACCCGATGACGCAG+CGG 0.707239 1_3:-68030041 None:intergenic
TTGAAGGGATAAGAAAGCCG+GGG 0.713574 1_3:+68029521 Msa0136190:CDS
GCTTTGACACATCCTCACAT+GGG 0.720284 1_3:-68029198 None:intergenic
GCGTCGTTGAGACAAAGCAA+CGG 0.727282 1_3:+68030202 Msa0136190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATGCAAATTTTTTATATT+AGG - chr1_3:68027082-68027101 None:intergenic 10.0%
!!! AAATTGCTATTAAATTTATT+AGG - chr1_3:68028004-68028023 None:intergenic 10.0%
!!! AAACAATTAGTTTATTTATT+AGG - chr1_3:68028232-68028251 None:intergenic 10.0%
!!! AAGTATATATAGTTTAAAAT+AGG + chr1_3:68030579-68030598 Msa0136190:three_prime_UTR 10.0%
!! AAATCTAGTAAAATAATGTT+AGG - chr1_3:68025961-68025980 None:intergenic 15.0%
!!! TTAAATACTGAAAAGTATAA+CGG - chr1_3:68026655-68026674 None:intergenic 15.0%
!!! ATTTTTTATATTAGGAACAA+AGG - chr1_3:68027074-68027093 None:intergenic 15.0%
!! AAATATTAAAAGAAACTGTT+GGG - chr1_3:68027121-68027140 None:intergenic 15.0%
!!! TTTTAATATTTCTTCACTAT+TGG + chr1_3:68027130-68027149 Msa0136190:intron 15.0%
!!! ATTTTTAGTGATTAAGAAAA+TGG + chr1_3:68027231-68027250 Msa0136190:intron 15.0%
!!! TATTAGGATTTTTTTTCATT+GGG - chr1_3:68028216-68028235 None:intergenic 15.0%
!!! TTATTAGGATTTTTTTTCAT+TGG - chr1_3:68028217-68028236 None:intergenic 15.0%
!! AAACTACAAATAAAAAGATT+TGG - chr1_3:68028528-68028547 None:intergenic 15.0%
!! ATTAAAGACACTAATGTATT+AGG + chr1_3:68025445-68025464 Msa0136190:five_prime_UTR 20.0%
!!! TAATAAAGTTTTAAGCTTTC+AGG - chr1_3:68025587-68025606 None:intergenic 20.0%
!! TAAGATCTTTACTTTCTTAA+TGG + chr1_3:68025658-68025677 Msa0136190:intron 20.0%
!!! TTTTGTTTTTCTCTTAGTAA+TGG + chr1_3:68025700-68025719 Msa0136190:intron 20.0%
!! TTTCATCTCTAAATTTGAAA+AGG + chr1_3:68025726-68025745 Msa0136190:intron 20.0%
!! TTCATCTCTAAATTTGAAAA+GGG + chr1_3:68025727-68025746 Msa0136190:intron 20.0%
!!! TTTTTAAACAATGACTCAAA+CGG + chr1_3:68025770-68025789 Msa0136190:intron 20.0%
!!! TTTTTTATATTGTGATGAGT+TGG + chr1_3:68025806-68025825 Msa0136190:intron 20.0%
!!! TTTTTATATTGTGATGAGTT+GGG + chr1_3:68025807-68025826 Msa0136190:intron 20.0%
!! TAAAGAAATAAAGAAAAGTG+AGG + chr1_3:68026381-68026400 Msa0136190:intron 20.0%
!! TATAAAACATATCCCAAAAA+AGG - chr1_3:68026768-68026787 None:intergenic 20.0%
!! GAAATATTAAAAGAAACTGT+TGG - chr1_3:68027122-68027141 None:intergenic 20.0%
!! ACAAAATTAATCTTTCTGAA+AGG + chr1_3:68027300-68027319 Msa0136190:intron 20.0%
!! GTCTAATTGAAAAGTAATAA+TGG - chr1_3:68027695-68027714 None:intergenic 20.0%
!! AATCTTCTATATTTGAAAAG+GGG - chr1_3:68027727-68027746 None:intergenic 20.0%
!! CAATCTTCTATATTTGAAAA+GGG - chr1_3:68027728-68027747 None:intergenic 20.0%
!!! CTTTTCAAATATAGAAGATT+GGG + chr1_3:68027727-68027746 Msa0136190:intron 20.0%
!! CTATTAAATTTATTAGGCAT+TGG - chr1_3:68027998-68028017 None:intergenic 20.0%
!!! AAATTTCATTCCTTTTATTG+TGG - chr1_3:68028082-68028101 None:intergenic 20.0%
!! AAAAATACTTGAAATCCAAA+AGG - chr1_3:68028122-68028141 None:intergenic 20.0%
!!! TTTAAATTGGGTTAGATTTA+TGG + chr1_3:68028376-68028395 Msa0136190:intron 20.0%
!! TATAACAAATATCAAAACCA+AGG + chr1_3:68029093-68029112 Msa0136190:CDS 20.0%
!! ATTCAATCTAATGATGTAAT+TGG + chr1_3:68029118-68029137 Msa0136190:CDS 20.0%
!! TATAGTACAGAAAATTGTAA+GGG + chr1_3:68029444-68029463 Msa0136190:CDS 20.0%
!! TCTCTATACTGAATTTAAAA+TGG - chr1_3:68029764-68029783 None:intergenic 20.0%
!!! TTTCCTTTCTTTCTTTTTTT+GGG + chr1_3:68030494-68030513 Msa0136190:three_prime_UTR 20.0%
!!! ACTGTTTTGTTTTTTGTGTA+TGG + chr1_3:68025521-68025540 Msa0136190:five_prime_UTR 25.0%
!!! AAGGGTATGTGTATTTTTTT+AGG + chr1_3:68025745-68025764 Msa0136190:intron 25.0%
!! TTTTAAACAATGACTCAAAC+GGG + chr1_3:68025771-68025790 Msa0136190:intron 25.0%
! GATCATAACTTTATACTATG+TGG - chr1_3:68025935-68025954 None:intergenic 25.0%
!!! GATTTTTGTTTGTTACATTC+TGG + chr1_3:68025976-68025995 Msa0136190:intron 25.0%
! TTGTTCATTTATTCCATACT+TGG + chr1_3:68026090-68026109 Msa0136190:intron 25.0%
! ATAGATAGATATACACATGT+TGG + chr1_3:68026266-68026285 Msa0136190:intron 25.0%
! AGAACCTTTGCTTAAAAAAT+TGG + chr1_3:68026555-68026574 Msa0136190:intron 25.0%
! GAACCTTTGCTTAAAAAATT+GGG + chr1_3:68026556-68026575 Msa0136190:intron 25.0%
!!! TATCCCAATTTTTTAAGCAA+AGG - chr1_3:68026562-68026581 None:intergenic 25.0%
! CAGAAGGTTATTATAAAAGA+TGG - chr1_3:68026612-68026631 None:intergenic 25.0%
! GAGAAAAGAAAAGTTTCTAA+AGG - chr1_3:68026686-68026705 None:intergenic 25.0%
! AAATGTATATCCAAGTTTCT+TGG - chr1_3:68026717-68026736 None:intergenic 25.0%
!! TTGGGATATGTTTTATATGT+AGG + chr1_3:68026771-68026790 Msa0136190:intron 25.0%
!! TGGGATATGTTTTATATGTA+GGG + chr1_3:68026772-68026791 Msa0136190:intron 25.0%
! AAGATGAAGTTTATGAAACT+TGG + chr1_3:68026887-68026906 Msa0136190:exon 25.0%
!! TTTATGCAATGCAATCTTTT+AGG + chr1_3:68027206-68027225 Msa0136190:intron 25.0%
! ATAATGCTTGATCTAAATGA+AGG + chr1_3:68027350-68027369 Msa0136190:intron 25.0%
!!! AACAGTAATTTAAGCATTGA+AGG - chr1_3:68027514-68027533 None:intergenic 25.0%
! CCAATCTTCTATATTTGAAA+AGG - chr1_3:68027729-68027748 None:intergenic 25.0%
!! CCTTTTCAAATATAGAAGAT+TGG + chr1_3:68027726-68027745 Msa0136190:intron 25.0%
! GAACAAACTATCTAAAAAGA+GGG - chr1_3:68027862-68027881 None:intergenic 25.0%
! AGAACAAACTATCTAAAAAG+AGG - chr1_3:68027863-68027882 None:intergenic 25.0%
!! TACAAAGTTTTACTTACACA+AGG + chr1_3:68027954-68027973 Msa0136190:CDS 25.0%
!! ATTTATCATCTTTTGCCTTT+TGG + chr1_3:68028104-68028123 Msa0136190:intron 25.0%
! TTGTCAAAATCTCAACTAAA+TGG + chr1_3:68028332-68028351 Msa0136190:intron 25.0%
! TGTCAAAATCTCAACTAAAT+GGG + chr1_3:68028333-68028352 Msa0136190:intron 25.0%
!! TGACAATGAATTTCAAGTAA+TGG - chr1_3:68028420-68028439 None:intergenic 25.0%
! ATTACTTGAAATTCATTGTC+AGG + chr1_3:68028419-68028438 Msa0136190:intron 25.0%
!! GATGTTTTCTTCATTATTGA+GGG - chr1_3:68028591-68028610 None:intergenic 25.0%
! ATCATTAGATTGAATTTCCT+TGG - chr1_3:68029113-68029132 None:intergenic 25.0%
! GTATAGTACAGAAAATTGTA+AGG + chr1_3:68029443-68029462 Msa0136190:CDS 25.0%
! AAATCCAACAATGGTAAATT+AGG - chr1_3:68029619-68029638 None:intergenic 25.0%
! AGATTAACAAAATCCAACAA+TGG - chr1_3:68029628-68029647 None:intergenic 25.0%
!!! TTCAAAGCATTTTAGTGTAA+CGG - chr1_3:68029858-68029877 None:intergenic 25.0%
! CTGTTATTGGAAAAATGAAA+GGG + chr1_3:68030275-68030294 Msa0136190:CDS 25.0%
!!! GTTTCCTTTCTTTCTTTTTT+TGG + chr1_3:68030493-68030512 Msa0136190:three_prime_UTR 25.0%
! TAACCCAAAAAAAGAAAGAA+AGG - chr1_3:68030500-68030519 None:intergenic 25.0%
TACCACAACATTGAATTTCT+GGG - chr1_3:68025407-68025426 None:intergenic 30.0%
GTAAAGATCTTACACAAACA+TGG - chr1_3:68025650-68025669 None:intergenic 30.0%
TTGGGAAAAAAATTGAGTCT+TGG + chr1_3:68025825-68025844 Msa0136190:intron 30.0%
TGGGAAAAAAATTGAGTCTT+GGG + chr1_3:68025826-68025845 Msa0136190:intron 30.0%
! AGCATATTTTTCTACATGTG+TGG + chr1_3:68025895-68025914 Msa0136190:intron 30.0%
!! TTTTGTTTGTTACATTCTGG+TGG + chr1_3:68025979-68025998 Msa0136190:intron 30.0%
!! ATTCTTGTTGTCTACAGTTT+TGG + chr1_3:68026119-68026138 Msa0136190:intron 30.0%
AGATATACACATGTTGGATT+TGG + chr1_3:68026272-68026291 Msa0136190:intron 30.0%
!! CTTGAAGCTTTTAAAAGTGT+TGG + chr1_3:68026297-68026316 Msa0136190:intron 30.0%
!!! TTTTAAAAGTGTTGGTGGTA+TGG + chr1_3:68026305-68026324 Msa0136190:intron 30.0%
AGAAATAAAGAAAAGTGAGG+TGG + chr1_3:68026384-68026403 Msa0136190:intron 30.0%
TAAGCAAAGGTTCTCTTAAA+TGG - chr1_3:68026549-68026568 None:intergenic 30.0%
AAAGATAAGTGGTCTAGATT+GGG - chr1_3:68026587-68026606 None:intergenic 30.0%
AAAAGATGGAGAAAGATAAG+TGG - chr1_3:68026598-68026617 None:intergenic 30.0%
! AAAAGTTTCTAAAGGCAACA+AGG - chr1_3:68026678-68026697 None:intergenic 30.0%
ATATACATTTCAGTGTTAGC+TGG + chr1_3:68026727-68026746 Msa0136190:intron 30.0%
!!! TTGTCTTCTCATTCCTTTTT+TGG + chr1_3:68026752-68026771 Msa0136190:intron 30.0%
!!! TGTCTTCTCATTCCTTTTTT+GGG + chr1_3:68026753-68026772 Msa0136190:intron 30.0%
TATGTAGGGATGTTTGAATT+AGG + chr1_3:68026786-68026805 Msa0136190:intron 30.0%
!!! TTCCTACTAGTTTTGATTTC+CGG + chr1_3:68027175-68027194 Msa0136190:intron 30.0%
CATTGCATAAAGTAGAAAAC+CGG - chr1_3:68027197-68027216 None:intergenic 30.0%
CAAAAAAAGGAAGACGAAAA+AGG - chr1_3:68027270-68027289 None:intergenic 30.0%
!! CTTTTTCGTCTTCCTTTTTT+TGG + chr1_3:68027268-68027287 Msa0136190:intron 30.0%
ATAGTCATGAAGAACATAGA+AGG - chr1_3:68027332-68027351 None:intergenic 30.0%
AGATTAATGCTGAGAAATGT+AGG + chr1_3:68027379-68027398 Msa0136190:intron 30.0%
!! AAGCATTGAAGGAAAATTGA+TGG - chr1_3:68027503-68027522 None:intergenic 30.0%
GTTGTTAAGTTCTTTCACAT+CGG - chr1_3:68027611-68027630 None:intergenic 30.0%
!! TTCTTTGAAGCTGTCTTTAT+TGG + chr1_3:68027646-68027665 Msa0136190:intron 30.0%
TCAGATATTATTGTCTGCAT+AGG + chr1_3:68027928-68027947 Msa0136190:CDS 30.0%
CAGATATTATTGTCTGCATA+GGG + chr1_3:68027929-68027948 Msa0136190:CDS 30.0%
AGATATTATTGTCTGCATAG+GGG + chr1_3:68027930-68027949 Msa0136190:CDS 30.0%
!! ATTTATTAGGCATTGGTAGA+AGG - chr1_3:68027991-68028010 None:intergenic 30.0%
TAGCAATTTGTGCAAAGTTA+CGG + chr1_3:68028015-68028034 Msa0136190:intron 30.0%
! TTCCTTTTATTGTGGTGTAA+GGG - chr1_3:68028074-68028093 None:intergenic 30.0%
! ATTCCTTTTATTGTGGTGTA+AGG - chr1_3:68028075-68028094 None:intergenic 30.0%
! ATTGGGATTTTATCATCACA+TGG - chr1_3:68028199-68028218 None:intergenic 30.0%
CATAATGCATGACCTTATTA+AGG + chr1_3:68028277-68028296 Msa0136190:intron 30.0%
ACCTTATTAAGGATCAGAAA+TGG + chr1_3:68028288-68028307 Msa0136190:intron 30.0%
TCCATTTCTGATCCTTAATA+AGG - chr1_3:68028292-68028311 None:intergenic 30.0%
ATTAAGGATCAGAAATGGAA+AGG + chr1_3:68028293-68028312 Msa0136190:intron 30.0%
!! TAGTTGAGATTTTGACAACT+AGG - chr1_3:68028330-68028349 None:intergenic 30.0%
GGTTAGATTTATGGAAAATC+TGG + chr1_3:68028385-68028404 Msa0136190:intron 30.0%
GATTTATGGAAAATCTGGTT+TGG + chr1_3:68028390-68028409 Msa0136190:intron 30.0%
TTGAAATTCATTGTCAGGTT+GGG + chr1_3:68028424-68028443 Msa0136190:intron 30.0%
! CGATGTTTTCTTCATTATTG+AGG - chr1_3:68028592-68028611 None:intergenic 30.0%
ATTCAAATTTCAGACATTCC+TGG + chr1_3:68028617-68028636 Msa0136190:CDS 30.0%
AAACTTAGCACATATCTCAA+AGG - chr1_3:68028654-68028673 None:intergenic 30.0%
! ATATGTGCTAAGTTTTGCTA+CGG + chr1_3:68028659-68028678 Msa0136190:CDS 30.0%
!! AATCACATTGTAAGCATTGA+GGG - chr1_3:68028696-68028715 None:intergenic 30.0%
ATGCATGAAAACATTGAGAA+AGG + chr1_3:68028746-68028765 Msa0136190:CDS 30.0%
AAACATCGATCTTGAAAAGA+AGG - chr1_3:68028775-68028794 None:intergenic 30.0%
TTGCTATAGATTCAATGCAA+CGG - chr1_3:68028898-68028917 None:intergenic 30.0%
CATTGAATCTATAGCAAACA+AGG + chr1_3:68028901-68028920 Msa0136190:CDS 30.0%
ATATAACCGAAAAAAGCTTC+CGG + chr1_3:68028961-68028980 Msa0136190:CDS 30.0%
!!! ATTTTGATTAAAGCACCAGA+TGG + chr1_3:68029397-68029416 Msa0136190:CDS 30.0%
GAGATTACAATGTATGATGT+TGG + chr1_3:68029421-68029440 Msa0136190:CDS 30.0%
AACATACTAAGACACAACAA+TGG - chr1_3:68029795-68029814 None:intergenic 30.0%
!! AAAATGCTTTGAAACACTAC+AGG + chr1_3:68029865-68029884 Msa0136190:intron 30.0%
!! GGAATTAAAGGCATTAAGAA+AGG + chr1_3:68030174-68030193 Msa0136190:CDS 30.0%
GCTGTTATTGGAAAAATGAA+AGG + chr1_3:68030274-68030293 Msa0136190:CDS 30.0%
AGAAGTCTTTCATTAAGCTA+TGG + chr1_3:68030311-68030330 Msa0136190:CDS 30.0%
GAAGTCTTTCATTAAGCTAT+GGG + chr1_3:68030312-68030331 Msa0136190:CDS 30.0%
! GTGTAGATTTAACTTCTTCA+GGG - chr1_3:68030402-68030421 None:intergenic 30.0%
AGTTTCCTAAATGTAGCTAT+TGG + chr1_3:68030444-68030463 Msa0136190:exon 30.0%
! GTTAGTTTCTTTATGTCAAG+AGG + chr1_3:68030516-68030535 Msa0136190:three_prime_UTR 30.0%
! ACAACATTGAATTTCTGGGA+TGG - chr1_3:68025403-68025422 None:intergenic 35.0%
ATCCCAGAAATTCAATGTTG+TGG + chr1_3:68025402-68025421 Msa0136190:five_prime_UTR 35.0%
GTACCACAACATTGAATTTC+TGG - chr1_3:68025408-68025427 None:intergenic 35.0%
!! TTTGTTGTTGTTGCTTGCAA+AGG - chr1_3:68025479-68025498 None:intergenic 35.0%
! TTTCAGGTAAACCAGAAGAA+GGG - chr1_3:68025571-68025590 None:intergenic 35.0%
GAAAAAAATTGAGTCTTGGG+TGG + chr1_3:68025829-68025848 Msa0136190:intron 35.0%
! TTTACACGGAGAGTGATTTT+GGG + chr1_3:68025860-68025879 Msa0136190:intron 35.0%
! CAAGAATCTTTTGCCAAGTA+TGG - chr1_3:68026106-68026125 None:intergenic 35.0%
! TGCAGGTTTTCAAACTTCAA+CGG + chr1_3:68026180-68026199 Msa0136190:intron 35.0%
!!! GAAGCTTTTAAAAGTGTTGG+TGG + chr1_3:68026300-68026319 Msa0136190:intron 35.0%
ACAGTGTAATCAGATAGTGA+AGG + chr1_3:68026357-68026376 Msa0136190:intron 35.0%
GTTTAGTGTTAGTACTCTGT+TGG + chr1_3:68026437-68026456 Msa0136190:intron 35.0%
CTAACAAGAGATTGTTTCCT+TGG - chr1_3:68026517-68026536 None:intergenic 35.0%
GAAAGATAAGTGGTCTAGAT+TGG - chr1_3:68026588-68026607 None:intergenic 35.0%
TCTCTTAAAGCCAAGAAACT+TGG + chr1_3:68026704-68026723 Msa0136190:intron 35.0%
TTGAGTTACCATCTTCTTAG+AGG + chr1_3:68026844-68026863 Msa0136190:five_prime_UTR 35.0%
! TCTACTTTCCTCTAAGAAGA+TGG - chr1_3:68026855-68026874 None:intergenic 35.0%
CAGATACATTTCAGACTGAT+GGG + chr1_3:68026918-68026937 Msa0136190:CDS 35.0%
AACCGGAAATCAAAACTAGT+AGG - chr1_3:68027180-68027199 None:intergenic 35.0%
!!! TTCGTCTTCCTTTTTTTGGT+TGG + chr1_3:68027272-68027291 Msa0136190:intron 35.0%
AAAAGAGTAGAACCCTAGAA+TGG - chr1_3:68027812-68027831 None:intergenic 35.0%
TTCCCTTACACCACAATAAA+AGG + chr1_3:68028069-68028088 Msa0136190:intron 35.0%
ACGTGCAGTGAGTTTAAATT+GGG + chr1_3:68028364-68028383 Msa0136190:intron 35.0%
CTTGAAATTCATTGTCAGGT+TGG + chr1_3:68028423-68028442 Msa0136190:intron 35.0%
TGAGAACTCTTTGATATGAG+AGG - chr1_3:68028551-68028570 None:intergenic 35.0%
! CAATCACATTGTAAGCATTG+AGG - chr1_3:68028697-68028716 None:intergenic 35.0%
CTTACAATGTGATTGCTACT+AGG + chr1_3:68028702-68028721 Msa0136190:CDS 35.0%
TACGAAAAATGCTAGAGCTT+AGG - chr1_3:68028799-68028818 None:intergenic 35.0%
! TAGCATTTTTCGTAGTTGGA+AGG + chr1_3:68028805-68028824 Msa0136190:CDS 35.0%
TGTAGTCTGAAGAAGGATAA+TGG - chr1_3:68028834-68028853 None:intergenic 35.0%
!!! TTTCTTCCGGAAGCTTTTTT+CGG - chr1_3:68028970-68028989 None:intergenic 35.0%
AAAAAGCTTCCGGAAGAAAA+TGG + chr1_3:68028971-68028990 Msa0136190:CDS 35.0%
TCTGTAAGCATAAGCTTTCA+AGG - chr1_3:68029149-68029168 None:intergenic 35.0%
AAAGTTGCCAAATTTCAGCA+AGG + chr1_3:68029168-68029187 Msa0136190:CDS 35.0%
AAGTTGCCAAATTTCAGCAA+GGG + chr1_3:68029169-68029188 Msa0136190:CDS 35.0%
ATCATACCCTTGCTGAAATT+TGG - chr1_3:68029178-68029197 None:intergenic 35.0%
GATGTGCTAGTAAAGAGAAT+TGG + chr1_3:68029343-68029362 Msa0136190:CDS 35.0%
TACATTGTAATCTCTCCATC+TGG - chr1_3:68029415-68029434 None:intergenic 35.0%
TCACAATTCCGAGATTGAAT+TGG + chr1_3:68029483-68029502 Msa0136190:CDS 35.0%
AATTCCGAGATTGAATTGGT+TGG + chr1_3:68029487-68029506 Msa0136190:CDS 35.0%
ATGGTTGCAAAACTCATAGA+TGG + chr1_3:68029568-68029587 Msa0136190:CDS 35.0%
ATACCTTGTTGAAATTGCGA+AGG + chr1_3:68029591-68029610 Msa0136190:CDS 35.0%
GGATCCTAATTTACCATTGT+TGG + chr1_3:68029612-68029631 Msa0136190:CDS 35.0%
GGCTATTGACACATATTTGA+AGG + chr1_3:68029699-68029718 Msa0136190:CDS 35.0%
TTGATTCCTTTAGCTATGTC+TGG - chr1_3:68030070-68030089 None:intergenic 35.0%
AACTAATCCGGAATATGACA+CGG + chr1_3:68030132-68030151 Msa0136190:CDS 35.0%
GTTGGAAACAGTTTCAAAGA+TGG + chr1_3:68030226-68030245 Msa0136190:CDS 35.0%
TGCTAAACCAAACATGGATA+AGG + chr1_3:68030252-68030271 Msa0136190:CDS 35.0%
! ATAACAGCCTTATCCATGTT+TGG - chr1_3:68030262-68030281 None:intergenic 35.0%
AACATGGATAAGGCTGTTAT+TGG + chr1_3:68030262-68030281 Msa0136190:CDS 35.0%
! TCAGATTCATCTGAGAGTAT+TGG + chr1_3:68030367-68030386 Msa0136190:CDS 35.0%
! GGTGTAGATTTAACTTCTTC+AGG - chr1_3:68030403-68030422 None:intergenic 35.0%
AATCTACACCATCCAGAAAT+AGG + chr1_3:68030413-68030432 Msa0136190:CDS 35.0%
AACTGAATTCCTCCTATTTC+TGG - chr1_3:68030428-68030447 None:intergenic 35.0%
!!! GAGATAAACCACTAGTTTTG+AGG - chr1_3:68030543-68030562 None:intergenic 35.0%
! CTTTCAGGTAAACCAGAAGA+AGG - chr1_3:68025572-68025591 None:intergenic 40.0%
! GTTTACACGGAGAGTGATTT+TGG + chr1_3:68025859-68025878 Msa0136190:intron 40.0%
!! CTTGTTGTCTACAGTTTTGG+TGG + chr1_3:68026122-68026141 Msa0136190:intron 40.0%
TGCAACTGAAAACAGCATCT+TGG - chr1_3:68026164-68026183 None:intergenic 40.0%
!!! AAGATGCTGTTTTCAGTTGC+AGG + chr1_3:68026163-68026182 Msa0136190:intron 40.0%
CAAGAGATTGTTTCCTTGGT+CGG - chr1_3:68026513-68026532 None:intergenic 40.0%
! AGTCTGAAATGTATCTGGCT+TGG - chr1_3:68026915-68026934 None:intergenic 40.0%
! CCATCAGTCTGAAATGTATC+TGG - chr1_3:68026920-68026939 None:intergenic 40.0%
CCAGATACATTTCAGACTGA+TGG + chr1_3:68026917-68026936 Msa0136190:CDS 40.0%
CTGATGGGAACAACAATGTT+AGG + chr1_3:68026933-68026952 Msa0136190:CDS 40.0%
TGTCATCGCCAACCAAAAAA+AGG - chr1_3:68027283-68027302 None:intergenic 40.0%
GTCATGAAGAACATAGAAGG+CGG - chr1_3:68027329-68027348 None:intergenic 40.0%
TTATTGTTGCTGACCTGACT+AGG + chr1_3:68027422-68027441 Msa0136190:intron 40.0%
TGAATGTTCAAGTCCTAGTC+AGG - chr1_3:68027438-68027457 None:intergenic 40.0%
TTGATCTAGCCACCATTCTA+GGG + chr1_3:68027797-68027816 Msa0136190:intron 40.0%
CACGTGCAGTGAGTTTAAAT+TGG + chr1_3:68028363-68028382 Msa0136190:intron 40.0%
CAAATTTCAGACATTCCTGG+TGG + chr1_3:68028620-68028639 Msa0136190:CDS 40.0%
! GCTCTAGCATTTTTCGTAGT+TGG + chr1_3:68028801-68028820 Msa0136190:CDS 40.0%
! TCGATGTGTCTAAAGTTGAC+TGG + chr1_3:68028930-68028949 Msa0136190:CDS 40.0%
!! GACTCAAAGCCATTTTCTTC+CGG - chr1_3:68028983-68029002 None:intergenic 40.0%
! AGTTCTAACTCCATTCTGGT+TGG - chr1_3:68029005-68029024 None:intergenic 40.0%
! TTCGAGTTCTAACTCCATTC+TGG - chr1_3:68029009-68029028 None:intergenic 40.0%
AAATGTGCCAAAAGACTGGT+GGG + chr1_3:68029027-68029046 Msa0136190:CDS 40.0%
! AAGTTGTTGCCTTCTGAGAA+AGG + chr1_3:68029247-68029266 Msa0136190:CDS 40.0%
AGAAAGGCAGTGTTTCATGT+AGG + chr1_3:68029263-68029282 Msa0136190:CDS 40.0%
ACCTCCAACCAATTCAATCT+CGG - chr1_3:68029494-68029513 None:intergenic 40.0%
ACTTGAAGGGATAAGAAAGC+CGG + chr1_3:68029519-68029538 Msa0136190:CDS 40.0%
! TTTTGCAACCATCAGCTTAG+AGG - chr1_3:68029560-68029579 None:intergenic 40.0%
GATCCTTCGCAATTTCAACA+AGG - chr1_3:68029597-68029616 None:intergenic 40.0%
ATGTGTCAATAGCCCTGTAA+AGG - chr1_3:68029693-68029712 None:intergenic 40.0%
TTTCACCTTTGCTGATACCA+GGG - chr1_3:68029895-68029914 None:intergenic 40.0%
! TTTTCACCTTTGCTGATACC+AGG - chr1_3:68029896-68029915 None:intergenic 40.0%
! GAAGAGTATATGCCAGCTAA+TGG + chr1_3:68029916-68029935 Msa0136190:CDS 40.0%
GAATCAAAGACCTGAGCATT+GGG + chr1_3:68030083-68030102 Msa0136190:CDS 40.0%
TGGAGATGCTAAACCAAACA+TGG + chr1_3:68030246-68030265 Msa0136190:CDS 40.0%
ATTAAGCTATGGGCAAGCAA+AGG + chr1_3:68030322-68030341 Msa0136190:CDS 40.0%
!! GAATTCCTCCTATTTCTGGA+TGG - chr1_3:68030424-68030443 None:intergenic 40.0%
GTGAGCCAATAGCTACATTT+AGG - chr1_3:68030452-68030471 None:intergenic 40.0%
TTCTCTCTTCACCCTTCTTC+TGG + chr1_3:68025557-68025576 Msa0136190:five_prime_UTR 45.0%
AATTGAGTCTTGGGTGGTGT+TGG + chr1_3:68025835-68025854 Msa0136190:intron 45.0%
TGGAGTCAGATTTGTGTCTC+TGG + chr1_3:68026404-68026423 Msa0136190:intron 45.0%
TTGACAGCAAACAAGGCAGA+AGG - chr1_3:68026628-68026647 None:intergenic 45.0%
CGGAATCTTGACAGCAAACA+AGG - chr1_3:68026635-68026654 None:intergenic 45.0%
CTTGATCTAGCCACCATTCT+AGG + chr1_3:68027796-68027815 Msa0136190:intron 45.0%
AGAGTAGAACCCTAGAATGG+TGG - chr1_3:68027809-68027828 None:intergenic 45.0%
CAGGTATGTTGCAAGTGAGT+TGG + chr1_3:68027903-68027922 Msa0136190:intron 45.0%
! TGGCTTTTCAGCACAGGTTA+AGG - chr1_3:68028179-68028198 None:intergenic 45.0%
! ATCACATGGCTTTTCAGCAC+AGG - chr1_3:68028185-68028204 None:intergenic 45.0%
ACCATTGGATGAGGAGCAAA+AGG + chr1_3:68028865-68028884 Msa0136190:CDS 45.0%
! ACCTTTTGCTCCTCATCCAA+TGG - chr1_3:68028869-68028888 None:intergenic 45.0%
CTCGAAATGTGCCAAAAGAC+TGG + chr1_3:68029023-68029042 Msa0136190:CDS 45.0%
GAAATGTGCCAAAAGACTGG+TGG + chr1_3:68029026-68029045 Msa0136190:CDS 45.0%
! TCTTCAACCCACCAGTCTTT+TGG - chr1_3:68029037-68029056 None:intergenic 45.0%
GCTTTGACACATCCTCACAT+GGG - chr1_3:68029201-68029220 None:intergenic 45.0%
TGCTTTGACACATCCTCACA+TGG - chr1_3:68029202-68029221 None:intergenic 45.0%
GTGAGGATGTGTCAAAGCAT+CGG + chr1_3:68029203-68029222 Msa0136190:CDS 45.0%
GAAACACTGCCTTTCTCAGA+AGG - chr1_3:68029259-68029278 None:intergenic 45.0%
GAGAATTGGTCAGCAACTAG+AGG + chr1_3:68029357-68029376 Msa0136190:CDS 45.0%
AATTGGTCAGCAACTAGAGG+AGG + chr1_3:68029360-68029379 Msa0136190:CDS 45.0%
TCCGAGATTGAATTGGTTGG+AGG + chr1_3:68029490-68029509 Msa0136190:CDS 45.0%
GAGATTGAATTGGTTGGAGG+TGG + chr1_3:68029493-68029512 Msa0136190:CDS 45.0%
CTTGAAGGGATAAGAAAGCC+GGG + chr1_3:68029520-68029539 Msa0136190:CDS 45.0%
TTGAAGGGATAAGAAAGCCG+GGG + chr1_3:68029521-68029540 Msa0136190:CDS 45.0%
! GAGGCATCTGATAAAATCCC+CGG - chr1_3:68029541-68029560 None:intergenic 45.0%
ATCAGATGCCTCTAAGCTGA+TGG + chr1_3:68029549-68029568 Msa0136190:CDS 45.0%
CTGTAAAGGCCATCATGAGA+CGG - chr1_3:68029679-68029698 None:intergenic 45.0%
GTCTCATGATGGCCTTTACA+GGG + chr1_3:68029678-68029697 Msa0136190:CDS 45.0%
GCTTTCTGCAATCCATTAGC+TGG - chr1_3:68029931-68029950 None:intergenic 45.0%
ACCTGCACAATTACACGTGT+CGG - chr1_3:68029998-68030017 None:intergenic 45.0%
AGCACTCCAGACATAGCTAA+AGG + chr1_3:68030061-68030080 Msa0136190:CDS 45.0%
GGAATCAAAGACCTGAGCAT+TGG + chr1_3:68030082-68030101 Msa0136190:CDS 45.0%
AAGGTCGGGAACAACTAATC+CGG + chr1_3:68030120-68030139 Msa0136190:CDS 45.0%
AATCCGGAATATGACACGGA+TGG + chr1_3:68030136-68030155 Msa0136190:CDS 45.0%
TTGAGACAAAGCAACGGAGT+TGG + chr1_3:68030208-68030227 Msa0136190:CDS 45.0%
GGAGGACATGGTGAAAATAG+TGG + chr1_3:68030343-68030362 Msa0136190:CDS 45.0%
CTACACCATCCAGAAATAGG+AGG + chr1_3:68030416-68030435 Msa0136190:CDS 45.0%
CAAGAGGACCTCAAAACTAG+TGG + chr1_3:68030532-68030551 Msa0136190:three_prime_UTR 45.0%
!! GGGTGGTGTTGGTGTTTACA+CGG + chr1_3:68025846-68025865 Msa0136190:intron 50.0%
!! CGGAGAGTGATTTTGGGTAG+TGG + chr1_3:68025866-68025885 Msa0136190:intron 50.0%
CTATGTTCCCTGAGCTGACT+CGG + chr1_3:68026460-68026479 Msa0136190:intron 50.0%
GAGATTGTTTCCTTGGTCGG+CGG - chr1_3:68026510-68026529 None:intergenic 50.0%
ACATCGGTCGTACATGAGCA+TGG - chr1_3:68027595-68027614 None:intergenic 50.0%
ACAAGATGCCTTTCATGCGC+AGG + chr1_3:68027884-68027903 Msa0136190:intron 50.0%
GCAACATACCTGCGCATGAA+AGG - chr1_3:68027895-68027914 None:intergenic 50.0%
! AGGTGTGCAGCAGAGTATCT+TGG + chr1_3:68028722-68028741 Msa0136190:CDS 50.0%
!! GGCTTTGAGTCCAACCAGAA+TGG + chr1_3:68028992-68029011 Msa0136190:CDS 50.0%
! CAAGGGTATGATCCCATGTG+AGG + chr1_3:68029186-68029205 Msa0136190:CDS 50.0%
TCAGCAACTAGAGGAGGCTT+CGG + chr1_3:68029366-68029385 Msa0136190:CDS 50.0%
TTGGAGGTGGCGAACTTGAA+GGG + chr1_3:68029506-68029525 Msa0136190:CDS 50.0%
ATCTCTCGTCCGTCTCATGA+TGG + chr1_3:68029667-68029686 Msa0136190:CDS 50.0%
CGTCTCATGATGGCCTTTAC+AGG + chr1_3:68029677-68029696 Msa0136190:CDS 50.0%
! CTCGTTTTGCACTGCATGCA+AGG - chr1_3:68029969-68029988 None:intergenic 50.0%
TGCATGCAGTGCAAAACGAG+AGG + chr1_3:68029969-68029988 Msa0136190:CDS 50.0%
ACCGACACGTGTAATTGTGC+AGG + chr1_3:68029994-68030013 Msa0136190:CDS 50.0%
GCAGGTACTACATTTCGAGC+AGG + chr1_3:68030012-68030031 Msa0136190:CDS 50.0%
GCACCATCCGTGTCATATTC+CGG - chr1_3:68030142-68030161 None:intergenic 50.0%
GGAATATGACACGGATGGTG+CGG + chr1_3:68030141-68030160 Msa0136190:CDS 50.0%
GAATATGACACGGATGGTGC+GGG + chr1_3:68030142-68030161 Msa0136190:CDS 50.0%
AATATGACACGGATGGTGCG+GGG + chr1_3:68030143-68030162 Msa0136190:CDS 50.0%
GGGGACAGCTGAGGAATTAA+AGG + chr1_3:68030162-68030181 Msa0136190:CDS 50.0%
GCGTCGTTGAGACAAAGCAA+CGG + chr1_3:68030202-68030221 Msa0136190:CDS 50.0%
AAGCTATGGGCAAGCAAAGG+AGG + chr1_3:68030325-68030344 Msa0136190:CDS 50.0%
!! TCAAAGGCACTTGCACCACC+AGG - chr1_3:68028638-68028657 None:intergenic 55.0%
GTTGGAGGTGGCGAACTTGA+AGG + chr1_3:68029505-68029524 Msa0136190:CDS 55.0%
!! GAAACACTACAGGAGCACCC+TGG + chr1_3:68029875-68029894 Msa0136190:intron 55.0%
GAGCACCCTGGTATCAGCAA+AGG + chr1_3:68029887-68029906 Msa0136190:CDS 55.0%
!! GACCTGAGCATTGGGTCCAA+CGG + chr1_3:68030091-68030110 Msa0136190:CDS 55.0%
TACCGTTGGACCCAATGCTC+AGG - chr1_3:68030096-68030115 None:intergenic 55.0%
TTGGGTCCAACGGTAGCTCA+AGG + chr1_3:68030101-68030120 Msa0136190:CDS 55.0%
GTCCAACGGTAGCTCAAGGT+CGG + chr1_3:68030105-68030124 Msa0136190:CDS 55.0%
TCCAACGGTAGCTCAAGGTC+GGG + chr1_3:68030106-68030125 Msa0136190:CDS 55.0%
TGGGCAAGCAAAGGAGGACA+TGG + chr1_3:68030331-68030350 Msa0136190:CDS 55.0%
GTTTCCTTGGTCGGCGGCAA+AGG - chr1_3:68026504-68026523 None:intergenic 60.0%
GGTCAGAACCGCTGCGTCAT+CGG + chr1_3:68030033-68030052 Msa0136190:CDS 60.0%
GTCAGAACCGCTGCGTCATC+GGG + chr1_3:68030034-68030053 Msa0136190:CDS 60.0%
GCTAGTACCCGATGACGCAG+CGG - chr1_3:68030044-68030063 None:intergenic 60.0%
TCCCGACCTTGAGCTACCGT+TGG - chr1_3:68030110-68030129 None:intergenic 60.0%
TTGGTCGGCGGCAAAGGCCA+CGG - chr1_3:68026498-68026517 None:intergenic 65.0%
GGGCGCACCGAGTCAGCTCA+GGG - chr1_3:68026470-68026489 None:intergenic 70.0%
!! CTGAGCTGACTCGGTGCGCC+CGG + chr1_3:68026469-68026488 Msa0136190:intron 70.0%
CGGCAAAGGCCACGGAGTCC+GGG - chr1_3:68026490-68026509 None:intergenic 70.0%
GCGGCAAAGGCCACGGAGTC+CGG - chr1_3:68026491-68026510 None:intergenic 70.0%
GTGGCCTTTGCCGCCGACCA+AGG + chr1_3:68026497-68026516 Msa0136190:intron 70.0%
GGATGGTGCGGGGACAGCTG+AGG + chr1_3:68030153-68030172 Msa0136190:CDS 70.0%
CGGGCGCACCGAGTCAGCTC+AGG - chr1_3:68026471-68026490 None:intergenic 75.0%
!! CTCGGTGCGCCCGGACTCCG+TGG + chr1_3:68026478-68026497 Msa0136190:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 68025358 68030640 68025358 ID=Msa0136190;Name=Msa0136190
chr1_3 mRNA 68025358 68030640 68025358 ID=Msa0136190-mRNA-1;Parent=Msa0136190;Name=Msa0136190-mRNA-1;_AED=0.02;_eAED=0.02;_QI=396|1|0.8|1|0.75|0.6|5|187|625
chr1_3 exon 68025358 68025656 68025358 ID=Msa0136190-mRNA-1:exon:23454;Parent=Msa0136190-mRNA-1
chr1_3 exon 68026793 68026954 68026793 ID=Msa0136190-mRNA-1:exon:23455;Parent=Msa0136190-mRNA-1
chr1_3 exon 68027906 68027975 68027906 ID=Msa0136190-mRNA-1:exon:23456;Parent=Msa0136190-mRNA-1
chr1_3 exon 68028545 68029720 68028545 ID=Msa0136190-mRNA-1:exon:23457;Parent=Msa0136190-mRNA-1
chr1_3 exon 68029887 68030640 68029887 ID=Msa0136190-mRNA-1:exon:23458;Parent=Msa0136190-mRNA-1
chr1_3 five_prime_UTR 68025358 68025656 68025358 ID=Msa0136190-mRNA-1:five_prime_utr;Parent=Msa0136190-mRNA-1
chr1_3 five_prime_UTR 68026793 68026889 68026793 ID=Msa0136190-mRNA-1:five_prime_utr;Parent=Msa0136190-mRNA-1
chr1_3 CDS 68026890 68026954 68026890 ID=Msa0136190-mRNA-1:cds;Parent=Msa0136190-mRNA-1
chr1_3 CDS 68027906 68027975 68027906 ID=Msa0136190-mRNA-1:cds;Parent=Msa0136190-mRNA-1
chr1_3 CDS 68028545 68029720 68028545 ID=Msa0136190-mRNA-1:cds;Parent=Msa0136190-mRNA-1
chr1_3 CDS 68029887 68030453 68029887 ID=Msa0136190-mRNA-1:cds;Parent=Msa0136190-mRNA-1
chr1_3 three_prime_UTR 68030454 68030640 68030454 ID=Msa0136190-mRNA-1:three_prime_utr;Parent=Msa0136190-mRNA-1
Gene Sequence

>Msa0136190

ATGAAGTTTATGAAACTTGGTTCCAAGCCAGATACATTTCAGACTGATGGGAACAACAATGTTAGGTATGTTGCAAGTGAGTTGGCATCAGATATTATTGTCTGCATAGGGGATACAAAGTTTTACTTACACAAGTTTCCTCTCATATCAAAGAGTTCTCACTTACAGAAGTTGATCTCCCTCAATAATGAAGAAAACATCGACGAAATTCAAATTTCAGACATTCCTGGTGGTGCAAGTGCCTTTGAGATATGTGCTAAGTTTTGCTACGGCATGACTGTTACCCTCAATGCTTACAATGTGATTGCTACTAGGTGTGCAGCAGAGTATCTTGGAATGCATGAAAACATTGAGAAAGGAAACCTTCTTTTCAAGATCGATGTTTTCCTAAGCTCTAGCATTTTTCGTAGTTGGAAGGATTCCATTATCCTTCTTCAGACTACAAAGTCTTTGTCACCATTGGATGAGGAGCAAAAGGTTGTCAACCGTTGCATTGAATCTATAGCAAACAAGGCATGCGTCGATGTGTCTAAAGTTGACTGGTCTTACACATATAACCGAAAAAAGCTTCCGGAAGAAAATGGCTTTGAGTCCAACCAGAATGGAGTTAGAACTCGAAATGTGCCAAAAGACTGGTGGGTTGAAGATTTATGCGAACTTGAAGTTGACATGTACAAATCTGTTATAACAAATATCAAAACCAAGGAAATTCAATCTAATGATGTAATTGGTGAAGCCTTGAAAGCTTATGCTTACAGAAAGTTGCCAAATTTCAGCAAGGGTATGATCCCATGTGAGGATGTGTCAAAGCATCGGTTAATAGTTGAAACTATTGTGAAGTTGTTGCCTTCTGAGAAAGGCAGTGTTTCATGTAGGTTCTTAGTCAAGTTATTGAAAGCTGCGATTTTTGTAGAATCAGAAGATAAGATCAGAGATGTGCTAGTAAAGAGAATTGGTCAGCAACTAGAGGAGGCTTCGGTAAACGATATTTTGATTAAAGCACCAGATGGAGAGATTACAATGTATGATGTTGGTATAGTACAGAAAATTGTAAGGGAGTTTCTTATGAAAGATCACAATTCCGAGATTGAATTGGTTGGAGGTGGCGAACTTGAAGGGATAAGAAAGCCGGGGATTTTATCAGATGCCTCTAAGCTGATGGTTGCAAAACTCATAGATGGATACCTTGTTGAAATTGCGAAGGATCCTAATTTACCATTGTTGGATTTTGTTAATCTTGCTGAGTTAGTTTCTAGCATCTCTCGTCCGTCTCATGATGGCCTTTACAGGGCTATTGACACATATTTGAAGGAGCACCCTGGTATCAGCAAAGGTGAAAAGAAGAGTATATGCCAGCTAATGGATTGCAGAAAGCTATCTGTTGATGCATCCTTGCATGCAGTGCAAAACGAGAGGCTACCGACACGTGTAATTGTGCAGGTACTACATTTCGAGCAGGTCAGAACCGCTGCGTCATCGGGTACTAGCACTCCAGACATAGCTAAAGGAATCAAAGACCTGAGCATTGGGTCCAACGGTAGCTCAAGGTCGGGAACAACTAATCCGGAATATGACACGGATGGTGCGGGGACAGCTGAGGAATTAAAGGCATTAAGAAAGGAACTTGCGTCGTTGAGACAAAGCAACGGAGTTGGAAACAGTTTCAAAGATGGAGATGCTAAACCAAACATGGATAAGGCTGTTATTGGAAAAATGAAAGGGTTGTTGAAGTCAAAGAAGTCTTTCATTAAGCTATGGGCAAGCAAAGGAGGACATGGTGAAAATAGTGGCTCAGATTCATCTGAGAGTATTGGTTCTGTTAACCCTGAAGAAGTTAAATCTACACCATCCAGAAATAGGAGGAATTCAGTTTCCTAA
Protein sequence

>Msa0136190

MKFMKLGSKPDTFQTDGNNNVRYVASELASDIIVCIGDTKFYLHKFPLISKSSHLQKLISLNNEENIDEIQISDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDSIILLQTTKSLSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSKGMIPCEDVSKHRLIVETIVKLLPSEKGSVSCRFLVKLLKAAIFVESEDKIRDVLVKRIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKPGILSDASKLMVAKLIDGYLVEIAKDPNLPLLDFVNLAELVSSISRPSHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGNSFKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEEVKSTPSRNRRNSVS*