AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0142610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0142610 MtrunA17_Chr2g0286661 96.697 757 25 0 10 766 2 758 0.0 1520
Msa0142610 MtrunA17_Chr1g0194121 27.607 326 199 11 289 600 447 749 1.70e-28 122
Msa0142610 MtrunA17_Chr1g0194121 48.315 89 46 0 96 184 132 220 2.82e-21 99.8
Msa0142610 MtrunA17_Chr7g0270541 26.176 340 213 10 292 617 449 764 1.35e-25 113
Msa0142610 MtrunA17_Chr7g0270541 46.809 94 48 1 98 189 130 223 6.68e-22 101
Msa0142610 MtrunA17_Chr1g0162871 29.880 251 159 5 280 521 449 691 2.90e-25 112
Msa0142610 MtrunA17_Chr1g0162871 38.323 167 82 6 48 203 41 197 1.95e-22 103
Msa0142610 MtrunA17_Chr2g0302791 24.688 401 266 9 292 679 465 842 5.29e-24 108
Msa0142610 MtrunA17_Chr2g0302791 48.958 96 47 1 98 191 124 219 6.45e-22 101
Msa0142610 MtrunA17_Chr8g0334671 55.000 80 36 0 105 184 181 260 7.33e-24 103
Msa0142610 MtrunA17_Chr4g0046991 56.410 78 34 0 111 188 73 150 2.52e-23 97.1
Msa0142610 MtrunA17_Chr3g0122411 37.956 137 82 2 96 230 150 285 4.48e-22 100
Msa0142610 MtrunA17_Chr7g0258471 46.512 86 46 0 99 184 130 215 4.64e-22 99.8
Msa0142610 MtrunA17_Chr5g0420051 48.913 92 46 1 98 188 167 258 4.87e-22 99.8
Msa0142610 MtrunA17_Chr7g0231911 54.217 83 38 0 107 189 145 227 5.92e-22 97.4
Msa0142610 MtrunA17_Chr8g0386271 47.727 88 45 1 98 184 85 172 1.94e-21 97.4
Msa0142610 MtrunA17_Chr7g0224821 45.977 87 47 0 98 184 64 150 2.45e-21 96.7
Msa0142610 MtrunA17_Chr2g0308321 47.253 91 47 1 98 187 157 247 2.57e-21 98.6
Msa0142610 MtrunA17_Chr4g0061651 47.872 94 46 2 98 190 112 203 2.59e-21 98.2
Msa0142610 MtrunA17_Chr8g0360361 40.385 104 62 0 111 214 65 168 1.38e-19 87.0
Msa0142610 MtrunA17_Chr2g0282521 43.956 91 51 0 98 188 51 141 2.20e-19 85.5
Msa0142610 MtrunA17_Chr8g0377401 52.055 73 35 0 111 183 162 234 3.93e-19 87.8
Msa0142610 MtrunA17_Chr8g0377421 40.833 120 60 2 82 190 95 214 4.65e-19 89.0
Msa0142610 MtrunA17_Chr3g0132091 43.478 92 52 0 93 184 55 146 7.80e-19 89.0
Msa0142610 MtrunA17_Chr8g0377431 45.070 71 39 0 96 166 136 206 6.95e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0142610 AT5G18830.1 46.028 793 367 16 16 760 15 794 0.0 660
Msa0142610 AT5G18830.3 46.028 793 367 16 16 760 15 794 0.0 659
Msa0142610 AT5G18830.2 45.583 781 362 13 16 760 15 768 0.0 657
Msa0142610 AT1G76580.1 28.629 248 162 4 280 520 482 721 6.53e-25 111
Msa0142610 AT1G76580.1 41.905 105 58 1 110 214 113 214 1.23e-21 101
Msa0142610 AT1G53160.3 49.020 102 47 2 96 192 34 135 8.82e-25 102
Msa0142610 AT2G33810.1 47.826 92 48 0 97 188 40 131 5.12e-24 98.6
Msa0142610 AT1G02065.1 51.613 93 44 1 103 195 180 271 6.44e-24 103
Msa0142610 AT1G69170.1 48.421 95 49 0 93 187 106 200 1.80e-23 104
Msa0142610 AT2G47070.1 51.042 96 40 2 90 184 90 179 1.85e-23 107
Msa0142610 AT2G47070.1 27.385 325 190 10 292 602 360 652 4.31e-22 102
Msa0142610 AT1G27360.2 53.333 75 35 0 110 184 174 248 1.04e-22 101
Msa0142610 AT1G27360.1 53.333 75 35 0 110 184 174 248 1.04e-22 101
Msa0142610 AT1G27360.3 53.333 75 35 0 110 184 174 248 1.04e-22 101
Msa0142610 AT1G27360.4 53.333 75 35 0 110 184 174 248 1.04e-22 101
Msa0142610 AT1G27370.6 46.392 97 52 0 88 184 153 249 1.09e-22 100
Msa0142610 AT3G57920.1 45.714 105 55 2 89 191 35 139 1.27e-22 100
Msa0142610 AT1G27370.1 46.392 97 52 0 88 184 153 249 1.43e-22 101
Msa0142610 AT1G27370.5 46.392 97 52 0 88 184 153 249 1.43e-22 101
Msa0142610 AT1G27370.3 46.392 97 52 0 88 184 153 249 1.43e-22 101
Msa0142610 AT1G27370.2 46.392 97 52 0 88 184 153 249 1.43e-22 101
Msa0142610 AT1G27370.4 46.392 97 52 0 88 184 153 249 1.43e-22 101
Msa0142610 AT1G27370.7 46.392 97 52 0 88 184 153 249 1.43e-22 101
Msa0142610 AT3G60030.1 55.696 79 35 0 111 189 127 205 1.49e-22 103
Msa0142610 AT3G60030.1 25.305 328 201 11 289 602 398 695 2.77e-19 93.6
Msa0142610 AT1G53160.2 45.000 120 56 3 96 205 34 153 1.91e-22 95.5
Msa0142610 AT1G53160.1 45.000 120 56 3 96 205 34 153 1.91e-22 95.5
Msa0142610 AT1G20980.1 42.857 119 64 1 95 209 104 222 5.98e-22 102
Msa0142610 AT1G20980.1 24.779 339 225 8 280 606 485 805 4.64e-21 99.4
Msa0142610 AT2G47070.2 27.385 325 190 10 292 602 231 523 6.89e-22 101
Msa0142610 AT2G47070.2 56.250 48 21 0 137 184 3 50 4.17e-12 70.5
Msa0142610 AT1G76580.3 41.905 105 58 1 110 214 113 214 6.97e-22 101
Msa0142610 AT1G76580.3 30.682 176 114 2 280 448 482 656 5.48e-21 98.6
Msa0142610 AT1G76580.2 41.905 105 58 1 110 214 113 214 7.52e-22 101
Msa0142610 AT1G76580.2 30.682 176 114 2 280 448 482 656 4.37e-21 99.0
Msa0142610 AT5G43270.3 53.247 77 36 0 108 184 166 242 1.97e-21 98.2
Msa0142610 AT5G43270.1 53.247 77 36 0 108 184 166 242 1.97e-21 98.2
Msa0142610 AT5G43270.2 53.247 77 36 0 108 184 166 242 1.97e-21 98.2
Msa0142610 AT3G15270.1 53.165 79 37 0 111 189 63 141 2.82e-20 89.7
Msa0142610 AT5G50570.1 50.000 74 37 0 111 184 101 174 5.23e-20 93.2
Msa0142610 AT5G50570.2 50.000 74 37 0 111 184 101 174 5.23e-20 93.2
Msa0142610 AT5G50670.1 50.000 74 37 0 111 184 101 174 5.23e-20 93.2
Msa0142610 AT5G50670.2 50.000 74 37 0 111 184 101 174 5.23e-20 93.2
Msa0142610 AT2G42200.1 52.000 75 36 0 110 184 73 147 9.84e-19 89.4
Msa0142610 AT1G02065.2 48.214 56 29 0 103 158 180 235 1.23e-11 65.9

Find 197 sgRNAs with CRISPR-Local

Find 503 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATGATTCAACTATCATTT+TGG 0.092702 1_4:-1560205 Msa0142610:CDS
TCTTCCAGATAGCATCTTTC+TGG 0.114884 1_4:+1563623 None:intergenic
AACTTTATTCCTGTACTTAT+TGG 0.134941 1_4:-1560486 Msa0142610:CDS
ACATTTATCCACATAATATT+TGG 0.170789 1_4:+1564073 None:intergenic
ATACCTTCAACCCATAAAAT+TGG 0.177084 1_4:+1558896 None:intergenic
GTTGATATTTCTGAGCTTAA+AGG 0.179143 1_4:-1565459 Msa0142610:CDS
CGCTGTCACCGTTAATATTC+TGG 0.195200 1_4:+1564573 None:intergenic
TTTGTTATGCTTATCAAATT+TGG 0.209664 1_4:+1560171 None:intergenic
ACTTTATTCCTGTACTTATT+GGG 0.226415 1_4:-1560485 Msa0142610:CDS
GAAGAAGAACCGGTTGTTAA+TGG 0.267583 1_4:-1564614 Msa0142610:CDS
ACTTGGAGCCGCAGCCTTCT+TGG 0.274103 1_4:+1564285 None:intergenic
TTGGGATTGGGATTGGGATT+GGG 0.276363 1_4:+1565791 None:intergenic
AAAGGATATTATAATGAATA+TGG 0.277893 1_4:-1559262 Msa0142610:CDS
TTGGGATTGGGATTGAGGTT+TGG 0.287122 1_4:+1565803 None:intergenic
CTCTCCTTTCTAAACAATTT+CGG 0.289124 1_4:-1560410 Msa0142610:CDS
CAACTGATAACTTGGCGTTT+TGG 0.290551 1_4:+1560004 None:intergenic
AGGTTTGAAGCCTTCCATTT+TGG 0.297680 1_4:+1560041 None:intergenic
GGCTGCATCGGCGCGTTGTC+AGG 0.298075 1_4:-1565496 Msa0142610:CDS
CATGTCAACATCACTTATAT+TGG 0.320229 1_4:+1560137 None:intergenic
TTAACCTCGGGTCACGCTTT+CGG 0.322042 1_4:+1565628 None:intergenic
TGGGATTGGGATTGGGATTG+AGG 0.331314 1_4:+1565798 None:intergenic
GCTGAAACACAAGCGAATAT+TGG 0.331955 1_4:-1564530 Msa0142610:CDS
ACGGAGTTGTAGAAGGAAAT+TGG 0.333246 1_4:-1565206 Msa0142610:CDS
CCGAAGATCTCTCCTCCGTT+TGG 0.333564 1_4:-1565743 Msa0142610:CDS
TCGGCGCGTTGTCAGGTTCC+TGG 0.339982 1_4:-1565489 Msa0142610:CDS
TCTAACAAAGCATCGAGTTC+GGG 0.348406 1_4:+1565564 None:intergenic
TAAAAGAAACCCGGCCTGTT+TGG 0.355695 1_4:+1564337 None:intergenic
GCTACTACTGTTGTTCTTGA+TGG 0.355747 1_4:-1565396 Msa0142610:CDS
CTGTAGGTTGAGAATGAGTC+TGG 0.356081 1_4:-1560516 Msa0142610:intron
AATTGATTGGGATTGGGATT+GGG 0.360219 1_4:+1565785 None:intergenic
TCAAAGATATTGCTATTTGT+TGG 0.367649 1_4:-1560241 Msa0142610:CDS
GACTGCCCGCGCGGCTGCAT+CGG 0.372733 1_4:-1565508 Msa0142610:CDS
TCCTAGTTCTCCATCACAAT+TGG 0.372983 1_4:+1565093 None:intergenic
GAATTGATTGGGATTGGGAT+TGG 0.376980 1_4:+1565784 None:intergenic
TCTGGATCAGGGTTAGAGTT+TGG 0.377437 1_4:+1565666 None:intergenic
TAAGAGTGATTATTCGTCTA+TGG 0.379736 1_4:-1564462 Msa0142610:intron
ACTCTGCATCTGCTCTAAAC+TGG 0.380253 1_4:+1559343 None:intergenic
CGAAGATCTCTCCTCCGTTT+GGG 0.382192 1_4:-1565742 Msa0142610:CDS
ATTGGGATTGGGATTGGGAT+TGG 0.383903 1_4:+1565790 None:intergenic
GTTGAACAAACACCTTCTAA+TGG 0.384218 1_4:+1559089 None:intergenic
CTAAATAAATAGATGTCATT+AGG 0.385367 1_4:-1559006 Msa0142610:three_prime_UTR
TTCTAACAAAGCATCGAGTT+CGG 0.397622 1_4:+1565563 None:intergenic
ACTTGCTGCGGCCCAAGTTT+CGG 0.398259 1_4:-1563247 Msa0142610:intron
GGTGGTGGTTAGAAAGTTGT+TGG 0.399948 1_4:+1565874 None:intergenic
AAACAATTTCGGTCTGCATC+TGG 0.400091 1_4:-1560399 Msa0142610:CDS
GAGGGAGAATTGATTGGGAT+TGG 0.402173 1_4:+1565778 None:intergenic
TACCTTCAACCCATAAAATT+GGG 0.402247 1_4:+1558897 None:intergenic
TTAGAAAGTTGTTGGATGTT+TGG 0.403104 1_4:+1565882 None:intergenic
CCAGAGACCCAGAATATTAA+CGG 0.418853 1_4:-1564581 Msa0142610:CDS
CCATTGGAGGGAGAATTGAT+TGG 0.421524 1_4:+1565772 None:intergenic
CATTGGAGGGAGAATTGATT+GGG 0.421579 1_4:+1565773 None:intergenic
GAAAATTACATACCGAAACT+TGG 0.426287 1_4:+1563235 None:intergenic
AGGGAGAATTGATTGGGATT+GGG 0.426520 1_4:+1565779 None:intergenic
TTAGGACAATAGATGTCATT+AGG 0.430511 1_4:-1558988 Msa0142610:three_prime_UTR
CAAACGGAGGAGAGATCTTC+GGG 0.431075 1_4:+1565744 None:intergenic
CTTGCAGTGCCAAACAGGCC+GGG 0.431911 1_4:-1564346 Msa0142610:intron
CTTCCAGATAGCATCTTTCT+GGG 0.432338 1_4:+1563624 None:intergenic
ACCGGTTCTTCTTCATGATC+CGG 0.435427 1_4:+1564623 None:intergenic
GCTCCCAGAAAGATGCTATC+TGG 0.435998 1_4:-1563627 Msa0142610:CDS
ATCTTCAACAACTGATAACT+TGG 0.440620 1_4:+1559996 None:intergenic
AAGGGAAACGGAGTTGTAGA+AGG 0.440946 1_4:-1565213 Msa0142610:CDS
GCTTGCAGTGCCAAACAGGC+CGG 0.446028 1_4:-1564347 Msa0142610:intron
CAATATGAAGGCGACTTAGA+AGG 0.446383 1_4:+1564491 None:intergenic
TTTAGAGCAGATGCAGAGTT+GGG 0.447298 1_4:-1559339 Msa0142610:CDS
CCGTTAATATTCTGGGTCTC+TGG 0.448445 1_4:+1564581 None:intergenic
TTTGGAAGAGGAGGGAGCTG+TGG 0.449145 1_4:+1565684 None:intergenic
CCAAACGGAGGAGAGATCTT+CGG 0.450370 1_4:+1565743 None:intergenic
TTGCAATGCCAAATATTATG+TGG 0.451793 1_4:-1564081 Msa0142610:CDS
AGATCTTCGGGAGGGTCCAT+TGG 0.455600 1_4:+1565756 None:intergenic
ACGCGCCGATGCAGCCGCGC+GGG 0.456926 1_4:+1565503 None:intergenic
GTCCGAGCTCGTTTCTTCCC+TGG 0.460470 1_4:+1565528 None:intergenic
GGGTTAGAGTTTGGAAGAGG+AGG 0.464452 1_4:+1565675 None:intergenic
GCCGGATCATGAAGAAGAAC+CGG 0.466001 1_4:-1564624 Msa0142610:CDS
GATGCTTTGTTAGAAGATAA+CGG 0.467392 1_4:-1565555 Msa0142610:CDS
AGGACGACCATGTTTATTTG+TGG 0.468432 1_4:-1558968 Msa0142610:three_prime_UTR
TCAGGGTTAGAGTTTGGAAG+AGG 0.468601 1_4:+1565672 None:intergenic
ATATATCCCTCTAGCTCTAC+AGG 0.469152 1_4:+1564136 None:intergenic
AGTTGGCAGTATCCATTAGA+AGG 0.469741 1_4:-1559101 Msa0142610:CDS
TGTGATGGAGAACTAGGAAT+AGG 0.470974 1_4:-1565088 Msa0142610:intron
GTTTAGAGCAGATGCAGAGT+TGG 0.473139 1_4:-1559340 Msa0142610:CDS
CAGACCGAAATTGTTTAGAA+AGG 0.476881 1_4:+1560406 None:intergenic
TTAGAAGATAACGGTTTACC+AGG 0.484755 1_4:-1565546 Msa0142610:CDS
GCTGTCACCGTTAATATTCT+GGG 0.485620 1_4:+1564574 None:intergenic
ATGCTAGAGATGCTATTTGT+CGG 0.486858 1_4:-1560089 Msa0142610:CDS
TGTTGGATGTTTGGCGGAGA+AGG 0.489529 1_4:+1565891 None:intergenic
TGTGTATCTATCTTTCATCA+TGG 0.489539 1_4:-1559135 Msa0142610:CDS
CCTGGGGCCTGCATTTATTG+AGG 0.489676 1_4:-1561340 Msa0142610:intron
TCATATTGAGGAAAATCTCC+TGG 0.489818 1_4:-1561358 Msa0142610:CDS
AATTGGAGCGGCATAATACT+AGG 0.491494 1_4:-1565189 Msa0142610:CDS
AGGCTATCATCGACGGCATA+GGG 0.494022 1_4:-1565439 Msa0142610:CDS
GTTGACGAACCATTAACAAC+CGG 0.496044 1_4:+1564605 None:intergenic
CGAAGTCGAGGAGGTAAGAT+AGG 0.500096 1_4:+1565718 None:intergenic
AAGGCTATCATCGACGGCAT+AGG 0.500460 1_4:-1565440 Msa0142610:CDS
ATCACTTGTTGTTTGTCTTG+TGG 0.502076 1_4:-1559160 Msa0142610:CDS
CTTTATTCCTGTACTTATTG+GGG 0.502295 1_4:-1560484 Msa0142610:CDS
CATCCCACATGCTTTGAAGC+AGG 0.502812 1_4:-1563302 Msa0142610:CDS
TTTGCAGATATTCCAATGGT+TGG 0.503021 1_4:-1564167 Msa0142610:intron
GAAAGTTGTTGGATGTTTGG+CGG 0.503320 1_4:+1565885 None:intergenic
TCTTTATCCCCAATAAGTAC+AGG 0.504320 1_4:+1560477 None:intergenic
CAGGCATACTTGCCAACCAT+TGG 0.506762 1_4:+1564155 None:intergenic
TATCTATCTTTCATCATGGG+AGG 0.507164 1_4:-1559131 Msa0142610:CDS
TTGTCTTCAGCCGAGTTATG+TGG 0.515481 1_4:+1561426 None:intergenic
TCATGGGAGGGTTAACGAGT+TGG 0.515866 1_4:-1559118 Msa0142610:CDS
TACACATGCCCTTCAGCAGT+TGG 0.521989 1_4:+1560112 None:intergenic
AGGTACGATACGGTGGTGGA+TGG 0.522499 1_4:+1565911 None:intergenic
TCCAATTGTGATGGAGAACT+AGG 0.524696 1_4:-1565094 Msa0142610:CDS
AGTTGTTGAAGATAACAGTC+AGG 0.525980 1_4:-1559986 Msa0142610:intron
AGCCTTCTTGGAAATTCCGC+AGG 0.535663 1_4:+1564297 None:intergenic
TCTTCGGGAGGGTCCATTGG+AGG 0.536545 1_4:+1565759 None:intergenic
CGGATTTCGATGAAGGGAAA+CGG 0.538156 1_4:-1565225 Msa0142610:CDS
CTAGAGGGATATATCCGCCC+TGG 0.540836 1_4:-1564127 Msa0142610:CDS
TAATACTAGGAGGAGGAGAA+AGG 0.540952 1_4:-1565176 Msa0142610:CDS
ATGATCTTCCGTGTAATGAA+AGG 0.541427 1_4:-1563573 Msa0142610:intron
AGATCACGCACATAATACAT+AGG 0.541842 1_4:+1563654 None:intergenic
GACGGCATAGGGTTTGTTTG+CGG 0.543698 1_4:-1565428 Msa0142610:CDS
GTGTATCTATCTTTCATCAT+GGG 0.544893 1_4:-1559134 Msa0142610:CDS
ATAACTACCTCAATAAATGC+AGG 0.551106 1_4:+1561333 None:intergenic
GTGACCGTCAAAATCTTACC+AGG 0.551898 1_4:-1559221 Msa0142610:CDS
CATATTGAGGAAAATCTCCT+GGG 0.554987 1_4:-1561357 Msa0142610:CDS
CTCTTATTGTCACAATATGA+AGG 0.557692 1_4:+1564479 None:intergenic
CCAATCAATTCTCCCTCCAA+TGG 0.558465 1_4:-1565772 Msa0142610:CDS
CCTCAATAAATGCAGGCCCC+AGG 0.559939 1_4:+1561340 None:intergenic
AAAAGTCGAGGCAAACATGC+AGG 0.562694 1_4:-1563345 Msa0142610:CDS
TGAAGGCGACTTAGAAGGAT+CGG 0.563449 1_4:+1564496 None:intergenic
CAATATAAGTGATGTTGACA+TGG 0.564749 1_4:-1560136 Msa0142610:CDS
GATATGTGTCCCTCATATTG+AGG 0.564934 1_4:-1561370 Msa0142610:CDS
AAAATTACATACCGAAACTT+GGG 0.567163 1_4:+1563236 None:intergenic
AGAAAGATGCTATCTGGAAG+AGG 0.569804 1_4:-1563621 Msa0142610:CDS
AGCTTAAAGGCTATCATCGA+CGG 0.570632 1_4:-1565446 Msa0142610:CDS
AATGATGATTCCAATTGTGA+TGG 0.570689 1_4:-1565103 Msa0142610:CDS
CTTCGGGAGGGTCCATTGGA+GGG 0.571070 1_4:+1565760 None:intergenic
AAGGCTGTAGATTCTGCAGT+AGG 0.571229 1_4:-1565157 Msa0142610:CDS
GGTACGATACGGTGGTGGAT+GGG 0.571935 1_4:+1565912 None:intergenic
GCTATTTGTCGGAAAGGTGG+AGG 0.572191 1_4:-1560078 Msa0142610:CDS
TTTCCTGCTTCAAAGCATGT+GGG 0.574026 1_4:+1563299 None:intergenic
TACTTGACCCGCGAGAAAGT+TGG 0.574402 1_4:+1565599 None:intergenic
AGAGATGCTATTTGTCGGAA+AGG 0.576533 1_4:-1560084 Msa0142610:CDS
ATCTATCTTTCATCATGGGA+GGG 0.580834 1_4:-1559130 Msa0142610:CDS
ACTTGCTCCAACTTTCTCGC+GGG 0.581441 1_4:-1565606 Msa0142610:CDS
GAATATCGTCGTCGAAGTCG+AGG 0.582065 1_4:+1565706 None:intergenic
TGTTTCAGCAGAAGCAACAA+AGG 0.585054 1_4:+1564544 None:intergenic
CGTTCCGTCTCCACATAACT+CGG 0.585530 1_4:-1561436 Msa0142610:CDS
TCGAGTTCGGGGCATGCACA+TGG 0.586136 1_4:+1565576 None:intergenic
AACGCGCCGATGCAGCCGCG+CGG 0.589818 1_4:+1565502 None:intergenic
AGTTGGAGCAAGTTAACCTC+GGG 0.590174 1_4:+1565616 None:intergenic
GAGGTAAGATAGGTCCCAAA+CGG 0.591191 1_4:+1565728 None:intergenic
ACTTGCTTGTAGATATAGCA+TGG 0.593375 1_4:-1560320 Msa0142610:CDS
AACTTGCTCCAACTTTCTCG+CGG 0.593749 1_4:-1565607 Msa0142610:CDS
GGTTAGAGTTTGGAAGAGGA+GGG 0.593911 1_4:+1565676 None:intergenic
CGGAATTTCCAAGAAGGCTG+CGG 0.598319 1_4:-1564293 Msa0142610:CDS
GATGCTATTTGTCGGAAAGG+TGG 0.601141 1_4:-1560081 Msa0142610:CDS
AAGTATGCCTGTAGAGCTAG+AGG 0.601194 1_4:-1564143 Msa0142610:CDS
CGTAAAGCTTAAAAGAAACC+CGG 0.601561 1_4:+1564328 None:intergenic
GATCACGCACATAATACATA+GGG 0.602014 1_4:+1563655 None:intergenic
TGACATGGACCAACTGCTGA+AGG 0.605178 1_4:-1560121 Msa0142610:CDS
GAGAAGGTACGATACGGTGG+TGG 0.609125 1_4:+1565907 None:intergenic
AGAGATACTGTCAACAGTGT+GGG 0.614903 1_4:-1565365 Msa0142610:CDS
TCGAGATCTCAAGAATCCCC+TGG 0.617392 1_4:+1559203 None:intergenic
CTTTGAAGCAGGAAAACCCA+TGG 0.618843 1_4:-1563291 Msa0142610:CDS
CGGAGGAGAGATCTTCGGGA+GGG 0.624318 1_4:+1565748 None:intergenic
TAGAGGGATATATCCGCCCT+GGG 0.627129 1_4:-1564126 Msa0142610:CDS
AGCGGCATAATACTAGGAGG+AGG 0.628758 1_4:-1565183 Msa0142610:CDS
ATCGTCAGGATCGTACACCC+AGG 0.629008 1_4:+1564109 None:intergenic
TACCAGGGAAGAAACGAGCT+CGG 0.630387 1_4:-1565530 Msa0142610:CDS
AGGCAAACATGCAGGCACCT+AGG 0.631524 1_4:-1563337 Msa0142610:CDS
CTGATCCAGACGAAAACGAT+AGG 0.631786 1_4:-1565653 Msa0142610:CDS
AAGTTGGAGCAAGTTAACCT+CGG 0.643009 1_4:+1565615 None:intergenic
GGATGAATATAGTGAAGCCT+AGG 0.643635 1_4:+1563320 None:intergenic
ATCCTGCGGAATTTCCAAGA+AGG 0.645595 1_4:-1564299 Msa0142610:CDS
ACGAGCTCGGACTGCCCGCG+CGG 0.648729 1_4:-1565517 Msa0142610:CDS
TCAGCCGAGTTATGTGGAGA+CGG 0.653109 1_4:+1561432 None:intergenic
GGTATAATTAGCATGCTGCA+AGG 0.653848 1_4:-1558878 Msa0142610:three_prime_UTR
TTGGCGGAGAAGGTACGATA+CGG 0.656274 1_4:+1565901 None:intergenic
TCGTCAGGATCGTACACCCA+GGG 0.658661 1_4:+1564110 None:intergenic
GCTTTACGACTGGAATCCTG+CGG 0.658919 1_4:-1564313 Msa0142610:CDS
ATCATTCAGATGAATTAGAG+CGG 0.660105 1_4:+1563596 None:intergenic
CTTGTGGAAGTAACTTGCTG+CGG 0.661577 1_4:-1563259 Msa0142610:CDS
CTAACAAAGCATCGAGTTCG+GGG 0.661782 1_4:+1565565 None:intergenic
GTAAGATAGGTCCCAAACGG+AGG 0.663374 1_4:+1565731 None:intergenic
GGATCCGAAAGCGTGACCCG+AGG 0.668770 1_4:-1565632 Msa0142610:CDS
GAAATATCAACTTCACAACC+AGG 0.671070 1_4:+1565471 None:intergenic
AATTTCTGTGACAAAAGTCG+AGG 0.673573 1_4:-1563357 Msa0142610:CDS
GAAACAAACCTTTCATTACA+CGG 0.677907 1_4:+1563565 None:intergenic
TATCGTCGTCGAAGTCGAGG+AGG 0.681010 1_4:+1565709 None:intergenic
AAGAGATACTGTCAACAGTG+TGG 0.681163 1_4:-1565366 Msa0142610:CDS
TTAAAATCCACAAATAAACA+TGG 0.681347 1_4:+1558961 None:intergenic
GACATGGACCAACTGCTGAA+GGG 0.681962 1_4:-1560120 Msa0142610:CDS
GCGGAGAAGGTACGATACGG+TGG 0.683203 1_4:+1565904 None:intergenic
GTTGTAGAAGGAAATTGGAG+CGG 0.686927 1_4:-1565201 Msa0142610:CDS
ACGGAGGAGAGATCTTCGGG+AGG 0.691526 1_4:+1565747 None:intergenic
TGACCGTCAAAATCTTACCA+GGG 0.692658 1_4:-1559220 Msa0142610:CDS
TAGAAGATAACGGTTTACCA+GGG 0.694372 1_4:-1565545 Msa0142610:CDS
GACCGTCAAAATCTTACCAG+GGG 0.695671 1_4:-1559219 Msa0142610:CDS
TGGAGCGGCATAATACTAGG+AGG 0.705490 1_4:-1565186 Msa0142610:CDS
AGTATGCCTGTAGAGCTAGA+GGG 0.705762 1_4:-1564142 Msa0142610:CDS
ATATTGAGGAAAATCTCCTG+GGG 0.711856 1_4:-1561356 Msa0142610:CDS
TCAGGATCGTACACCCAGGG+CGG 0.738843 1_4:+1564113 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAATTTAAGAGTAATTT+TGG - chr1_4:1562262-1562281 Msa0142610:intron 10.0%
!! TAATACGATATTTATTATAA+AGG - chr1_4:1562880-1562899 Msa0142610:intron 10.0%
!! AAATTTAATCAATTTAATCA+AGG + chr1_4:1564152-1564171 None:intergenic 10.0%
!!! TTTGTTTTTTCATTTTTCTA+CGG + chr1_4:1558830-1558849 None:intergenic 15.0%
!!! ATAAAATGCTTTAAAATACT+TGG + chr1_4:1560506-1560525 None:intergenic 15.0%
!!! ATTTGTATACTTCTTATTTT+TGG - chr1_4:1561235-1561254 Msa0142610:intron 15.0%
!! AAAAACAACTCAAATAATTT+AGG + chr1_4:1561272-1561291 None:intergenic 15.0%
!! CTATAACTAAAAATAACAAA+AGG + chr1_4:1561327-1561346 None:intergenic 15.0%
!!! CTTTTGTTATTTTTAGTTAT+AGG - chr1_4:1561325-1561344 Msa0142610:intron 15.0%
!!! TTTTGTTTTTATATTTAAGG+TGG + chr1_4:1561991-1562010 None:intergenic 15.0%
!! ACCTTAAATATAAAAACAAA+AGG - chr1_4:1561990-1562009 Msa0142610:intron 15.0%
!!! TCCTTTTGTTTTTATATTTA+AGG + chr1_4:1561994-1562013 None:intergenic 15.0%
!! AAATATAAAAACAAAAGGAA+TGG - chr1_4:1561995-1562014 Msa0142610:intron 15.0%
!! ATTAAGAAAATTGGTTAATT+TGG + chr1_4:1562327-1562346 None:intergenic 15.0%
!! TTTAAACAGATTAAGAAAAT+TGG + chr1_4:1562336-1562355 None:intergenic 15.0%
!! AATCTGTTTAAATTTATCAA+AGG - chr1_4:1562344-1562363 Msa0142610:intron 15.0%
!! ATCTGTTTAAATTTATCAAA+GGG - chr1_4:1562345-1562364 Msa0142610:intron 15.0%
!! AATACACTTCATAAATTAAT+TGG + chr1_4:1562413-1562432 None:intergenic 15.0%
!! ATAAAATATATAGTACCTAA+GGG + chr1_4:1562492-1562511 None:intergenic 15.0%
!! AATAAAATATATAGTACCTA+AGG + chr1_4:1562493-1562512 None:intergenic 15.0%
!!! TTAGGTACTATATATTTTAT+TGG - chr1_4:1562492-1562511 Msa0142610:intron 15.0%
!!! TAGGTACTATATATTTTATT+GGG - chr1_4:1562493-1562512 Msa0142610:intron 15.0%
!!! AAATATGATACTTTCTTTTT+TGG + chr1_4:1563199-1563218 None:intergenic 15.0%
!! CAAATTAAACTAAATACTTA+AGG + chr1_4:1563717-1563736 None:intergenic 15.0%
!!! CTTAAGTATTTAGTTTAATT+TGG - chr1_4:1563715-1563734 Msa0142610:intron 15.0%
!!! ATAAACTGTTTTTATCAAAA+TGG - chr1_4:1564177-1564196 Msa0142610:intron 15.0%
!! TTAATTAATGACATTATCAT+GGG + chr1_4:1564839-1564858 None:intergenic 15.0%
!! ATTAATTAATGACATTATCA+TGG + chr1_4:1564840-1564859 None:intergenic 15.0%
!! AAAGGATATTATAATGAATA+TGG - chr1_4:1565509-1565528 Msa0142610:CDS 15.0%
!! AATATTGAAAAATTTGTCAA+TGG + chr1_4:1565707-1565726 None:intergenic 15.0%
!!! TAATACATTTTGTTCATTTT+TGG - chr1_4:1565930-1565949 Msa0142610:five_prime_UTR 15.0%
!!! ATGTAGATTTCATGTTTTAT+CGG - chr1_4:1559526-1559545 Msa0142610:intron 20.0%
!!! ATTCTAATTTAATTTCCATG+TGG - chr1_4:1560054-1560073 Msa0142610:CDS 20.0%
!! ACATTTATCCACATAATATT+TGG + chr1_4:1560701-1560720 None:intergenic 20.0%
!! AAACTAAATACTTGAAAACA+GGG + chr1_4:1561004-1561023 None:intergenic 20.0%
!! AAAACTAAATACTTGAAAAC+AGG + chr1_4:1561005-1561024 None:intergenic 20.0%
!!! TAAGAAGTATACAAATGAAA+CGG + chr1_4:1561231-1561250 None:intergenic 20.0%
!!! AATTATTTGAGTTGTTTTTC+TGG - chr1_4:1561273-1561292 Msa0142610:intron 20.0%
!!! TATATTTCATTGATTACAGA+TGG - chr1_4:1561391-1561410 Msa0142610:CDS 20.0%
!!! TGAACATAGTTAATTTGTAT+CGG + chr1_4:1562208-1562227 None:intergenic 20.0%
!!! AGGTACTATATATTTTATTG+GGG - chr1_4:1562494-1562513 Msa0142610:intron 20.0%
!! CATATAAAACTTCAAGTAAA+AGG - chr1_4:1562658-1562677 Msa0142610:intron 20.0%
!!! CGTAGCTATATATTTTATTT+AGG - chr1_4:1562727-1562746 Msa0142610:intron 20.0%
!! CTATCATTATGATATGATAT+GGG + chr1_4:1562780-1562799 None:intergenic 20.0%
!! CCAAAAAAGATTATAACAAA+AGG + chr1_4:1562822-1562841 None:intergenic 20.0%
!!! CCTTTTGTTATAATCTTTTT+TGG - chr1_4:1562819-1562838 Msa0142610:intron 20.0%
!! AAAAGAAAACATACAAGTAT+TGG + chr1_4:1563560-1563579 None:intergenic 20.0%
!! CTAAAAAATCAAACAAATTG+AGG - chr1_4:1563653-1563672 Msa0142610:CDS 20.0%
!! GGATTTGTATTATAAAATTG+TGG - chr1_4:1563997-1564016 Msa0142610:intron 20.0%
!! TGTATTATAAAATTGTGGTT+TGG - chr1_4:1564002-1564021 Msa0142610:intron 20.0%
!! AAACAAAGAAAAATATGAAG+TGG + chr1_4:1564216-1564235 None:intergenic 20.0%
!!! AATGATTCAACTATCATTTT+GGG - chr1_4:1564567-1564586 Msa0142610:CDS 20.0%
!!! TTTGTTATGCTTATCAAATT+TGG + chr1_4:1564603-1564622 None:intergenic 20.0%
!! ACAAAAAAAATAACGAATTG+AGG + chr1_4:1565134-1565153 None:intergenic 20.0%
!!! TATCTTCTGATTTTTTTCAT+CGG + chr1_4:1565478-1565497 None:intergenic 20.0%
!!! ATAATATCCTTTTTCAAAAG+CGG + chr1_4:1565501-1565520 None:intergenic 20.0%
!!! ATTTTTGTACTTATTGTGTT+TGG - chr1_4:1565724-1565743 Msa0142610:CDS 20.0%
!! CTAAATAAATAGATGTCATT+AGG - chr1_4:1565765-1565784 Msa0142610:CDS 20.0%
!! TTAAAATCCACAAATAAACA+TGG + chr1_4:1565813-1565832 None:intergenic 20.0%
!!! TAATTATGAACCCAATTTTA+TGG - chr1_4:1565864-1565883 Msa0142610:five_prime_UTR 20.0%
!!! AATTATGAACCCAATTTTAT+GGG - chr1_4:1565865-1565884 Msa0142610:five_prime_UTR 20.0%
!!! TTTTTCATTTTTCTACGGTA+GGG + chr1_4:1558825-1558844 None:intergenic 25.0%
!!! TTTTTTCATTTTTCTACGGT+AGG + chr1_4:1558826-1558845 None:intergenic 25.0%
!!! GCTTTTTTCATAATCTCAAA+TGG - chr1_4:1558942-1558961 Msa0142610:three_prime_UTR 25.0%
!! TTTATGATGATGATGTTGAT+TGG - chr1_4:1559486-1559505 Msa0142610:intron 25.0%
!! TTATGATGATGATGTTGATT+GGG - chr1_4:1559487-1559506 Msa0142610:intron 25.0%
!! AGTATCACACTCTTATTTAT+TGG - chr1_4:1559729-1559748 Msa0142610:intron 25.0%
! ACAAGACAAATAAAGTCAAA+CGG + chr1_4:1559896-1559915 None:intergenic 25.0%
!!! TTCTTTCACGTGTTTATTTT+TGG - chr1_4:1560362-1560381 Msa0142610:CDS 25.0%
! AAGAATGCTTTCTTATTACA+CGG - chr1_4:1560788-1560807 Msa0142610:intron 25.0%
!! TAGTTTTTACTGAATCTGAT+TGG - chr1_4:1561018-1561037 Msa0142610:intron 25.0%
! AGAAAGAGGAAGAAAAAATA+TGG + chr1_4:1561045-1561064 None:intergenic 25.0%
! AAAATTACATACCGAAACTT+GGG + chr1_4:1561538-1561557 None:intergenic 25.0%
! CTTTAAATGATGTTTAGAAG+AGG + chr1_4:1561563-1561582 None:intergenic 25.0%
! CAAATAAATATGCTTATGTC+TGG + chr1_4:1561608-1561627 None:intergenic 25.0%
! ATAATATATTTGCCAGTGTT+GGG - chr1_4:1561638-1561657 Msa0142610:intron 25.0%
!! AAAATACACTTAGGTTGTAA+GGG - chr1_4:1561676-1561695 Msa0142610:intron 25.0%
! TGGAAAATCATAGTTAAACA+TGG + chr1_4:1561865-1561884 None:intergenic 25.0%
! TATAAAAACAAAAGGAATGG+AGG - chr1_4:1561998-1562017 Msa0142610:intron 25.0%
! ATAAAAACAAAAGGAATGGA+GGG - chr1_4:1561999-1562018 Msa0142610:intron 25.0%
!! AGTTAGAATTGTTTTCAGAA+GGG + chr1_4:1562092-1562111 None:intergenic 25.0%
!! AAGTTAGAATTGTTTTCAGA+AGG + chr1_4:1562093-1562112 None:intergenic 25.0%
!!! AAATTGGTTAATTTGGTTTG+CGG + chr1_4:1562320-1562339 None:intergenic 25.0%
! CATTACTTGAACTAAATACT+AGG - chr1_4:1562527-1562546 Msa0142610:intron 25.0%
! GCTATCATTATGATATGATA+TGG + chr1_4:1562781-1562800 None:intergenic 25.0%
! ATCATATCATAATGATAGCA+CGG - chr1_4:1562782-1562801 Msa0142610:intron 25.0%
!! ACTCTGATCTTAGTAAATTT+TGG - chr1_4:1562846-1562865 Msa0142610:intron 25.0%
!! CTCTGATCTTAGTAAATTTT+GGG - chr1_4:1562847-1562866 Msa0142610:intron 25.0%
!!! TTTTTTGAATAAGCCAAACT+AGG + chr1_4:1563006-1563025 None:intergenic 25.0%
!!! TATTCAGCTAGTTTAGATTT+TGG - chr1_4:1563218-1563237 Msa0142610:intron 25.0%
! GAATGAACTGTTAAATTATC+AGG + chr1_4:1563634-1563653 None:intergenic 25.0%
!!! ATTTTGCACTGATATCTTAT+TGG - chr1_4:1563878-1563897 Msa0142610:intron 25.0%
! CCAAAATCACATCAAATAAA+AGG + chr1_4:1564116-1564135 None:intergenic 25.0%
!!! CCTTTTATTTGATGTGATTT+TGG - chr1_4:1564113-1564132 Msa0142610:CDS 25.0%
!! TTTATTTGATGTGATTTTGG+AGG - chr1_4:1564116-1564135 Msa0142610:CDS 25.0%
! AACTTTATTCCTGTACTTAT+TGG - chr1_4:1564285-1564304 Msa0142610:intron 25.0%
! ACTTTATTCCTGTACTTATT+GGG - chr1_4:1564286-1564305 Msa0142610:intron 25.0%
!! TTCAGAAATTTTTGACAGAA+TGG - chr1_4:1564491-1564510 Msa0142610:CDS 25.0%
!!! TCAAAGATATTGCTATTTGT+TGG - chr1_4:1564530-1564549 Msa0142610:CDS 25.0%
!! CAATGATTCAACTATCATTT+TGG - chr1_4:1564566-1564585 Msa0142610:CDS 25.0%
!!! TATAGTTTTGAACTCCAAAA+TGG - chr1_4:1564716-1564735 Msa0142610:intron 25.0%
! AATCGAAAATAAAACCTAGT+GGG - chr1_4:1564924-1564943 Msa0142610:intron 25.0%
! ATGTCAACTATAGATATGTA+AGG - chr1_4:1564957-1564976 Msa0142610:intron 25.0%
! AAAAATAACGAATTGAGGAT+AGG + chr1_4:1565129-1565148 None:intergenic 25.0%
! AAAAATATATGTGGAAGGAA+TGG + chr1_4:1565170-1565189 None:intergenic 25.0%
! TCTTGAGCTAAAAATATATG+TGG + chr1_4:1565179-1565198 None:intergenic 25.0%
!! GGATTTTAAATTTAGATGTC+AGG - chr1_4:1565824-1565843 Msa0142610:exon 25.0%
TTAGAAAGTTGTTGGATGTT+TGG + chr1_4:1558892-1558911 None:intergenic 30.0%
TTGAGATTATGAAAAAAGCG+CGG + chr1_4:1558941-1558960 None:intergenic 30.0%
! GATGCTTTGTTAGAAGATAA+CGG - chr1_4:1559216-1559235 Msa0142610:CDS 30.0%
! GTTGATATTTCTGAGCTTAA+AGG - chr1_4:1559312-1559331 Msa0142610:CDS 30.0%
! TATGATGATGATGTTGATTG+GGG - chr1_4:1559488-1559507 Msa0142610:intron 30.0%
! TTTTATCGGATTTCGATGAA+GGG - chr1_4:1559540-1559559 Msa0142610:intron 30.0%
AATGATGATTCCAATTGTGA+TGG - chr1_4:1559668-1559687 Msa0142610:intron 30.0%
GCGTATAAAATGATGTTCAT+AGG - chr1_4:1559801-1559820 Msa0142610:intron 30.0%
AATAAACTGTTTGTGCAAAC+AGG - chr1_4:1559960-1559979 Msa0142610:intron 30.0%
ATAAACTGTTTGTGCAAACA+GGG - chr1_4:1559961-1559980 Msa0142610:intron 30.0%
! TTAATTTCCATGTGGCTTTA+TGG - chr1_4:1560062-1560081 Msa0142610:CDS 30.0%
CTCTTATTGTCACAATATGA+AGG + chr1_4:1560295-1560314 None:intergenic 30.0%
TAAGAGTGATTATTCGTCTA+TGG - chr1_4:1560309-1560328 Msa0142610:CDS 30.0%
! TTTCTTTTAAGCTTTACGAC+TGG - chr1_4:1560448-1560467 Msa0142610:CDS 30.0%
ACAGTTTAGTATTTCGATTG+TGG - chr1_4:1560527-1560546 Msa0142610:intron 30.0%
!! TGTTTTTGCAGATATTCCAA+TGG - chr1_4:1560600-1560619 Msa0142610:intron 30.0%
TTGCAATGCCAAATATTATG+TGG - chr1_4:1560690-1560709 Msa0142610:intron 30.0%
! AAGCATTCTTTTTACCTAAC+AGG + chr1_4:1560778-1560797 None:intergenic 30.0%
AGAATGCTTTCTTATTACAC+GGG - chr1_4:1560789-1560808 Msa0142610:intron 30.0%
GAACCATAAAGTCTAATACA+GGG + chr1_4:1560822-1560841 None:intergenic 30.0%
AGAACCATAAAGTCTAATAC+AGG + chr1_4:1560823-1560842 None:intergenic 30.0%
TGAAGTCAAAAATCAGAAAG+AGG + chr1_4:1561059-1561078 None:intergenic 30.0%
ATCATTCAGATGAATTAGAG+CGG + chr1_4:1561178-1561197 None:intergenic 30.0%
GAAACAAACCTTTCATTACA+CGG + chr1_4:1561209-1561228 None:intergenic 30.0%
GAAAATTACATACCGAAACT+TGG + chr1_4:1561539-1561558 None:intergenic 30.0%
CATAATATATTTGCCAGTGT+TGG - chr1_4:1561637-1561656 Msa0142610:intron 30.0%
TAATATATTTGCCAGTGTTG+GGG - chr1_4:1561639-1561658 Msa0142610:intron 30.0%
! AGTGTATTTTCCCTTACATT+AGG + chr1_4:1561666-1561685 None:intergenic 30.0%
ATGTAAGGGAAAATACACTT+AGG - chr1_4:1561667-1561686 Msa0142610:intron 30.0%
! GAAAATACACTTAGGTTGTA+AGG - chr1_4:1561675-1561694 Msa0142610:intron 30.0%
TGTTCGTATTATTCCTGAAA+TGG - chr1_4:1561785-1561804 Msa0142610:intron 30.0%
CACTGTAATATTTCCATTTC+AGG + chr1_4:1561801-1561820 None:intergenic 30.0%
CTGAAATGGAAATATTACAG+TGG - chr1_4:1561799-1561818 Msa0142610:intron 30.0%
AGAGAGAAATGAACTAACTA+CGG + chr1_4:1562147-1562166 None:intergenic 30.0%
!! ACATAGTTAATTTGTATCGG+TGG + chr1_4:1562205-1562224 None:intergenic 30.0%
! ATCAAAGGGTCTTATATACA+AGG - chr1_4:1562359-1562378 Msa0142610:intron 30.0%
ACTTATTGACATGTTACCTT+AGG + chr1_4:1562466-1562485 None:intergenic 30.0%
ATGTCAATAAGTATACCCTT+AGG - chr1_4:1562474-1562493 Msa0142610:intron 30.0%
! TTATAAAGGCATAAACCACT+TGG - chr1_4:1562894-1562913 Msa0142610:intron 30.0%
! TATAAAGGCATAAACCACTT+GGG - chr1_4:1562895-1562914 Msa0142610:intron 30.0%
!!! CTTTCTTTTTTGGTGTACAA+CGG + chr1_4:1563189-1563208 None:intergenic 30.0%
! AGGCTTCTTGTATCTTTTTA+TGG - chr1_4:1563288-1563307 Msa0142610:CDS 30.0%
ATAACTACCTCAATAAATGC+AGG + chr1_4:1563441-1563460 None:intergenic 30.0%
AAACAGGAAATTAGAAATGG+AGG + chr1_4:1563495-1563514 None:intergenic 30.0%
AGCAAACAGGAAATTAGAAA+TGG + chr1_4:1563498-1563517 None:intergenic 30.0%
TGATATGAAACATAGCAAAC+AGG + chr1_4:1563511-1563530 None:intergenic 30.0%
TGTTAAATTATCAGGTCATG+CGG + chr1_4:1563626-1563645 None:intergenic 30.0%
AGGAACACTGAAACTTTAAT+GGG - chr1_4:1563673-1563692 Msa0142610:intron 30.0%
TACGAGGATATGCTAAAATT+TGG + chr1_4:1563838-1563857 None:intergenic 30.0%
AACCTGTTATCTTAAGCAAA+TGG - chr1_4:1563913-1563932 Msa0142610:intron 30.0%
ACCTGTTATCTTAAGCAAAT+GGG - chr1_4:1563914-1563933 Msa0142610:intron 30.0%
AAGCAAATGGGATTTATCTA+AGG - chr1_4:1563926-1563945 Msa0142610:intron 30.0%
ATCATGGAAACTTTCGAATT+TGG - chr1_4:1563975-1563994 Msa0142610:intron 30.0%
TCATGGAAACTTTCGAATTT+GGG - chr1_4:1563976-1563995 Msa0142610:intron 30.0%
TCACATCAAATAAAAGGTTC+AGG + chr1_4:1564110-1564129 None:intergenic 30.0%
CTTTATTCCTGTACTTATTG+GGG - chr1_4:1564287-1564306 Msa0142610:CDS 30.0%
CTCTCCTTTCTAAACAATTT+CGG - chr1_4:1564361-1564380 Msa0142610:intron 30.0%
!! TGTCAAAAATTTCTGAAGTC+GGG + chr1_4:1564488-1564507 None:intergenic 30.0%
!! CTGTCAAAAATTTCTGAAGT+CGG + chr1_4:1564489-1564508 None:intergenic 30.0%
CATGTCAACATCACTTATAT+TGG + chr1_4:1564637-1564656 None:intergenic 30.0%
CAATATAAGTGATGTTGACA+TGG - chr1_4:1564635-1564654 Msa0142610:CDS 30.0%
ATCTTCAACAACTGATAACT+TGG + chr1_4:1564778-1564797 None:intergenic 30.0%
CAATCGAAAATAAAACCTAG+TGG - chr1_4:1564923-1564942 Msa0142610:intron 30.0%
CTATAGTTGACATAAATGCA+CGG + chr1_4:1564950-1564969 None:intergenic 30.0%
GAGCTAAAAATATATGTGGA+AGG + chr1_4:1565175-1565194 None:intergenic 30.0%
! ACTATTGACTAAGTTTCTCT+CGG - chr1_4:1565210-1565229 Msa0142610:CDS 30.0%
TCATTTAGTAAACTCTGCTT+TGG - chr1_4:1565275-1565294 Msa0142610:intron 30.0%
!!! TACATTGATTTTTGCTTTGC+AGG - chr1_4:1565401-1565420 Msa0142610:CDS 30.0%
!!! ACATTGATTTTTGCTTTGCA+GGG - chr1_4:1565402-1565421 Msa0142610:CDS 30.0%
GATACAAGCACAAAAATAGT+TGG + chr1_4:1565594-1565613 None:intergenic 30.0%
TGTGTATCTATCTTTCATCA+TGG - chr1_4:1565636-1565655 Msa0142610:CDS 30.0%
GTGTATCTATCTTTCATCAT+GGG - chr1_4:1565637-1565656 Msa0142610:CDS 30.0%
TTAGGACAATAGATGTCATT+AGG - chr1_4:1565783-1565802 Msa0142610:CDS 30.0%
GATGTCAGGTAAAAATCAAA+AGG - chr1_4:1565838-1565857 Msa0142610:five_prime_UTR 30.0%
TACCTTCAACCCATAAAATT+GGG + chr1_4:1565877-1565896 None:intergenic 30.0%
ATACCTTCAACCCATAAAAT+TGG + chr1_4:1565878-1565897 None:intergenic 30.0%
AATTGATTGGGATTGGGATT+GGG + chr1_4:1558989-1559008 None:intergenic 35.0%
!! TTCTAACAAAGCATCGAGTT+CGG + chr1_4:1559211-1559230 None:intergenic 35.0%
! TTAGAAGATAACGGTTTACC+AGG - chr1_4:1559225-1559244 Msa0142610:CDS 35.0%
! TAGAAGATAACGGTTTACCA+GGG - chr1_4:1559226-1559245 Msa0142610:CDS 35.0%
GAAATATCAACTTCACAACC+AGG + chr1_4:1559303-1559322 None:intergenic 35.0%
! GTTTTATCGGATTTCGATGA+AGG - chr1_4:1559539-1559558 Msa0142610:intron 35.0%
! TGTTTTCAGCTTATTTCCGT+CGG - chr1_4:1559825-1559844 Msa0142610:intron 35.0%
!! TATCGAAAAAAGAGTGTTGC+CGG - chr1_4:1560129-1560148 Msa0142610:CDS 35.0%
AGTGATTATTCGTCTATGGT+AGG - chr1_4:1560313-1560332 Msa0142610:CDS 35.0%
!!! ATTTTTGGTGCGAGAAATTG+TGG - chr1_4:1560377-1560396 Msa0142610:CDS 35.0%
CGTAAAGCTTAAAAGAAACC+CGG + chr1_4:1560446-1560465 None:intergenic 35.0%
ATCAGTCACTAACATGTAGA+TGG + chr1_4:1560565-1560584 None:intergenic 35.0%
TTTGCAGATATTCCAATGGT+TGG - chr1_4:1560604-1560623 Msa0142610:intron 35.0%
GCATTGCAATAAAAATCGTC+AGG + chr1_4:1560679-1560698 None:intergenic 35.0%
! CTTTGTTATGCTCATTCTCA+TGG - chr1_4:1560841-1560860 Msa0142610:intron 35.0%
ACTTCATCTTGTCTCTCTTA+TGG - chr1_4:1561073-1561092 Msa0142610:intron 35.0%
GATCACGCACATAATACATA+GGG + chr1_4:1561119-1561138 None:intergenic 35.0%
AGATCACGCACATAATACAT+AGG + chr1_4:1561120-1561139 None:intergenic 35.0%
ATGATCTTCCGTGTAATGAA+AGG - chr1_4:1561198-1561217 Msa0142610:intron 35.0%
!!! AGCATTTTAGAACCTGATTC+AGG - chr1_4:1561299-1561318 Msa0142610:intron 35.0%
TAACAAAAGGAACCTGAATC+AGG + chr1_4:1561314-1561333 None:intergenic 35.0%
! TTATAGGCTTCAAGTTCTGA+GGG - chr1_4:1561341-1561360 Msa0142610:CDS 35.0%
AATTTCTGTGACAAAAGTCG+AGG - chr1_4:1561414-1561433 Msa0142610:CDS 35.0%
CTCTATTAATTGCCTTTGTG+TGG + chr1_4:1561743-1561762 None:intergenic 35.0%
!! GTAGTAAGAGAAAGGTATCT+TGG + chr1_4:1561885-1561904 None:intergenic 35.0%
TAGAGGGCTTCTAATATATG+GGG + chr1_4:1561914-1561933 None:intergenic 35.0%
GTAGAGGGCTTCTAATATAT+GGG + chr1_4:1561915-1561934 None:intergenic 35.0%
TTCAGAAGGGTCTCATATTT+AGG + chr1_4:1562079-1562098 None:intergenic 35.0%
TGAACTAACTACGGGTATTA+TGG + chr1_4:1562138-1562157 None:intergenic 35.0%
GAGAGAAATGAACTAACTAC+GGG + chr1_4:1562146-1562165 None:intergenic 35.0%
TTAACTCCAGATAGGACAAT+TGG + chr1_4:1562573-1562592 None:intergenic 35.0%
! TAGGAATTGACCTTCCTTTT+AGG - chr1_4:1562746-1562765 Msa0142610:intron 35.0%
TATGGGAATGCAAACCTAAA+AGG + chr1_4:1562763-1562782 None:intergenic 35.0%
ATAATGATAGCACGGTTTAG+TGG - chr1_4:1562790-1562809 Msa0142610:intron 35.0%
TAATGATAGCACGGTTTAGT+GGG - chr1_4:1562791-1562810 Msa0142610:intron 35.0%
TTTGTTGAAGCCACTAGAAT+TGG - chr1_4:1563108-1563127 Msa0142610:intron 35.0%
CTGTAATGAGGTGATAATCA+TGG - chr1_4:1563264-1563283 Msa0142610:CDS 35.0%
! GGAGATTTTCCTCAATATGA+GGG + chr1_4:1563413-1563432 None:intergenic 35.0%
! AGGAGATTTTCCTCAATATG+AGG + chr1_4:1563414-1563433 None:intergenic 35.0%
TCATATTGAGGAAAATCTCC+TGG - chr1_4:1563413-1563432 Msa0142610:intron 35.0%
CATATTGAGGAAAATCTCCT+GGG - chr1_4:1563414-1563433 Msa0142610:intron 35.0%
ATATTGAGGAAAATCTCCTG+GGG - chr1_4:1563415-1563434 Msa0142610:intron 35.0%
GAGGAACACTGAAACTTTAA+TGG - chr1_4:1563672-1563691 Msa0142610:intron 35.0%
!!! TTTGGATGTGTCATTTTCGT+TGG - chr1_4:1563733-1563752 Msa0142610:intron 35.0%
ATCAGTGCAAAATTCGATAC+CGG + chr1_4:1563871-1563890 None:intergenic 35.0%
TCCCATTTGCTTAAGATAAC+AGG + chr1_4:1563918-1563937 None:intergenic 35.0%
ACTAAGAGCTGTAGTTATCA+TGG - chr1_4:1563959-1563978 Msa0142610:intron 35.0%
CATACTTCTTTCCTTTCTGT+AGG - chr1_4:1564239-1564258 Msa0142610:intron 35.0%
TCTTTATCCCCAATAAGTAC+AGG + chr1_4:1564297-1564316 None:intergenic 35.0%
CAGACCGAAATTGTTTAGAA+AGG + chr1_4:1564368-1564387 None:intergenic 35.0%
ACTTGCTTGTAGATATAGCA+TGG - chr1_4:1564451-1564470 Msa0142610:intron 35.0%
! ATGCTAGAGATGCTATTTGT+CGG - chr1_4:1564682-1564701 Msa0142610:intron 35.0%
!! GTTTTGAACTCCAAAATGGA+AGG - chr1_4:1564720-1564739 Msa0142610:intron 35.0%
! AACTGATAACTTGGCGTTTT+GGG + chr1_4:1564769-1564788 None:intergenic 35.0%
AGTTGTTGAAGATAACAGTC+AGG - chr1_4:1564785-1564804 Msa0142610:intron 35.0%
GGCAATGTGAATGAAATTGT+TGG - chr1_4:1565007-1565026 Msa0142610:intron 35.0%
AGGAAGTAGTGTAACAAGTT+TGG + chr1_4:1565109-1565128 None:intergenic 35.0%
CTAAGTTTCTCTCGGAAAAA+TGG - chr1_4:1565218-1565237 Msa0142610:CDS 35.0%
TGGAATTTCCATGGAAAAGA+TGG - chr1_4:1565319-1565338 Msa0142610:intron 35.0%
GTCAATCCAACTAGGATTTA+CGG + chr1_4:1565366-1565385 None:intergenic 35.0%
AGAAACATGTCAATCCAACT+AGG + chr1_4:1565374-1565393 None:intergenic 35.0%
!! GAAGATACCGCTTTTGAAAA+AGG - chr1_4:1565491-1565510 Msa0142610:CDS 35.0%
! TTTTGACGGTCACATCTTTT+AGG + chr1_4:1565543-1565562 None:intergenic 35.0%
!! ATCACTTGTTGTTTGTCTTG+TGG - chr1_4:1565611-1565630 Msa0142610:CDS 35.0%
TATCTATCTTTCATCATGGG+AGG - chr1_4:1565640-1565659 Msa0142610:CDS 35.0%
ATCTATCTTTCATCATGGGA+GGG - chr1_4:1565641-1565660 Msa0142610:CDS 35.0%
GTTGAACAAACACCTTCTAA+TGG + chr1_4:1565685-1565704 None:intergenic 35.0%
!! AACCCAATTTTATGGGTTGA+AGG - chr1_4:1565872-1565891 Msa0142610:five_prime_UTR 35.0%
GAAAGTTGTTGGATGTTTGG+CGG + chr1_4:1558889-1558908 None:intergenic 40.0%
!! TTGGAATAAGCGCTTTTTGG+TGG + chr1_4:1558918-1558937 None:intergenic 40.0%
! GATTATGAAAAAAGCGCGGT+TGG + chr1_4:1558937-1558956 None:intergenic 40.0%
GAATTGATTGGGATTGGGAT+TGG + chr1_4:1558990-1559009 None:intergenic 40.0%
AGGGAGAATTGATTGGGATT+GGG + chr1_4:1558995-1559014 None:intergenic 40.0%
CATTGGAGGGAGAATTGATT+GGG + chr1_4:1559001-1559020 None:intergenic 40.0%
! TATCGTTTTCGTCTGGATCA+GGG + chr1_4:1559119-1559138 None:intergenic 40.0%
AAGTTGGAGCAAGTTAACCT+CGG + chr1_4:1559159-1559178 None:intergenic 40.0%
!! TCTAACAAAGCATCGAGTTC+GGG + chr1_4:1559210-1559229 None:intergenic 40.0%
AGCTTAAAGGCTATCATCGA+CGG - chr1_4:1559325-1559344 Msa0142610:CDS 40.0%
GCTACTACTGTTGTTCTTGA+TGG - chr1_4:1559375-1559394 Msa0142610:intron 40.0%
AAGAGATACTGTCAACAGTG+TGG - chr1_4:1559405-1559424 Msa0142610:intron 40.0%
AGAGATACTGTCAACAGTGT+GGG - chr1_4:1559406-1559425 Msa0142610:intron 40.0%
ACGGAGTTGTAGAAGGAAAT+TGG - chr1_4:1559565-1559584 Msa0142610:intron 40.0%
GTTGTAGAAGGAAATTGGAG+CGG - chr1_4:1559570-1559589 Msa0142610:intron 40.0%
AATTGGAGCGGCATAATACT+AGG - chr1_4:1559582-1559601 Msa0142610:intron 40.0%
TAATACTAGGAGGAGGAGAA+AGG - chr1_4:1559595-1559614 Msa0142610:intron 40.0%
! TCCAATTGTGATGGAGAACT+AGG - chr1_4:1559677-1559696 Msa0142610:intron 40.0%
! TCCTAGTTCTCCATCACAAT+TGG + chr1_4:1559681-1559700 None:intergenic 40.0%
! TGTGATGGAGAACTAGGAAT+AGG - chr1_4:1559683-1559702 Msa0142610:intron 40.0%
ATGGAGAACTAGGAATAGGT+TGG - chr1_4:1559687-1559706 Msa0142610:intron 40.0%
TTGTCAGTTGACAGAGTGAT+AGG + chr1_4:1559987-1560006 None:intergenic 40.0%
TCTGTCAACTGACAAGTCAA+TGG - chr1_4:1559992-1560011 Msa0142610:CDS 40.0%
TACACATCCATAAAGCCACA+TGG + chr1_4:1560072-1560091 None:intergenic 40.0%
!! TGTGGCTTTATGGATGTGTA+TGG - chr1_4:1560072-1560091 Msa0142610:CDS 40.0%
!! GTGGCTTTATGGATGTGTAT+GGG - chr1_4:1560073-1560092 Msa0142610:CDS 40.0%
GAAGAAGAACCGGTTGTTAA+TGG - chr1_4:1560157-1560176 Msa0142610:CDS 40.0%
GTTGACGAACCATTAACAAC+CGG + chr1_4:1560169-1560188 None:intergenic 40.0%
CCAGAGACCCAGAATATTAA+CGG - chr1_4:1560190-1560209 Msa0142610:CDS 40.0%
GCTGTCACCGTTAATATTCT+GGG + chr1_4:1560200-1560219 None:intergenic 40.0%
TGTTTCAGCAGAAGCAACAA+AGG + chr1_4:1560230-1560249 None:intergenic 40.0%
GCTGAAACACAAGCGAATAT+TGG - chr1_4:1560241-1560260 Msa0142610:CDS 40.0%
CAATATGAAGGCGACTTAGA+AGG + chr1_4:1560283-1560302 None:intergenic 40.0%
!! ATATATCCCTCTAGCTCTAC+AGG + chr1_4:1560638-1560657 None:intergenic 40.0%
CCTAACAGGCACTTAAGATA+TGG + chr1_4:1560764-1560783 None:intergenic 40.0%
CCATATCTTAAGTGCCTGTT+AGG - chr1_4:1560761-1560780 Msa0142610:intron 40.0%
GTGCCCTGTATTAGACTTTA+TGG - chr1_4:1560816-1560835 Msa0142610:intron 40.0%
CCTGATTCATTACAGAGAGA+GGG + chr1_4:1560947-1560966 None:intergenic 40.0%
TCCTGATTCATTACAGAGAG+AGG + chr1_4:1560948-1560967 None:intergenic 40.0%
ACATAGGGTCTTTGAGTAAC+TGG + chr1_4:1561104-1561123 None:intergenic 40.0%
CTTCCAGATAGCATCTTTCT+GGG + chr1_4:1561150-1561169 None:intergenic 40.0%
TCTTCCAGATAGCATCTTTC+TGG + chr1_4:1561151-1561170 None:intergenic 40.0%
AGAAAGATGCTATCTGGAAG+AGG - chr1_4:1561150-1561169 Msa0142610:intron 40.0%
! GTTATAGGCTTCAAGTTCTG+AGG - chr1_4:1561340-1561359 Msa0142610:intron 40.0%
GGATGAATATAGTGAAGCCT+AGG + chr1_4:1561454-1561473 None:intergenic 40.0%
TTTCCTGCTTCAAAGCATGT+GGG + chr1_4:1561475-1561494 None:intergenic 40.0%
! TTTTCCTGCTTCAAAGCATG+TGG + chr1_4:1561476-1561495 None:intergenic 40.0%
CCACAAGCGAAAAATTCCAT+GGG + chr1_4:1561499-1561518 None:intergenic 40.0%
TCCACAAGCGAAAAATTCCA+TGG + chr1_4:1561500-1561519 None:intergenic 40.0%
TTGTAAGGGAAAACACATGC+AGG - chr1_4:1561690-1561709 Msa0142610:intron 40.0%
TAGAAACCAGAACCACACAA+AGG - chr1_4:1561728-1561747 Msa0142610:intron 40.0%
TAATTGCCTTTGTGTGGTTC+TGG + chr1_4:1561737-1561756 None:intergenic 40.0%
GGGATTGAGTAGTAAGAGAA+AGG + chr1_4:1561893-1561912 None:intergenic 40.0%
AGAGGGCTTCTAATATATGG+GGG + chr1_4:1561913-1561932 None:intergenic 40.0%
CGTAGAGGGCTTCTAATATA+TGG + chr1_4:1561916-1561935 None:intergenic 40.0%
CGTACAAAATTGAGTAGCAG+TGG + chr1_4:1561958-1561977 None:intergenic 40.0%
GTTCATTTCTCTCTCATGTG+AGG - chr1_4:1562153-1562172 Msa0142610:intron 40.0%
CGTATCATTAAGTGTGCCTA+AGG - chr1_4:1562447-1562466 Msa0142610:intron 40.0%
ACATCTCCAATTGTCCTATC+TGG - chr1_4:1562564-1562583 Msa0142610:intron 40.0%
TTCTCTGCTTAACTCCAGAT+AGG + chr1_4:1562581-1562600 None:intergenic 40.0%
GGAATGCAAACCTAAAAGGA+AGG + chr1_4:1562759-1562778 None:intergenic 40.0%
CAAACTAGGCCACTGAAATT+GGG + chr1_4:1562992-1563011 None:intergenic 40.0%
! TAGAATTGGTCTAGTGGTGA+GGG - chr1_4:1563122-1563141 Msa0142610:intron 40.0%
!! TTTTTGGTGTACAACGGTGT+CGG + chr1_4:1563183-1563202 None:intergenic 40.0%
ATGTACGTCTGACTGTAATG+AGG - chr1_4:1563252-1563271 Msa0142610:CDS 40.0%
AATGAGGTGATAATCATGGC+AGG - chr1_4:1563268-1563287 Msa0142610:CDS 40.0%
GATATGTGTCCCTCATATTG+AGG - chr1_4:1563401-1563420 Msa0142610:intron 40.0%
TGGAGGTCAATGCATACTTA+AGG + chr1_4:1563478-1563497 None:intergenic 40.0%
TCAGTGCAAAATTCGATACC+GGG + chr1_4:1563870-1563889 None:intergenic 40.0%
CTCATTCTCAACCTACAGAA+AGG + chr1_4:1564253-1564272 None:intergenic 40.0%
AAACAATTTCGGTCTGCATC+TGG - chr1_4:1564372-1564391 Msa0142610:intron 40.0%
! AGAGATGCTATTTGTCGGAA+AGG - chr1_4:1564687-1564706 Msa0142610:intron 40.0%
!! AGGTTTGAAGCCTTCCATTT+TGG + chr1_4:1564733-1564752 None:intergenic 40.0%
! CAACTGATAACTTGGCGTTT+TGG + chr1_4:1564770-1564789 None:intergenic 40.0%
! GATACTCTGCGTTTTACTTC+AGG - chr1_4:1564881-1564900 Msa0142610:intron 40.0%
AGCATGTGTTGGAATTTCCA+TGG - chr1_4:1565310-1565329 Msa0142610:intron 40.0%
! ACTTTGCTCCATCTTTTCCA+TGG + chr1_4:1565330-1565349 None:intergenic 40.0%
CTGATTCCGTAAATCCTAGT+TGG - chr1_4:1565357-1565376 Msa0142610:intron 40.0%
! TTTAGAGCAGATGCAGAGTT+GGG - chr1_4:1565432-1565451 Msa0142610:CDS 40.0%
TGACCGTCAAAATCTTACCA+GGG - chr1_4:1565551-1565570 Msa0142610:CDS 40.0%
! ATCCCCTGGTAAGATTTTGA+CGG + chr1_4:1565557-1565576 None:intergenic 40.0%
AGTTGGCAGTATCCATTAGA+AGG - chr1_4:1565670-1565689 Msa0142610:CDS 40.0%
AGGACGACCATGTTTATTTG+TGG - chr1_4:1565803-1565822 Msa0142610:CDS 40.0%
GGTATAATTAGCATGCTGCA+AGG - chr1_4:1565893-1565912 Msa0142610:five_prime_UTR 40.0%
! GGTGGTGGTTAGAAAGTTGT+TGG + chr1_4:1558900-1558919 None:intergenic 45.0%
!! GAATAAGCGCTTTTTGGTGG+TGG + chr1_4:1558915-1558934 None:intergenic 45.0%
! CGGTTGGAATAAGCGCTTTT+TGG + chr1_4:1558921-1558940 None:intergenic 45.0%
TTGGGATTGGGATTGAGGTT+TGG + chr1_4:1558971-1558990 None:intergenic 45.0%
TTGGGATTGGGATTGGGATT+GGG + chr1_4:1558977-1558996 None:intergenic 45.0%
ATTGGGATTGGGATTGGGAT+TGG + chr1_4:1558978-1558997 None:intergenic 45.0%
GAGGGAGAATTGATTGGGAT+TGG + chr1_4:1558996-1559015 None:intergenic 45.0%
CCATTGGAGGGAGAATTGAT+TGG + chr1_4:1559002-1559021 None:intergenic 45.0%
CCAATCAATTCTCCCTCCAA+TGG - chr1_4:1558999-1559018 Msa0142610:three_prime_UTR 45.0%
GAGGTAAGATAGGTCCCAAA+CGG + chr1_4:1559046-1559065 None:intergenic 45.0%
GGTTAGAGTTTGGAAGAGGA+GGG + chr1_4:1559098-1559117 None:intergenic 45.0%
TCAGGGTTAGAGTTTGGAAG+AGG + chr1_4:1559102-1559121 None:intergenic 45.0%
TCTGGATCAGGGTTAGAGTT+TGG + chr1_4:1559108-1559127 None:intergenic 45.0%
! CTATCGTTTTCGTCTGGATC+AGG + chr1_4:1559120-1559139 None:intergenic 45.0%
CTGATCCAGACGAAAACGAT+AGG - chr1_4:1559118-1559137 Msa0142610:CDS 45.0%
AGTTGGAGCAAGTTAACCTC+GGG + chr1_4:1559158-1559177 None:intergenic 45.0%
! AACTTGCTCCAACTTTCTCG+CGG - chr1_4:1559164-1559183 Msa0142610:CDS 45.0%
!! CTAACAAAGCATCGAGTTCG+GGG + chr1_4:1559209-1559228 None:intergenic 45.0%
CGGATTTCGATGAAGGGAAA+CGG - chr1_4:1559546-1559565 Msa0142610:intron 45.0%
AAGGGAAACGGAGTTGTAGA+AGG - chr1_4:1559558-1559577 Msa0142610:intron 45.0%
AAGGCTGTAGATTCTGCAGT+AGG - chr1_4:1559614-1559633 Msa0142610:intron 45.0%
! ACCGGTTCTTCTTCATGATC+CGG + chr1_4:1560151-1560170 None:intergenic 45.0%
CCGTTAATATTCTGGGTCTC+TGG + chr1_4:1560193-1560212 None:intergenic 45.0%
CGCTGTCACCGTTAATATTC+TGG + chr1_4:1560201-1560220 None:intergenic 45.0%
TGAAGGCGACTTAGAAGGAT+CGG + chr1_4:1560278-1560297 None:intergenic 45.0%
TTGGTGCGAGAAATTGTGGT+TGG - chr1_4:1560381-1560400 Msa0142610:CDS 45.0%
! TTTTGCTTGCAGTGCCAAAC+AGG - chr1_4:1560420-1560439 Msa0142610:CDS 45.0%
TAAAAGAAACCCGGCCTGTT+TGG + chr1_4:1560437-1560456 None:intergenic 45.0%
ATCCTGCGGAATTTCCAAGA+AGG - chr1_4:1560472-1560491 Msa0142610:CDS 45.0%
AAGTATGCCTGTAGAGCTAG+AGG - chr1_4:1560628-1560647 Msa0142610:intron 45.0%
AGTATGCCTGTAGAGCTAGA+GGG - chr1_4:1560629-1560648 Msa0142610:intron 45.0%
TTCATTACAGAGAGAGGGAG+TGG + chr1_4:1560942-1560961 None:intergenic 45.0%
CCCTCTCTCTGTAATGAATC+AGG - chr1_4:1560944-1560963 Msa0142610:intron 45.0%
AAAAGTCGAGGCAAACATGC+AGG - chr1_4:1561426-1561445 Msa0142610:CDS 45.0%
!! CTTTGAAGCAGGAAAACCCA+TGG - chr1_4:1561480-1561499 Msa0142610:CDS 45.0%
! CCCATGGAATTTTTCGCTTG+TGG - chr1_4:1561496-1561515 Msa0142610:intron 45.0%
!! CTTGTGGAAGTAACTTGCTG+CGG - chr1_4:1561512-1561531 Msa0142610:intron 45.0%
TTACATTAGGTCCCCAACAC+TGG + chr1_4:1561653-1561672 None:intergenic 45.0%
! AGTGTTGGGGACCTAATGTA+AGG - chr1_4:1561652-1561671 Msa0142610:intron 45.0%
GTGTTGGGGACCTAATGTAA+GGG - chr1_4:1561653-1561672 Msa0142610:intron 45.0%
GAAAACACATGCAGGTCACA+AGG - chr1_4:1561698-1561717 Msa0142610:intron 45.0%
AAGGCATAAACCACTTGGGT+TGG - chr1_4:1562899-1562918 Msa0142610:intron 45.0%
AATCTAACCCGAGACCTTGA+AGG + chr1_4:1562960-1562979 None:intergenic 45.0%
! GTCTCGGGTTAGATTCTCTT+CGG - chr1_4:1562965-1562984 Msa0142610:intron 45.0%
CCAAACTAGGCCACTGAAAT+TGG + chr1_4:1562993-1563012 None:intergenic 45.0%
CCAATTTCAGTGGCCTAGTT+TGG - chr1_4:1562990-1563009 Msa0142610:intron 45.0%
! AGCCACTAGAATTGGTCTAG+TGG - chr1_4:1563116-1563135 Msa0142610:intron 45.0%
CACCACTAGACCAATTCTAG+TGG + chr1_4:1563121-1563140 None:intergenic 45.0%
! CTAGAATTGGTCTAGTGGTG+AGG - chr1_4:1563121-1563140 Msa0142610:intron 45.0%
! AGAATTGGTCTAGTGGTGAG+GGG - chr1_4:1563123-1563142 Msa0142610:intron 45.0%
TTGTCTTCAGCCGAGTTATG+TGG + chr1_4:1563348-1563367 None:intergenic 45.0%
ATCCTCGTAGAAAGTCTTCC+CGG - chr1_4:1563849-1563868 Msa0142610:intron 45.0%
! CTGTAGGTTGAGAATGAGTC+TGG - chr1_4:1564255-1564274 Msa0142610:intron 45.0%
! GATGCTATTTGTCGGAAAGG+TGG - chr1_4:1564690-1564709 Msa0142610:intron 45.0%
!! CAGTTTGGAGTACTGGAGTT+GGG + chr1_4:1564985-1565004 None:intergenic 45.0%
CATTCACATTGCCACCAGTT+TGG + chr1_4:1565000-1565019 None:intergenic 45.0%
CCAACACATGCTACTGTTGA+TGG + chr1_4:1565302-1565321 None:intergenic 45.0%
CCATCAACAGTAGCATGTGT+TGG - chr1_4:1565299-1565318 Msa0142610:intron 45.0%
! ACTCTGCATCTGCTCTAAAC+TGG + chr1_4:1565431-1565450 None:intergenic 45.0%
! GTTTAGAGCAGATGCAGAGT+TGG - chr1_4:1565431-1565450 Msa0142610:CDS 45.0%
GTGACCGTCAAAATCTTACC+AGG - chr1_4:1565550-1565569 Msa0142610:CDS 45.0%
GACCGTCAAAATCTTACCAG+GGG - chr1_4:1565552-1565571 Msa0142610:CDS 45.0%
! TTGGCGGAGAAGGTACGATA+CGG + chr1_4:1558873-1558892 None:intergenic 50.0%
TGTTGGATGTTTGGCGGAGA+AGG + chr1_4:1558883-1558902 None:intergenic 50.0%
TGGGATTGGGATTGGGATTG+AGG + chr1_4:1558976-1558995 None:intergenic 50.0%
CAAACGGAGGAGAGATCTTC+GGG + chr1_4:1559030-1559049 None:intergenic 50.0%
CCAAACGGAGGAGAGATCTT+CGG + chr1_4:1559031-1559050 None:intergenic 50.0%
CGAAGATCTCTCCTCCGTTT+GGG - chr1_4:1559029-1559048 Msa0142610:three_prime_UTR 50.0%
GTAAGATAGGTCCCAAACGG+AGG + chr1_4:1559043-1559062 None:intergenic 50.0%
CGAAGTCGAGGAGGTAAGAT+AGG + chr1_4:1559056-1559075 None:intergenic 50.0%
GAATATCGTCGTCGAAGTCG+AGG + chr1_4:1559068-1559087 None:intergenic 50.0%
GGGTTAGAGTTTGGAAGAGG+AGG + chr1_4:1559099-1559118 None:intergenic 50.0%
! CGGATCCTATCGTTTTCGTC+TGG + chr1_4:1559126-1559145 None:intergenic 50.0%
TTAACCTCGGGTCACGCTTT+CGG + chr1_4:1559146-1559165 None:intergenic 50.0%
ACTTGCTCCAACTTTCTCGC+GGG - chr1_4:1559165-1559184 Msa0142610:CDS 50.0%
TACTTGACCCGCGAGAAAGT+TGG + chr1_4:1559175-1559194 None:intergenic 50.0%
TACCAGGGAAGAAACGAGCT+CGG - chr1_4:1559241-1559260 Msa0142610:CDS 50.0%
AAGGCTATCATCGACGGCAT+AGG - chr1_4:1559331-1559350 Msa0142610:CDS 50.0%
AGGCTATCATCGACGGCATA+GGG - chr1_4:1559332-1559351 Msa0142610:CDS 50.0%
! GACGGCATAGGGTTTGTTTG+CGG - chr1_4:1559343-1559362 Msa0142610:CDS 50.0%
TGGAGCGGCATAATACTAGG+AGG - chr1_4:1559585-1559604 Msa0142610:intron 50.0%
AGCGGCATAATACTAGGAGG+AGG - chr1_4:1559588-1559607 Msa0142610:intron 50.0%
AAGTTATCCTATCGCGCCGA+CGG + chr1_4:1559844-1559863 None:intergenic 50.0%
GCCGGATCATGAAGAAGAAC+CGG - chr1_4:1560147-1560166 Msa0142610:CDS 50.0%
GCTTTACGACTGGAATCCTG+CGG - chr1_4:1560458-1560477 Msa0142610:CDS 50.0%
AGCCTTCTTGGAAATTCCGC+AGG + chr1_4:1560477-1560496 None:intergenic 50.0%
CGGAATTTCCAAGAAGGCTG+CGG - chr1_4:1560478-1560497 Msa0142610:CDS 50.0%
CAGGCATACTTGCCAACCAT+TGG + chr1_4:1560619-1560638 None:intergenic 50.0%
TAGAGGGATATATCCGCCCT+GGG - chr1_4:1560645-1560664 Msa0142610:intron 50.0%
AGGGAGTGGAGAAATGTTGC+AGG + chr1_4:1560928-1560947 None:intergenic 50.0%
GCTCCCAGAAAGATGCTATC+TGG - chr1_4:1561144-1561163 Msa0142610:intron 50.0%
!! CATCCCACATGCTTTGAAGC+AGG - chr1_4:1561469-1561488 Msa0142610:CDS 50.0%
CAGCTCAGCTATGGGCAATA+AGG + chr1_4:1561833-1561852 None:intergenic 50.0%
CAGAGTAGCAGCTCAGCTAT+GGG + chr1_4:1561841-1561860 None:intergenic 50.0%
ACAGAGTAGCAGCTCAGCTA+TGG + chr1_4:1561842-1561861 None:intergenic 50.0%
AGTAGCAGTGGAGTGAGAGA+GGG + chr1_4:1561946-1561965 None:intergenic 50.0%
TCTCTCTCATGTGAGGATCG+AGG - chr1_4:1562160-1562179 Msa0142610:intron 50.0%
CATGTGAGGATCGAGGAAAG+AGG - chr1_4:1562167-1562186 Msa0142610:intron 50.0%
!! ATAAACCACTTGGGTTGGCC+TGG - chr1_4:1562904-1562923 Msa0142610:intron 50.0%
!! CTTTGGAGTGTGCTCCTTCA+AGG - chr1_4:1562943-1562962 Msa0142610:intron 50.0%
AGTGTGCTCCTTCAAGGTCT+CGG - chr1_4:1562949-1562968 Msa0142610:intron 50.0%
CTCTTCGGTCCCAATTTCAG+TGG - chr1_4:1562980-1562999 Msa0142610:intron 50.0%
GTAAGTATGCACGAGGTCCT+AGG - chr1_4:1563151-1563170 Msa0142610:intron 50.0%
CGTTCCGTCTCCACATAACT+CGG - chr1_4:1563335-1563354 Msa0142610:CDS 50.0%
TCAGCCGAGTTATGTGGAGA+CGG + chr1_4:1563342-1563361 None:intergenic 50.0%
TACCGGGAAGACTTTCTACG+AGG + chr1_4:1563854-1563873 None:intergenic 50.0%
TGACATGGACCAACTGCTGA+AGG - chr1_4:1564650-1564669 Msa0142610:CDS 50.0%
GACATGGACCAACTGCTGAA+GGG - chr1_4:1564651-1564670 Msa0142610:CDS 50.0%
TACACATGCCCTTCAGCAGT+TGG + chr1_4:1564662-1564681 None:intergenic 50.0%
GCTATTTGTCGGAAAGGTGG+AGG - chr1_4:1564693-1564712 Msa0142610:intron 50.0%
!! TTTTGGGAACTGCACTGAGC+AGG + chr1_4:1564753-1564772 None:intergenic 50.0%
ACATAAATGCACGGCCCACT+AGG + chr1_4:1564941-1564960 None:intergenic 50.0%
!! CCAGTTTGGAGTACTGGAGT+TGG + chr1_4:1564986-1565005 None:intergenic 50.0%
CCAACTCCAGTACTCCAAAC+TGG - chr1_4:1564983-1565002 Msa0142610:intron 50.0%
ACTCCAGTACTCCAAACTGG+TGG - chr1_4:1564986-1565005 Msa0142610:intron 50.0%
! TTGCCACCAGTTTGGAGTAC+TGG + chr1_4:1564992-1565011 None:intergenic 50.0%
TCGAGATCTCAAGAATCCCC+TGG + chr1_4:1565571-1565590 None:intergenic 50.0%
TCATGGGAGGGTTAACGAGT+TGG - chr1_4:1565653-1565672 Msa0142610:CDS 50.0%
!! GGTACGATACGGTGGTGGAT+GGG + chr1_4:1558862-1558881 None:intergenic 55.0%
!! AGGTACGATACGGTGGTGGA+TGG + chr1_4:1558863-1558882 None:intergenic 55.0%
! GAGAAGGTACGATACGGTGG+TGG + chr1_4:1558867-1558886 None:intergenic 55.0%
AGATCTTCGGGAGGGTCCAT+TGG + chr1_4:1559018-1559037 None:intergenic 55.0%
CCGAAGATCTCTCCTCCGTT+TGG - chr1_4:1559028-1559047 Msa0142610:three_prime_UTR 55.0%
TATCGTCGTCGAAGTCGAGG+AGG + chr1_4:1559065-1559084 None:intergenic 55.0%
TTTGGAAGAGGAGGGAGCTG+TGG + chr1_4:1559090-1559109 None:intergenic 55.0%
CTTATTTCCGTCGGCGCGAT+AGG - chr1_4:1559834-1559853 Msa0142610:intron 55.0%
CTAGAGGGATATATCCGCCC+TGG - chr1_4:1560644-1560663 Msa0142610:intron 55.0%
TCGTCAGGATCGTACACCCA+GGG + chr1_4:1560664-1560683 None:intergenic 55.0%
ATCGTCAGGATCGTACACCC+AGG + chr1_4:1560665-1560684 None:intergenic 55.0%
AGGCAAACATGCAGGCACCT+AGG - chr1_4:1561434-1561453 Msa0142610:CDS 55.0%
! ACTTGCTGCGGCCCAAGTTT+CGG - chr1_4:1561524-1561543 Msa0142610:intron 55.0%
GAGAGGGGAAATCGCGTAGA+GGG + chr1_4:1561930-1561949 None:intergenic 55.0%
AGAGAGGGGAAATCGCGTAG+AGG + chr1_4:1561931-1561950 None:intergenic 55.0%
GTAGCAGTGGAGTGAGAGAG+GGG + chr1_4:1561945-1561964 None:intergenic 55.0%
GAGTAGCAGTGGAGTGAGAG+AGG + chr1_4:1561947-1561966 None:intergenic 55.0%
!! GTGGTGTTGGCTTGGGACTT+TGG - chr1_4:1562926-1562945 Msa0142610:intron 55.0%
GTGTGCTCCTTCAAGGTCTC+GGG - chr1_4:1562950-1562969 Msa0142610:intron 55.0%
TGGTCTAGTGGTGAGGGGTT+CGG - chr1_4:1563128-1563147 Msa0142610:intron 55.0%
GGTTCGGGTAAGTATGCACG+AGG - chr1_4:1563144-1563163 Msa0142610:intron 55.0%
!! TGGTGTACAACGGTGTCGGT+CGG + chr1_4:1563179-1563198 None:intergenic 55.0%
CCTCAATAAATGCAGGCCCC+AGG + chr1_4:1563434-1563453 None:intergenic 55.0%
CCTGGGGCCTGCATTTATTG+AGG - chr1_4:1563431-1563450 Msa0142610:intron 55.0%
! GCGGAGAAGGTACGATACGG+TGG + chr1_4:1558870-1558889 None:intergenic 60.0%
CTTCGGGAGGGTCCATTGGA+GGG + chr1_4:1559014-1559033 None:intergenic 60.0%
TCTTCGGGAGGGTCCATTGG+AGG + chr1_4:1559015-1559034 None:intergenic 60.0%
CGGAGGAGAGATCTTCGGGA+GGG + chr1_4:1559026-1559045 None:intergenic 60.0%
ACGGAGGAGAGATCTTCGGG+AGG + chr1_4:1559027-1559046 None:intergenic 60.0%
TCGAGTTCGGGGCATGCACA+TGG + chr1_4:1559198-1559217 None:intergenic 60.0%
GTCCGAGCTCGTTTCTTCCC+TGG + chr1_4:1559246-1559265 None:intergenic 60.0%
GCTTGCAGTGCCAAACAGGC+CGG - chr1_4:1560424-1560443 Msa0142610:CDS 60.0%
CTTGCAGTGCCAAACAGGCC+GGG - chr1_4:1560425-1560444 Msa0142610:CDS 60.0%
ACTTGGAGCCGCAGCCTTCT+TGG + chr1_4:1560489-1560508 None:intergenic 60.0%
TCAGGATCGTACACCCAGGG+CGG + chr1_4:1560661-1560680 None:intergenic 60.0%
!! AACCACTTGGGTTGGCCTGG+TGG - chr1_4:1562907-1562926 Msa0142610:intron 60.0%
!! TTGGGTTGGCCTGGTGGTGT+TGG - chr1_4:1562913-1562932 Msa0142610:intron 60.0%
!! TTGGCCTGGTGGTGTTGGCT+TGG - chr1_4:1562918-1562937 Msa0142610:intron 60.0%
!! TGGCCTGGTGGTGTTGGCTT+GGG - chr1_4:1562919-1562938 Msa0142610:intron 60.0%
AGTCCCAAGCCAACACCACC+AGG + chr1_4:1562925-1562944 None:intergenic 60.0%
GGTCTAGTGGTGAGGGGTTC+GGG - chr1_4:1563129-1563148 Msa0142610:intron 60.0%
!! AACGGTGTCGGTCGGAACCT+AGG + chr1_4:1563171-1563190 None:intergenic 60.0%
! GGATCCGAAAGCGTGACCCG+AGG - chr1_4:1559139-1559158 Msa0142610:CDS 65.0%
TCGGCGCGTTGTCAGGTTCC+TGG - chr1_4:1559282-1559301 Msa0142610:CDS 65.0%
CACCACCAGGCCAACCCAAG+TGG + chr1_4:1562912-1562931 None:intergenic 65.0%
! GGCTGCATCGGCGCGTTGTC+AGG - chr1_4:1559275-1559294 Msa0142610:CDS 70.0%
ACGAGCTCGGACTGCCCGCG+CGG - chr1_4:1559254-1559273 Msa0142610:CDS 75.0%
GACTGCCCGCGCGGCTGCAT+CGG - chr1_4:1559263-1559282 Msa0142610:CDS 75.0%
! AACGCGCCGATGCAGCCGCG+CGG + chr1_4:1559272-1559291 None:intergenic 75.0%
!! ACGCGCCGATGCAGCCGCGC+GGG + chr1_4:1559271-1559290 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 1558794 1565999 1558794 ID=Msa0142610;Name=Msa0142610
chr1_4 mRNA 1558794 1565999 1558794 ID=Msa0142610-mRNA-1;Parent=Msa0142610;Name=Msa0142610-mRNA-1;_AED=0.05;_eAED=0.05;_QI=167|1|1|1|1|1|10|289|766
chr1_4 exon 1558794 1559370 1558794 ID=Msa0142610-mRNA-1:exon:548;Parent=Msa0142610-mRNA-1
chr1_4 exon 1559987 1560532 1559987 ID=Msa0142610-mRNA-1:exon:547;Parent=Msa0142610-mRNA-1
chr1_4 exon 1561341 1561503 1561341 ID=Msa0142610-mRNA-1:exon:546;Parent=Msa0142610-mRNA-1
chr1_4 exon 1563248 1563383 1563248 ID=Msa0142610-mRNA-1:exon:545;Parent=Msa0142610-mRNA-1
chr1_4 exon 1563574 1563688 1563574 ID=Msa0142610-mRNA-1:exon:544;Parent=Msa0142610-mRNA-1
chr1_4 exon 1564075 1564182 1564075 ID=Msa0142610-mRNA-1:exon:543;Parent=Msa0142610-mRNA-1
chr1_4 exon 1564287 1564361 1564287 ID=Msa0142610-mRNA-1:exon:542;Parent=Msa0142610-mRNA-1
chr1_4 exon 1564463 1564689 1564463 ID=Msa0142610-mRNA-1:exon:541;Parent=Msa0142610-mRNA-1
chr1_4 exon 1565089 1565261 1565089 ID=Msa0142610-mRNA-1:exon:540;Parent=Msa0142610-mRNA-1
chr1_4 exon 1565363 1565999 1565363 ID=Msa0142610-mRNA-1:exon:539;Parent=Msa0142610-mRNA-1
chr1_4 five_prime_UTR 1565833 1565999 1565833 ID=Msa0142610-mRNA-1:five_prime_utr;Parent=Msa0142610-mRNA-1
chr1_4 CDS 1565363 1565832 1565363 ID=Msa0142610-mRNA-1:cds;Parent=Msa0142610-mRNA-1
chr1_4 CDS 1565089 1565261 1565089 ID=Msa0142610-mRNA-1:cds;Parent=Msa0142610-mRNA-1
chr1_4 CDS 1564463 1564689 1564463 ID=Msa0142610-mRNA-1:cds;Parent=Msa0142610-mRNA-1
chr1_4 CDS 1564287 1564361 1564287 ID=Msa0142610-mRNA-1:cds;Parent=Msa0142610-mRNA-1
chr1_4 CDS 1564075 1564182 1564075 ID=Msa0142610-mRNA-1:cds;Parent=Msa0142610-mRNA-1
chr1_4 CDS 1563574 1563688 1563574 ID=Msa0142610-mRNA-1:cds;Parent=Msa0142610-mRNA-1
chr1_4 CDS 1563248 1563383 1563248 ID=Msa0142610-mRNA-1:cds;Parent=Msa0142610-mRNA-1
chr1_4 CDS 1561341 1561503 1561341 ID=Msa0142610-mRNA-1:cds;Parent=Msa0142610-mRNA-1
chr1_4 CDS 1559987 1560532 1559987 ID=Msa0142610-mRNA-1:cds;Parent=Msa0142610-mRNA-1
chr1_4 CDS 1559083 1559370 1559083 ID=Msa0142610-mRNA-1:cds;Parent=Msa0142610-mRNA-1
chr1_4 three_prime_UTR 1558794 1559082 1558794 ID=Msa0142610-mRNA-1:three_prime_utr;Parent=Msa0142610-mRNA-1
Gene Sequence

>Msa0142610

ATGGAATCCAAACCTCAATCCCAATCCCAATCCCAATCCCAATCAATTCTCCCTCCAATGGACCCTCCCGAAGATCTCTCCTCCGTTTGGGACCTATCTTACCTCCTCGACTTCGACGACGATATTCCACAGCTCCCTCCTCTTCCAAACTCTAACCCTGATCCAGACGAAAACGATAGGATCCGAAAGCGTGACCCGAGGTTAACTTGCTCCAACTTTCTCGCGGGTCAAGTACCATGTGCATGCCCCGAACTCGATGCTTTGTTAGAAGATAACGGTTTACCAGGGAAGAAACGAGCTCGGACTGCCCGCGCGGCTGCATCGGCGCGTTGTCAGGTTCCTGGTTGTGAAGTTGATATTTCTGAGCTTAAAGGCTATCATCGACGGCATAGGGTTTGTTTGCGGTGTGCAAATGCTACTACTGTTGTTCTTGATGGTGATGTGAAGAGATACTGTCAACAGTGTGGGAAATTTCATGTTTTATCGGATTTCGATGAAGGGAAACGGAGTTGTAGAAGGAAATTGGAGCGGCATAATACTAGGAGGAGGAGAAAGGCTGTAGATTCTGCAGTAGGAGTTGATAATGAAGTTCAAACTGTCACTCAAAATGATGATTCCAATTGTGATGGAGAACTAGGAATAGATTATTCGAATTTGAGTAGTGAGAATATCGAAAAAAGAGTGTTGCCGGATCATGAAGAAGAACCGGTTGTTAATGGTTCGTCAACACCAGAGACCCAGAATATTAACGGTGACAGCGTCGTTTCCTTTGTTGCTTCTGCTGAAACACAAGCGAATATTGGAAAAGATGTTTCCGATCCTTCTAAGTCGCCTTCATATTGTGACAATAAGAGTGATTATTCGTCTATGTGCCAAACAGGCCGGGTTTCTTTTAAGCTTTACGACTGGAATCCTGCGGAATTTCCAAGAAGGCTGCGGCTCCAAATATTCCAATGGTTGGCAAGTATGCCTGTAGAGCTAGAGGGATATATCCGCCCTGGGTGTACGATCCTGACGATTTTTATTGCAATGCCAAATATTATGTGGATAAATTTACTCAAAGACCCTATGTATTATGTGCGTGATCTTGTTGCTCCCAGAAAGATGCTATCTGGAAGAGGAACCGCTCTAATTCATCTGAATGATATGATCTTCCGTGTAATGAAAGATGGAATTTCTGTGACAAAAGTCGAGGCAAACATGCAGGCACCTAGGCTTCACTATATTCATCCCACATGCTTTGAAGCAGGAAAACCCATGGAATTTTTCGCTTGTGGAAGTAACTTGCTGCGGCCCAAGTTTCGGCTTCTTGTATCTTTTTATGGAAAGTATCTGAAGTGTGAGTATTGCGTTCCGTCTCCACATAACTCGGCTGAAGACAATATTTCTTGTGCTTTTGATAATCAGTTATATAAGATATGTGTCCCTCATATTGAGGAAAATCTCCTGGGGCCTGCATTTATTGAGGTTGAGAATGAGTCTGGTTTATCAAACTTTATTCCTGTACTTATTGGGGATAAAGAAATTTGCACTGAAATGAAGATATTGCAACAAAAATTAGACGCTTCTCTCCTTTCTAAACAATTTCGGTCTGCATCTGGCAGTTCTATTTGTAGCTCATGTGAAGCTTTTGCACATATTCACACATCATCATCAGACTTGCTTGTAGATATAGCATGGTTACTTAAAGACCCGACTTCAGAAATTTTTGACAGAATGGTATCTGCTTCACAGATTCAAAGATATTGCTATTTGTTGGATTTTCTAATATGCAATGATTCAACTATCATTTTGGGAAAAATATTGCCAAATTTGATAAGCATAACAAAAAGCATGAAATCCAATATAAGTGATGTTGACATGGACCAACTGCTGAAGGGCATGTGTAATGCTAGAGATGCTATTTGTCGGAAAGGTGGAGGTATAGTTTTGAACTCCAAAATGGAAGGCTTCAAACCTGCTCAGTGCAGTTCCCAAAACGCCAAGTTATCAGTTGTTGAAGATAACAGTCAGGGTATCCAGTTTAGAGCAGATGCAGAGTTGGGAGTTCTGAGCAGTCTCGCTTCCGATGAAAAAAATCAGAAGATACCGCTTTTGAAAAAGGATATTATAATGAATATGGAAGAGTTGCCTAAAAGATGTGACCGTCAAAATCTTACCAGGGGATTCTTGAGATCTCGACCAACTATTTTTGTGCTTGTATCACTTGTTGTTTGTCTTGTGGTATGTGTATCTATCTTTCATCATGGGAGGGTTAACGAGTTGGCAGTATCCATTAGAAGGTGTTTGTTCAACCATTGA
Protein sequence

>Msa0142610

MESKPQSQSQSQSQSILPPMDPPEDLSSVWDLSYLLDFDDDIPQLPPLPNSNPDPDENDRIRKRDPRLTCSNFLAGQVPCACPELDALLEDNGLPGKKRARTARAAASARCQVPGCEVDISELKGYHRRHRVCLRCANATTVVLDGDVKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNTRRRRKAVDSAVGVDNEVQTVTQNDDSNCDGELGIDYSNLSSENIEKRVLPDHEEEPVVNGSSTPETQNINGDSVVSFVASAETQANIGKDVSDPSKSPSYCDNKSDYSSMCQTGRVSFKLYDWNPAEFPRRLRLQIFQWLASMPVELEGYIRPGCTILTIFIAMPNIMWINLLKDPMYYVRDLVAPRKMLSGRGTALIHLNDMIFRVMKDGISVTKVEANMQAPRLHYIHPTCFEAGKPMEFFACGSNLLRPKFRLLVSFYGKYLKCEYCVPSPHNSAEDNISCAFDNQLYKICVPHIEENLLGPAFIEVENESGLSNFIPVLIGDKEICTEMKILQQKLDASLLSKQFRSASGSSICSSCEAFAHIHTSSSDLLVDIAWLLKDPTSEIFDRMVSASQIQRYCYLLDFLICNDSTIILGKILPNLISITKSMKSNISDVDMDQLLKGMCNARDAICRKGGGIVLNSKMEGFKPAQCSSQNAKLSVVEDNSQGIQFRADAELGVLSSLASDEKNQKIPLLKKDIIMNMEELPKRCDRQNLTRGFLRSRPTIFVLVSLVVCLVVCVSIFHHGRVNELAVSIRRCLFNH*