AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0089940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0089940 MtrunA17_Chr1g0207461 98.560 625 9 0 1 625 1 625 0.0 1264
Msa0089940 MtrunA17_Chr5g0401341 62.323 637 221 9 1 625 1 630 0.0 747
Msa0089940 MtrunA17_Chr1g0150191 55.193 491 212 6 1 487 1 487 0.0 533
Msa0089940 MtrunA17_Chr8g0367891 42.357 628 282 15 1 588 1 588 4.49e-136 410
Msa0089940 MtrunA17_Chr5g0412591 40.221 542 254 8 1 507 1 507 5.03e-124 379
Msa0089940 MtrunA17_Chr4g0076521 36.918 558 308 9 1 541 1 531 3.69e-121 372
Msa0089940 MtrunA17_Chr2g0279481 37.542 594 308 15 5 546 23 605 8.67e-121 374
Msa0089940 MtrunA17_Chr4g0050021 37.828 534 285 8 5 497 23 550 2.57e-119 369
Msa0089940 MtrunA17_Chr2g0303541 39.042 543 298 9 1 518 1 535 1.18e-115 359
Msa0089940 MtrunA17_Chr2g0290741 36.614 508 275 7 1 496 1 473 3.56e-112 348
Msa0089940 MtrunA17_Chr2g0285511 34.026 626 362 13 1 608 1 593 8.52e-107 335
Msa0089940 MtrunA17_Chr1g0181181 35.263 570 312 14 1 546 1 537 3.66e-105 329
Msa0089940 MtrunA17_Chr5g0401451 38.821 492 261 13 25 499 37 505 1.05e-103 327
Msa0089940 MtrunA17_Chr8g0382231 32.343 572 283 14 18 546 42 552 1.05e-98 314
Msa0089940 MtrunA17_Chr2g0320691 34.438 543 312 10 13 528 10 535 1.15e-96 309
Msa0089940 MtrunA17_Chr4g0010091 35.206 534 320 10 23 546 29 546 2.14e-94 303
Msa0089940 MtrunA17_Chr4g0053841 36.456 491 281 9 25 499 10 485 3.12e-94 301
Msa0089940 MtrunA17_Chr1g0195911 34.815 540 305 11 26 549 34 542 1.45e-91 295
Msa0089940 MtrunA17_Chr8g0374011 36.542 509 271 13 23 488 15 514 2.26e-91 296
Msa0089940 MtrunA17_Chr7g0268781 34.637 537 321 11 26 546 34 556 8.02e-87 283
Msa0089940 MtrunA17_Chr7g0245201 33.211 545 321 12 18 546 51 568 3.38e-84 276
Msa0089940 MtrunA17_Chr1g0199631 35.853 463 273 12 46 492 8 462 2.81e-82 270
Msa0089940 MtrunA17_Chr3g0108331 34.025 482 268 10 25 493 21 465 2.61e-80 264
Msa0089940 MtrunA17_Chr1g0191711 28.909 550 311 11 11 546 43 526 3.36e-78 258
Msa0089940 MtrunA17_Chr5g0432861 31.791 497 282 8 25 499 22 483 6.37e-78 258
Msa0089940 MtrunA17_Chr2g0332281 38.978 313 154 6 213 506 24 318 3.16e-58 201
Msa0089940 MtrunA17_Chr4g0003891 33.659 410 229 9 207 605 40 417 2.69e-57 199
Msa0089940 MtrunA17_Chr4g0023801 27.815 453 288 13 74 518 52 473 2.54e-39 152
Msa0089940 MtrunA17_Chr4g0037661 26.273 491 313 14 29 493 4 471 3.10e-37 145
Msa0089940 MtrunA17_Chr1g0163311 26.875 480 278 16 41 486 17 457 2.84e-35 140
Msa0089940 MtrunA17_Chr2g0280541 27.907 387 242 12 96 475 3 359 3.12e-28 118
Msa0089940 MtrunA17_Chr1g0206621 38.235 136 82 1 36 169 76 211 2.67e-25 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0089940 AT2G14820.2 61.383 593 208 8 1 584 1 581 0.0 723
Msa0089940 AT2G14820.1 61.383 593 208 8 1 584 1 581 0.0 723
Msa0089940 AT4G37590.1 50.163 612 228 14 1 594 1 553 0.0 551
Msa0089940 AT5G67440.3 49.596 619 244 14 1 608 1 562 0.0 535
Msa0089940 AT5G67440.1 49.596 619 244 14 1 608 1 562 0.0 535
Msa0089940 AT2G23050.1 56.225 498 170 9 1 493 1 455 0.0 523
Msa0089940 AT4G31820.1 49.899 495 222 7 1 492 1 472 4.28e-161 474
Msa0089940 AT5G67440.2 48.007 577 233 13 43 608 5 525 2.43e-160 471
Msa0089940 AT1G67900.5 42.701 548 266 10 1 512 1 536 2.00e-135 410
Msa0089940 AT1G67900.1 42.701 548 266 10 1 512 1 536 2.00e-135 410
Msa0089940 AT1G67900.3 42.701 548 266 10 1 512 1 536 2.00e-135 410
Msa0089940 AT1G67900.6 42.701 548 266 10 1 512 1 536 2.00e-135 410
Msa0089940 AT1G67900.2 42.701 548 266 10 1 512 1 536 2.00e-135 410
Msa0089940 AT1G67900.4 42.701 548 266 10 1 512 1 536 2.00e-135 410
Msa0089940 AT4G31820.2 48.753 441 201 6 55 492 1 419 2.75e-135 405
Msa0089940 AT2G23050.2 52.756 381 138 6 113 493 1 339 1.29e-125 375
Msa0089940 AT5G47800.3 38.833 497 270 8 1 486 1 474 4.10e-120 368
Msa0089940 AT5G47800.1 38.833 497 270 8 1 486 1 474 4.10e-120 368
Msa0089940 AT5G47800.4 38.833 497 270 8 1 486 1 474 4.10e-120 368
Msa0089940 AT3G26490.1 40.230 522 273 9 1 493 1 512 7.52e-120 368
Msa0089940 AT3G26490.3 40.230 522 273 9 1 493 1 512 7.52e-120 368
Msa0089940 AT3G26490.4 40.230 522 273 9 1 493 1 512 7.52e-120 368
Msa0089940 AT5G47800.2 38.833 497 270 8 1 486 114 587 3.09e-118 367
Msa0089940 AT5G03250.1 36.237 574 319 15 1 547 1 554 1.05e-107 337
Msa0089940 AT5G13600.1 37.938 514 280 15 1 492 1 497 3.15e-104 328
Msa0089940 AT1G30440.1 37.739 522 285 12 1 492 1 512 2.11e-103 328
Msa0089940 AT3G26490.2 38.841 466 246 9 1 437 1 456 1.43e-97 308
Msa0089940 AT5G67385.1 37.525 493 276 10 7 488 3 474 4.42e-97 310
Msa0089940 AT3G44820.1 34.297 519 303 9 8 494 5 517 8.32e-94 302
Msa0089940 AT1G03010.1 35.816 564 305 15 18 546 22 563 7.01e-92 297
Msa0089940 AT1G03010.2 36.232 552 299 14 26 546 7 536 1.67e-91 295
Msa0089940 AT1G03010.3 36.151 556 302 14 22 546 29 562 2.84e-91 295
Msa0089940 AT5G48800.1 34.146 533 317 9 23 546 36 543 3.49e-91 295
Msa0089940 AT3G08660.1 36.290 496 268 14 8 496 21 475 7.77e-88 285
Msa0089940 AT5G66560.1 33.333 564 286 14 23 509 14 564 1.50e-87 286
Msa0089940 AT5G10250.2 34.387 506 248 12 23 488 45 506 9.37e-87 283
Msa0089940 AT2G47860.1 33.514 552 311 12 22 546 31 553 1.01e-86 283
Msa0089940 AT5G67385.4 37.778 450 249 9 49 488 1 429 1.91e-86 280
Msa0089940 AT5G67385.5 37.778 450 249 9 49 488 1 429 1.91e-86 280
Msa0089940 AT5G67385.2 37.778 450 249 9 49 488 1 429 1.91e-86 280
Msa0089940 AT5G67385.3 37.778 450 249 9 49 488 1 429 1.91e-86 280
Msa0089940 AT5G66560.3 33.516 546 273 14 41 509 3 535 8.19e-85 278
Msa0089940 AT5G10250.1 34.545 495 247 12 23 488 45 491 1.42e-83 274
Msa0089940 AT5G66560.4 35.443 474 260 12 69 509 65 525 1.49e-82 272
Msa0089940 AT2G30520.1 33.682 478 268 10 25 488 27 469 4.39e-82 270
Msa0089940 AT3G08570.1 34.096 481 281 10 24 488 30 490 5.96e-82 270
Msa0089940 AT2G47860.3 32.174 575 311 13 22 546 31 576 1.50e-81 270
Msa0089940 AT3G49970.1 38.322 441 211 12 41 473 7 394 3.86e-80 263
Msa0089940 AT3G49970.2 38.322 441 211 12 41 473 7 394 3.86e-80 263
Msa0089940 AT3G08660.3 36.866 434 234 12 70 496 15 415 4.98e-77 254
Msa0089940 AT3G50840.1 34.845 485 261 10 23 488 11 459 7.22e-77 255
Msa0089940 AT2G30520.2 33.626 455 253 10 48 488 2 421 9.61e-75 249
Msa0089940 AT2G30520.3 33.626 455 253 10 48 488 2 421 9.61e-75 249
Msa0089940 AT5G03250.2 34.354 457 263 12 113 547 1 442 3.94e-70 235
Msa0089940 AT3G50840.2 34.205 459 247 10 49 488 1 423 1.46e-67 230
Msa0089940 AT3G50840.3 34.205 459 247 10 49 488 1 423 1.46e-67 230
Msa0089940 AT3G08660.2 34.862 436 237 13 8 437 21 415 3.92e-67 226
Msa0089940 AT2G47860.4 33.409 440 242 10 22 437 31 443 4.97e-66 223
Msa0089940 AT5G66560.2 32.359 479 247 13 23 437 14 479 7.90e-64 218
Msa0089940 AT2G47860.6 31.749 463 242 11 22 437 31 466 6.41e-61 210
Msa0089940 AT2G47860.5 32.321 461 259 11 113 546 1 435 1.41e-57 202
Msa0089940 AT2G47860.2 32.321 461 259 11 113 546 1 435 1.41e-57 202
Msa0089940 AT5G64330.2 38.376 271 145 4 7 260 33 298 3.38e-56 202
Msa0089940 AT5G64330.2 42.308 234 118 3 271 488 373 605 1.44e-50 186
Msa0089940 AT5G64330.1 38.376 271 145 4 7 260 33 298 8.82e-56 202
Msa0089940 AT5G64330.1 41.772 237 115 4 271 488 373 605 1.47e-50 187
Msa0089940 AT1G52770.1 36.789 299 153 4 213 493 28 308 2.49e-52 186
Msa0089940 AT5G64330.3 42.308 234 118 3 271 488 314 546 4.66e-51 186
Msa0089940 AT5G64330.3 37.344 241 130 4 38 260 2 239 5.06e-46 172
Msa0089940 AT5G48130.1 26.377 599 375 18 28 608 39 589 4.10e-48 178
Msa0089940 AT3G15570.1 34.899 298 154 4 213 488 29 308 3.76e-47 172
Msa0089940 AT5G17580.2 27.459 488 311 14 11 488 3 457 3.52e-42 160
Msa0089940 AT5G17580.1 27.766 479 295 14 24 488 1 442 1.51e-40 155
Msa0089940 AT3G19850.1 25.688 436 283 9 70 487 52 464 1.35e-38 150
Msa0089940 AT3G03510.1 27.404 416 235 12 80 488 6 361 3.60e-35 139
Msa0089940 AT1G50280.1 25.581 473 300 13 37 482 13 460 3.97e-33 134
Msa0089940 AT1G50280.2 26.027 438 277 12 67 482 15 427 3.31e-32 130
Msa0089940 AT3G22104.1 23.767 446 292 11 37 473 14 420 2.37e-29 122
Msa0089940 AT3G22104.4 22.977 383 245 9 100 473 4 345 7.94e-21 95.9
Msa0089940 AT3G22104.2 22.977 383 245 9 100 473 4 345 7.94e-21 95.9
Msa0089940 AT3G22104.3 22.977 383 245 9 100 473 4 345 7.94e-21 95.9
Msa0089940 AT3G49900.1 31.792 173 97 5 392 547 214 382 2.41e-13 73.2
Msa0089940 AT3G49900.2 31.250 176 97 6 392 547 214 385 1.23e-11 67.8

Find 153 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGAATTCCTCCTATTTC+TGG 0.150173 1_2:+71688988 None:intergenic
GTACCACAACATTGAATTTC+TGG 0.184041 1_2:+71694006 None:intergenic
ATCATACCCTTGCTGAAATT+TGG 0.196113 1_2:+71690238 None:intergenic
TTCTCTCTTCACCCTTCTTC+TGG 0.209501 1_2:-71693854 Msa0089940:five_prime_UTR
CGTCTCATGATGGCCTTTAC+AGG 0.230035 1_2:-71689736 Msa0089940:CDS
GGTGTAGATTTAACTTCTTC+AGG 0.238087 1_2:+71689013 None:intergenic
AAATCCAACAATGGTAAATT+AGG 0.244177 1_2:+71689797 None:intergenic
ATTCAATCTAATGATGTAAT+TGG 0.274781 1_2:-71690295 Msa0089940:CDS
AACATGGATAAGGCTGTTAT+TGG 0.275085 1_2:-71689151 Msa0089940:CDS
TTCGAGTTCTAACTCCATTC+TGG 0.292794 1_2:+71690407 None:intergenic
TTGAGTTACCATCTTCTTAG+AGG 0.298279 1_2:-71692568 Msa0089940:five_prime_UTR
ATTAAAGACACTAATGTATT+AGG 0.298875 1_2:-71693966 Msa0089940:five_prime_UTR
AAGTATATATAGTTTAAAAT+AGG 0.311056 1_2:-71688835 Msa0089940:three_prime_UTR
GTGAGCCAATAGCTACATTT+AGG 0.318718 1_2:+71688964 None:intergenic
TATGTAGGGATGTTTGAATT+AGG 0.319470 1_2:-71692626 Msa0089940:intron
TTGATTCCTTTAGCTATGTC+TGG 0.324835 1_2:+71689346 None:intergenic
TCTTCAACCCACCAGTCTTT+TGG 0.329870 1_2:+71690379 None:intergenic
GGATCCTAATTTACCATTGT+TGG 0.332636 1_2:-71689801 Msa0089940:CDS
TCTGTAAGCATAAGCTTTCA+AGG 0.351574 1_2:+71690267 None:intergenic
AATCTACACCATCCAGAAAT+AGG 0.361267 1_2:-71689000 Msa0089940:CDS
AGTTTCCTAAATGTAGCTAT+TGG 0.366910 1_2:-71688969 Msa0089940:exon
CCATCAGTCTGAAATGTATC+TGG 0.381210 1_2:+71692495 None:intergenic
ATAACAGCCTTATCCATGTT+TGG 0.388738 1_2:+71689154 None:intergenic
GGGGACAGCTGAGGAATTAA+AGG 0.396543 1_2:-71689251 Msa0089940:CDS
ATCATTAGATTGAATTTCCT+TGG 0.398466 1_2:+71690303 None:intergenic
GCACCATCCGTGTCATATTC+CGG 0.403601 1_2:+71689274 None:intergenic
TACCACAACATTGAATTTCT+GGG 0.408567 1_2:+71694007 None:intergenic
GAAGAGTATATGCCAGCTAA+TGG 0.411454 1_2:-71689497 Msa0089940:CDS
TCACAATTCCGAGATTGAAT+TGG 0.413050 1_2:-71689930 Msa0089940:CDS
TGTAGTCTGAAGAAGGATAA+TGG 0.416115 1_2:+71690582 None:intergenic
AAACATCGATCTTGAAAAGA+AGG 0.427976 1_2:+71690641 None:intergenic
GTCAGAACCGCTGCGTCATC+GGG 0.436682 1_2:-71689379 Msa0089940:CDS
GGTCAGAACCGCTGCGTCAT+CGG 0.438094 1_2:-71689380 Msa0089940:CDS
CTGATGGGAACAACAATGTT+AGG 0.441088 1_2:-71692479 Msa0089940:intron
AAGATGAAGTTTATGAAACT+TGG 0.441776 1_2:-71692525 Msa0089940:CDS
GAATCAAAGACCTGAGCATT+GGG 0.443547 1_2:-71689330 Msa0089940:CDS
CAGATATTATTGTCTGCATA+GGG 0.447255 1_2:-71691484 Msa0089940:CDS
AGAAGTCTTTCATTAAGCTA+TGG 0.447436 1_2:-71689102 Msa0089940:CDS
TACAAAGTCTTTGTCACCAT+TGG 0.450362 1_2:-71690563 Msa0089940:CDS
GAAGTCTTTCATTAAGCTAT+GGG 0.452509 1_2:-71689101 Msa0089940:CDS
AATCACATTGTAAGCATTGA+GGG 0.462223 1_2:+71690720 None:intergenic
ATTCAAATTTCAGACATTCC+TGG 0.463677 1_2:-71690796 Msa0089940:CDS
GATGTGCTAGTAAAGAGAAT+TGG 0.464303 1_2:-71690070 Msa0089940:CDS
CTTACAATGTGATTGCTACT+AGG 0.469814 1_2:-71690711 Msa0089940:CDS
GTGTAGATTTAACTTCTTCA+GGG 0.472605 1_2:+71689014 None:intergenic
ACCATTGGATGAGGAGCAAA+AGG 0.477736 1_2:-71690548 Msa0089940:CDS
CTCGAAATGTGCCAAAAGAC+TGG 0.478657 1_2:-71690390 Msa0089940:CDS
TACATTGTAATCTCTCCATC+TGG 0.481738 1_2:+71690001 None:intergenic
GTATAGTACAGAAAATTGTA+AGG 0.482058 1_2:-71689970 Msa0089940:CDS
GTCTTTGTCACCATTGGATG+AGG 0.486439 1_2:-71690557 Msa0089940:CDS
TTTCACCTTTGCTGATACCA+GGG 0.486873 1_2:+71689521 None:intergenic
GTTGGAAACAGTTTCAAAGA+TGG 0.488525 1_2:-71689187 Msa0089940:CDS
TGCTAAACCAAACATGGATA+AGG 0.489081 1_2:-71689161 Msa0089940:CDS
CCAGATACATTTCAGACTGA+TGG 0.490097 1_2:-71692495 Msa0089940:CDS
GAATATGACACGGATGGTGC+GGG 0.491251 1_2:-71689271 Msa0089940:CDS
ATGGTTGCAAAACTCATAGA+TGG 0.492757 1_2:-71689845 Msa0089940:CDS
GCTTTCTGCAATCCATTAGC+TGG 0.493502 1_2:+71689485 None:intergenic
GGCTATTGACACATATTTGA+AGG 0.499410 1_2:-71689714 Msa0089940:intron
GGAATCAAAGACCTGAGCAT+TGG 0.502284 1_2:-71689331 Msa0089940:CDS
GAGATTGAATTGGTTGGAGG+TGG 0.502864 1_2:-71689920 Msa0089940:CDS
TCAGATTCATCTGAGAGTAT+TGG 0.503452 1_2:-71689046 Msa0089940:CDS
AGTCTGAAATGTATCTGGCT+TGG 0.503488 1_2:+71692500 None:intergenic
AATTCCGAGATTGAATTGGT+TGG 0.507004 1_2:-71689926 Msa0089940:CDS
AGGTGTGCAGCAGAGTATCT+TGG 0.508603 1_2:-71690691 Msa0089940:CDS
TTTGTTGTTGTTGCTTGCAA+AGG 0.510207 1_2:+71693935 None:intergenic
ATGCATGAAAACATTGAGAA+AGG 0.510465 1_2:-71690667 Msa0089940:CDS
TCCGAGATTGAATTGGTTGG+AGG 0.510666 1_2:-71689923 Msa0089940:CDS
GTTGGAGGTGGCGAACTTGA+AGG 0.511286 1_2:-71689908 Msa0089940:CDS
TCCCGACCTTGAGCTACCGT+TGG 0.511760 1_2:+71689306 None:intergenic
ATCAGATGCCTCTAAGCTGA+TGG 0.515822 1_2:-71689864 Msa0089940:CDS
TCAGATATTATTGTCTGCAT+AGG 0.515929 1_2:-71691485 Msa0089940:CDS
AGTTCTAACTCCATTCTGGT+TGG 0.516845 1_2:+71690411 None:intergenic
CATTGAATCTATAGCAAACA+AGG 0.517035 1_2:-71690512 Msa0089940:CDS
CTTTCAGGTAAACCAGAAGA+AGG 0.517351 1_2:+71693842 None:intergenic
ATGTGTCAATAGCCCTGTAA+AGG 0.517885 1_2:+71689723 None:intergenic
AAGTTGTTGCCTTCTGAGAA+AGG 0.525097 1_2:-71690166 Msa0089940:CDS
GGAATTAAAGGCATTAAGAA+AGG 0.526651 1_2:-71689239 Msa0089940:CDS
GGCTTTGAGTCCAACCAGAA+TGG 0.526969 1_2:-71690421 Msa0089940:CDS
TACCGTTGGACCCAATGCTC+AGG 0.527764 1_2:+71689320 None:intergenic
CTTGAAGGGATAAGAAAGCC+GGG 0.528275 1_2:-71689893 Msa0089940:CDS
ATCTCTCGTCCGTCTCATGA+TGG 0.528536 1_2:-71689746 Msa0089940:CDS
AAGGTCGGGAACAACTAATC+CGG 0.530475 1_2:-71689293 Msa0089940:CDS
TCAGCAACTAGAGGAGGCTT+CGG 0.532290 1_2:-71690047 Msa0089940:CDS
TGCTTTGACACATCCTCACA+TGG 0.533200 1_2:+71690214 None:intergenic
TCCAACGGTAGCTCAAGGTC+GGG 0.534974 1_2:-71689307 Msa0089940:CDS
TCTACTTTCCTCTAAGAAGA+TGG 0.536078 1_2:+71692560 None:intergenic
GAGGCATCTGATAAAATCCC+CGG 0.536394 1_2:+71689875 None:intergenic
GGAGGACATGGTGAAAATAG+TGG 0.539111 1_2:-71689070 Msa0089940:CDS
ACCTCCAACCAATTCAATCT+CGG 0.540022 1_2:+71689922 None:intergenic
CAACTCATGTAGTAAAACCT+TGG 0.543822 1_2:-71688796 Msa0089940:three_prime_UTR
GTTAGTTTCTTTATGTCAAG+AGG 0.548023 1_2:-71688898 Msa0089940:three_prime_UTR
CAATCACATTGTAAGCATTG+AGG 0.552608 1_2:+71690719 None:intergenic
TTGAGACAAAGCAACGGAGT+TGG 0.553727 1_2:-71689205 Msa0089940:CDS
ACTTGAAGGGATAAGAAAGC+CGG 0.555989 1_2:-71689894 Msa0089940:CDS
AAGACTTTGTAGTCTGAAGA+AGG 0.556254 1_2:+71690575 None:intergenic
GACCTGAGCATTGGGTCCAA+CGG 0.556700 1_2:-71689322 Msa0089940:CDS
GAAACACTGCCTTTCTCAGA+AGG 0.557771 1_2:+71690157 None:intergenic
TTGGAGGTGGCGAACTTGAA+GGG 0.557828 1_2:-71689907 Msa0089940:CDS
CAGGTATGTTGCAAGTGAGT+TGG 0.560221 1_2:-71691510 Msa0089940:CDS
AGAAAGGCAGTGTTTCATGT+AGG 0.562526 1_2:-71690150 Msa0089940:CDS
GTCCAACGGTAGCTCAAGGT+CGG 0.564380 1_2:-71689308 Msa0089940:CDS
AAGCTATGGGCAAGCAAAGG+AGG 0.564447 1_2:-71689088 Msa0089940:CDS
ACCGACACGTGTAATTGTGC+AGG 0.570689 1_2:-71689419 Msa0089940:CDS
GAGATTACAATGTATGATGT+TGG 0.570865 1_2:-71689992 Msa0089940:CDS
GAATTCCTCCTATTTCTGGA+TGG 0.571158 1_2:+71688992 None:intergenic
CAGATACATTTCAGACTGAT+GGG 0.573177 1_2:-71692494 Msa0089940:CDS
GCAGGTACTACATTTCGAGC+AGG 0.578783 1_2:-71689401 Msa0089940:CDS
TCAAAGGCACTTGCACCACC+AGG 0.579140 1_2:+71690778 None:intergenic
TGGAGATGCTAAACCAAACA+TGG 0.581860 1_2:-71689167 Msa0089940:CDS
AGCACTCCAGACATAGCTAA+AGG 0.582825 1_2:-71689352 Msa0089940:CDS
GTCTCATGATGGCCTTTACA+GGG 0.582962 1_2:-71689735 Msa0089940:CDS
TCGATGTGTCTAAAGTTGAC+TGG 0.584614 1_2:-71690483 Msa0089940:CDS
GGAATATGACACGGATGGTG+CGG 0.585843 1_2:-71689272 Msa0089940:CDS
ATCCCAGAAATTCAATGTTG+TGG 0.586970 1_2:-71694009 Msa0089940:five_prime_UTR
TGAGAACTCTTTGATATGAG+AGG 0.591088 1_2:+71690865 None:intergenic
AAGTTGCCAAATTTCAGCAA+GGG 0.593702 1_2:-71690244 Msa0089940:CDS
TTGGGTCCAACGGTAGCTCA+AGG 0.599883 1_2:-71689312 Msa0089940:CDS
TTGCTATAGATTCAATGCAA+CGG 0.601629 1_2:+71690518 None:intergenic
AAAGTTGCCAAATTTCAGCA+AGG 0.602734 1_2:-71690245 Msa0089940:CDS
ACAACATTGAATTTCTGGGA+TGG 0.605848 1_2:+71694011 None:intergenic
GAAATGTGCCAAAAGACTGG+TGG 0.606762 1_2:-71690387 Msa0089940:CDS
GGATGGTGCGGGGACAGCTG+AGG 0.606898 1_2:-71689260 Msa0089940:CDS
TGGGCAAGCAAAGGAGGACA+TGG 0.607253 1_2:-71689082 Msa0089940:CDS
GAGAATTGGTCAGCAACTAG+AGG 0.607732 1_2:-71690056 Msa0089940:CDS
ATTAAGCTATGGGCAAGCAA+AGG 0.609202 1_2:-71689091 Msa0089940:CDS
AAACTTAGCACATATCTCAA+AGG 0.610871 1_2:+71690762 None:intergenic
CTACACCATCCAGAAATAGG+AGG 0.614194 1_2:-71688997 Msa0089940:CDS
GTGAGGATGTGTCAAAGCAT+CGG 0.618211 1_2:-71690210 Msa0089940:CDS
CAAGAGGACCTCAAAACTAG+TGG 0.618887 1_2:-71688882 Msa0089940:three_prime_UTR
ACCTGCACAATTACACGTGT+CGG 0.621274 1_2:+71689418 None:intergenic
TATAGTACAGAAAATTGTAA+GGG 0.624280 1_2:-71689969 Msa0089940:CDS
ATACCTTGTTGAAATTGCGA+AGG 0.627461 1_2:-71689822 Msa0089940:CDS
CTGTAAAGGCCATCATGAGA+CGG 0.630996 1_2:+71689737 None:intergenic
AATTGGTCAGCAACTAGAGG+AGG 0.631005 1_2:-71690053 Msa0089940:CDS
GTAAAGATCTTACACAAACA+TGG 0.636568 1_2:+71693764 None:intergenic
TTTCAGGTAAACCAGAAGAA+GGG 0.641130 1_2:+71693843 None:intergenic
AACTAATCCGGAATATGACA+CGG 0.643937 1_2:-71689281 Msa0089940:CDS
TGCATGCAGTGCAAAACGAG+AGG 0.647697 1_2:-71689444 Msa0089940:CDS
GATCCTTCGCAATTTCAACA+AGG 0.647912 1_2:+71689819 None:intergenic
CAAATTTCAGACATTCCTGG+TGG 0.649529 1_2:-71690793 Msa0089940:CDS
AATCCGGAATATGACACGGA+TGG 0.653678 1_2:-71689277 Msa0089940:CDS
GAGCACCCTGGTATCAGCAA+AGG 0.656688 1_2:-71689526 Msa0089940:CDS
TATAACAAATATCAAAACCA+AGG 0.664477 1_2:-71690320 Msa0089940:CDS
AAATGTGCCAAAAGACTGGT+GGG 0.670247 1_2:-71690386 Msa0089940:CDS
AGATATTATTGTCTGCATAG+GGG 0.671630 1_2:-71691483 Msa0089940:CDS
CAAGGGTATGATCCCATGTG+AGG 0.680645 1_2:-71690227 Msa0089940:CDS
GAAACACTACAGGAGCACCC+TGG 0.682303 1_2:-71689538 Msa0089940:intron
AATATGACACGGATGGTGCG+GGG 0.682586 1_2:-71689270 Msa0089940:CDS
AGATTAACAAAATCCAACAA+TGG 0.687270 1_2:+71689788 None:intergenic
GCTAGTACCCGATGACGCAG+CGG 0.707239 1_2:+71689372 None:intergenic
TTGAAGGGATAAGAAAGCCG+GGG 0.713574 1_2:-71689892 Msa0089940:CDS
GCTTTGACACATCCTCACAT+GGG 0.720284 1_2:+71690215 None:intergenic
GCGTCGTTGAGACAAAGCAA+CGG 0.727282 1_2:-71689211 Msa0089940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATGCAAATTTTTTATATT+AGG + chr1_2:71690519-71690538 None:intergenic 10.0%
!!! AAATTGCTATTAAATTTATT+AGG + chr1_2:71691440-71691459 None:intergenic 10.0%
!!! AAACAATTAGTTTATTTATT+AGG + chr1_2:71691668-71691687 None:intergenic 10.0%
!!! AAGTATATATAGTTTAAAAT+AGG - chr1_2:71694014-71694033 Msa0089940:five_prime_UTR 10.0%
!! AAATCTAGTAAAATAATGTT+AGG + chr1_2:71689399-71689418 None:intergenic 15.0%
!!! TTAAATACTGAAAAGTATAA+CGG + chr1_2:71690092-71690111 None:intergenic 15.0%
!!! ATTTTTTATATTAGGAACAA+AGG + chr1_2:71690511-71690530 None:intergenic 15.0%
!! AAATATTAAAAGAAACTGTT+GGG + chr1_2:71690558-71690577 None:intergenic 15.0%
!!! TTTTAATATTTCTTCACTAT+TGG - chr1_2:71690567-71690586 Msa0089940:CDS 15.0%
!!! ATTTTTAGTGATTAAGAAAA+TGG - chr1_2:71690668-71690687 Msa0089940:CDS 15.0%
!!! TATTAGGATTTTTTTTCATT+GGG + chr1_2:71691652-71691671 None:intergenic 15.0%
!!! TTATTAGGATTTTTTTTCAT+TGG + chr1_2:71691653-71691672 None:intergenic 15.0%
!! AAACTACAAATAAAAAGATT+TGG + chr1_2:71691964-71691983 None:intergenic 15.0%
!! ATTAAAGACACTAATGTATT+AGG - chr1_2:71688883-71688902 Msa0089940:three_prime_UTR 20.0%
!!! TAATAAAGTTTTAAGCTTTC+AGG + chr1_2:71689025-71689044 None:intergenic 20.0%
!! TAAGATCTTTACTTTCTTAA+TGG - chr1_2:71689096-71689115 Msa0089940:CDS 20.0%
!!! TTTTGTTTTTCTCTTAGTAA+TGG - chr1_2:71689138-71689157 Msa0089940:CDS 20.0%
!! TTTCATCTCTAAATTTGAAA+AGG - chr1_2:71689164-71689183 Msa0089940:CDS 20.0%
!! TTCATCTCTAAATTTGAAAA+GGG - chr1_2:71689165-71689184 Msa0089940:CDS 20.0%
!!! TTTTTAAACAATGACTCAAA+CGG - chr1_2:71689208-71689227 Msa0089940:CDS 20.0%
!!! TTTTTTATATTGTGATGAGT+TGG - chr1_2:71689244-71689263 Msa0089940:CDS 20.0%
!!! TTTTTATATTGTGATGAGTT+GGG - chr1_2:71689245-71689264 Msa0089940:CDS 20.0%
!! TAAAGAAATAAAGAAAAGTG+AGG - chr1_2:71689818-71689837 Msa0089940:CDS 20.0%
!! TATAAAACATATCCCAAAAA+AGG + chr1_2:71690205-71690224 None:intergenic 20.0%
!! GAAATATTAAAAGAAACTGT+TGG + chr1_2:71690559-71690578 None:intergenic 20.0%
!! ACAAAATTAATCTTTCTGAA+AGG - chr1_2:71690737-71690756 Msa0089940:CDS 20.0%
!! GTCTAATTGAAAAGTAATAA+TGG + chr1_2:71691131-71691150 None:intergenic 20.0%
!! AATCTTCTATATTTGAAAAG+GGG + chr1_2:71691163-71691182 None:intergenic 20.0%
!! CAATCTTCTATATTTGAAAA+GGG + chr1_2:71691164-71691183 None:intergenic 20.0%
!!! CTTTTCAAATATAGAAGATT+GGG - chr1_2:71691163-71691182 Msa0089940:intron 20.0%
!! CTATTAAATTTATTAGGCAT+TGG + chr1_2:71691434-71691453 None:intergenic 20.0%
!!! AAATTTCATTCCTTTTATTG+TGG + chr1_2:71691518-71691537 None:intergenic 20.0%
!! AAAAATACTTGAAATCCAAA+AGG + chr1_2:71691558-71691577 None:intergenic 20.0%
!!! TTTAAATTGGGTTAGATTTA+TGG - chr1_2:71691812-71691831 Msa0089940:intron 20.0%
!! TATAACAAATATCAAAACCA+AGG - chr1_2:71692529-71692548 Msa0089940:exon 20.0%
!! ATTCAATCTAATGATGTAAT+TGG - chr1_2:71692554-71692573 Msa0089940:five_prime_UTR 20.0%
!! TATAGTACAGAAAATTGTAA+GGG - chr1_2:71692880-71692899 Msa0089940:intron 20.0%
!! TCTCTATACTGAATTTAAAA+TGG + chr1_2:71693200-71693219 None:intergenic 20.0%
!!! ACTGTTTTGTTTTTTGTGTA+TGG - chr1_2:71688959-71688978 Msa0089940:three_prime_UTR 25.0%
!!! AAGGGTATGTGTATTTTTTT+AGG - chr1_2:71689183-71689202 Msa0089940:CDS 25.0%
!! TTTTAAACAATGACTCAAAC+GGG - chr1_2:71689209-71689228 Msa0089940:CDS 25.0%
! GATCATAACTTTATACTATG+TGG + chr1_2:71689373-71689392 None:intergenic 25.0%
!!! GATTTTTGTTTGTTACATTC+TGG - chr1_2:71689414-71689433 Msa0089940:CDS 25.0%
! TTGTTCATTTATTCCATACT+TGG - chr1_2:71689528-71689547 Msa0089940:CDS 25.0%
! ATAGATAGATATACACATGT+TGG - chr1_2:71689703-71689722 Msa0089940:intron 25.0%
! AGAACCTTTGCTTAAAAAAT+TGG - chr1_2:71689992-71690011 Msa0089940:CDS 25.0%
! GAACCTTTGCTTAAAAAATT+GGG - chr1_2:71689993-71690012 Msa0089940:CDS 25.0%
!!! TATCCCAATTTTTTAAGCAA+AGG + chr1_2:71689999-71690018 None:intergenic 25.0%
! CAGAAGGTTATTATAAAAGA+TGG + chr1_2:71690049-71690068 None:intergenic 25.0%
! GAGAAAAGAAAAGTTTCTAA+AGG + chr1_2:71690123-71690142 None:intergenic 25.0%
! AAATGTATATCCAAGTTTCT+TGG + chr1_2:71690154-71690173 None:intergenic 25.0%
!! TTGGGATATGTTTTATATGT+AGG - chr1_2:71690208-71690227 Msa0089940:CDS 25.0%
!! TGGGATATGTTTTATATGTA+GGG - chr1_2:71690209-71690228 Msa0089940:CDS 25.0%
! AAGATGAAGTTTATGAAACT+TGG - chr1_2:71690324-71690343 Msa0089940:CDS 25.0%
!! TTTATGCAATGCAATCTTTT+AGG - chr1_2:71690643-71690662 Msa0089940:CDS 25.0%
! ATAATGCTTGATCTAAATGA+AGG - chr1_2:71690786-71690805 Msa0089940:CDS 25.0%
!!! AACAGTAATTTAAGCATTGA+AGG + chr1_2:71690950-71690969 None:intergenic 25.0%
! CCAATCTTCTATATTTGAAA+AGG + chr1_2:71691165-71691184 None:intergenic 25.0%
!! CCTTTTCAAATATAGAAGAT+TGG - chr1_2:71691162-71691181 Msa0089940:intron 25.0%
! GAACAAACTATCTAAAAAGA+GGG + chr1_2:71691298-71691317 None:intergenic 25.0%
! AGAACAAACTATCTAAAAAG+AGG + chr1_2:71691299-71691318 None:intergenic 25.0%
!! TACAAAGTTTTACTTACACA+AGG - chr1_2:71691390-71691409 Msa0089940:intron 25.0%
!! ATTTATCATCTTTTGCCTTT+TGG - chr1_2:71691540-71691559 Msa0089940:intron 25.0%
! TTGTCAAAATCTCAACTAAA+TGG - chr1_2:71691768-71691787 Msa0089940:intron 25.0%
! TGTCAAAATCTCAACTAAAT+GGG - chr1_2:71691769-71691788 Msa0089940:intron 25.0%
!! TGACAATGAATTTCAAGTAA+TGG + chr1_2:71691856-71691875 None:intergenic 25.0%
! ATTACTTGAAATTCATTGTC+AGG - chr1_2:71691855-71691874 Msa0089940:intron 25.0%
!! GATGTTTTCTTCATTATTGA+GGG + chr1_2:71692027-71692046 None:intergenic 25.0%
! ATCATTAGATTGAATTTCCT+TGG + chr1_2:71692549-71692568 None:intergenic 25.0%
! GTATAGTACAGAAAATTGTA+AGG - chr1_2:71692879-71692898 Msa0089940:intron 25.0%
! AAATCCAACAATGGTAAATT+AGG + chr1_2:71693055-71693074 None:intergenic 25.0%
! AGATTAACAAAATCCAACAA+TGG + chr1_2:71693064-71693083 None:intergenic 25.0%
!!! TTCAAAGCATTTTAGTGTAA+CGG + chr1_2:71693294-71693313 None:intergenic 25.0%
! CTGTTATTGGAAAAATGAAA+GGG - chr1_2:71693711-71693730 Msa0089940:intron 25.0%
!!! TGTTTCCTTTCTTTCTTTTT+TGG - chr1_2:71693928-71693947 Msa0089940:five_prime_UTR 25.0%
!!! GTTTCCTTTCTTTCTTTTTT+GGG - chr1_2:71693929-71693948 Msa0089940:five_prime_UTR 25.0%
TACCACAACATTGAATTTCT+GGG + chr1_2:71688845-71688864 None:intergenic 30.0%
GTAAAGATCTTACACAAACA+TGG + chr1_2:71689088-71689107 None:intergenic 30.0%
TTGGGAAAAAAATTGAGTCT+TGG - chr1_2:71689263-71689282 Msa0089940:CDS 30.0%
TGGGAAAAAAATTGAGTCTT+GGG - chr1_2:71689264-71689283 Msa0089940:CDS 30.0%
! AGCATATTTTTCTACATGTG+TGG - chr1_2:71689333-71689352 Msa0089940:CDS 30.0%
!! TTTTGTTTGTTACATTCTGG+TGG - chr1_2:71689417-71689436 Msa0089940:CDS 30.0%
!! ATTCTTGTTGTCTACAGTTT+TGG - chr1_2:71689557-71689576 Msa0089940:intron 30.0%
AGATATACACATGTTGGATT+TGG - chr1_2:71689709-71689728 Msa0089940:intron 30.0%
!! CTTGAAGCTTTTAAAAGTGT+TGG - chr1_2:71689734-71689753 Msa0089940:CDS 30.0%
!!! TTTTAAAAGTGTTGGTGGTA+TGG - chr1_2:71689742-71689761 Msa0089940:CDS 30.0%
AGAAATAAAGAAAAGTGAGG+TGG - chr1_2:71689821-71689840 Msa0089940:CDS 30.0%
TAAGCAAAGGTTCTCTTAAA+TGG + chr1_2:71689986-71690005 None:intergenic 30.0%
AAAGATAAGTGGTCTAGATT+GGG + chr1_2:71690024-71690043 None:intergenic 30.0%
AAAAGATGGAGAAAGATAAG+TGG + chr1_2:71690035-71690054 None:intergenic 30.0%
! AAAAGTTTCTAAAGGCAACA+AGG + chr1_2:71690115-71690134 None:intergenic 30.0%
ATATACATTTCAGTGTTAGC+TGG - chr1_2:71690164-71690183 Msa0089940:CDS 30.0%
!!! TTGTCTTCTCATTCCTTTTT+TGG - chr1_2:71690189-71690208 Msa0089940:CDS 30.0%
!!! TGTCTTCTCATTCCTTTTTT+GGG - chr1_2:71690190-71690209 Msa0089940:CDS 30.0%
TATGTAGGGATGTTTGAATT+AGG - chr1_2:71690223-71690242 Msa0089940:CDS 30.0%
!!! TTCCTACTAGTTTTGATTTC+CGG - chr1_2:71690612-71690631 Msa0089940:CDS 30.0%
CATTGCATAAAGTAGAAAAC+CGG + chr1_2:71690634-71690653 None:intergenic 30.0%
CAAAAAAAGGAAGACGAAAA+AGG + chr1_2:71690707-71690726 None:intergenic 30.0%
!! CTTTTTCGTCTTCCTTTTTT+TGG - chr1_2:71690705-71690724 Msa0089940:CDS 30.0%
ATAGTCATGAAGAACATAGA+AGG + chr1_2:71690768-71690787 None:intergenic 30.0%
AGATTAATGCTGAGAAATGT+AGG - chr1_2:71690815-71690834 Msa0089940:CDS 30.0%
!! AAGCATTGAAGGAAAATTGA+TGG + chr1_2:71690939-71690958 None:intergenic 30.0%
GTTGTTAAGTTCTTTCACAT+CGG + chr1_2:71691047-71691066 None:intergenic 30.0%
!! TTCTTTGAAGCTGTCTTTAT+TGG - chr1_2:71691082-71691101 Msa0089940:intron 30.0%
TCAGATATTATTGTCTGCAT+AGG - chr1_2:71691364-71691383 Msa0089940:intron 30.0%
CAGATATTATTGTCTGCATA+GGG - chr1_2:71691365-71691384 Msa0089940:intron 30.0%
AGATATTATTGTCTGCATAG+GGG - chr1_2:71691366-71691385 Msa0089940:intron 30.0%
!! ATTTATTAGGCATTGGTAGA+AGG + chr1_2:71691427-71691446 None:intergenic 30.0%
TAGCAATTTGTGCAAAGTTA+CGG - chr1_2:71691451-71691470 Msa0089940:intron 30.0%
! TTCCTTTTATTGTGGTGTAA+GGG + chr1_2:71691510-71691529 None:intergenic 30.0%
! ATTCCTTTTATTGTGGTGTA+AGG + chr1_2:71691511-71691530 None:intergenic 30.0%
! ATTGGGATTTTATCATCACA+TGG + chr1_2:71691635-71691654 None:intergenic 30.0%
CATAATGCATGACCTTATTA+AGG - chr1_2:71691713-71691732 Msa0089940:intron 30.0%
ACCTTATTAAGGATCAGAAA+TGG - chr1_2:71691724-71691743 Msa0089940:intron 30.0%
TCCATTTCTGATCCTTAATA+AGG + chr1_2:71691728-71691747 None:intergenic 30.0%
ATTAAGGATCAGAAATGGAA+AGG - chr1_2:71691729-71691748 Msa0089940:intron 30.0%
!! TAGTTGAGATTTTGACAACT+AGG + chr1_2:71691766-71691785 None:intergenic 30.0%
GGTTAGATTTATGGAAAATC+TGG - chr1_2:71691821-71691840 Msa0089940:intron 30.0%
GATTTATGGAAAATCTGGTT+TGG - chr1_2:71691826-71691845 Msa0089940:intron 30.0%
TTGAAATTCATTGTCAGGTT+GGG - chr1_2:71691860-71691879 Msa0089940:intron 30.0%
! CGATGTTTTCTTCATTATTG+AGG + chr1_2:71692028-71692047 None:intergenic 30.0%
ATTCAAATTTCAGACATTCC+TGG - chr1_2:71692053-71692072 Msa0089940:intron 30.0%
AAACTTAGCACATATCTCAA+AGG + chr1_2:71692090-71692109 None:intergenic 30.0%
! ATATGTGCTAAGTTTTGCTA+CGG - chr1_2:71692095-71692114 Msa0089940:intron 30.0%
!! AATCACATTGTAAGCATTGA+GGG + chr1_2:71692132-71692151 None:intergenic 30.0%
ATGCATGAAAACATTGAGAA+AGG - chr1_2:71692182-71692201 Msa0089940:intron 30.0%
AAACATCGATCTTGAAAAGA+AGG + chr1_2:71692211-71692230 None:intergenic 30.0%
TTGCTATAGATTCAATGCAA+CGG + chr1_2:71692334-71692353 None:intergenic 30.0%
CATTGAATCTATAGCAAACA+AGG - chr1_2:71692337-71692356 Msa0089940:intron 30.0%
ATATAACCGAAAAAAGCTTC+CGG - chr1_2:71692397-71692416 Msa0089940:intron 30.0%
!!! ATTTTGATTAAAGCACCAGA+TGG - chr1_2:71692833-71692852 Msa0089940:intron 30.0%
GAGATTACAATGTATGATGT+TGG - chr1_2:71692857-71692876 Msa0089940:intron 30.0%
AACATACTAAGACACAACAA+TGG + chr1_2:71693231-71693250 None:intergenic 30.0%
!! AAAATGCTTTGAAACACTAC+AGG - chr1_2:71693301-71693320 Msa0089940:intron 30.0%
!! GGAATTAAAGGCATTAAGAA+AGG - chr1_2:71693610-71693629 Msa0089940:intron 30.0%
GCTGTTATTGGAAAAATGAA+AGG - chr1_2:71693710-71693729 Msa0089940:intron 30.0%
AGAAGTCTTTCATTAAGCTA+TGG - chr1_2:71693747-71693766 Msa0089940:intron 30.0%
GAAGTCTTTCATTAAGCTAT+GGG - chr1_2:71693748-71693767 Msa0089940:intron 30.0%
! GTGTAGATTTAACTTCTTCA+GGG + chr1_2:71693838-71693857 None:intergenic 30.0%
AGTTTCCTAAATGTAGCTAT+TGG - chr1_2:71693880-71693899 Msa0089940:five_prime_UTR 30.0%
CTAACCCAAAAAAGAAAGAA+AGG + chr1_2:71693936-71693955 None:intergenic 30.0%
! GTTAGTTTCTTTATGTCAAG+AGG - chr1_2:71693951-71693970 Msa0089940:five_prime_UTR 30.0%
! ACAACATTGAATTTCTGGGA+TGG + chr1_2:71688841-71688860 None:intergenic 35.0%
ATCCCAGAAATTCAATGTTG+TGG - chr1_2:71688840-71688859 Msa0089940:three_prime_UTR 35.0%
GTACCACAACATTGAATTTC+TGG + chr1_2:71688846-71688865 None:intergenic 35.0%
!! TTTGTTGTTGTTGCTTGCAA+AGG + chr1_2:71688917-71688936 None:intergenic 35.0%
! TTTCAGGTAAACCAGAAGAA+GGG + chr1_2:71689009-71689028 None:intergenic 35.0%
GAAAAAAATTGAGTCTTGGG+TGG - chr1_2:71689267-71689286 Msa0089940:CDS 35.0%
! TTTACACGGAGAGTGATTTT+GGG - chr1_2:71689298-71689317 Msa0089940:CDS 35.0%
! CAAGAATCTTTTGCCAAGTA+TGG + chr1_2:71689544-71689563 None:intergenic 35.0%
! TGCAGGTTTTCAAACTTCAA+CGG - chr1_2:71689618-71689637 Msa0089940:intron 35.0%
!!! GAAGCTTTTAAAAGTGTTGG+TGG - chr1_2:71689737-71689756 Msa0089940:CDS 35.0%
ACAGTGTAATCAGATAGTGA+AGG - chr1_2:71689794-71689813 Msa0089940:CDS 35.0%
GTTTAGTGTTAGTACTCTGT+TGG - chr1_2:71689874-71689893 Msa0089940:CDS 35.0%
CTAACAAGAGATTGTTTCCT+TGG + chr1_2:71689954-71689973 None:intergenic 35.0%
GAAAGATAAGTGGTCTAGAT+TGG + chr1_2:71690025-71690044 None:intergenic 35.0%
TCTCTTAAAGCCAAGAAACT+TGG - chr1_2:71690141-71690160 Msa0089940:CDS 35.0%
TTGAGTTACCATCTTCTTAG+AGG - chr1_2:71690281-71690300 Msa0089940:CDS 35.0%
! TCTACTTTCCTCTAAGAAGA+TGG + chr1_2:71690292-71690311 None:intergenic 35.0%
CAGATACATTTCAGACTGAT+GGG - chr1_2:71690355-71690374 Msa0089940:CDS 35.0%
AACCGGAAATCAAAACTAGT+AGG + chr1_2:71690617-71690636 None:intergenic 35.0%
!!! TTCGTCTTCCTTTTTTTGGT+TGG - chr1_2:71690709-71690728 Msa0089940:CDS 35.0%
AAAAGAGTAGAACCCTAGAA+TGG + chr1_2:71691248-71691267 None:intergenic 35.0%
TTCCCTTACACCACAATAAA+AGG - chr1_2:71691505-71691524 Msa0089940:CDS 35.0%
ACGTGCAGTGAGTTTAAATT+GGG - chr1_2:71691800-71691819 Msa0089940:intron 35.0%
CTTGAAATTCATTGTCAGGT+TGG - chr1_2:71691859-71691878 Msa0089940:intron 35.0%
TGAGAACTCTTTGATATGAG+AGG + chr1_2:71691987-71692006 None:intergenic 35.0%
! CAATCACATTGTAAGCATTG+AGG + chr1_2:71692133-71692152 None:intergenic 35.0%
CTTACAATGTGATTGCTACT+AGG - chr1_2:71692138-71692157 Msa0089940:intron 35.0%
TACGAAAAATGCTAGAGCTT+AGG + chr1_2:71692235-71692254 None:intergenic 35.0%
! TAGCATTTTTCGTAGTTGGA+AGG - chr1_2:71692241-71692260 Msa0089940:intron 35.0%
TGTAGTCTGAAGAAGGATAA+TGG + chr1_2:71692270-71692289 None:intergenic 35.0%
!!! TTTCTTCCGGAAGCTTTTTT+CGG + chr1_2:71692406-71692425 None:intergenic 35.0%
AAAAAGCTTCCGGAAGAAAA+TGG - chr1_2:71692407-71692426 Msa0089940:intron 35.0%
TCTGTAAGCATAAGCTTTCA+AGG + chr1_2:71692585-71692604 None:intergenic 35.0%
AAAGTTGCCAAATTTCAGCA+AGG - chr1_2:71692604-71692623 Msa0089940:five_prime_UTR 35.0%
AAGTTGCCAAATTTCAGCAA+GGG - chr1_2:71692605-71692624 Msa0089940:five_prime_UTR 35.0%
ATCATACCCTTGCTGAAATT+TGG + chr1_2:71692614-71692633 None:intergenic 35.0%
GATGTGCTAGTAAAGAGAAT+TGG - chr1_2:71692779-71692798 Msa0089940:intron 35.0%
TACATTGTAATCTCTCCATC+TGG + chr1_2:71692851-71692870 None:intergenic 35.0%
TCACAATTCCGAGATTGAAT+TGG - chr1_2:71692919-71692938 Msa0089940:intron 35.0%
AATTCCGAGATTGAATTGGT+TGG - chr1_2:71692923-71692942 Msa0089940:intron 35.0%
ATGGTTGCAAAACTCATAGA+TGG - chr1_2:71693004-71693023 Msa0089940:intron 35.0%
ATACCTTGTTGAAATTGCGA+AGG - chr1_2:71693027-71693046 Msa0089940:intron 35.0%
GGATCCTAATTTACCATTGT+TGG - chr1_2:71693048-71693067 Msa0089940:intron 35.0%
GGCTATTGACACATATTTGA+AGG - chr1_2:71693135-71693154 Msa0089940:intron 35.0%
TTGATTCCTTTAGCTATGTC+TGG + chr1_2:71693506-71693525 None:intergenic 35.0%
AACTAATCCGGAATATGACA+CGG - chr1_2:71693568-71693587 Msa0089940:intron 35.0%
GTTGGAAACAGTTTCAAAGA+TGG - chr1_2:71693662-71693681 Msa0089940:intron 35.0%
TGCTAAACCAAACATGGATA+AGG - chr1_2:71693688-71693707 Msa0089940:intron 35.0%
! ATAACAGCCTTATCCATGTT+TGG + chr1_2:71693698-71693717 None:intergenic 35.0%
AACATGGATAAGGCTGTTAT+TGG - chr1_2:71693698-71693717 Msa0089940:intron 35.0%
! TCAGATTCATCTGAGAGTAT+TGG - chr1_2:71693803-71693822 Msa0089940:five_prime_UTR 35.0%
! GGTGTAGATTTAACTTCTTC+AGG + chr1_2:71693839-71693858 None:intergenic 35.0%
AATCTACACCATCCAGAAAT+AGG - chr1_2:71693849-71693868 Msa0089940:five_prime_UTR 35.0%
AACTGAATTCCTCCTATTTC+TGG + chr1_2:71693864-71693883 None:intergenic 35.0%
!!! GAGATAAACCACTAGTTTTG+AGG + chr1_2:71693978-71693997 None:intergenic 35.0%
! CTTTCAGGTAAACCAGAAGA+AGG + chr1_2:71689010-71689029 None:intergenic 40.0%
! GTTTACACGGAGAGTGATTT+TGG - chr1_2:71689297-71689316 Msa0089940:CDS 40.0%
!! CTTGTTGTCTACAGTTTTGG+TGG - chr1_2:71689560-71689579 Msa0089940:intron 40.0%
TGCAACTGAAAACAGCATCT+TGG + chr1_2:71689602-71689621 None:intergenic 40.0%
!!! AAGATGCTGTTTTCAGTTGC+AGG - chr1_2:71689601-71689620 Msa0089940:intron 40.0%
CAAGAGATTGTTTCCTTGGT+CGG + chr1_2:71689950-71689969 None:intergenic 40.0%
! AGTCTGAAATGTATCTGGCT+TGG + chr1_2:71690352-71690371 None:intergenic 40.0%
! CCATCAGTCTGAAATGTATC+TGG + chr1_2:71690357-71690376 None:intergenic 40.0%
CCAGATACATTTCAGACTGA+TGG - chr1_2:71690354-71690373 Msa0089940:CDS 40.0%
CTGATGGGAACAACAATGTT+AGG - chr1_2:71690370-71690389 Msa0089940:CDS 40.0%
TGTCATCGCCAACCAAAAAA+AGG + chr1_2:71690720-71690739 None:intergenic 40.0%
GTCATGAAGAACATAGAAGG+CGG + chr1_2:71690765-71690784 None:intergenic 40.0%
TTATTGTTGCTGACCTGACT+AGG - chr1_2:71690858-71690877 Msa0089940:CDS 40.0%
TGAATGTTCAAGTCCTAGTC+AGG + chr1_2:71690874-71690893 None:intergenic 40.0%
TTGATCTAGCCACCATTCTA+GGG - chr1_2:71691233-71691252 Msa0089940:intron 40.0%
CACGTGCAGTGAGTTTAAAT+TGG - chr1_2:71691799-71691818 Msa0089940:intron 40.0%
CAAATTTCAGACATTCCTGG+TGG - chr1_2:71692056-71692075 Msa0089940:intron 40.0%
! GCTCTAGCATTTTTCGTAGT+TGG - chr1_2:71692237-71692256 Msa0089940:intron 40.0%
! TCGATGTGTCTAAAGTTGAC+TGG - chr1_2:71692366-71692385 Msa0089940:intron 40.0%
!! GACTCAAAGCCATTTTCTTC+CGG + chr1_2:71692419-71692438 None:intergenic 40.0%
! AGTTCTAACTCCATTCTGGT+TGG + chr1_2:71692441-71692460 None:intergenic 40.0%
! TTCGAGTTCTAACTCCATTC+TGG + chr1_2:71692445-71692464 None:intergenic 40.0%
AAATGTGCCAAAAGACTGGT+GGG - chr1_2:71692463-71692482 Msa0089940:intron 40.0%
! AAGTTGTTGCCTTCTGAGAA+AGG - chr1_2:71692683-71692702 Msa0089940:intron 40.0%
AGAAAGGCAGTGTTTCATGT+AGG - chr1_2:71692699-71692718 Msa0089940:intron 40.0%
ACCTCCAACCAATTCAATCT+CGG + chr1_2:71692930-71692949 None:intergenic 40.0%
ACTTGAAGGGATAAGAAAGC+CGG - chr1_2:71692955-71692974 Msa0089940:intron 40.0%
! TTTTGCAACCATCAGCTTAG+AGG + chr1_2:71692996-71693015 None:intergenic 40.0%
GATCCTTCGCAATTTCAACA+AGG + chr1_2:71693033-71693052 None:intergenic 40.0%
ATGTGTCAATAGCCCTGTAA+AGG + chr1_2:71693129-71693148 None:intergenic 40.0%
TTTCACCTTTGCTGATACCA+GGG + chr1_2:71693331-71693350 None:intergenic 40.0%
! TTTTCACCTTTGCTGATACC+AGG + chr1_2:71693332-71693351 None:intergenic 40.0%
! GAAGAGTATATGCCAGCTAA+TGG - chr1_2:71693352-71693371 Msa0089940:intron 40.0%
GAATCAAAGACCTGAGCATT+GGG - chr1_2:71693519-71693538 Msa0089940:intron 40.0%
TGGAGATGCTAAACCAAACA+TGG - chr1_2:71693682-71693701 Msa0089940:intron 40.0%
ATTAAGCTATGGGCAAGCAA+AGG - chr1_2:71693758-71693777 Msa0089940:intron 40.0%
!! GAATTCCTCCTATTTCTGGA+TGG + chr1_2:71693860-71693879 None:intergenic 40.0%
GTGAGCCAATAGCTACATTT+AGG + chr1_2:71693888-71693907 None:intergenic 40.0%
TTCTCTCTTCACCCTTCTTC+TGG - chr1_2:71688995-71689014 Msa0089940:CDS 45.0%
AATTGAGTCTTGGGTGGTGT+TGG - chr1_2:71689273-71689292 Msa0089940:CDS 45.0%
TGGAGTCAGATTTGTGTCTC+TGG - chr1_2:71689841-71689860 Msa0089940:CDS 45.0%
TTGACAGCAAACAAGGCAGA+AGG + chr1_2:71690065-71690084 None:intergenic 45.0%
CGGAATCTTGACAGCAAACA+AGG + chr1_2:71690072-71690091 None:intergenic 45.0%
CTTGATCTAGCCACCATTCT+AGG - chr1_2:71691232-71691251 Msa0089940:intron 45.0%
AGAGTAGAACCCTAGAATGG+TGG + chr1_2:71691245-71691264 None:intergenic 45.0%
CAGGTATGTTGCAAGTGAGT+TGG - chr1_2:71691339-71691358 Msa0089940:intron 45.0%
! TGGCTTTTCAGCACAGGTTA+AGG + chr1_2:71691615-71691634 None:intergenic 45.0%
! ATCACATGGCTTTTCAGCAC+AGG + chr1_2:71691621-71691640 None:intergenic 45.0%
ACCATTGGATGAGGAGCAAA+AGG - chr1_2:71692301-71692320 Msa0089940:intron 45.0%
! ACCTTTTGCTCCTCATCCAA+TGG + chr1_2:71692305-71692324 None:intergenic 45.0%
CTCGAAATGTGCCAAAAGAC+TGG - chr1_2:71692459-71692478 Msa0089940:intron 45.0%
GAAATGTGCCAAAAGACTGG+TGG - chr1_2:71692462-71692481 Msa0089940:intron 45.0%
! TCTTCAACCCACCAGTCTTT+TGG + chr1_2:71692473-71692492 None:intergenic 45.0%
GCTTTGACACATCCTCACAT+GGG + chr1_2:71692637-71692656 None:intergenic 45.0%
TGCTTTGACACATCCTCACA+TGG + chr1_2:71692638-71692657 None:intergenic 45.0%
GTGAGGATGTGTCAAAGCAT+CGG - chr1_2:71692639-71692658 Msa0089940:intron 45.0%
GAAACACTGCCTTTCTCAGA+AGG + chr1_2:71692695-71692714 None:intergenic 45.0%
GAGAATTGGTCAGCAACTAG+AGG - chr1_2:71692793-71692812 Msa0089940:intron 45.0%
AATTGGTCAGCAACTAGAGG+AGG - chr1_2:71692796-71692815 Msa0089940:intron 45.0%
TCCGAGATTGAATTGGTTGG+AGG - chr1_2:71692926-71692945 Msa0089940:intron 45.0%
GAGATTGAATTGGTTGGAGG+TGG - chr1_2:71692929-71692948 Msa0089940:intron 45.0%
CTTGAAGGGATAAGAAAGCC+GGG - chr1_2:71692956-71692975 Msa0089940:intron 45.0%
TTGAAGGGATAAGAAAGCCG+GGG - chr1_2:71692957-71692976 Msa0089940:intron 45.0%
! GAGGCATCTGATAAAATCCC+CGG + chr1_2:71692977-71692996 None:intergenic 45.0%
ATCAGATGCCTCTAAGCTGA+TGG - chr1_2:71692985-71693004 Msa0089940:intron 45.0%
CTGTAAAGGCCATCATGAGA+CGG + chr1_2:71693115-71693134 None:intergenic 45.0%
GTCTCATGATGGCCTTTACA+GGG - chr1_2:71693114-71693133 Msa0089940:intron 45.0%
GCTTTCTGCAATCCATTAGC+TGG + chr1_2:71693367-71693386 None:intergenic 45.0%
ACCTGCACAATTACACGTGT+CGG + chr1_2:71693434-71693453 None:intergenic 45.0%
AGCACTCCAGACATAGCTAA+AGG - chr1_2:71693497-71693516 Msa0089940:intron 45.0%
GGAATCAAAGACCTGAGCAT+TGG - chr1_2:71693518-71693537 Msa0089940:intron 45.0%
AAGGTCGGGAACAACTAATC+CGG - chr1_2:71693556-71693575 Msa0089940:intron 45.0%
AATCCGGAATATGACACGGA+TGG - chr1_2:71693572-71693591 Msa0089940:intron 45.0%
TTGAGACAAAGCAACGGAGT+TGG - chr1_2:71693644-71693663 Msa0089940:intron 45.0%
GGAGGACATGGTGAAAATAG+TGG - chr1_2:71693779-71693798 Msa0089940:five_prime_UTR 45.0%
CTACACCATCCAGAAATAGG+AGG - chr1_2:71693852-71693871 Msa0089940:five_prime_UTR 45.0%
CAAGAGGACCTCAAAACTAG+TGG - chr1_2:71693967-71693986 Msa0089940:five_prime_UTR 45.0%
!! GGGTGGTGTTGGTGTTTACA+CGG - chr1_2:71689284-71689303 Msa0089940:CDS 50.0%
!! CGGAGAGTGATTTTGGGTAG+TGG - chr1_2:71689304-71689323 Msa0089940:CDS 50.0%
CTATGTTCCCTGAGCTGACT+CGG - chr1_2:71689897-71689916 Msa0089940:CDS 50.0%
GAGATTGTTTCCTTGGTCGG+CGG + chr1_2:71689947-71689966 None:intergenic 50.0%
ACATCGGTCGTACATGAGCA+TGG + chr1_2:71691031-71691050 None:intergenic 50.0%
ACAAGATGCCTTTCATGCGC+AGG - chr1_2:71691320-71691339 Msa0089940:intron 50.0%
GCAACATACCTGCGCATGAA+AGG + chr1_2:71691331-71691350 None:intergenic 50.0%
! AGGTGTGCAGCAGAGTATCT+TGG - chr1_2:71692158-71692177 Msa0089940:intron 50.0%
!! GGCTTTGAGTCCAACCAGAA+TGG - chr1_2:71692428-71692447 Msa0089940:intron 50.0%
! CAAGGGTATGATCCCATGTG+AGG - chr1_2:71692622-71692641 Msa0089940:five_prime_UTR 50.0%
TCAGCAACTAGAGGAGGCTT+CGG - chr1_2:71692802-71692821 Msa0089940:intron 50.0%
TTGGAGGTGGCGAACTTGAA+GGG - chr1_2:71692942-71692961 Msa0089940:intron 50.0%
ATCTCTCGTCCGTCTCATGA+TGG - chr1_2:71693103-71693122 Msa0089940:intron 50.0%
CGTCTCATGATGGCCTTTAC+AGG - chr1_2:71693113-71693132 Msa0089940:intron 50.0%
! CTCGTTTTGCACTGCATGCA+AGG + chr1_2:71693405-71693424 None:intergenic 50.0%
TGCATGCAGTGCAAAACGAG+AGG - chr1_2:71693405-71693424 Msa0089940:intron 50.0%
ACCGACACGTGTAATTGTGC+AGG - chr1_2:71693430-71693449 Msa0089940:intron 50.0%
GCAGGTACTACATTTCGAGC+AGG - chr1_2:71693448-71693467 Msa0089940:intron 50.0%
GCACCATCCGTGTCATATTC+CGG + chr1_2:71693578-71693597 None:intergenic 50.0%
GGAATATGACACGGATGGTG+CGG - chr1_2:71693577-71693596 Msa0089940:intron 50.0%
GAATATGACACGGATGGTGC+GGG - chr1_2:71693578-71693597 Msa0089940:intron 50.0%
AATATGACACGGATGGTGCG+GGG - chr1_2:71693579-71693598 Msa0089940:intron 50.0%
GGGGACAGCTGAGGAATTAA+AGG - chr1_2:71693598-71693617 Msa0089940:intron 50.0%
GCGTCGTTGAGACAAAGCAA+CGG - chr1_2:71693638-71693657 Msa0089940:intron 50.0%
AAGCTATGGGCAAGCAAAGG+AGG - chr1_2:71693761-71693780 Msa0089940:intron 50.0%
!! TCAAAGGCACTTGCACCACC+AGG + chr1_2:71692074-71692093 None:intergenic 55.0%
GTTGGAGGTGGCGAACTTGA+AGG - chr1_2:71692941-71692960 Msa0089940:intron 55.0%
!! GAAACACTACAGGAGCACCC+TGG - chr1_2:71693311-71693330 Msa0089940:intron 55.0%
GAGCACCCTGGTATCAGCAA+AGG - chr1_2:71693323-71693342 Msa0089940:intron 55.0%
!! GACCTGAGCATTGGGTCCAA+CGG - chr1_2:71693527-71693546 Msa0089940:intron 55.0%
TACCGTTGGACCCAATGCTC+AGG + chr1_2:71693532-71693551 None:intergenic 55.0%
TTGGGTCCAACGGTAGCTCA+AGG - chr1_2:71693537-71693556 Msa0089940:intron 55.0%
GTCCAACGGTAGCTCAAGGT+CGG - chr1_2:71693541-71693560 Msa0089940:intron 55.0%
TCCAACGGTAGCTCAAGGTC+GGG - chr1_2:71693542-71693561 Msa0089940:intron 55.0%
TGGGCAAGCAAAGGAGGACA+TGG - chr1_2:71693767-71693786 Msa0089940:intron 55.0%
GTTTCCTTGGTCGGCGGCAA+AGG + chr1_2:71689941-71689960 None:intergenic 60.0%
GGTCAGAACCGCTGCGTCAT+CGG - chr1_2:71693469-71693488 Msa0089940:intron 60.0%
GTCAGAACCGCTGCGTCATC+GGG - chr1_2:71693470-71693489 Msa0089940:intron 60.0%
GCTAGTACCCGATGACGCAG+CGG + chr1_2:71693480-71693499 None:intergenic 60.0%
TCCCGACCTTGAGCTACCGT+TGG + chr1_2:71693546-71693565 None:intergenic 60.0%
TTGGTCGGCGGCAAAGGCCA+CGG + chr1_2:71689935-71689954 None:intergenic 65.0%
GGGCGCACCGAGTCAGCTCA+GGG + chr1_2:71689907-71689926 None:intergenic 70.0%
!! CTGAGCTGACTCGGTGCGCC+CGG - chr1_2:71689906-71689925 Msa0089940:CDS 70.0%
CGGCAAAGGCCACGGAGTCC+GGG + chr1_2:71689927-71689946 None:intergenic 70.0%
GCGGCAAAGGCCACGGAGTC+CGG + chr1_2:71689928-71689947 None:intergenic 70.0%
GTGGCCTTTGCCGCCGACCA+AGG - chr1_2:71689934-71689953 Msa0089940:CDS 70.0%
GGATGGTGCGGGGACAGCTG+AGG - chr1_2:71693589-71693608 Msa0089940:intron 70.0%
CGGGCGCACCGAGTCAGCTC+AGG + chr1_2:71689908-71689927 None:intergenic 75.0%
!! CTCGGTGCGCCCGGACTCCG+TGG - chr1_2:71689915-71689934 Msa0089940:CDS 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 71688796 71694075 71688796 ID=Msa0089940;Name=Msa0089940
chr1_2 mRNA 71688796 71694075 71688796 ID=Msa0089940-mRNA-1;Parent=Msa0089940;Name=Msa0089940-mRNA-1;_AED=0.03;_eAED=0.03;_QI=396|1|0.8|1|0.75|0.6|5|186|625
chr1_2 exon 71688796 71689548 71688796 ID=Msa0089940-mRNA-1:exon:24742;Parent=Msa0089940-mRNA-1
chr1_2 exon 71689715 71690890 71689715 ID=Msa0089940-mRNA-1:exon:24741;Parent=Msa0089940-mRNA-1
chr1_2 exon 71691460 71691529 71691460 ID=Msa0089940-mRNA-1:exon:24740;Parent=Msa0089940-mRNA-1
chr1_2 exon 71692480 71692641 71692480 ID=Msa0089940-mRNA-1:exon:24739;Parent=Msa0089940-mRNA-1
chr1_2 exon 71693777 71694075 71693777 ID=Msa0089940-mRNA-1:exon:24738;Parent=Msa0089940-mRNA-1
chr1_2 five_prime_UTR 71693777 71694075 71693777 ID=Msa0089940-mRNA-1:five_prime_utr;Parent=Msa0089940-mRNA-1
chr1_2 five_prime_UTR 71692545 71692641 71692545 ID=Msa0089940-mRNA-1:five_prime_utr;Parent=Msa0089940-mRNA-1
chr1_2 CDS 71692480 71692544 71692480 ID=Msa0089940-mRNA-1:cds;Parent=Msa0089940-mRNA-1
chr1_2 CDS 71691460 71691529 71691460 ID=Msa0089940-mRNA-1:cds;Parent=Msa0089940-mRNA-1
chr1_2 CDS 71689715 71690890 71689715 ID=Msa0089940-mRNA-1:cds;Parent=Msa0089940-mRNA-1
chr1_2 CDS 71688982 71689548 71688982 ID=Msa0089940-mRNA-1:cds;Parent=Msa0089940-mRNA-1
chr1_2 three_prime_UTR 71688796 71688981 71688796 ID=Msa0089940-mRNA-1:three_prime_utr;Parent=Msa0089940-mRNA-1
Gene Sequence

>Msa0089940

ATGAAGTTTATGAAACTTGGTTCCAAGCCAGATACATTTCAGACTGATGGGAACAACAATGTTAGGTATGTTGCAAGTGAGTTGGCATCAGATATTATTGTCTGCATAGGGGATACAAAGTTTTACTTACACAAGTTTCCTCTCATATCAAAGAGTTCTCACTTACAGAAGTTGATCTCCCTCAATAATGAAGAAAACATCGACGAAATTCAAATTTCAGACATTCCTGGTGGTGCAAGTGCCTTTGAGATATGTGCTAAGTTTTGCTACGGCATGACTGTTACCCTCAATGCTTACAATGTGATTGCTACTAGGTGTGCAGCAGAGTATCTTGGAATGCATGAAAACATTGAGAAAGGAAACCTTCTTTTCAAGATCGATGTTTTCCTAAGCTCTAGCATTTTTCGTAGTTGGAAGGATTCCATTATCCTTCTTCAGACTACAAAGTCTTTGTCACCATTGGATGAGGAGCAAAAGGTTGTCAACCGTTGCATTGAATCTATAGCAAACAAGGCATGCGTCGATGTGTCTAAAGTTGACTGGTCTTACACATATAACCGAAAAAAGCTTCCGGAAGAAAATGGCTTTGAGTCCAACCAGAATGGAGTTAGAACTCGAAATGTGCCAAAAGACTGGTGGGTTGAAGATTTATGCGAACTTGAAGTTGACATGTACAAATCTGTTATAACAAATATCAAAACCAAGGAAATTCAATCTAATGATGTAATTGGTGAAGCCTTGAAAGCTTATGCTTACAGAAAGTTGCCAAATTTCAGCAAGGGTATGATCCCATGTGAGGATGTGTCAAAGCATCGGTTAATAGTTGAAACTATTGTGAAGTTGTTGCCTTCTGAGAAAGGCAGTGTTTCATGTAGGTTCTTAGTCAAGTTATTGAAAGCTGCGATTTTTGTAGAATCAGAAGATAAGATCAGAGATGTGCTAGTAAAGAGAATTGGTCAGCAACTAGAGGAGGCTTCGGTAAACGATATTTTGATTAAAGCACCAGATGGAGAGATTACAATGTATGATGTTGGTATAGTACAGAAAATTGTAAGGGAGTTTCTTATGAAAGATCACAATTCCGAGATTGAATTGGTTGGAGGTGGCGAACTTGAAGGGATAAGAAAGCCGGGGATTTTATCAGATGCCTCTAAGCTGATGGTTGCAAAACTCATAGATGGATACCTTGTTGAAATTGCGAAGGATCCTAATTTACCATTGTTGGATTTTGTTAATCTTGCTGAGTTAGTTTCTAGCATCTCTCGTCCGTCTCATGATGGCCTTTACAGGGCTATTGACACATATTTGAAGGAGCACCCTGGTATCAGCAAAGGTGAAAAGAAGAGTATATGCCAGCTAATGGATTGCAGAAAGCTATCTGTTGATGCATCCTTGCATGCAGTGCAAAACGAGAGGCTACCGACACGTGTAATTGTGCAGGTACTACATTTCGAGCAGGTCAGAACCGCTGCGTCATCGGGTACTAGCACTCCAGACATAGCTAAAGGAATCAAAGACCTGAGCATTGGGTCCAACGGTAGCTCAAGGTCGGGAACAACTAATCCGGAATATGACACGGATGGTGCGGGGACAGCTGAGGAATTAAAGGCATTAAGAAAGGAACTTGCGTCGTTGAGACAAAGCAACGGAGTTGGAAACAGTTTCAAAGATGGAGATGCTAAACCAAACATGGATAAGGCTGTTATTGGAAAAATGAAAGGGTTGTTGAAGTCAAAGAAGTCTTTCATTAAGCTATGGGCAAGCAAAGGAGGACATGGTGAAAATAGTGGCTCAGATTCATCTGAGAGTATTGGTTCTGTTAACCCTGAAGAAGTTAAATCTACACCATCCAGAAATAGGAGGAATTCAGTTTCCTAA
Protein sequence

>Msa0089940

MKFMKLGSKPDTFQTDGNNNVRYVASELASDIIVCIGDTKFYLHKFPLISKSSHLQKLISLNNEENIDEIQISDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDSIILLQTTKSLSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSKGMIPCEDVSKHRLIVETIVKLLPSEKGSVSCRFLVKLLKAAIFVESEDKIRDVLVKRIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKPGILSDASKLMVAKLIDGYLVEIAKDPNLPLLDFVNLAELVSSISRPSHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGNSFKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEEVKSTPSRNRRNSVS*