AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0707260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0707260 MtrunA17_Chr8g0388451 98.204 891 16 0 38 928 1 891 0.0 1823
Msa0707260 MtrunA17_Chr3g0102561 87.805 82 7 3 202 282 17 96 2.09e-33 124
Msa0707260 MtrunA17_Chr3g0104521 30.855 269 166 7 530 791 80 335 4.14e-27 116
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0707260 AT4G14700.1 66.362 767 214 10 167 927 81 809 0.0 1005
Msa0707260 AT4G12620.1 70.774 698 185 6 234 927 131 813 0.0 994
Msa0707260 AT1G07270.1 25.750 400 280 11 526 918 109 498 9.05e-31 128
Msa0707260 AT1G07270.2 28.616 318 211 10 526 836 109 417 1.53e-30 127
Msa0707260 AT2G29680.2 24.877 406 276 12 526 918 112 501 3.01e-27 117

Find 242 sgRNAs with CRISPR-Local

Find 591 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGATGAATCTGGCGATTT+TGG 0.133439 4_4:-80493700 None:intergenic
CCATTCTTACATTAGATATT+TGG 0.155630 4_4:-80501655 None:intergenic
GTTAGTTACCGACTGGTTTC+TGG 0.202474 4_4:-80497245 None:intergenic
TGAAGCTGCTGATAATTATA+TGG 0.208304 4_4:-80497663 None:intergenic
CTGCACAAGGGACGGTTCTT+TGG 0.215974 4_4:+80496431 Msa0707260:CDS
AGAAGCTCCAATGGAGAAAT+TGG 0.221785 4_4:-80493261 None:intergenic
CGCCCAACAGAAGTCTCTTC+TGG 0.247491 4_4:-80494456 None:intergenic
CTCTATATTCACGGTGTTCC+GGG 0.266627 4_4:+80496736 Msa0707260:CDS
CCTCTATATTCACGGTGTTC+CGG 0.288739 4_4:+80496735 Msa0707260:CDS
GTCATATATGAAGCATTAAA+TGG 0.289669 4_4:+80497097 Msa0707260:CDS
CTTCAGGTTGCAGCTATATC+AGG 0.290038 4_4:+80497867 Msa0707260:intron
TTTACAGATTTCGATGAATC+TGG 0.295754 4_4:-80493709 None:intergenic
AACCTACATTCCTCCACTTC+TGG 0.299054 4_4:-80494027 None:intergenic
CCGATTCTTCTCCCTCTTCT+CGG 0.303926 4_4:-80493517 None:intergenic
GAAGCCATTGGAACGAGATT+TGG 0.307436 4_4:-80493328 None:intergenic
CTAGCTTTGGCATACTCCTT+AGG 0.308499 4_4:-80495917 None:intergenic
ATCTCCCTCATTGCTAGCTT+TGG 0.313313 4_4:-80495930 None:intergenic
TTCTTACCCTTCGGCGGCTT+TGG 0.317699 4_4:-80494207 None:intergenic
GGAGATCAATGGTCTGAAAT+TGG 0.328776 4_4:+80496964 Msa0707260:CDS
GGGAGATTGAAGAAGCTTCT+TGG 0.333604 4_4:-80493356 None:intergenic
AAAGAATTCCAGAGCATATA+AGG 0.339598 4_4:+80496474 Msa0707260:CDS
ATACCTGCAGCAACATTATC+AGG 0.340644 4_4:-80497969 None:intergenic
TTTGTAGAAGGGAAGAAAAC+TGG 0.345764 4_4:+80497166 Msa0707260:CDS
CTAAATGAGAGGTTTGTAGA+AGG 0.346073 4_4:+80497154 Msa0707260:CDS
CTATGTATTACACATGTATT+AGG 0.346172 4_4:+80501822 Msa0707260:three_prime_UTR
ATTGAGTGTGATAGTTGTTT+AGG 0.355173 4_4:+80494078 Msa0707260:CDS
ATCTGTTGTATGTTGGTCCT+TGG 0.363333 4_4:+80501790 Msa0707260:three_prime_UTR
TGAGATTCGGCAACGAGATT+GGG 0.367135 4_4:-80493478 None:intergenic
TTGATCTCCACGAAACAGTA+TGG 0.382365 4_4:-80496950 None:intergenic
CCACATATCCAATCCCCTTC+AGG 0.385042 4_4:-80494144 None:intergenic
GCTGAATTGAAGAAGAGAAA+TGG 0.386079 4_4:+80493760 Msa0707260:CDS
TAGCTTTGGCATACTCCTTA+GGG 0.393164 4_4:-80495916 None:intergenic
TTGAGATTCGGCAACGAGAT+TGG 0.395152 4_4:-80493479 None:intergenic
TATTTCTGACAATCAATGTC+TGG 0.396034 4_4:+80496705 Msa0707260:CDS
TTTCAACTAACTTGAATATG+AGG 0.396989 4_4:-80499343 None:intergenic
ATAAGTCTTACCCAACTTGC+AGG 0.400447 4_4:-80500397 None:intergenic
AGAGTGACGGTGACGAAGAC+TGG 0.402154 4_4:+80496208 Msa0707260:CDS
AGGAGATGCACGCCGTGCTT+TGG 0.412726 4_4:+80497887 Msa0707260:CDS
GGAGATTGAAGAAGCTTCTT+GGG 0.412877 4_4:-80493355 None:intergenic
CTAACAAGCTTCTTACCCTT+CGG 0.416592 4_4:-80494216 None:intergenic
GCTATATCGGACCAACGATT+TGG 0.417826 4_4:+80494503 Msa0707260:CDS
TACATAATTGTTACCATCTC+CGG 0.421160 4_4:+80501742 Msa0707260:three_prime_UTR
GAAGCTCCAATGGAGAAATT+GGG 0.421607 4_4:-80493260 None:intergenic
TGAGAATTGTGAACGGAGGT+TGG 0.424141 4_4:-80493389 None:intergenic
AGCTGCGAGCTAGGGTTTGA+TGG 0.426652 4_4:-80493295 None:intergenic
GAAATTGGGGATGAGTATAT+AGG 0.427197 4_4:-80493246 None:intergenic
AAAACGGTTGTTACAAGAGC+TGG 0.428477 4_4:+80493877 Msa0707260:CDS
GAAGCTGCTGATAATTATAT+GGG 0.430667 4_4:-80497662 None:intergenic
TTTGCGTGGAGCTGCGAGCT+AGG 0.431875 4_4:-80493304 None:intergenic
ATTTGAGCAGAGAGCTATAT+CGG 0.433378 4_4:+80494490 Msa0707260:CDS
TTCTTTGGACTTCAGAAGAT+AGG 0.436400 4_4:+80496446 Msa0707260:CDS
ATGATATCCTCCTGCAAGTT+GGG 0.437262 4_4:+80500387 Msa0707260:CDS
CTCATCCCCAATTTCTCCAT+TGG 0.438681 4_4:+80493254 Msa0707260:CDS
AGCAATGGTGAAGTGTTTCC+TGG 0.439086 4_4:+80500362 Msa0707260:CDS
GAGCTTTACAAAACAGGAAT+GGG 0.441059 4_4:+80499915 Msa0707260:CDS
CCAAATATCTAATGTAAGAA+TGG 0.441327 4_4:+80501655 Msa0707260:exon
CGGAGCGAACGAAACCTTAA+GGG 0.442571 4_4:-80493794 None:intergenic
TCCGACGTCGCCGGATCAAT+CGG 0.442884 4_4:+80493813 Msa0707260:CDS
GACGGCGGTGAATTTGAAGT+TGG 0.443655 4_4:+80493952 Msa0707260:CDS
GGGCGTTGCCTCTATATTCA+CGG 0.455755 4_4:+80496727 Msa0707260:CDS
CATTCCAAGCTAATTGTGAT+AGG 0.457837 4_4:+80497391 Msa0707260:CDS
ATCATTTCGAGTCGCCTCAA+TGG 0.464299 4_4:+80497690 Msa0707260:CDS
ACGGCGGTGAATTTGAAGTT+GGG 0.465132 4_4:+80493953 Msa0707260:CDS
CTTACCTATCACAATTAGCT+TGG 0.465486 4_4:-80497395 None:intergenic
AAGATGTTCCTGAAGGGGAT+TGG 0.466368 4_4:+80494136 Msa0707260:CDS
TCTGTTGTATGTTGGTCCTT+GGG 0.468732 4_4:+80501791 Msa0707260:three_prime_UTR
GTGCACGAGCTTTACAAAAC+AGG 0.469313 4_4:+80499909 Msa0707260:CDS
TGATTGTTGAATTTGAGATT+CGG 0.470559 4_4:-80493491 None:intergenic
CATCAAACCATACTGTTTCG+TGG 0.472974 4_4:+80496943 Msa0707260:CDS
TCGGAGCGAACGAAACCTTA+AGG 0.473564 4_4:-80493795 None:intergenic
TTTCTACAAGGTAAAGACTT+AGG 0.474900 4_4:-80496554 None:intergenic
TTGTGAGACCTTATATGCTC+TGG 0.474919 4_4:-80496482 None:intergenic
TTCTTAGTTTCCGATTGATC+CGG 0.476110 4_4:-80493823 None:intergenic
GCCCAACAGAAGTCTCTTCT+GGG 0.476671 4_4:-80494455 None:intergenic
ATACGAGGAAGTAACTTCTC+TGG 0.476939 4_4:-80497603 None:intergenic
TTCGTTCGCTCCGACGTCGC+CGG 0.480213 4_4:+80493804 Msa0707260:CDS
CCTGAAGGGGATTGGATATG+TGG 0.480446 4_4:+80494144 Msa0707260:CDS
TGGGAAGGGAGATTCCCTTA+AGG 0.483741 4_4:+80493780 Msa0707260:CDS
CTGAATTGAAGAAGAGAAAT+GGG 0.485254 4_4:+80493761 Msa0707260:CDS
GAGTGTGATAGTTGTTTAGG+TGG 0.490466 4_4:+80494081 Msa0707260:CDS
TCATGTCTCTGCGGCAGCAA+TGG 0.493304 4_4:+80500347 Msa0707260:CDS
TGGTCTGAAATTGGCTTCAC+CGG 0.494433 4_4:+80496973 Msa0707260:CDS
TTCTGTACAATATTCTTGAC+TGG 0.495175 4_4:+80497356 Msa0707260:CDS
GCAGCTACTGGTGTCGGGTA+CGG 0.495197 4_4:+80494421 Msa0707260:CDS
TAAATGAGAGGTTTGTAGAA+GGG 0.497183 4_4:+80497155 Msa0707260:CDS
ATTCACGGTGTTCCGGGCAC+TGG 0.498438 4_4:+80496742 Msa0707260:CDS
AACAATGCAGTTGGCAATGA+CGG 0.500318 4_4:+80500322 Msa0707260:intron
GTGGCACAGTTTCAAACGCT+TGG 0.500569 4_4:+80495988 Msa0707260:CDS
GTTACAAGAGCTGGGAGAAA+AGG 0.500757 4_4:+80493886 Msa0707260:CDS
AAAGCCTCTGGATGCCCATT+CGG 0.503391 4_4:-80497632 None:intergenic
GGATGGCAGCTACTGGTGTC+GGG 0.503839 4_4:+80494416 Msa0707260:CDS
TTCACCTTGTAAATATTCTC+CGG 0.504027 4_4:-80496992 None:intergenic
CCGAGAAGAGGGAGAAGAAT+CGG 0.504286 4_4:+80493517 Msa0707260:CDS
GCAGCTAACTGATGGCTTGT+CGG 0.504655 4_4:-80496315 None:intergenic
TGAGGTCAAGGTTGAGAAAA+CGG 0.504688 4_4:+80493861 Msa0707260:CDS
ATCTGTGAGGGTCGTAAGAT+GGG 0.506846 4_4:+80494168 Msa0707260:CDS
CCTCGTATATCAAGCCGAAT+GGG 0.511380 4_4:+80497618 Msa0707260:CDS
GATAGTACCTTGCCAGTGCC+CGG 0.512164 4_4:-80496754 None:intergenic
ATCCCAGAAGAGACTTCTGT+TGG 0.512492 4_4:+80494453 Msa0707260:CDS
TCAAGACGAGATTTCGCAGC+TGG 0.512532 4_4:-80493553 None:intergenic
TTGCGTGGAGCTGCGAGCTA+GGG 0.512598 4_4:-80493303 None:intergenic
CGGAAACTAAGAAGAGAAAG+AGG 0.512657 4_4:+80493833 Msa0707260:CDS
GATCTGTGAGGGTCGTAAGA+TGG 0.515072 4_4:+80494167 Msa0707260:CDS
TTGAAGTCAGAAGTTGATGC+AGG 0.515204 4_4:+80496917 Msa0707260:CDS
ATTTCTGACAATCAATGTCT+GGG 0.516051 4_4:+80496706 Msa0707260:CDS
AGCTTGGAATGTGGCTTGGT+TGG 0.517458 4_4:-80497379 None:intergenic
CAAATATATCAATTCCATTG+AGG 0.517649 4_4:-80497704 None:intergenic
TGGAGCAAATGCAATTTCAT+CGG 0.518476 4_4:-80493680 None:intergenic
TACTGTTTCGTGGAGATCAA+TGG 0.518500 4_4:+80496953 Msa0707260:CDS
GATCCTGATAATGTTGCTGC+AGG 0.521500 4_4:+80497966 Msa0707260:CDS
TACAAGAAAGTTGTTTATGA+CGG 0.522606 4_4:+80493934 Msa0707260:CDS
GCATTAAATGGACACAGGGT+TGG 0.523201 4_4:+80497109 Msa0707260:CDS
AAAGAGGAAGAATGAGGTCA+AGG 0.524216 4_4:+80493849 Msa0707260:CDS
GGTAAGGAATGAGGAGTGAG+AGG 0.524682 4_4:-80493412 None:intergenic
CAAACCTCTCATTTAGCAAA+CGG 0.525477 4_4:-80497147 None:intergenic
TAACTTGAATATGAGGTGCT+TGG 0.525790 4_4:-80499336 None:intergenic
ATGGGGCAAAGCAAAGCCTC+TGG 0.529383 4_4:-80497644 None:intergenic
AGCGTTTGAAACTGTGCCAC+TGG 0.529464 4_4:-80495985 None:intergenic
TCAACATACTTATTTCTACA+AGG 0.530757 4_4:-80496566 None:intergenic
TTGAAGAAGAGAAATGGGAA+GGG 0.532289 4_4:+80493766 Msa0707260:CDS
GCTCGTGCACCATAGCTGTC+AGG 0.532743 4_4:-80499896 None:intergenic
TTTGCAGTCTCTCAGCGAAA+AGG 0.532801 4_4:-80501616 None:intergenic
CGTGGATCTACGTGTAGGTA+AGG 0.533392 4_4:-80493428 None:intergenic
CTCGATGTTGGCCAAATCGT+TGG 0.533909 4_4:-80494514 None:intergenic
TGGATGGCAGCTACTGGTGT+CGG 0.533932 4_4:+80494415 Msa0707260:CDS
ATCTGTAAAGAAGAGGAAGC+AGG 0.534383 4_4:+80493723 Msa0707260:CDS
GAATGTGTGAGAAGCTCCAA+TGG 0.536796 4_4:-80493270 None:intergenic
CGAGCTTTACAAAACAGGAA+TGG 0.537464 4_4:+80499914 Msa0707260:CDS
CTGTTGCATCCCACAAAAGA+GGG 0.540002 4_4:+80501856 Msa0707260:three_prime_UTR
AATTAGCTTGGAATGTGGCT+TGG 0.540690 4_4:-80497383 None:intergenic
CGGTGTTCCGGGCACTGGCA+AGG 0.541081 4_4:+80496747 Msa0707260:CDS
ATCCAGAAGTGGAGGAATGT+AGG 0.542570 4_4:+80494025 Msa0707260:CDS
GAGATTCGGCAACGAGATTG+GGG 0.543738 4_4:-80493477 None:intergenic
TAAATGGACACAGGGTTGGA+TGG 0.543748 4_4:+80497113 Msa0707260:CDS
GTGAAGCAGGTGCCAAGCAC+AGG 0.543759 4_4:+80500636 Msa0707260:CDS
AGTGTGATAGTTGTTTAGGT+GGG 0.547500 4_4:+80494082 Msa0707260:CDS
CCTGTTGCATCCCACAAAAG+AGG 0.550274 4_4:+80501855 Msa0707260:three_prime_UTR
CATGATATCCTCCTGCAAGT+TGG 0.553301 4_4:+80500386 Msa0707260:CDS
CCGGAACACCGTGAATATAG+AGG 0.553353 4_4:-80496735 None:intergenic
CATCGAAATCTGTAAAGAAG+AGG 0.553381 4_4:+80493716 Msa0707260:CDS
GGCTTCAATCAAGTGATCTG+TGG 0.554304 4_4:+80494253 Msa0707260:CDS
TCCTCGTATATCAAGCCGAA+TGG 0.555101 4_4:+80497617 Msa0707260:CDS
TTCTTGGGAGTTGAAGCCAT+TGG 0.556223 4_4:-80493340 None:intergenic
GGGATGATGTTTATGTGAAG+AGG 0.559397 4_4:+80493974 Msa0707260:CDS
CTTCATAATAGTACCGGAGA+TGG 0.559807 4_4:-80501755 None:intergenic
GCTTCAATCAAGTGATCTGT+GGG 0.560115 4_4:+80494254 Msa0707260:CDS
TGCAGGAGGATATCATGTCC+AGG 0.562882 4_4:-80500380 None:intergenic
GAAGAGAAAGAGGAAGAATG+AGG 0.565359 4_4:+80493843 Msa0707260:CDS
AACAATCAACTCCGAGAAGA+GGG 0.566074 4_4:+80493506 Msa0707260:CDS
AGCTCTCTGCTCAAATTATG+TGG 0.566453 4_4:-80494483 None:intergenic
TTCATACTGCAGCTAACTGA+TGG 0.566543 4_4:-80496323 None:intergenic
ATTGAAGAAGAGAAATGGGA+AGG 0.568468 4_4:+80493765 Msa0707260:CDS
TTGGATATGTGGGATCTGTG+AGG 0.570339 4_4:+80494155 Msa0707260:CDS
TGTTAGCATCTGTTGTATGT+TGG 0.570381 4_4:+80501783 Msa0707260:three_prime_UTR
ACAATCCATCACCTCGATGT+TGG 0.575437 4_4:-80494526 None:intergenic
CTCTCCGTTTGCTAAATGAG+AGG 0.575524 4_4:+80497143 Msa0707260:CDS
AGGGAAGAAAACTGGAGAAG+AGG 0.577588 4_4:+80497174 Msa0707260:CDS
TCCCAGAAGAGACTTCTGTT+GGG 0.577921 4_4:+80494454 Msa0707260:CDS
AAGAAGTGGATGGCAGCTAC+TGG 0.578137 4_4:+80494409 Msa0707260:CDS
GTTGTATGTTGGTCCTTGGG+TGG 0.579846 4_4:+80501794 Msa0707260:three_prime_UTR
CGTTGAAAGATGTTCCTGAA+GGG 0.581179 4_4:+80494130 Msa0707260:CDS
AAATCCAAATCTCGTTCCAA+TGG 0.581999 4_4:+80493324 Msa0707260:CDS
TCCGATTGATCCGGCGACGT+CGG 0.582582 4_4:-80493814 None:intergenic
TGTGGGCTGCTCGCATTGAG+AGG 0.583937 4_4:+80494271 Msa0707260:CDS
ACTGGTCTTCATAATAGTAC+CGG 0.584777 4_4:-80501761 None:intergenic
TATGCCAAAGCTAGCAATGA+GGG 0.585809 4_4:+80495926 Msa0707260:CDS
TGAGAGGTGAGAATTGTGAA+CGG 0.585848 4_4:-80493396 None:intergenic
ATTAGATATTTGGACAGCCA+AGG 0.589801 4_4:-80501645 None:intergenic
GAACGAGATTTGGATTTGCG+TGG 0.590028 4_4:-80493318 None:intergenic
TTGCTATGTCATGATCCCTA+AGG 0.591823 4_4:+80495901 Msa0707260:CDS
TTGTTAGAACAATGCGTCAG+AGG 0.591921 4_4:+80494232 Msa0707260:CDS
CCGTTGAAAGATGTTCCTGA+AGG 0.592540 4_4:+80494129 Msa0707260:CDS
CTGAAGGGGATTGGATATGT+GGG 0.593658 4_4:+80494145 Msa0707260:CDS
GAGACTGCAAAGATCTACCT+TGG 0.593824 4_4:+80501628 Msa0707260:CDS
ACACAGGGTTGGATGGAAAG+AGG 0.594099 4_4:+80497120 Msa0707260:CDS
AGGAAAGGGACTTGTTTGCA+TGG 0.594820 4_4:+80499282 Msa0707260:intron
ACAAGCTTCTTACCCTTCGG+CGG 0.596059 4_4:-80494213 None:intergenic
CAACAATCAACTCCGAGAAG+AGG 0.596926 4_4:+80493505 Msa0707260:CDS
TAGCAGTATATGGAAAGAAG+TGG 0.597595 4_4:+80494395 Msa0707260:intron
AAACGGTTGTTACAAGAGCT+GGG 0.597984 4_4:+80493878 Msa0707260:CDS
GTTGAAAGATGTTCCTGAAG+GGG 0.598838 4_4:+80494131 Msa0707260:CDS
AAGCTCCAATGGAGAAATTG+GGG 0.600807 4_4:-80493259 None:intergenic
ATGAAGCATTAAATGGACAC+AGG 0.600808 4_4:+80497104 Msa0707260:CDS
TATTTCTGAAGAAGAGAAGT+CGG 0.601275 4_4:+80493647 Msa0707260:CDS
TACAGAATCTGCACAAGGGA+CGG 0.603574 4_4:+80496423 Msa0707260:intron
GCTGTAAGTTGGGTGAGTGT+AGG 0.604738 4_4:+80500603 Msa0707260:intron
GACTAATCTTGAAAGAGCAA+AGG 0.606188 4_4:+80496508 Msa0707260:CDS
GTCTGCATATTTCCAAAGCA+CGG 0.606454 4_4:-80497899 None:intergenic
TGGATATGTGGGATCTGTGA+GGG 0.607873 4_4:+80494156 Msa0707260:CDS
TTCACCGGAGAATATTTACA+AGG 0.608665 4_4:+80496988 Msa0707260:CDS
TTCAGGGATAGCAAATACAA+TGG 0.610395 4_4:+80497575 Msa0707260:intron
CGGCGGTGAATTTGAAGTTG+GGG 0.617237 4_4:+80493954 Msa0707260:CDS
CCTTCAGGAACATCTTTCAA+CGG 0.617438 4_4:-80494129 None:intergenic
AGAAGATGCTACTTCTGATG+AGG 0.621654 4_4:+80493999 Msa0707260:CDS
ACAAGAGCTGGGAGAAAAGG+TGG 0.622286 4_4:+80493889 Msa0707260:CDS
TCATGATTTCGTCCCCAGAA+CGG 0.622364 4_4:-80494056 None:intergenic
ATACATAGACAGACCACCCA+AGG 0.623444 4_4:-80501807 None:intergenic
GGGATGCAACAGGTAATACA+AGG 0.624016 4_4:-80501845 None:intergenic
TCGTCAATGAGCAAAATACA+TGG 0.624876 4_4:-80497205 None:intergenic
TGAGGAAGATCCAGAAGTGG+AGG 0.628093 4_4:+80494017 Msa0707260:CDS
GTATGCCAAAGCTAGCAATG+AGG 0.629062 4_4:+80495925 Msa0707260:CDS
CTACGTGTAGGTAAGGAATG+AGG 0.635826 4_4:-80493421 None:intergenic
CAATGAGCAAAATACATGGT+CGG 0.635961 4_4:-80497201 None:intergenic
CCCATTCGGCTTGATATACG+AGG 0.638148 4_4:-80497618 None:intergenic
TGAAGCATTAAATGGACACA+GGG 0.640411 4_4:+80497105 Msa0707260:CDS
AGTATCGGAGTTCAAGCGCG+TGG 0.641574 4_4:-80493446 None:intergenic
AAGCGCGTGGATCTACGTGT+AGG 0.642274 4_4:-80493433 None:intergenic
GCTACTGGTGTCGGGTACGG+TGG 0.642777 4_4:+80494424 Msa0707260:CDS
GCTAACTGATGGCTTGTCGG+TGG 0.645325 4_4:-80496312 None:intergenic
TGATGAGGAAGATCCAGAAG+TGG 0.647235 4_4:+80494014 Msa0707260:CDS
ATCACAATTAGCTTGGAATG+TGG 0.648587 4_4:-80497388 None:intergenic
AGTATATGGAAAGAAGTGGA+TGG 0.649668 4_4:+80494399 Msa0707260:intron
AGATTCGGCAACGAGATTGG+GGG 0.651554 4_4:-80493476 None:intergenic
TCATGACATAGCAATGTCGA+AGG 0.658256 4_4:-80495892 None:intergenic
AAGAAAGTTGTTTATGACGG+CGG 0.658330 4_4:+80493937 Msa0707260:CDS
GAGATAACGACATTCATCAA+AGG 0.658884 4_4:+80496679 Msa0707260:CDS
ACAAGAGTGTCATAATAGTG+TGG 0.659197 4_4:-80501888 None:intergenic
TGAGTGTACTCTCAGTGATG+AGG 0.663135 4_4:+80496891 Msa0707260:CDS
TCTTGTAACCAGAAACCAGT+CGG 0.664804 4_4:+80497237 Msa0707260:CDS
CGAAGACTGGAACATCGACA+AGG 0.665993 4_4:+80496221 Msa0707260:CDS
AAGCTGCTGATAATTATATG+GGG 0.670932 4_4:-80497661 None:intergenic
GAGGTGAGAATTGTGAACGG+AGG 0.673704 4_4:-80493393 None:intergenic
TGACATTGATGATGAAAGAG+AGG 0.674539 4_4:+80496012 Msa0707260:CDS
AGTCTTACCCAACTTGCAGG+AGG 0.676386 4_4:-80500394 None:intergenic
TGCGAGCTAGGGTTTGATGG+AGG 0.679189 4_4:-80493292 None:intergenic
TCAGGAACATCTTTCAACGG+TGG 0.680289 4_4:-80494126 None:intergenic
GCTTTACAAAACAGGAATGG+GGG 0.682677 4_4:+80499917 Msa0707260:CDS
AGCTTTACAAAACAGGAATG+GGG 0.683635 4_4:+80499916 Msa0707260:CDS
AAAAGGTGGAAAGATTGCGA+AGG 0.684724 4_4:+80493903 Msa0707260:CDS
AATGATACAGAATCTGCACA+AGG 0.686949 4_4:+80496418 Msa0707260:intron
TGTTGCATCCCACAAAAGAG+GGG 0.687207 4_4:+80501857 Msa0707260:three_prime_UTR
CATACAACAGATGCTAACAC+TGG 0.690075 4_4:-80501779 None:intergenic
GTAAAGAAGAGGAAGCAGGA+AGG 0.690620 4_4:+80493727 Msa0707260:CDS
AGTTGCAGCTCAATTTCCCG+AGG 0.692840 4_4:+80500666 Msa0707260:CDS
TGAAGATGTTGAATATGATG+AGG 0.693036 4_4:+80496263 Msa0707260:CDS
CAACGATTTGGCCAACATCG+AGG 0.693338 4_4:+80494515 Msa0707260:CDS
TTTCTGACAATCAATGTCTG+GGG 0.698842 4_4:+80496707 Msa0707260:CDS
CAAGCCGAATGGGCATCCAG+AGG 0.706358 4_4:+80497628 Msa0707260:CDS
AATATGAATATGACATCCAG+TGG 0.707312 4_4:+80495969 Msa0707260:CDS
ATGACGGTTTCATGTCTCTG+CGG 0.719836 4_4:+80500338 Msa0707260:CDS
ATGATACAGAATCTGCACAA+GGG 0.728041 4_4:+80496419 Msa0707260:intron
TAGAATTCTGATGAGAGTGA+CGG 0.741239 4_4:+80496195 Msa0707260:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAATTTATTTATTTTA+AGG + chr4_4:80500172-80500191 Msa0707260:intron 0.0%
!!! TTTTATTAAAAGAAAAACAT+CGG + chr4_4:80498361-80498380 Msa0707260:intron 10.0%
!! AAAAATTAACATAAGTTAAT+AGG - chr4_4:80501713-80501732 None:intergenic 10.0%
!! CCAACTATTTAAATTAATAT+GGG - chr4_4:80495099-80495118 None:intergenic 15.0%
!! TCCAACTATTTAAATTAATA+TGG - chr4_4:80495100-80495119 None:intergenic 15.0%
!! TAATCAAATACAGTAAAAAA+AGG + chr4_4:80495187-80495206 Msa0707260:intron 15.0%
!! AATCAAATACAGTAAAAAAA+GGG + chr4_4:80495188-80495207 Msa0707260:intron 15.0%
!! TTTATTATATGAAACAAGAT+TGG + chr4_4:80497309-80497328 Msa0707260:intron 15.0%
!! CACATTATTACAAAATTTAT+AGG + chr4_4:80498212-80498231 Msa0707260:intron 15.0%
!! AGATGATAACTATATAATTT+GGG - chr4_4:80498615-80498634 None:intergenic 15.0%
!! TAGATGATAACTATATAATT+TGG - chr4_4:80498616-80498635 None:intergenic 15.0%
!!! AAAAAATATTTGAAATGTCA+AGG - chr4_4:80499391-80499410 None:intergenic 15.0%
!!! ACTATAGTTCTATTATTTCT+TGG - chr4_4:80494784-80494803 None:intergenic 20.0%
!! CCCATATTAATTTAAATAGT+TGG + chr4_4:80495096-80495115 Msa0707260:intron 20.0%
!! TTAAATTGAATGCAAAAAGA+AGG - chr4_4:80495170-80495189 None:intergenic 20.0%
!! ATCAAATACAGTAAAAAAAG+GGG + chr4_4:80495189-80495208 Msa0707260:intron 20.0%
!! ATAGATAAAAACCAATTCTA+AGG - chr4_4:80495380-80495399 None:intergenic 20.0%
!!! AATTGGTTTTTATCTATTCT+TGG + chr4_4:80495383-80495402 Msa0707260:intron 20.0%
!! ATCACAAATTCTATCAAATT+TGG - chr4_4:80495601-80495620 None:intergenic 20.0%
!!! GCAACATAATTTACATTTTT+TGG - chr4_4:80495683-80495702 None:intergenic 20.0%
!!! TTATGCTCAATTTTAATGAT+GGG - chr4_4:80495752-80495771 None:intergenic 20.0%
!!! CTTGTACATATTTTATAAGA+CGG - chr4_4:80496041-80496060 None:intergenic 20.0%
!! TTACACAACAAAAATTTCAT+AGG - chr4_4:80496399-80496418 None:intergenic 20.0%
!! TATATGACCTAAAATAGTAT+TGG - chr4_4:80497085-80497104 None:intergenic 20.0%
!! GTTTCATATAATAAATAACG+TGG - chr4_4:80497304-80497323 None:intergenic 20.0%
!! TATATTTGAAAAACAAGCTA+TGG + chr4_4:80497719-80497738 Msa0707260:CDS 20.0%
!! TACAAAATTTATAGGATTTC+AGG + chr4_4:80498220-80498239 Msa0707260:intron 20.0%
!!! ATACATTAAAATCTGAAGTT+TGG - chr4_4:80498254-80498273 None:intergenic 20.0%
!! ATAAAATTACACCAATGTAA+TGG - chr4_4:80498347-80498366 None:intergenic 20.0%
!!! AATAAGTTGATCAAATCTAT+TGG + chr4_4:80498499-80498518 Msa0707260:intron 20.0%
!! TAGTTTCAACAAAATTATTG+TGG - chr4_4:80498889-80498908 None:intergenic 20.0%
!! TTAGGAATCTTATAACATTT+GGG - chr4_4:80499416-80499435 None:intergenic 20.0%
!!! CATTTTGCTTTTTAAAAAAG+TGG - chr4_4:80499527-80499546 None:intergenic 20.0%
!!! TTTTTAAAAAGCAAAATGAG+TGG + chr4_4:80499529-80499548 Msa0707260:intron 20.0%
!!! CTTTTATATATTCATTTAGC+TGG + chr4_4:80499780-80499799 Msa0707260:intron 20.0%
!!! TTTTCAGTTTAATAGCATTA+TGG + chr4_4:80500079-80500098 Msa0707260:intron 20.0%
!! GGATAATATATCAAATTTCT+TGG + chr4_4:80500193-80500212 Msa0707260:intron 20.0%
!! AAAATTAAGATCAAAACTAC+TGG - chr4_4:80500804-80500823 None:intergenic 20.0%
!!! TAAATTAAGCATTTTAGACA+CGG - chr4_4:80500840-80500859 None:intergenic 20.0%
!! AGAAACAGACTTAAAAAATT+GGG + chr4_4:80500919-80500938 Msa0707260:intron 20.0%
!! TTTCTGTTCCATTTAATAAA+AGG - chr4_4:80501284-80501303 None:intergenic 20.0%
!! AATCTGTTTAATAATAAGTC+TGG + chr4_4:80501355-80501374 Msa0707260:intron 20.0%
!! ATCTGTTTAATAATAAGTCT+GGG + chr4_4:80501356-80501375 Msa0707260:intron 20.0%
!! TAAATAAAACAGAAATGAAC+AGG - chr4_4:80501511-80501530 None:intergenic 20.0%
!! TGATTGTTGAATTTGAGATT+CGG - chr4_4:80493494-80493513 None:intergenic 25.0%
! TACAAGAAAGTTGTTTATGA+CGG + chr4_4:80493934-80493953 Msa0707260:CDS 25.0%
! ATGTAAATAAACCGCATAAT+TGG - chr4_4:80494361-80494380 None:intergenic 25.0%
! TGTGGTATACTATATTAGAA+AGG + chr4_4:80494561-80494580 Msa0707260:intron 25.0%
!! TCAACTTTTATATGCCTTAA+TGG + chr4_4:80494921-80494940 Msa0707260:intron 25.0%
!! TCAACTTTTATATGCCTTAA+TGG + chr4_4:80494921-80494940 Msa0707260:intron 25.0%
!! CAATGTATTTCCAACATTTT+AGG - chr4_4:80495286-80495305 None:intergenic 25.0%
!!! AAGATTCACTCACATTTTTT+GGG - chr4_4:80495468-80495487 None:intergenic 25.0%
!!! AAAGATTCACTCACATTTTT+TGG - chr4_4:80495469-80495488 None:intergenic 25.0%
! AAAAATGTGAGTGAATCTTT+AGG + chr4_4:80495469-80495488 Msa0707260:intron 25.0%
!!! ATTTCATGTAACTTTTGAGT+AGG + chr4_4:80495525-80495544 Msa0707260:intron 25.0%
!!! TATGCTCAATTTTAATGATG+GGG - chr4_4:80495751-80495770 None:intergenic 25.0%
!!! GTTATGCTCAATTTTAATGA+TGG - chr4_4:80495753-80495772 None:intergenic 25.0%
! TTAAAATTGAGCATAACTTG+TGG + chr4_4:80495756-80495775 Msa0707260:intron 25.0%
! CGTCTTATAAAATATGTACA+AGG + chr4_4:80496039-80496058 Msa0707260:intron 25.0%
!! TAACTCTTTTATGAGAAGAA+TGG - chr4_4:80496066-80496085 None:intergenic 25.0%
!!! GATGACTGTATATTTTTACA+TGG + chr4_4:80496172-80496191 Msa0707260:intron 25.0%
!!! TCAACATACTTATTTCTACA+AGG - chr4_4:80496569-80496588 None:intergenic 25.0%
! AAGTATGTTGAAGTTTAACA+TGG + chr4_4:80496578-80496597 Msa0707260:intron 25.0%
!!! CATGCTTTTATTTAGAGAAA+TGG + chr4_4:80496654-80496673 Msa0707260:intron 25.0%
!! GAACTTTAGTTTAGATATCA+CGG + chr4_4:80496819-80496838 Msa0707260:intron 25.0%
!! CACAAATCTTTTACTGTTTT+TGG + chr4_4:80497018-80497037 Msa0707260:intron 25.0%
!! GTCATATATGAAGCATTAAA+TGG + chr4_4:80497097-80497116 Msa0707260:CDS 25.0%
!! TATAACTTTCCTTTTATCAC+AGG + chr4_4:80497333-80497352 Msa0707260:intron 25.0%
! ACAGATGTAATATCAAATAC+TGG + chr4_4:80497467-80497486 Msa0707260:intron 25.0%
! CAGATGTAATATCAAATACT+GGG + chr4_4:80497468-80497487 Msa0707260:intron 25.0%
! TGTAATAATGTACTGAATTC+AGG + chr4_4:80497558-80497577 Msa0707260:intron 25.0%
! GTAATAATGTACTGAATTCA+GGG + chr4_4:80497559-80497578 Msa0707260:intron 25.0%
! CAAATATATCAATTCCATTG+AGG - chr4_4:80497707-80497726 None:intergenic 25.0%
! ACACATTTGTAAACAATATG+TGG + chr4_4:80498110-80498129 Msa0707260:intron 25.0%
! AGTAATCTAGTTGTTTATGT+GGG - chr4_4:80498176-80498195 None:intergenic 25.0%
! AAGTAATCTAGTTGTTTATG+TGG - chr4_4:80498177-80498196 None:intergenic 25.0%
! AACACTAGATTTACATTATC+GGG - chr4_4:80498283-80498302 None:intergenic 25.0%
! GAACACTAGATTTACATTAT+CGG - chr4_4:80498284-80498303 None:intergenic 25.0%
! TGTTCTCATTAATACTTATG+CGG + chr4_4:80498299-80498318 Msa0707260:intron 25.0%
! TAATGAATTCTCCATTACAT+TGG + chr4_4:80498333-80498352 Msa0707260:intron 25.0%
!! CCTTATATTGATTATGAAGA+GGG - chr4_4:80498398-80498417 None:intergenic 25.0%
!! ACCTTATATTGATTATGAAG+AGG - chr4_4:80498399-80498418 None:intergenic 25.0%
! AAACAAAAGTTCATGAATCA+TGG + chr4_4:80498575-80498594 Msa0707260:intron 25.0%
!! AATTGATGGTAATTCATTGA+AGG - chr4_4:80498672-80498691 None:intergenic 25.0%
!!! ATTTCCAATTTTGGTAATGT+AGG - chr4_4:80498738-80498757 None:intergenic 25.0%
! ACATTACCAAAATTGGAAAT+TGG + chr4_4:80498738-80498757 Msa0707260:intron 25.0%
! CATTACCAAAATTGGAAATT+GGG + chr4_4:80498739-80498758 Msa0707260:intron 25.0%
! ACATGTTTATCATAATCTCA+TGG - chr4_4:80498949-80498968 None:intergenic 25.0%
! TTGAAGTGGACAAAAAAATA+TGG - chr4_4:80498975-80498994 None:intergenic 25.0%
! GTTCTATCAAAAACCATATT+TGG - chr4_4:80499054-80499073 None:intergenic 25.0%
! TTTCAACTAACTTGAATATG+AGG - chr4_4:80499346-80499365 None:intergenic 25.0%
! TAGGAATCTTATAACATTTG+GGG - chr4_4:80499415-80499434 None:intergenic 25.0%
! CTTAGGAATCTTATAACATT+TGG - chr4_4:80499417-80499436 None:intergenic 25.0%
!!! AGACTTTATGCTGTTTTATA+TGG + chr4_4:80499583-80499602 Msa0707260:intron 25.0%
!! AAAAACTGGCTTAAAGATAA+AGG - chr4_4:80499717-80499736 None:intergenic 25.0%
! GAATTTCATGAAATTACTTG+AGG + chr4_4:80499743-80499762 Msa0707260:intron 25.0%
!! ATTTCACCTCTTCAATTTTA+AGG - chr4_4:80500032-80500051 None:intergenic 25.0%
!!! TTTCATTTTAACAATGCAGT+TGG + chr4_4:80500313-80500332 Msa0707260:intron 25.0%
! CTGGAAAATAATGATTGATT+TGG - chr4_4:80500785-80500804 None:intergenic 25.0%
! GAGAAACAGACTTAAAAAAT+TGG + chr4_4:80500918-80500937 Msa0707260:intron 25.0%
!!! TTTGACTTACAAATTTTGTG+TGG + chr4_4:80501008-80501027 Msa0707260:intron 25.0%
!!! TGTTGATTTTTCAAAAGACA+CGG - chr4_4:80501041-80501060 None:intergenic 25.0%
! ACTAATCTAGATGACAATAA+CGG + chr4_4:80501229-80501248 Msa0707260:intron 25.0%
! AGATGAAAATCTTAAAGTAG+TGG + chr4_4:80501460-80501479 Msa0707260:intron 25.0%
! CCATTCTTACATTAGATATT+TGG - chr4_4:80501658-80501677 None:intergenic 25.0%
! CCAAATATCTAATGTAAGAA+TGG + chr4_4:80501655-80501674 Msa0707260:exon 25.0%
! CTATGTATTACACATGTATT+AGG + chr4_4:80501822-80501841 Msa0707260:three_prime_UTR 25.0%
GGATGAGTATATAGGAAAAA+TGG - chr4_4:80493241-80493260 None:intergenic 30.0%
! TATTTCTGAAGAAGAGAAGT+CGG + chr4_4:80493647-80493666 Msa0707260:CDS 30.0%
TTTACAGATTTCGATGAATC+TGG - chr4_4:80493712-80493731 None:intergenic 30.0%
CTGAATTGAAGAAGAGAAAT+GGG + chr4_4:80493761-80493780 Msa0707260:CDS 30.0%
ATTGAGTGTGATAGTTGTTT+AGG + chr4_4:80494078-80494097 Msa0707260:CDS 30.0%
TTATTTGTACGCCAATTATG+CGG + chr4_4:80494347-80494366 Msa0707260:intron 30.0%
AGTTCAATGTTAGCAGTATA+TGG + chr4_4:80494385-80494404 Msa0707260:intron 30.0%
!! GTGATGGATTGTTAATGATT+TGG + chr4_4:80494537-80494556 Msa0707260:intron 30.0%
!! GATTGTTAATGATTTGGTTG+TGG + chr4_4:80494543-80494562 Msa0707260:intron 30.0%
GGTATACTATATTAGAAAGG+TGG + chr4_4:80494564-80494583 Msa0707260:intron 30.0%
CAATATGCTCTTTGATAGAT+TGG - chr4_4:80494623-80494642 None:intergenic 30.0%
TAGATGTTCCAAAGTTATCA+AGG - chr4_4:80494669-80494688 None:intergenic 30.0%
!! ATAACTTTGGAACATCTAGA+TGG + chr4_4:80494671-80494690 Msa0707260:intron 30.0%
ATAATAGCTGTCGTCAATTA+TGG + chr4_4:80494816-80494835 Msa0707260:intron 30.0%
AAGTTTGATAAGAGCCATTA+AGG - chr4_4:80494938-80494957 None:intergenic 30.0%
AAGTTTGATAAGAGCCATTA+AGG - chr4_4:80494938-80494957 None:intergenic 30.0%
TTATCAAACTTTAGCATCCT+TGG + chr4_4:80495021-80495040 Msa0707260:intron 30.0%
TATCAAACTTTAGCATCCTT+GGG + chr4_4:80495022-80495041 Msa0707260:intron 30.0%
AAAGAAGGAAACGAATAATC+AGG - chr4_4:80495155-80495174 None:intergenic 30.0%
AAAACTCCATCCTAAAATGT+TGG + chr4_4:80495273-80495292 Msa0707260:intron 30.0%
!! GTATTTCCAACATTTTAGGA+TGG - chr4_4:80495282-80495301 None:intergenic 30.0%
! TCTTCTTTAGAAGAAGGAAA+TGG + chr4_4:80495341-80495360 Msa0707260:intron 30.0%
!! TCTTTTGGAAACCTTAGAAT+TGG + chr4_4:80495366-80495385 Msa0707260:intron 30.0%
TGAAATGTTTATGTGAGTGT+AGG + chr4_4:80495648-80495667 Msa0707260:intron 30.0%
!!! AGTCTCGTTTTTTAATGTTC+AGG + chr4_4:80495802-80495821 Msa0707260:intron 30.0%
!!! GTCTCGTTTTTTAATGTTCA+GGG + chr4_4:80495803-80495822 Msa0707260:intron 30.0%
AATATGAATATGACATCCAG+TGG + chr4_4:80495969-80495988 Msa0707260:CDS 30.0%
TCAATATTACCACTGCTAAA+TGG - chr4_4:80496090-80496109 None:intergenic 30.0%
TATACAGATACACAGTTGAA+TGG + chr4_4:80496116-80496135 Msa0707260:intron 30.0%
TGAAGATGTTGAATATGATG+AGG + chr4_4:80496263-80496282 Msa0707260:CDS 30.0%
AAAGAATTCCAGAGCATATA+AGG + chr4_4:80496474-80496493 Msa0707260:CDS 30.0%
TTTCTACAAGGTAAAGACTT+AGG - chr4_4:80496557-80496576 None:intergenic 30.0%
TTAGTAATAGTCGCTTAACA+TGG - chr4_4:80496628-80496647 None:intergenic 30.0%
! TATTTCTGACAATCAATGTC+TGG + chr4_4:80496705-80496724 Msa0707260:CDS 30.0%
ATTTCTGACAATCAATGTCT+GGG + chr4_4:80496706-80496725 Msa0707260:CDS 30.0%
TATCTAAACTAAAGTTCTGC+TGG - chr4_4:80496816-80496835 None:intergenic 30.0%
!!! CTCCTTTTTTATGTGTGTAA+CGG + chr4_4:80496861-80496880 Msa0707260:intron 30.0%
TTCACCTTGTAAATATTCTC+CGG - chr4_4:80496995-80497014 None:intergenic 30.0%
! CCTAAAATAGTATTGGAAGT+CGG - chr4_4:80497078-80497097 None:intergenic 30.0%
TAAATGAGAGGTTTGTAGAA+GGG + chr4_4:80497155-80497174 Msa0707260:CDS 30.0%
TTCTGTACAATATTCTTGAC+TGG + chr4_4:80497356-80497375 Msa0707260:CDS 30.0%
!! TAAGTTTTTGTTGTCCACAA+AGG - chr4_4:80497533-80497552 None:intergenic 30.0%
AAGCTGCTGATAATTATATG+GGG - chr4_4:80497664-80497683 None:intergenic 30.0%
GAAGCTGCTGATAATTATAT+GGG - chr4_4:80497665-80497684 None:intergenic 30.0%
TGAAGCTGCTGATAATTATA+TGG - chr4_4:80497666-80497685 None:intergenic 30.0%
! GACATGATCTTTATTTCTTC+AGG + chr4_4:80497851-80497870 Msa0707260:intron 30.0%
TGATGACACGTAAAATCTAT+GGG - chr4_4:80498003-80498022 None:intergenic 30.0%
ATGATGACACGTAAAATCTA+TGG - chr4_4:80498004-80498023 None:intergenic 30.0%
! TAGATTTTACGTGTCATCAT+AGG + chr4_4:80498004-80498023 Msa0707260:intron 30.0%
TAATTGGCAACATGTGAAAT+AGG - chr4_4:80498054-80498073 None:intergenic 30.0%
! AACAAATGAGACTTTTGTGA+AGG - chr4_4:80498087-80498106 None:intergenic 30.0%
!! TATCTGACTTGGTTATTGTT+AGG - chr4_4:80498145-80498164 None:intergenic 30.0%
! TAAAATCTGAAGTTTGGTCT+TGG - chr4_4:80498248-80498267 None:intergenic 30.0%
GTTCTCATTAATACTTATGC+GGG + chr4_4:80498300-80498319 Msa0707260:intron 30.0%
CCCTCTTCATAATCAATATA+AGG + chr4_4:80498395-80498414 Msa0707260:intron 30.0%
AGCCATATATCTATAACTTC+AGG + chr4_4:80498815-80498834 Msa0707260:intron 30.0%
CTCCTGAAGTTATAGATATA+TGG - chr4_4:80498820-80498839 None:intergenic 30.0%
CATATATCTATAACTTCAGG+AGG + chr4_4:80498818-80498837 Msa0707260:intron 30.0%
! GTAATGTAACAGACTCTTTT+TGG - chr4_4:80498927-80498946 None:intergenic 30.0%
CGGAATAACAAATATTGAAG+TGG - chr4_4:80498989-80499008 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG + chr4_4:80499058-80499077 Msa0707260:intron 30.0%
! TCATCCTTTTTCTTCTATAG+TGG + chr4_4:80499151-80499170 Msa0707260:intron 30.0%
CATTCCACTATAGAAGAAAA+AGG - chr4_4:80499158-80499177 None:intergenic 30.0%
TAACTTTACATCTCATGACT+TGG - chr4_4:80499459-80499478 None:intergenic 30.0%
TGAAATTCGCAAGAAAAAAC+TGG - chr4_4:80499731-80499750 None:intergenic 30.0%
ATCACCTTCAAAACGAAAAA+AGG - chr4_4:80499846-80499865 None:intergenic 30.0%
TTTCCACCTTAAAATTGAAG+AGG + chr4_4:80500023-80500042 Msa0707260:intron 30.0%
ATTAAACTGAAAAAGAGCTG+AGG - chr4_4:80500072-80500091 None:intergenic 30.0%
AACTTAGATGTGTTATATCC+TGG + chr4_4:80500218-80500237 Msa0707260:intron 30.0%
!! TGTTGACTTTCTAGTAGAAA+AGG + chr4_4:80500241-80500260 Msa0707260:intron 30.0%
GATAAAATAGACATGCAACT+AGG - chr4_4:80500556-80500575 None:intergenic 30.0%
!!! ATTTTTTGCAGCTGTAAGTT+GGG + chr4_4:80500593-80500612 Msa0707260:intron 30.0%
TGTAGTTTAGGCATATGTAT+TGG + chr4_4:80500976-80500995 Msa0707260:intron 30.0%
TGAAAAATCAACAACCCTTA+CGG + chr4_4:80501048-80501067 Msa0707260:intron 30.0%
AAATGAGTATTTCAGCAGTT+TGG + chr4_4:80501095-80501114 Msa0707260:intron 30.0%
! TGCAACAGCCTTTTATTAAA+TGG + chr4_4:80501273-80501292 Msa0707260:intron 30.0%
ATGCATGTATGCATGTTAAA+GGG - chr4_4:80501437-80501456 None:intergenic 30.0%
TATGCATGTATGCATGTTAA+AGG - chr4_4:80501438-80501457 None:intergenic 30.0%
TTTAACATGCATACATGCAT+AGG + chr4_4:80501437-80501456 Msa0707260:intron 30.0%
ATTTATGACCCACAATTATG+TGG + chr4_4:80501526-80501545 Msa0707260:intron 30.0%
CACTAATACCACATAATTGT+GGG - chr4_4:80501537-80501556 None:intergenic 30.0%
TCACTAATACCACATAATTG+TGG - chr4_4:80501538-80501557 None:intergenic 30.0%
TACATAATTGTTACCATCTC+CGG + chr4_4:80501742-80501761 Msa0707260:three_prime_UTR 30.0%
GAAATTGGGGATGAGTATAT+AGG - chr4_4:80493249-80493268 None:intergenic 35.0%
AAATCCAAATCTCGTTCCAA+TGG + chr4_4:80493324-80493343 Msa0707260:CDS 35.0%
TGGAGCAAATGCAATTTCAT+CGG - chr4_4:80493683-80493702 None:intergenic 35.0%
CATCGAAATCTGTAAAGAAG+AGG + chr4_4:80493716-80493735 Msa0707260:CDS 35.0%
GCTGAATTGAAGAAGAGAAA+TGG + chr4_4:80493760-80493779 Msa0707260:CDS 35.0%
ATTGAAGAAGAGAAATGGGA+AGG + chr4_4:80493765-80493784 Msa0707260:CDS 35.0%
TTGAAGAAGAGAAATGGGAA+GGG + chr4_4:80493766-80493785 Msa0707260:CDS 35.0%
TTCTTAGTTTCCGATTGATC+CGG - chr4_4:80493826-80493845 None:intergenic 35.0%
AAGAAAGTTGTTTATGACGG+CGG + chr4_4:80493937-80493956 Msa0707260:CDS 35.0%
AGTGTGATAGTTGTTTAGGT+GGG + chr4_4:80494082-80494101 Msa0707260:CDS 35.0%
TAGCAGTATATGGAAAGAAG+TGG + chr4_4:80494395-80494414 Msa0707260:intron 35.0%
AGTATATGGAAAGAAGTGGA+TGG + chr4_4:80494399-80494418 Msa0707260:intron 35.0%
ATTTGAGCAGAGAGCTATAT+CGG + chr4_4:80494490-80494509 Msa0707260:CDS 35.0%
AGAAAGGTGGTTAGTATGAA+TGG + chr4_4:80494577-80494596 Msa0707260:intron 35.0%
! GATAGATTGGAAGTACAACT+AGG - chr4_4:80494610-80494629 None:intergenic 35.0%
! GTGACAATCCTTGATAACTT+TGG + chr4_4:80494658-80494677 Msa0707260:intron 35.0%
CTTTAATTGAGTATGCACTG+TGG - chr4_4:80494712-80494731 None:intergenic 35.0%
TGTGAGCTTGTCAATATTCA+AGG - chr4_4:80495317-80495336 None:intergenic 35.0%
! CATTCGTCTTCTTTAGAAGA+AGG + chr4_4:80495335-80495354 Msa0707260:intron 35.0%
! AAGAAGGAAATGGCATCTTT+TGG + chr4_4:80495351-80495370 Msa0707260:intron 35.0%
CTTCATAAAACCCACTTTAC+CGG - chr4_4:80495428-80495447 None:intergenic 35.0%
!!! ATTCTCCTTTTTTCTCATCG+TGG + chr4_4:80495838-80495857 Msa0707260:intron 35.0%
GCTTCTCTGTTCAATATAGA+TGG + chr4_4:80495862-80495881 Msa0707260:intron 35.0%
!! TGACATTGATGATGAAAGAG+AGG + chr4_4:80496012-80496031 Msa0707260:CDS 35.0%
AAGAGTTAACCATTTAGCAG+TGG + chr4_4:80496078-80496097 Msa0707260:intron 35.0%
TAGAATTCTGATGAGAGTGA+CGG + chr4_4:80496195-80496214 Msa0707260:intron 35.0%
AATGATACAGAATCTGCACA+AGG + chr4_4:80496418-80496437 Msa0707260:intron 35.0%
ATGATACAGAATCTGCACAA+GGG + chr4_4:80496419-80496438 Msa0707260:intron 35.0%
TTCTTTGGACTTCAGAAGAT+AGG + chr4_4:80496446-80496465 Msa0707260:CDS 35.0%
GACTAATCTTGAAAGAGCAA+AGG + chr4_4:80496508-80496527 Msa0707260:CDS 35.0%
GAGATAACGACATTCATCAA+AGG + chr4_4:80496679-80496698 Msa0707260:CDS 35.0%
TTTCTGACAATCAATGTCTG+GGG + chr4_4:80496707-80496726 Msa0707260:CDS 35.0%
GAACTATCTACATTGCTTGT+TGG + chr4_4:80496782-80496801 Msa0707260:intron 35.0%
TGCCGTTACACACATAAAAA+AGG - chr4_4:80496866-80496885 None:intergenic 35.0%
TTCACCGGAGAATATTTACA+AGG + chr4_4:80496988-80497007 Msa0707260:CDS 35.0%
!! GGTTTTATGACCAAATTCCT+TGG + chr4_4:80497039-80497058 Msa0707260:intron 35.0%
! CCGACTTCCAATACTATTTT+AGG + chr4_4:80497075-80497094 Msa0707260:intron 35.0%
! ATGAAGCATTAAATGGACAC+AGG + chr4_4:80497104-80497123 Msa0707260:CDS 35.0%
! TGAAGCATTAAATGGACACA+GGG + chr4_4:80497105-80497124 Msa0707260:CDS 35.0%
CAAACCTCTCATTTAGCAAA+CGG - chr4_4:80497150-80497169 None:intergenic 35.0%
CTAAATGAGAGGTTTGTAGA+AGG + chr4_4:80497154-80497173 Msa0707260:CDS 35.0%
TTTGTAGAAGGGAAGAAAAC+TGG + chr4_4:80497166-80497185 Msa0707260:CDS 35.0%
CAATGAGCAAAATACATGGT+CGG - chr4_4:80497204-80497223 None:intergenic 35.0%
TCGTCAATGAGCAAAATACA+TGG - chr4_4:80497208-80497227 None:intergenic 35.0%
AATGACAAGTTTCTTGCAAC+AGG - chr4_4:80497275-80497294 None:intergenic 35.0%
GTTGCAAGAAACTTGTCATT+AGG + chr4_4:80497275-80497294 Msa0707260:intron 35.0%
TGTACAGAACCTGTGATAAA+AGG - chr4_4:80497345-80497364 None:intergenic 35.0%
! ATCACAATTAGCTTGGAATG+TGG - chr4_4:80497391-80497410 None:intergenic 35.0%
CATTCCAAGCTAATTGTGAT+AGG + chr4_4:80497391-80497410 Msa0707260:CDS 35.0%
CTTACCTATCACAATTAGCT+TGG - chr4_4:80497398-80497417 None:intergenic 35.0%
TAAGAACTACAATGCCTTTG+TGG + chr4_4:80497516-80497535 Msa0707260:intron 35.0%
TTCAGGGATAGCAAATACAA+TGG + chr4_4:80497575-80497594 Msa0707260:intron 35.0%
!! TCTCCAAGTCTTTTGAAGAT+TGG + chr4_4:80497764-80497783 Msa0707260:intron 35.0%
!! CTCCAAGTCTTTTGAAGATT+GGG + chr4_4:80497765-80497784 Msa0707260:intron 35.0%
AACCCAATCTTCAAAAGACT+TGG - chr4_4:80497770-80497789 None:intergenic 35.0%
! CCTTTACCATTTTATGCACA+CGG + chr4_4:80497790-80497809 Msa0707260:intron 35.0%
! CTTTACCATTTTATGCACAC+GGG + chr4_4:80497791-80497810 Msa0707260:intron 35.0%
! TGAAGGCACATGTAACTAAT+TGG - chr4_4:80498070-80498089 None:intergenic 35.0%
GAAGAAAACAACTTAGTGGT+TGG - chr4_4:80498531-80498550 None:intergenic 35.0%
GCTTGAAGAAAACAACTTAG+TGG - chr4_4:80498535-80498554 None:intergenic 35.0%
TCATAACCTCTACCTTTAGA+TGG + chr4_4:80498636-80498655 Msa0707260:intron 35.0%
CAGGAATTTGAGTCAATTGA+TGG - chr4_4:80498686-80498705 None:intergenic 35.0%
TAAATGTGAAGCAACTCTTG+GGG - chr4_4:80498796-80498815 None:intergenic 35.0%
CTAAATGTGAAGCAACTCTT+GGG - chr4_4:80498797-80498816 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG + chr4_4:80499038-80499057 Msa0707260:intron 35.0%
GCAGATGCAAATGAATTAGT+GGG - chr4_4:80499257-80499276 None:intergenic 35.0%
AGCAGATGCAAATGAATTAG+TGG - chr4_4:80499258-80499277 None:intergenic 35.0%
! TAACTTGAATATGAGGTGCT+TGG - chr4_4:80499339-80499358 None:intergenic 35.0%
TAGTTGAAATTTGCAGTGTG+TGG + chr4_4:80499357-80499376 Msa0707260:intron 35.0%
TTCATGAAATTACTTGAGGC+AGG + chr4_4:80499747-80499766 Msa0707260:intron 35.0%
TCATGAAATTACTTGAGGCA+GGG + chr4_4:80499748-80499767 Msa0707260:intron 35.0%
!!! TGCACCTTTTTTCGTTTTGA+AGG + chr4_4:80499839-80499858 Msa0707260:intron 35.0%
ATGAAAAACTGTTCCAGACT+TGG + chr4_4:80499864-80499883 Msa0707260:CDS 35.0%
! CAAAATTTTCCTGACAGCTA+TGG + chr4_4:80499887-80499906 Msa0707260:CDS 35.0%
GAGCTTTACAAAACAGGAAT+GGG + chr4_4:80499915-80499934 Msa0707260:CDS 35.0%
AGCTTTACAAAACAGGAATG+GGG + chr4_4:80499916-80499935 Msa0707260:CDS 35.0%
! GAAGCATACCTTTTCAAAAG+TGG - chr4_4:80499946-80499965 None:intergenic 35.0%
!! TCACCTCTTCAATTTTAAGG+TGG - chr4_4:80500029-80500048 None:intergenic 35.0%
! CTTTCTAGTAGAAAAGGCAT+TGG + chr4_4:80500247-80500266 Msa0707260:intron 35.0%
AAATAGACATGCAACTAGGA+TGG - chr4_4:80500552-80500571 None:intergenic 35.0%
AGCTGCAAAAAATGGAAGAA+GGG - chr4_4:80500586-80500605 None:intergenic 35.0%
CAACTTACAGCTGCAAAAAA+TGG - chr4_4:80500594-80500613 None:intergenic 35.0%
!!! CATTTTTTGCAGCTGTAAGT+TGG + chr4_4:80500592-80500611 Msa0707260:intron 35.0%
!! TCATCGGTTTGCATCATTAA+TGG - chr4_4:80500726-80500745 None:intergenic 35.0%
CTCATCATAATCTCACTCAT+CGG - chr4_4:80500742-80500761 None:intergenic 35.0%
ATGACGACACTTTGTAGTTT+AGG + chr4_4:80500964-80500983 Msa0707260:intron 35.0%
GAAAAATCAACAACCCTTAC+GGG + chr4_4:80501049-80501068 Msa0707260:intron 35.0%
TTGGTCAGTCTGTAAATAGA+TGG + chr4_4:80501114-80501133 Msa0707260:intron 35.0%
TGGATACAAACACTTAAGTG+AGG + chr4_4:80501134-80501153 Msa0707260:intron 35.0%
! GTTTCATTCAAGAGTACATC+CGG + chr4_4:80501178-80501197 Msa0707260:intron 35.0%
TAATAAAAGGCTGTTGCACA+GGG - chr4_4:80501271-80501290 None:intergenic 35.0%
TTAATAAAAGGCTGTTGCAC+AGG - chr4_4:80501272-80501291 None:intergenic 35.0%
TGCATGTATGCATGTTAAAG+GGG - chr4_4:80501436-80501455 None:intergenic 35.0%
ATTAGATATTTGGACAGCCA+AGG - chr4_4:80501648-80501667 None:intergenic 35.0%
!! ACTGGTCTTCATAATAGTAC+CGG - chr4_4:80501764-80501783 None:intergenic 35.0%
TGTTAGCATCTGTTGTATGT+TGG + chr4_4:80501783-80501802 Msa0707260:three_prime_UTR 35.0%
!! ACAAGAGTGTCATAATAGTG+TGG - chr4_4:80501891-80501910 None:intergenic 35.0%
AAGCTCCAATGGAGAAATTG+GGG - chr4_4:80493262-80493281 None:intergenic 40.0%
GAAGCTCCAATGGAGAAATT+GGG - chr4_4:80493263-80493282 None:intergenic 40.0%
AGAAGCTCCAATGGAGAAAT+TGG - chr4_4:80493264-80493283 None:intergenic 40.0%
GGAGATTGAAGAAGCTTCTT+GGG - chr4_4:80493358-80493377 None:intergenic 40.0%
TGAGAGGTGAGAATTGTGAA+CGG - chr4_4:80493399-80493418 None:intergenic 40.0%
AACAATCAACTCCGAGAAGA+GGG + chr4_4:80493506-80493525 Msa0707260:CDS 40.0%
! TTCGATGAATCTGGCGATTT+TGG - chr4_4:80493703-80493722 None:intergenic 40.0%
ATCTGTAAAGAAGAGGAAGC+AGG + chr4_4:80493723-80493742 Msa0707260:CDS 40.0%
GAAGCAGGAAGGTGAAAAAA+CGG + chr4_4:80493738-80493757 Msa0707260:CDS 40.0%
CGGAAACTAAGAAGAGAAAG+AGG + chr4_4:80493833-80493852 Msa0707260:CDS 40.0%
GAAGAGAAAGAGGAAGAATG+AGG + chr4_4:80493843-80493862 Msa0707260:CDS 40.0%
AAAGAGGAAGAATGAGGTCA+AGG + chr4_4:80493849-80493868 Msa0707260:CDS 40.0%
TGAGGTCAAGGTTGAGAAAA+CGG + chr4_4:80493861-80493880 Msa0707260:CDS 40.0%
AAAACGGTTGTTACAAGAGC+TGG + chr4_4:80493877-80493896 Msa0707260:CDS 40.0%
AAACGGTTGTTACAAGAGCT+GGG + chr4_4:80493878-80493897 Msa0707260:CDS 40.0%
AAAAGGTGGAAAGATTGCGA+AGG + chr4_4:80493903-80493922 Msa0707260:CDS 40.0%
GGGATGATGTTTATGTGAAG+AGG + chr4_4:80493974-80493993 Msa0707260:CDS 40.0%
! AGAAGATGCTACTTCTGATG+AGG + chr4_4:80493999-80494018 Msa0707260:CDS 40.0%
!!! TGTAGGTTTTGTTTCCGTTC+TGG + chr4_4:80494042-80494061 Msa0707260:CDS 40.0%
!!! GTAGGTTTTGTTTCCGTTCT+GGG + chr4_4:80494043-80494062 Msa0707260:CDS 40.0%
!!! TAGGTTTTGTTTCCGTTCTG+GGG + chr4_4:80494044-80494063 Msa0707260:CDS 40.0%
GAGTGTGATAGTTGTTTAGG+TGG + chr4_4:80494081-80494100 Msa0707260:CDS 40.0%
CCTTCAGGAACATCTTTCAA+CGG - chr4_4:80494132-80494151 None:intergenic 40.0%
CGTTGAAAGATGTTCCTGAA+GGG + chr4_4:80494130-80494149 Msa0707260:CDS 40.0%
GTTGAAAGATGTTCCTGAAG+GGG + chr4_4:80494131-80494150 Msa0707260:CDS 40.0%
CTAACAAGCTTCTTACCCTT+CGG - chr4_4:80494219-80494238 None:intergenic 40.0%
TTGTTAGAACAATGCGTCAG+AGG + chr4_4:80494232-80494251 Msa0707260:CDS 40.0%
GCTTCAATCAAGTGATCTGT+GGG + chr4_4:80494254-80494273 Msa0707260:CDS 40.0%
AGCTCTCTGCTCAAATTATG+TGG - chr4_4:80494486-80494505 None:intergenic 40.0%
TAATTGAGTATGCACTGTGG+AGG - chr4_4:80494709-80494728 None:intergenic 40.0%
AGTCTGTCTGAATCTTACTC+TGG + chr4_4:80494730-80494749 Msa0707260:intron 40.0%
ACGATCACATCTCTACTTAC+AGG + chr4_4:80494898-80494917 Msa0707260:intron 40.0%
AAGATGCCACTCATTATCTC+CGG + chr4_4:80495406-80495425 Msa0707260:intron 40.0%
ACTTTACCGGAGATAATGAG+TGG - chr4_4:80495415-80495434 None:intergenic 40.0%
ACTCATTATCTCCGGTAAAG+TGG + chr4_4:80495414-80495433 Msa0707260:intron 40.0%
CTCATTATCTCCGGTAAAGT+GGG + chr4_4:80495415-80495434 Msa0707260:intron 40.0%
!!! TCACTCACATTTTTTGGGCT+TGG - chr4_4:80495463-80495482 None:intergenic 40.0%
TTTATGTGAGTGTAGGCAAG+AGG + chr4_4:80495655-80495674 Msa0707260:intron 40.0%
GGGAAAAATTACACGCACTA+AGG - chr4_4:80495731-80495750 None:intergenic 40.0%
AAGCACCACGATGAGAAAAA+AGG - chr4_4:80495846-80495865 None:intergenic 40.0%
TCATGACATAGCAATGTCGA+AGG - chr4_4:80495895-80495914 None:intergenic 40.0%
TTGCTATGTCATGATCCCTA+AGG + chr4_4:80495901-80495920 Msa0707260:CDS 40.0%
!! TAGCTTTGGCATACTCCTTA+GGG - chr4_4:80495919-80495938 None:intergenic 40.0%
TATGCCAAAGCTAGCAATGA+GGG + chr4_4:80495926-80495945 Msa0707260:CDS 40.0%
TTCATACTGCAGCTAACTGA+TGG - chr4_4:80496326-80496345 None:intergenic 40.0%
TTGTGAGACCTTATATGCTC+TGG - chr4_4:80496485-80496504 None:intergenic 40.0%
!! TTGAAGTCAGAAGTTGATGC+AGG + chr4_4:80496917-80496936 Msa0707260:CDS 40.0%
CATCAAACCATACTGTTTCG+TGG + chr4_4:80496943-80496962 Msa0707260:CDS 40.0%
TTGATCTCCACGAAACAGTA+TGG - chr4_4:80496953-80496972 None:intergenic 40.0%
TACTGTTTCGTGGAGATCAA+TGG + chr4_4:80496953-80496972 Msa0707260:CDS 40.0%
! GGAGATCAATGGTCTGAAAT+TGG + chr4_4:80496964-80496983 Msa0707260:CDS 40.0%
CATAAGGCAACCAAGGAATT+TGG - chr4_4:80497052-80497071 None:intergenic 40.0%
CAAATTCCTTGGTTGCCTTA+TGG + chr4_4:80497050-80497069 Msa0707260:intron 40.0%
TATTGGAAGTCGGAACCATA+AGG - chr4_4:80497068-80497087 None:intergenic 40.0%
TCTTGTAACCAGAAACCAGT+CGG + chr4_4:80497237-80497256 Msa0707260:CDS 40.0%
!! AGGATTTGTTAGTTACCGAC+TGG - chr4_4:80497255-80497274 None:intergenic 40.0%
! AATTAGCTTGGAATGTGGCT+TGG - chr4_4:80497386-80497405 None:intergenic 40.0%
ATACGAGGAAGTAACTTCTC+TGG - chr4_4:80497606-80497625 None:intergenic 40.0%
CCGTGTGCATAAAATGGTAA+AGG - chr4_4:80497793-80497812 None:intergenic 40.0%
GTCTGCATATTTCCAAAGCA+CGG - chr4_4:80497902-80497921 None:intergenic 40.0%
ATACCTGCAGCAACATTATC+AGG - chr4_4:80497972-80497991 None:intergenic 40.0%
GTGTCATCATAGGAGATAGA+GGG + chr4_4:80498014-80498033 Msa0707260:intron 40.0%
GGGTGAAGATTTATCTGACT+TGG - chr4_4:80498156-80498175 None:intergenic 40.0%
TTTCAGACTAGAGTTCAGTC+TGG - chr4_4:80498709-80498728 None:intergenic 40.0%
! AGAGGCCCAATTTCCAATTT+TGG - chr4_4:80498747-80498766 None:intergenic 40.0%
GCTAAATGTGAAGCAACTCT+TGG - chr4_4:80498798-80498817 None:intergenic 40.0%
CAAAATTATTGTGGAGCAGC+AGG - chr4_4:80498880-80498899 None:intergenic 40.0%
!! CTTTTTGGAGATACTGATGC+TGG - chr4_4:80498912-80498931 None:intergenic 40.0%
CCTTCACACATAGGTAACAA+CGG - chr4_4:80499009-80499028 None:intergenic 40.0%
AATACCAAGCCTTCACACAT+AGG - chr4_4:80499018-80499037 None:intergenic 40.0%
! AGGCTTGGTATTCAATGAGT+TGG + chr4_4:80499026-80499045 Msa0707260:intron 40.0%
!! AGTGATGCTGACTGCATTTT+AGG - chr4_4:80499195-80499214 None:intergenic 40.0%
! GCACTGATACTTTATGTCTG+AGG + chr4_4:80499220-80499239 Msa0707260:intron 40.0%
CAGCATAAAGTCTTCGTTCA+TGG - chr4_4:80499576-80499595 None:intergenic 40.0%
!!! TATGCTGTTTTATATGGCGC+TGG + chr4_4:80499589-80499608 Msa0707260:intron 40.0%
!!! TTTTATATGGCGCTGGCATT+AGG + chr4_4:80499596-80499615 Msa0707260:intron 40.0%
! CAGGAAAATTTTGCCAAGTC+TGG - chr4_4:80499880-80499899 None:intergenic 40.0%
CGAGCTTTACAAAACAGGAA+TGG + chr4_4:80499914-80499933 Msa0707260:CDS 40.0%
GCTTTACAAAACAGGAATGG+GGG + chr4_4:80499917-80499936 Msa0707260:CDS 40.0%
TCTACTAGAAAGTCAACACC+AGG - chr4_4:80500239-80500258 None:intergenic 40.0%
AACAATGCAGTTGGCAATGA+CGG + chr4_4:80500322-80500341 Msa0707260:intron 40.0%
ATGATATCCTCCTGCAAGTT+GGG + chr4_4:80500387-80500406 Msa0707260:CDS 40.0%
ATAAGTCTTACCCAACTTGC+AGG - chr4_4:80500400-80500419 None:intergenic 40.0%
! TACATGTTTCTGCGTTGAAG+TGG + chr4_4:80500430-80500449 Msa0707260:intron 40.0%
CAGCTGCAAAAAATGGAAGA+AGG - chr4_4:80500587-80500606 None:intergenic 40.0%
! AGGATCATTTTGTGTGAAGC+AGG + chr4_4:80500623-80500642 Msa0707260:CDS 40.0%
!! AGGGCTTTGAGAAATAACCT+CGG - chr4_4:80500686-80500705 None:intergenic 40.0%
GGCAGCTGAAGAAGTAATAA+GGG - chr4_4:80500705-80500724 None:intergenic 40.0%
TGGCAGCTGAAGAAGTAATA+AGG - chr4_4:80500706-80500725 None:intergenic 40.0%
! TAAGCATTTTAGACACGGCT+CGG - chr4_4:80500835-80500854 None:intergenic 40.0%
AGCATTAGTAGTACCCGTAA+GGG - chr4_4:80501065-80501084 None:intergenic 40.0%
AAGCATTAGTAGTACCCGTA+AGG - chr4_4:80501066-80501085 None:intergenic 40.0%
TTCTAGCAACGCAATGATAC+CGG - chr4_4:80501200-80501219 None:intergenic 40.0%
AGAAAATGTCCAAAGACGCA+AGG + chr4_4:80501299-80501318 Msa0707260:intron 40.0%
TAACTGTAACCTTGCGTCTT+TGG - chr4_4:80501311-80501330 None:intergenic 40.0%
! CTTCATAATAGTACCGGAGA+TGG - chr4_4:80501758-80501777 None:intergenic 40.0%
CATACAACAGATGCTAACAC+TGG - chr4_4:80501782-80501801 None:intergenic 40.0%
ATCTGTTGTATGTTGGTCCT+TGG + chr4_4:80501790-80501809 Msa0707260:three_prime_UTR 40.0%
TCTGTTGTATGTTGGTCCTT+GGG + chr4_4:80501791-80501810 Msa0707260:three_prime_UTR 40.0%
CTCATCCCCAATTTCTCCAT+TGG + chr4_4:80493254-80493273 Msa0707260:CDS 45.0%
GAATGTGTGAGAAGCTCCAA+TGG - chr4_4:80493273-80493292 None:intergenic 45.0%
GAACGAGATTTGGATTTGCG+TGG - chr4_4:80493321-80493340 None:intergenic 45.0%
GAAGCCATTGGAACGAGATT+TGG - chr4_4:80493331-80493350 None:intergenic 45.0%
TTCTTGGGAGTTGAAGCCAT+TGG - chr4_4:80493343-80493362 None:intergenic 45.0%
GGGAGATTGAAGAAGCTTCT+TGG - chr4_4:80493359-80493378 None:intergenic 45.0%
! TGAACGGAGGTTGGATTTTG+AGG - chr4_4:80493383-80493402 None:intergenic 45.0%
TGAGAATTGTGAACGGAGGT+TGG - chr4_4:80493392-80493411 None:intergenic 45.0%
CTACGTGTAGGTAAGGAATG+AGG - chr4_4:80493424-80493443 None:intergenic 45.0%
! ATTGGGGGTTATGGGAGTAT+CGG - chr4_4:80493464-80493483 None:intergenic 45.0%
TGAGATTCGGCAACGAGATT+GGG - chr4_4:80493481-80493500 None:intergenic 45.0%
TTGAGATTCGGCAACGAGAT+TGG - chr4_4:80493482-80493501 None:intergenic 45.0%
CAACAATCAACTCCGAGAAG+AGG + chr4_4:80493505-80493524 Msa0707260:CDS 45.0%
GTAAAGAAGAGGAAGCAGGA+AGG + chr4_4:80493727-80493746 Msa0707260:CDS 45.0%
GTTACAAGAGCTGGGAGAAA+AGG + chr4_4:80493886-80493905 Msa0707260:CDS 45.0%
! ACGGCGGTGAATTTGAAGTT+GGG + chr4_4:80493953-80493972 Msa0707260:CDS 45.0%
TGATGAGGAAGATCCAGAAG+TGG + chr4_4:80494014-80494033 Msa0707260:CDS 45.0%
ATCCAGAAGTGGAGGAATGT+AGG + chr4_4:80494025-80494044 Msa0707260:CDS 45.0%
AACCTACATTCCTCCACTTC+TGG - chr4_4:80494030-80494049 None:intergenic 45.0%
TCATGATTTCGTCCCCAGAA+CGG - chr4_4:80494059-80494078 None:intergenic 45.0%
TCAGGAACATCTTTCAACGG+TGG - chr4_4:80494129-80494148 None:intergenic 45.0%
CCGTTGAAAGATGTTCCTGA+AGG + chr4_4:80494129-80494148 Msa0707260:CDS 45.0%
AAGATGTTCCTGAAGGGGAT+TGG + chr4_4:80494136-80494155 Msa0707260:CDS 45.0%
CTGAAGGGGATTGGATATGT+GGG + chr4_4:80494145-80494164 Msa0707260:CDS 45.0%
TTGGATATGTGGGATCTGTG+AGG + chr4_4:80494155-80494174 Msa0707260:CDS 45.0%
TGGATATGTGGGATCTGTGA+GGG + chr4_4:80494156-80494175 Msa0707260:CDS 45.0%
ATCTGTGAGGGTCGTAAGAT+GGG + chr4_4:80494168-80494187 Msa0707260:CDS 45.0%
GGCTTCAATCAAGTGATCTG+TGG + chr4_4:80494253-80494272 Msa0707260:CDS 45.0%
ATCCCAGAAGAGACTTCTGT+TGG + chr4_4:80494453-80494472 Msa0707260:CDS 45.0%
TCCCAGAAGAGACTTCTGTT+GGG + chr4_4:80494454-80494473 Msa0707260:CDS 45.0%
GCTATATCGGACCAACGATT+TGG + chr4_4:80494503-80494522 Msa0707260:CDS 45.0%
ACAATCCATCACCTCGATGT+TGG - chr4_4:80494529-80494548 None:intergenic 45.0%
!! ACTCTGGAAAAGAGTACTCG+TGG + chr4_4:80494746-80494765 Msa0707260:intron 45.0%
ACGATCACGTCTCTACTTAC+AGG + chr4_4:80494972-80494991 Msa0707260:intron 45.0%
AAACTTTAGCATCCTTGGGC+TGG + chr4_4:80495026-80495045 Msa0707260:intron 45.0%
TAAACAAGTCAACCAGCCCA+AGG - chr4_4:80495041-80495060 None:intergenic 45.0%
AGTAGGATATCGCAGCTTGT+AGG + chr4_4:80495542-80495561 Msa0707260:intron 45.0%
GAGTCATGATGCACAACTAG+TGG + chr4_4:80495567-80495586 Msa0707260:intron 45.0%
TCATGATGCACAACTAGTGG+AGG + chr4_4:80495570-80495589 Msa0707260:intron 45.0%
CATGATGCACAACTAGTGGA+GGG + chr4_4:80495571-80495590 Msa0707260:intron 45.0%
!! CTAGCTTTGGCATACTCCTT+AGG - chr4_4:80495920-80495939 None:intergenic 45.0%
GTATGCCAAAGCTAGCAATG+AGG + chr4_4:80495925-80495944 Msa0707260:CDS 45.0%
! ATCTCCCTCATTGCTAGCTT+TGG - chr4_4:80495933-80495952 None:intergenic 45.0%
TACAGAATCTGCACAAGGGA+CGG + chr4_4:80496423-80496442 Msa0707260:intron 45.0%
CCTCTATATTCACGGTGTTC+CGG + chr4_4:80496735-80496754 Msa0707260:CDS 45.0%
CTCTATATTCACGGTGTTCC+GGG + chr4_4:80496736-80496755 Msa0707260:CDS 45.0%
TGAGTGTACTCTCAGTGATG+AGG + chr4_4:80496891-80496910 Msa0707260:CDS 45.0%
! TGGTCTGAAATTGGCTTCAC+CGG + chr4_4:80496973-80496992 Msa0707260:CDS 45.0%
GCATTAAATGGACACAGGGT+TGG + chr4_4:80497109-80497128 Msa0707260:CDS 45.0%
TAAATGGACACAGGGTTGGA+TGG + chr4_4:80497113-80497132 Msa0707260:CDS 45.0%
! CTCTCCGTTTGCTAAATGAG+AGG + chr4_4:80497143-80497162 Msa0707260:CDS 45.0%
AGGGAAGAAAACTGGAGAAG+AGG + chr4_4:80497174-80497193 Msa0707260:CDS 45.0%
!! GTTAGTTACCGACTGGTTTC+TGG - chr4_4:80497248-80497267 None:intergenic 45.0%
TCCTCGTATATCAAGCCGAA+TGG + chr4_4:80497617-80497636 Msa0707260:CDS 45.0%
CCTCGTATATCAAGCCGAAT+GGG + chr4_4:80497618-80497637 Msa0707260:CDS 45.0%
! ATCATTTCGAGTCGCCTCAA+TGG + chr4_4:80497690-80497709 Msa0707260:CDS 45.0%
AAGTGCCCGTGTGCATAAAA+TGG - chr4_4:80497799-80497818 None:intergenic 45.0%
!! CTTCAGGTTGCAGCTATATC+AGG + chr4_4:80497867-80497886 Msa0707260:intron 45.0%
! GATCCTGATAATGTTGCTGC+AGG + chr4_4:80497966-80497985 Msa0707260:CDS 45.0%
CGTGTCATCATAGGAGATAG+AGG + chr4_4:80498013-80498032 Msa0707260:intron 45.0%
GCAAGACCATCTAAAGGTAG+AGG - chr4_4:80498645-80498664 None:intergenic 45.0%
GGATCAGCAAGACCATCTAA+AGG - chr4_4:80498651-80498670 None:intergenic 45.0%
AAGCAACTCTTGGGGAAATC+AGG - chr4_4:80498788-80498807 None:intergenic 45.0%
CCGTTGTTACCTATGTGTGA+AGG + chr4_4:80499006-80499025 Msa0707260:intron 45.0%
GTTACCTATGTGTGAAGGCT+TGG + chr4_4:80499011-80499030 Msa0707260:intron 45.0%
! AAGCCTTATCCCACTATGTG+GGG - chr4_4:80499107-80499126 None:intergenic 45.0%
! CAAGCCTTATCCCACTATGT+GGG - chr4_4:80499108-80499127 None:intergenic 45.0%
TTCATTTGCATCTGCTCTCC+AGG + chr4_4:80499262-80499281 Msa0707260:intron 45.0%
ATGCAAACAAGTCCCTTTCC+TGG - chr4_4:80499283-80499302 None:intergenic 45.0%
! AGGAAAGGGACTTGTTTGCA+TGG + chr4_4:80499282-80499301 Msa0707260:intron 45.0%
!! AGATGTGACTGCTAGTCTTG+TGG + chr4_4:80499656-80499675 Msa0707260:intron 45.0%
GTGCACGAGCTTTACAAAAC+AGG + chr4_4:80499909-80499928 Msa0707260:CDS 45.0%
!! GGGGGAAACCACTTTTGAAA+AGG + chr4_4:80499935-80499954 Msa0707260:CDS 45.0%
TGAAAAAGAGCTGAGGACGA+AGG - chr4_4:80500065-80500084 None:intergenic 45.0%
ATGACGGTTTCATGTCTCTG+CGG + chr4_4:80500338-80500357 Msa0707260:CDS 45.0%
! AGCAATGGTGAAGTGTTTCC+TGG + chr4_4:80500362-80500381 Msa0707260:CDS 45.0%
CATGATATCCTCCTGCAAGT+TGG + chr4_4:80500386-80500405 Msa0707260:CDS 45.0%
! CAACTTTTGCAACCTGTGCT+TGG - chr4_4:80500651-80500670 None:intergenic 45.0%
!! GGGCTTTGAGAAATAACCTC+GGG - chr4_4:80500685-80500704 None:intergenic 45.0%
TTTGCAGTCTCTCAGCGAAA+AGG - chr4_4:80501619-80501638 None:intergenic 45.0%
GAGACTGCAAAGATCTACCT+TGG + chr4_4:80501628-80501647 Msa0707260:CDS 45.0%
ATACATAGACAGACCACCCA+AGG - chr4_4:80501810-80501829 None:intergenic 45.0%
GGGATGCAACAGGTAATACA+AGG - chr4_4:80501848-80501867 None:intergenic 45.0%
CTGTTGCATCCCACAAAAGA+GGG + chr4_4:80501856-80501875 Msa0707260:three_prime_UTR 45.0%
TGTTGCATCCCACAAAAGAG+GGG + chr4_4:80501857-80501876 Msa0707260:three_prime_UTR 45.0%
!! CGGAGGTTGGATTTTGAGGA+GGG - chr4_4:80493379-80493398 None:intergenic 50.0%
!! ACGGAGGTTGGATTTTGAGG+AGG - chr4_4:80493380-80493399 None:intergenic 50.0%
GAGGTGAGAATTGTGAACGG+AGG - chr4_4:80493396-80493415 None:intergenic 50.0%
GGTAAGGAATGAGGAGTGAG+AGG - chr4_4:80493415-80493434 None:intergenic 50.0%
CGTGGATCTACGTGTAGGTA+AGG - chr4_4:80493431-80493450 None:intergenic 50.0%
GCAACGAGATTGGGGGTTAT+GGG - chr4_4:80493472-80493491 None:intergenic 50.0%
AGATTCGGCAACGAGATTGG+GGG - chr4_4:80493479-80493498 None:intergenic 50.0%
GAGATTCGGCAACGAGATTG+GGG - chr4_4:80493480-80493499 None:intergenic 50.0%
CCGATTCTTCTCCCTCTTCT+CGG - chr4_4:80493520-80493539 None:intergenic 50.0%
CCGAGAAGAGGGAGAAGAAT+CGG + chr4_4:80493517-80493536 Msa0707260:CDS 50.0%
TCAAGACGAGATTTCGCAGC+TGG - chr4_4:80493556-80493575 None:intergenic 50.0%
TGGGAAGGGAGATTCCCTTA+AGG + chr4_4:80493780-80493799 Msa0707260:CDS 50.0%
CGGAGCGAACGAAACCTTAA+GGG - chr4_4:80493797-80493816 None:intergenic 50.0%
TCGGAGCGAACGAAACCTTA+AGG - chr4_4:80493798-80493817 None:intergenic 50.0%
ACAAGAGCTGGGAGAAAAGG+TGG + chr4_4:80493889-80493908 Msa0707260:CDS 50.0%
! GACGGCGGTGAATTTGAAGT+TGG + chr4_4:80493952-80493971 Msa0707260:CDS 50.0%
! CGGCGGTGAATTTGAAGTTG+GGG + chr4_4:80493954-80493973 Msa0707260:CDS 50.0%
TGAGGAAGATCCAGAAGTGG+AGG + chr4_4:80494017-80494036 Msa0707260:CDS 50.0%
CCACATATCCAATCCCCTTC+AGG - chr4_4:80494147-80494166 None:intergenic 50.0%
CCTGAAGGGGATTGGATATG+TGG + chr4_4:80494144-80494163 Msa0707260:CDS 50.0%
GATCTGTGAGGGTCGTAAGA+TGG + chr4_4:80494167-80494186 Msa0707260:CDS 50.0%
! TGATTTTCCAAAGCCGCCGA+AGG + chr4_4:80494200-80494219 Msa0707260:CDS 50.0%
! GATTTTCCAAAGCCGCCGAA+GGG + chr4_4:80494201-80494220 Msa0707260:CDS 50.0%
ACAAGCTTCTTACCCTTCGG+CGG - chr4_4:80494216-80494235 None:intergenic 50.0%
AAGAAGTGGATGGCAGCTAC+TGG + chr4_4:80494409-80494428 Msa0707260:CDS 50.0%
GCCCAACAGAAGTCTCTTCT+GGG - chr4_4:80494458-80494477 None:intergenic 50.0%
CTCGATGTTGGCCAAATCGT+TGG - chr4_4:80494517-80494536 None:intergenic 50.0%
! CAACGATTTGGCCAACATCG+AGG + chr4_4:80494515-80494534 Msa0707260:CDS 50.0%
TTTGGCCAACATCGAGGTGA+TGG + chr4_4:80494521-80494540 Msa0707260:intron 50.0%
! AGCGTTTGAAACTGTGCCAC+TGG - chr4_4:80495988-80496007 None:intergenic 50.0%
GTGGCACAGTTTCAAACGCT+TGG + chr4_4:80495988-80496007 Msa0707260:CDS 50.0%
CGAAGACTGGAACATCGACA+AGG + chr4_4:80496221-80496240 Msa0707260:CDS 50.0%
! GCAGCTAACTGATGGCTTGT+CGG - chr4_4:80496318-80496337 None:intergenic 50.0%
! GGGCGTTGCCTCTATATTCA+CGG + chr4_4:80496727-80496746 Msa0707260:CDS 50.0%
CCGGAACACCGTGAATATAG+AGG - chr4_4:80496738-80496757 None:intergenic 50.0%
TCGGAACCATAAGGCAACCA+AGG - chr4_4:80497059-80497078 None:intergenic 50.0%
ACACAGGGTTGGATGGAAAG+AGG + chr4_4:80497120-80497139 Msa0707260:CDS 50.0%
!! AGCTTGGAATGTGGCTTGGT+TGG - chr4_4:80497382-80497401 None:intergenic 50.0%
! CCCATTCGGCTTGATATACG+AGG - chr4_4:80497621-80497640 None:intergenic 50.0%
AAAGCCTCTGGATGCCCATT+CGG - chr4_4:80497635-80497654 None:intergenic 50.0%
! ATGCACACGGGCACTTCTTT+TGG + chr4_4:80497803-80497822 Msa0707260:intron 50.0%
AGACTAGAGTTCAGTCTGGC+AGG - chr4_4:80498705-80498724 None:intergenic 50.0%
CTTATCCCACTATGTGGGGT+CGG - chr4_4:80499103-80499122 None:intergenic 50.0%
! CCAAGCCTTATCCCACTATG+TGG - chr4_4:80499109-80499128 None:intergenic 50.0%
! CCACATAGTGGGATAAGGCT+TGG + chr4_4:80499106-80499125 Msa0707260:intron 50.0%
TTGCATCTGCTCTCCAGGAA+AGG + chr4_4:80499267-80499286 Msa0707260:intron 50.0%
TGCATCTGCTCTCCAGGAAA+GGG + chr4_4:80499268-80499287 Msa0707260:intron 50.0%
! CACAGTCAAGACTGCTGCTT+AGG - chr4_4:80499434-80499453 None:intergenic 50.0%
TCTTGTGGACCAGCGATCAT+AGG + chr4_4:80499671-80499690 Msa0707260:intron 50.0%
CTTGTGGACCAGCGATCATA+GGG + chr4_4:80499672-80499691 Msa0707260:intron 50.0%
TTCCTATGCCCTATGATCGC+TGG - chr4_4:80499683-80499702 None:intergenic 50.0%
TGCAGGAGGATATCATGTCC+AGG - chr4_4:80500383-80500402 None:intergenic 50.0%
AGTCTTACCCAACTTGCAGG+AGG - chr4_4:80500397-80500416 None:intergenic 50.0%
! GCTGTAAGTTGGGTGAGTGT+AGG + chr4_4:80500603-80500622 Msa0707260:intron 50.0%
AGTTGCAGCTCAATTTCCCG+AGG + chr4_4:80500666-80500685 Msa0707260:CDS 50.0%
CAAACACTTAAGTGAGGCGC+AGG + chr4_4:80501140-80501159 Msa0707260:intron 50.0%
AAAAGGCTGTTGCACAGGGA+GGG - chr4_4:80501267-80501286 None:intergenic 50.0%
TAAAAGGCTGTTGCACAGGG+AGG - chr4_4:80501268-80501287 None:intergenic 50.0%
GTTGTATGTTGGTCCTTGGG+TGG + chr4_4:80501794-80501813 Msa0707260:three_prime_UTR 50.0%
! CCTCTTTTGTGGGATGCAAC+AGG - chr4_4:80501858-80501877 None:intergenic 50.0%
CCTGTTGCATCCCACAAAAG+AGG + chr4_4:80501855-80501874 Msa0707260:three_prime_UTR 50.0%
! CTGAGATGCCCCTCTTTTGT+GGG - chr4_4:80501868-80501887 None:intergenic 50.0%
TGCGAGCTAGGGTTTGATGG+AGG - chr4_4:80493295-80493314 None:intergenic 55.0%
AGCTGCGAGCTAGGGTTTGA+TGG - chr4_4:80493298-80493317 None:intergenic 55.0%
AAGCGCGTGGATCTACGTGT+AGG - chr4_4:80493436-80493455 None:intergenic 55.0%
! AGTATCGGAGTTCAAGCGCG+TGG - chr4_4:80493449-80493468 None:intergenic 55.0%
GGCAACGAGATTGGGGGTTA+TGG - chr4_4:80493473-80493492 None:intergenic 55.0%
TTCTTACCCTTCGGCGGCTT+TGG - chr4_4:80494210-80494229 None:intergenic 55.0%
TGGATGGCAGCTACTGGTGT+CGG + chr4_4:80494415-80494434 Msa0707260:CDS 55.0%
CGCCCAACAGAAGTCTCTTC+TGG - chr4_4:80494459-80494478 None:intergenic 55.0%
AGAGTGACGGTGACGAAGAC+TGG + chr4_4:80496208-80496227 Msa0707260:CDS 55.0%
! GCTAACTGATGGCTTGTCGG+TGG - chr4_4:80496315-80496334 None:intergenic 55.0%
CTGCACAAGGGACGGTTCTT+TGG + chr4_4:80496431-80496450 Msa0707260:CDS 55.0%
GATAGTACCTTGCCAGTGCC+CGG - chr4_4:80496757-80496776 None:intergenic 55.0%
ATGGGGCAAAGCAAAGCCTC+TGG - chr4_4:80497647-80497666 None:intergenic 55.0%
TTGGGCCTCTTGAGTGTGCA+CGG + chr4_4:80498757-80498776 Msa0707260:intron 55.0%
TGTAGCCGTGCACACTCAAG+AGG - chr4_4:80498765-80498784 None:intergenic 55.0%
ACTATGTGGGGTCGGCTACA+TGG - chr4_4:80499095-80499114 None:intergenic 55.0%
ATGTAGCCGACCCCACATAG+TGG + chr4_4:80499094-80499113 Msa0707260:intron 55.0%
TGTAGCCGACCCCACATAGT+GGG + chr4_4:80499095-80499114 Msa0707260:intron 55.0%
! CGACCCCACATAGTGGGATA+AGG + chr4_4:80499101-80499120 Msa0707260:intron 55.0%
GACCAGCGATCATAGGGCAT+AGG + chr4_4:80499678-80499697 Msa0707260:intron 55.0%
TCATGTCTCTGCGGCAGCAA+TGG + chr4_4:80500347-80500366 Msa0707260:CDS 55.0%
GTTTCTGCGTTGAAGTGGCC+TGG + chr4_4:80500435-80500454 Msa0707260:intron 55.0%
TGCGTTGAAGTGGCCTGGAA+GGG + chr4_4:80500440-80500459 Msa0707260:intron 55.0%
AAAGGCTGTTGCACAGGGAG+GGG - chr4_4:80501266-80501285 None:intergenic 55.0%
! GCTGAGATGCCCCTCTTTTG+TGG - chr4_4:80501869-80501888 None:intergenic 55.0%
TTGCGTGGAGCTGCGAGCTA+GGG - chr4_4:80493306-80493325 None:intergenic 60.0%
TTTGCGTGGAGCTGCGAGCT+AGG - chr4_4:80493307-80493326 None:intergenic 60.0%
TCCGACGTCGCCGGATCAAT+CGG + chr4_4:80493813-80493832 Msa0707260:CDS 60.0%
TCCGATTGATCCGGCGACGT+CGG - chr4_4:80493817-80493836 None:intergenic 60.0%
! TGTGGGCTGCTCGCATTGAG+AGG + chr4_4:80494271-80494290 Msa0707260:CDS 60.0%
GGATGGCAGCTACTGGTGTC+GGG + chr4_4:80494416-80494435 Msa0707260:CDS 60.0%
! GCAGCTACTGGTGTCGGGTA+CGG + chr4_4:80494421-80494440 Msa0707260:CDS 60.0%
ATTCACGGTGTTCCGGGCAC+TGG + chr4_4:80496742-80496761 Msa0707260:CDS 60.0%
CAAGCCGAATGGGCATCCAG+AGG + chr4_4:80497628-80497647 Msa0707260:CDS 60.0%
AGGAGATGCACGCCGTGCTT+TGG + chr4_4:80497887-80497906 Msa0707260:CDS 60.0%
GCTCGTGCACCATAGCTGTC+AGG - chr4_4:80499899-80499918 None:intergenic 60.0%
CTGCGTTGAAGTGGCCTGGA+AGG + chr4_4:80500439-80500458 Msa0707260:intron 60.0%
AGTGGCCTGGAAGGGAGAAC+CGG + chr4_4:80500448-80500467 Msa0707260:intron 60.0%
GTGAAGCAGGTGCCAAGCAC+AGG + chr4_4:80500636-80500655 Msa0707260:CDS 60.0%
TTCGTTCGCTCCGACGTCGC+CGG + chr4_4:80493804-80493823 Msa0707260:CDS 65.0%
! GCTACTGGTGTCGGGTACGG+TGG + chr4_4:80494424-80494443 Msa0707260:CDS 65.0%
GTGGCCTGGAAGGGAGAACC+GGG + chr4_4:80500449-80500468 Msa0707260:intron 65.0%
TGGCCTGGAAGGGAGAACCG+GGG + chr4_4:80500450-80500469 Msa0707260:intron 65.0%
! AGAACCGGGGGGTGGTGGTT+GGG + chr4_4:80500463-80500482 Msa0707260:intron 65.0%
!! CGGTGTTCCGGGCACTGGCA+AGG + chr4_4:80496747-80496766 Msa0707260:CDS 70.0%
GGCCTGGAAGGGAGAACCGG+GGG + chr4_4:80500451-80500470 Msa0707260:intron 70.0%
GCCTGGAAGGGAGAACCGGG+GGG + chr4_4:80500452-80500471 Msa0707260:intron 70.0%
ACCCCCCGGTTCTCCCTTCC+AGG - chr4_4:80500456-80500475 None:intergenic 70.0%
TGGAAGGGAGAACCGGGGGG+TGG + chr4_4:80500455-80500474 Msa0707260:intron 70.0%
AAGGGAGAACCGGGGGGTGG+TGG + chr4_4:80500458-80500477 Msa0707260:intron 70.0%
! GAGAACCGGGGGGTGGTGGT+TGG + chr4_4:80500462-80500481 Msa0707260:intron 70.0%
! GAACCGGGGGGTGGTGGTTG+GGG + chr4_4:80500464-80500483 Msa0707260:intron 70.0%
! AACCGGGGGGTGGTGGTTGG+GGG + chr4_4:80500465-80500484 Msa0707260:intron 70.0%
! ACCGGGGGGTGGTGGTTGGG+GGG + chr4_4:80500466-80500485 Msa0707260:intron 75.0%
! CCCCCCCAACCACCACCCCC+CGG - chr4_4:80500470-80500489 None:intergenic 80.0%
!! CCGGGGGGTGGTGGTTGGGG+GGG + chr4_4:80500467-80500486 Msa0707260:intron 80.0%
!! CGGGGGGTGGTGGTTGGGGG+GGG + chr4_4:80500468-80500487 Msa0707260:intron 80.0%
!! GGGGGGTGGTGGTTGGGGGG+GGG + chr4_4:80500469-80500488 Msa0707260:intron 80.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 80493232 80501953 80493232 ID=Msa0707260;Name=Msa0707260
chr4_4 mRNA 80493232 80501953 80493232 ID=Msa0707260-mRNA-1;Parent=Msa0707260;Name=Msa0707260-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.86|0.75|1|1|1|16|282|928
chr4_4 exon 80493232 80494292 80493232 ID=Msa0707260-mRNA-1:exon:26171;Parent=Msa0707260-mRNA-1
chr4_4 exon 80494401 80494536 80494401 ID=Msa0707260-mRNA-1:exon:26172;Parent=Msa0707260-mRNA-1
chr4_4 exon 80495881 80496033 80495881 ID=Msa0707260-mRNA-1:exon:26173;Parent=Msa0707260-mRNA-1
chr4_4 exon 80496198 80496338 80496198 ID=Msa0707260-mRNA-1:exon:26174;Parent=Msa0707260-mRNA-1
chr4_4 exon 80496428 80496579 80496428 ID=Msa0707260-mRNA-1:exon:26175;Parent=Msa0707260-mRNA-1
chr4_4 exon 80496669 80496768 80496669 ID=Msa0707260-mRNA-1:exon:26176;Parent=Msa0707260-mRNA-1
chr4_4 exon 80496887 80497009 80496887 ID=Msa0707260-mRNA-1:exon:26177;Parent=Msa0707260-mRNA-1
chr4_4 exon 80497097 80497258 80497097 ID=Msa0707260-mRNA-1:exon:26178;Parent=Msa0707260-mRNA-1
chr4_4 exon 80497355 80497412 80497355 ID=Msa0707260-mRNA-1:exon:26179;Parent=Msa0707260-mRNA-1
chr4_4 exon 80497580 80497770 80497580 ID=Msa0707260-mRNA-1:exon:26180;Parent=Msa0707260-mRNA-1
chr4_4 exon 80497873 80497987 80497873 ID=Msa0707260-mRNA-1:exon:26181;Parent=Msa0707260-mRNA-1
chr4_4 exon 80499284 80499354 80499284 ID=Msa0707260-mRNA-1:exon:26182;Parent=Msa0707260-mRNA-1
chr4_4 exon 80499861 80499956 80499861 ID=Msa0707260-mRNA-1:exon:26183;Parent=Msa0707260-mRNA-1
chr4_4 exon 80500332 80500408 80500332 ID=Msa0707260-mRNA-1:exon:26184;Parent=Msa0707260-mRNA-1
chr4_4 exon 80500604 80500687 80500604 ID=Msa0707260-mRNA-1:exon:26185;Parent=Msa0707260-mRNA-1
chr4_4 exon 80501605 80501953 80501605 ID=Msa0707260-mRNA-1:exon:26186;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80493232 80494292 80493232 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80494401 80494536 80494401 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80495881 80496033 80495881 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80496198 80496338 80496198 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80496428 80496579 80496428 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80496669 80496768 80496669 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80496887 80497009 80496887 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80497097 80497258 80497097 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80497355 80497412 80497355 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80497580 80497770 80497580 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80497873 80497987 80497873 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80499284 80499354 80499284 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80499861 80499956 80499861 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80500332 80500408 80500332 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80500604 80500687 80500604 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 CDS 80501605 80501671 80501605 ID=Msa0707260-mRNA-1:cds;Parent=Msa0707260-mRNA-1
chr4_4 three_prime_UTR 80501672 80501953 80501672 ID=Msa0707260-mRNA-1:three_prime_utr;Parent=Msa0707260-mRNA-1
Gene Sequence

>Msa0707260

TTGGCGCCATTTTTCCTATATACTCATCCCCAATTTCTCCATTGGAGCTTCTCACACATTCCTCCATCAAACCCTAGCTCGCAGCTCCACGCAAATCCAAATCTCGTTCCAATGGCTTCAACTCCCAAGAAGCTTCTTCAATCTCCCTCCTCAAAATCCAACCTCCGTTCACAATTCTCACCTCTCACTCCTCATTCCTTACCTACACGTAGATCCACGCGCTTGAACTCCGATACTCCCATAACCCCCAATCTCGTTGCCGAATCTCAAATTCAACAATCAACTCCGAGAAGAGGGAGAAGAATCGGTGAGAATTCTGTTCCAGCTGCGAAATCTCGTCTTGATTTCACTCGAAAAGATAAAGCTGTAACTCACAATAGTTCAATTAAAGTAGAAAATGAAATTGATTCTGCTCTATTTCTGAAGAAGAGAAGTCGGAAAGCTGAATCCGATGAAATTGCATTTGCTCCAAAATCGCCAGATTCATCGAAATCTGTAAAGAAGAGGAAGCAGGAAGGTGAAAAAACGGCTGAATTGAAGAAGAGAAATGGGAAGGGAGATTCCCTTAAGGTTTCGTTCGCTCCGACGTCGCCGGATCAATCGGAAACTAAGAAGAGAAAGAGGAAGAATGAGGTCAAGGTTGAGAAAACGGTTGTTACAAGAGCTGGGAGAAAAGGTGGAAAGATTGCGAAGGTGCAGTATTACAAGAAAGTTGTTTATGACGGCGGTGAATTTGAAGTTGGGGATGATGTTTATGTGAAGAGGAGAGAAGATGCTACTTCTGATGAGGAAGATCCAGAAGTGGAGGAATGTAGGTTTTGTTTCCGTTCTGGGGACGAAATCATGATTGAGTGTGATAGTTGTTTAGGTGGGTTTCATTTGAAATGTTTGACACCACCGTTGAAAGATGTTCCTGAAGGGGATTGGATATGTGGGATCTGTGAGGGTCGTAAGATGGGTAAAGATGTTGATTTTCCAAAGCCGCCGAAGGGTAAGAAGCTTGTTAGAACAATGCGTCAGAGGCTTCAATCAAGTGATCTGTGGGCTGCTCGCATTGAGAGTATATGGAAAGAAGTGGATGGCAGCTACTGGTGTCGGGTACGGTGGTATATGATCCCAGAAGAGACTTCTGTTGGGCGACAACCACATAATTTGAGCAGAGAGCTATATCGGACCAACGATTTGGCCAACATCGAGATGGAATCTGTCCTTCGACATTGCTATGTCATGATCCCTAAGGAGTATGCCAAAGCTAGCAATGAGGGAGATGATGTTTTCTTGTGTGAATATGAATATGACATCCAGTGGCACAGTTTCAAACGCTTGGCTGACATTGATGATGAAAGAGAGAATTCTGATGAGAGTGACGGTGACGAAGACTGGAACATCGACAAGGAATCAGACTCTGACACAGATGAAGATGTTGAATATGATGAGGAAAATATTAAAATTTCACAATCGCAACCACCGACAAGCCATCAGTTAGCTGCAAATCTGCACAAGGGACGGTTCTTTGGACTTCAGAAGATAGGCACAAAAAGAATTCCAGAGCATATAAGGTCTCACAAACAGACTAATCTTGAAAGAGCAAAGGCATCATTGCTGTTAGCTTCGCTGCCTAAGTCTTTACCTTGTAGAAATAAAGAAATGGACGAGATAACGACATTCATCAAAGGTGCTATTTCTGACAATCAATGTCTGGGGCGTTGCCTCTATATTCACGGTGTTCCGGGCACTGGCAAGACAATGAGTGTACTCTCAGTGATGAGGAGTTTGAAGTCAGAAGTTGATGCAGGAAACATCAAACCATACTGTTTCGTGGAGATCAATGGTCTGAAATTGGCTTCACCGGAGAATATTTACAAGGTCATATATGAAGCATTAAATGGACACAGGGTTGGATGGAAAGAGGCTCTCCGTTTGCTAAATGAGAGGTTTGTAGAAGGGAAGAAAACTGGAGAAGAGGCTGACCGACCATGTATTTTGCTCATTGACGAACTTGATCTTCTTGTAACCAGAAACCAGTCGGTTCTGTACAATATTCTTGACTGGCCAACCAAGCCACATTCCAAGCTAATTGTGATAGGGATAGCAAATACAATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGCCGAATGGGCATCCAGAGGCTTTGCTTTGCCCCATATAATTATCAGCAGCTTCAAGAAATCATTTCGAGTCGCCTCAATGGAATTGATATATTTGAAAAACAAGCTATGGAATTTGCTTCAAGAAAGTTTAGTCTCCAAGTTGCAGCTATATCAGGAGATGCACGCCGTGCTTTGGAAATATGCAGACGTGCAGCTGAAATTGCAGATTATCGAATGAAGAAGCTAGCTTCAGATCCTGATAATGTTGCTGCAGGAAAGGGACTTGTTTGCATGGCAGACGTTGAATCAGCTATTCAAGAAATGTTCCAAGCACCTCATATTCAAGTGATGAAAAACTGTTCCAGACTTGGCAAAATTTTCCTGACAGCTATGGTGCACGAGCTTTACAAAACAGGAATGGGGGAAACCACTTTTGAAAAGTTGGCAATGACGGTTTCATGTCTCTGCGGCAGCAATGGTGAAGTGTTTCCTGGACATGATATCCTCCTGCAAGTTGGCTGTAAGTTGGGTGAGTGTAGGATCATTTTGTGTGAAGCAGGTGCCAAGCACAGGTTGCAAAAGTTGCAGCTCAATTTCCCGAGCGATGATGTAGCCTTTTCGCTGAGAGACTGCAAAGATCTACCTTGGCTGTCCAAATATCTAATGTAA
Protein sequence

>Msa0707260

LAPFFLYTHPQFLHWSFSHIPPSNPSSQLHANPNLVPMASTPKKLLQSPSSKSNLRSQFSPLTPHSLPTRRSTRLNSDTPITPNLVAESQIQQSTPRRGRRIGENSVPAAKSRLDFTRKDKAVTHNSSIKVENEIDSALFLKKRSRKAESDEIAFAPKSPDSSKSVKKRKQEGEKTAELKKRNGKGDSLKVSFAPTSPDQSETKKRKRKNEVKVEKTVVTRAGRKGGKIAKVQYYKKVVYDGGEFEVGDDVYVKRREDATSDEEDPEVEECRFCFRSGDEIMIECDSCLGGFHLKCLTPPLKDVPEGDWICGICEGRKMGKDVDFPKPPKGKKLVRTMRQRLQSSDLWAARIESIWKEVDGSYWCRVRWYMIPEETSVGRQPHNLSRELYRTNDLANIEMESVLRHCYVMIPKEYAKASNEGDDVFLCEYEYDIQWHSFKRLADIDDERENSDESDGDEDWNIDKESDSDTDEDVEYDEENIKISQSQPPTSHQLAANLHKGRFFGLQKIGTKRIPEHIRSHKQTNLERAKASLLLASLPKSLPCRNKEMDEITTFIKGAISDNQCLGRCLYIHGVPGTGKTMSVLSVMRSLKSEVDAGNIKPYCFVEINGLKLASPENIYKVIYEALNGHRVGWKEALRLLNERFVEGKKTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFAPYNYQQLQEIISSRLNGIDIFEKQAMEFASRKFSLQVAAISGDARRALEICRRAAEIADYRMKKLASDPDNVAAGKGLVCMADVESAIQEMFQAPHIQVMKNCSRLGKIFLTAMVHELYKTGMGETTFEKLAMTVSCLCGSNGEVFPGHDILLQVGCKLGECRIILCEAGAKHRLQKLQLNFPSDDVAFSLRDCKDLPWLSKYLM*