Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195390 | XP_013462681.3 | 96.697 | 757 | 25 | 0 | 8 | 764 | 2 | 758 | 0.0 | 1519 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195390 | sp|Q8S9G8|SPL7_ARATH | 46.028 | 793 | 367 | 16 | 14 | 758 | 15 | 794 | 0.0 | 659 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195390 | A0A396J706 | 96.697 | 757 | 25 | 0 | 8 | 764 | 2 | 758 | 0.0 | 1519 |
Gene ID | Type | Classification |
---|---|---|
Msa0195390 | TF | SBP |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0142610 | Msa0195390 | 0.900310 | 8.324160e-78 | -8.615850e-47 |
Msa0195390 | Msa0195510 | 0.997908 | 9.113851e-252 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195390 | MtrunA17_Chr2g0286661 | 96.697 | 757 | 25 | 0 | 8 | 764 | 2 | 758 | 0.0 | 1519 |
Msa0195390 | MtrunA17_Chr1g0194121 | 27.607 | 326 | 199 | 11 | 287 | 598 | 447 | 749 | 1.57e-28 | 122 |
Msa0195390 | MtrunA17_Chr1g0194121 | 48.315 | 89 | 46 | 0 | 94 | 182 | 132 | 220 | 2.66e-21 | 99.8 |
Msa0195390 | MtrunA17_Chr7g0270541 | 26.176 | 340 | 213 | 10 | 290 | 615 | 449 | 764 | 1.25e-25 | 113 |
Msa0195390 | MtrunA17_Chr7g0270541 | 46.809 | 94 | 48 | 1 | 96 | 187 | 130 | 223 | 6.75e-22 | 101 |
Msa0195390 | MtrunA17_Chr1g0162871 | 29.600 | 250 | 161 | 4 | 278 | 519 | 449 | 691 | 3.36e-25 | 112 |
Msa0195390 | MtrunA17_Chr1g0162871 | 38.323 | 167 | 82 | 6 | 46 | 201 | 41 | 197 | 2.08e-22 | 103 |
Msa0195390 | MtrunA17_Chr2g0302791 | 24.688 | 401 | 266 | 9 | 290 | 677 | 465 | 842 | 4.90e-24 | 108 |
Msa0195390 | MtrunA17_Chr2g0302791 | 48.958 | 96 | 47 | 1 | 96 | 189 | 124 | 219 | 6.14e-22 | 101 |
Msa0195390 | MtrunA17_Chr8g0334671 | 55.000 | 80 | 36 | 0 | 103 | 182 | 181 | 260 | 6.97e-24 | 103 |
Msa0195390 | MtrunA17_Chr4g0046991 | 56.410 | 78 | 34 | 0 | 109 | 186 | 73 | 150 | 2.58e-23 | 97.1 |
Msa0195390 | MtrunA17_Chr3g0122411 | 37.956 | 137 | 82 | 2 | 94 | 228 | 150 | 285 | 4.22e-22 | 100 |
Msa0195390 | MtrunA17_Chr7g0258471 | 46.512 | 86 | 46 | 0 | 97 | 182 | 130 | 215 | 4.93e-22 | 99.4 |
Msa0195390 | MtrunA17_Chr5g0420051 | 48.913 | 92 | 46 | 1 | 96 | 186 | 167 | 258 | 4.94e-22 | 99.8 |
Msa0195390 | MtrunA17_Chr7g0231911 | 54.217 | 83 | 38 | 0 | 105 | 187 | 145 | 227 | 6.18e-22 | 97.4 |
Msa0195390 | MtrunA17_Chr8g0386271 | 47.727 | 88 | 45 | 1 | 96 | 182 | 85 | 172 | 1.93e-21 | 97.4 |
Msa0195390 | MtrunA17_Chr7g0224821 | 45.977 | 87 | 47 | 0 | 96 | 182 | 64 | 150 | 2.37e-21 | 96.7 |
Msa0195390 | MtrunA17_Chr2g0308321 | 47.253 | 91 | 47 | 1 | 96 | 185 | 157 | 247 | 2.51e-21 | 98.6 |
Msa0195390 | MtrunA17_Chr4g0061651 | 47.872 | 94 | 46 | 2 | 96 | 188 | 112 | 203 | 2.68e-21 | 97.8 |
Msa0195390 | MtrunA17_Chr8g0360361 | 40.385 | 104 | 62 | 0 | 109 | 212 | 65 | 168 | 1.32e-19 | 87.0 |
Msa0195390 | MtrunA17_Chr2g0282521 | 43.956 | 91 | 51 | 0 | 96 | 186 | 51 | 141 | 2.05e-19 | 85.5 |
Msa0195390 | MtrunA17_Chr8g0377401 | 52.055 | 73 | 35 | 0 | 109 | 181 | 162 | 234 | 3.85e-19 | 87.8 |
Msa0195390 | MtrunA17_Chr8g0377421 | 40.833 | 120 | 60 | 2 | 80 | 188 | 95 | 214 | 4.42e-19 | 89.0 |
Msa0195390 | MtrunA17_Chr3g0132091 | 43.478 | 92 | 52 | 0 | 91 | 182 | 55 | 146 | 7.55e-19 | 89.0 |
Msa0195390 | MtrunA17_Chr8g0377431 | 45.070 | 71 | 39 | 0 | 94 | 164 | 136 | 206 | 7.34e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195390 | AT5G18830.3 | 46.028 | 793 | 367 | 16 | 14 | 758 | 15 | 794 | 0.0 | 659 |
Msa0195390 | AT5G18830.1 | 46.028 | 793 | 367 | 16 | 14 | 758 | 15 | 794 | 0.0 | 659 |
Msa0195390 | AT5G18830.2 | 45.583 | 781 | 362 | 13 | 14 | 758 | 15 | 768 | 0.0 | 657 |
Msa0195390 | AT1G76580.1 | 28.629 | 248 | 162 | 4 | 278 | 518 | 482 | 721 | 5.99e-25 | 112 |
Msa0195390 | AT1G76580.1 | 41.905 | 105 | 58 | 1 | 108 | 212 | 113 | 214 | 1.17e-21 | 101 |
Msa0195390 | AT1G53160.3 | 49.020 | 102 | 47 | 2 | 94 | 190 | 34 | 135 | 8.54e-25 | 102 |
Msa0195390 | AT2G33810.1 | 47.826 | 92 | 48 | 0 | 95 | 186 | 40 | 131 | 4.29e-24 | 99.0 |
Msa0195390 | AT1G02065.1 | 51.613 | 93 | 44 | 1 | 101 | 193 | 180 | 271 | 6.18e-24 | 104 |
Msa0195390 | AT1G69170.1 | 48.421 | 95 | 49 | 0 | 91 | 185 | 106 | 200 | 1.76e-23 | 104 |
Msa0195390 | AT2G47070.1 | 51.042 | 96 | 40 | 2 | 88 | 182 | 90 | 179 | 1.84e-23 | 107 |
Msa0195390 | AT2G47070.1 | 27.385 | 325 | 190 | 10 | 290 | 600 | 360 | 652 | 4.32e-22 | 102 |
Msa0195390 | AT1G27360.2 | 53.333 | 75 | 35 | 0 | 108 | 182 | 174 | 248 | 9.92e-23 | 101 |
Msa0195390 | AT1G27360.1 | 53.333 | 75 | 35 | 0 | 108 | 182 | 174 | 248 | 9.92e-23 | 101 |
Msa0195390 | AT1G27360.3 | 53.333 | 75 | 35 | 0 | 108 | 182 | 174 | 248 | 9.92e-23 | 101 |
Msa0195390 | AT1G27360.4 | 53.333 | 75 | 35 | 0 | 108 | 182 | 174 | 248 | 9.92e-23 | 101 |
Msa0195390 | AT1G27370.6 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.05e-22 | 100 |
Msa0195390 | AT3G57920.1 | 45.714 | 105 | 55 | 2 | 87 | 189 | 35 | 139 | 1.30e-22 | 100 |
Msa0195390 | AT1G27370.1 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.39e-22 | 101 |
Msa0195390 | AT1G27370.5 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.39e-22 | 101 |
Msa0195390 | AT1G27370.3 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.39e-22 | 101 |
Msa0195390 | AT1G27370.2 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.39e-22 | 101 |
Msa0195390 | AT1G27370.4 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.39e-22 | 101 |
Msa0195390 | AT1G27370.7 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.39e-22 | 101 |
Msa0195390 | AT3G60030.1 | 55.696 | 79 | 35 | 0 | 109 | 187 | 127 | 205 | 1.50e-22 | 103 |
Msa0195390 | AT3G60030.1 | 25.305 | 328 | 201 | 11 | 287 | 600 | 398 | 695 | 2.48e-19 | 94.0 |
Msa0195390 | AT1G53160.2 | 45.000 | 120 | 56 | 3 | 94 | 203 | 34 | 153 | 1.83e-22 | 95.5 |
Msa0195390 | AT1G53160.1 | 45.000 | 120 | 56 | 3 | 94 | 203 | 34 | 153 | 1.83e-22 | 95.5 |
Msa0195390 | AT1G20980.1 | 42.857 | 119 | 64 | 1 | 93 | 207 | 104 | 222 | 5.84e-22 | 102 |
Msa0195390 | AT1G20980.1 | 24.779 | 339 | 225 | 8 | 278 | 604 | 485 | 805 | 4.42e-21 | 99.4 |
Msa0195390 | AT1G76580.3 | 41.905 | 105 | 58 | 1 | 108 | 212 | 113 | 214 | 6.69e-22 | 101 |
Msa0195390 | AT1G76580.3 | 30.682 | 176 | 114 | 2 | 278 | 446 | 482 | 656 | 5.31e-21 | 98.6 |
Msa0195390 | AT2G47070.2 | 27.385 | 325 | 190 | 10 | 290 | 600 | 231 | 523 | 7.34e-22 | 101 |
Msa0195390 | AT2G47070.2 | 56.250 | 48 | 21 | 0 | 135 | 182 | 3 | 50 | 4.22e-12 | 70.5 |
Msa0195390 | AT1G76580.2 | 41.905 | 105 | 58 | 1 | 108 | 212 | 113 | 214 | 7.61e-22 | 101 |
Msa0195390 | AT1G76580.2 | 30.682 | 176 | 114 | 2 | 278 | 446 | 482 | 656 | 4.38e-21 | 99.0 |
Msa0195390 | AT5G43270.3 | 53.247 | 77 | 36 | 0 | 106 | 182 | 166 | 242 | 1.97e-21 | 98.2 |
Msa0195390 | AT5G43270.1 | 53.247 | 77 | 36 | 0 | 106 | 182 | 166 | 242 | 1.97e-21 | 98.2 |
Msa0195390 | AT5G43270.2 | 53.247 | 77 | 36 | 0 | 106 | 182 | 166 | 242 | 1.97e-21 | 98.2 |
Msa0195390 | AT3G15270.1 | 53.165 | 79 | 37 | 0 | 109 | 187 | 63 | 141 | 2.95e-20 | 89.4 |
Msa0195390 | AT5G50570.1 | 50.000 | 74 | 37 | 0 | 109 | 182 | 101 | 174 | 5.21e-20 | 93.2 |
Msa0195390 | AT5G50570.2 | 50.000 | 74 | 37 | 0 | 109 | 182 | 101 | 174 | 5.21e-20 | 93.2 |
Msa0195390 | AT5G50670.1 | 50.000 | 74 | 37 | 0 | 109 | 182 | 101 | 174 | 5.21e-20 | 93.2 |
Msa0195390 | AT5G50670.2 | 50.000 | 74 | 37 | 0 | 109 | 182 | 101 | 174 | 5.21e-20 | 93.2 |
Msa0195390 | AT2G42200.1 | 52.000 | 75 | 36 | 0 | 108 | 182 | 73 | 147 | 9.45e-19 | 89.4 |
Msa0195390 | AT1G02065.2 | 48.214 | 56 | 29 | 0 | 101 | 156 | 180 | 235 | 1.26e-11 | 65.9 |
Find 195 sgRNAs with CRISPR-Local
Find 501 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATGATTCAACTATCATTT+TGG | 0.092702 | 2_1:+12240421 | Msa0195390:CDS |
TCTTCCAGATAGCATCTTTC+TGG | 0.114884 | 2_1:-12237002 | None:intergenic |
AACTTTATTCCTGTACTTAT+TGG | 0.134941 | 2_1:+12240140 | Msa0195390:CDS |
ACATTTATCCACATAATATT+TGG | 0.170789 | 2_1:-12236552 | None:intergenic |
ATACCTTCAACCCATAAAAT+TGG | 0.177084 | 2_1:-12241730 | None:intergenic |
GTTGATATTTCTGAGCTTAA+AGG | 0.179143 | 2_1:+12235166 | Msa0195390:CDS |
CGCTGTCACCGTTAATATTC+TGG | 0.195200 | 2_1:-12236052 | None:intergenic |
TTTGTTATGCTTATCAAATT+TGG | 0.209664 | 2_1:-12240455 | None:intergenic |
ACTTTATTCCTGTACTTATT+GGG | 0.226415 | 2_1:+12240141 | Msa0195390:CDS |
GAAGAAGAACCGGTTGTTAA+TGG | 0.267583 | 2_1:+12236011 | Msa0195390:CDS |
ACTTGGAGCCGCAGCCTTCT+TGG | 0.274103 | 2_1:-12236340 | None:intergenic |
AAAGGATATTATAATGAATA+TGG | 0.277893 | 2_1:+12241364 | Msa0195390:CDS |
TTGGGATTGGGATTGAGGTT+TGG | 0.287122 | 2_1:-12234828 | None:intergenic |
CTCTCCTTTCTAAACAATTT+CGG | 0.289124 | 2_1:+12240216 | Msa0195390:CDS |
CAACTGATAACTTGGCGTTT+TGG | 0.290551 | 2_1:-12240622 | None:intergenic |
AGGTTTGAAGCCTTCCATTT+TGG | 0.297680 | 2_1:-12240585 | None:intergenic |
GGCTGCATCGGCGCGTTGTC+AGG | 0.298075 | 2_1:+12235129 | Msa0195390:CDS |
CATGTCAACATCACTTATAT+TGG | 0.320229 | 2_1:-12240489 | None:intergenic |
TTAACCTCGGGTCACGCTTT+CGG | 0.322042 | 2_1:-12234997 | None:intergenic |
TGGGATTGGGATTGGGATTG+AGG | 0.330701 | 2_1:-12234833 | None:intergenic |
GCTGAAACACAAGCGAATAT+TGG | 0.331955 | 2_1:+12236095 | Msa0195390:CDS |
ACGGAGTTGTAGAAGGAAAT+TGG | 0.333246 | 2_1:+12235419 | Msa0195390:CDS |
CCGAAGATCTCTCCTCCGTT+TGG | 0.333564 | 2_1:+12234882 | Msa0195390:CDS |
TCGGCGCGTTGTCAGGTTCC+TGG | 0.339982 | 2_1:+12235136 | Msa0195390:CDS |
TCTAACAAAGCATCGAGTTC+GGG | 0.348406 | 2_1:-12235061 | None:intergenic |
TAAAAGAAACCCGGCCTGTT+TGG | 0.355695 | 2_1:-12236288 | None:intergenic |
GCTACTACTGTTGTTCTTGA+TGG | 0.355747 | 2_1:+12235229 | Msa0195390:CDS |
CTGTAGGTTGAGAATGAGTC+TGG | 0.356081 | 2_1:+12240110 | Msa0195390:intron |
AATTGATTGGGATTGGGATT+GGG | 0.360219 | 2_1:-12234840 | None:intergenic |
TCAAAGATATTGCTATTTGT+TGG | 0.367649 | 2_1:+12240385 | Msa0195390:CDS |
GACTGCCCGCGCGGCTGCAT+CGG | 0.372733 | 2_1:+12235117 | Msa0195390:CDS |
TCCTAGTTCTCCATCACAAT+TGG | 0.372983 | 2_1:-12235532 | None:intergenic |
GAATTGATTGGGATTGGGAT+TGG | 0.376980 | 2_1:-12234841 | None:intergenic |
TCTGGATCAGGGTTAGAGTT+TGG | 0.377437 | 2_1:-12234959 | None:intergenic |
TAAGAGTGATTATTCGTCTA+TGG | 0.379736 | 2_1:+12236163 | Msa0195390:CDS |
ACTCTGCATCTGCTCTAAAC+TGG | 0.380253 | 2_1:-12241283 | None:intergenic |
CGAAGATCTCTCCTCCGTTT+GGG | 0.382192 | 2_1:+12234883 | Msa0195390:CDS |
GTTGAACAAACACCTTCTAA+TGG | 0.384218 | 2_1:-12241537 | None:intergenic |
CTAAATAAATAGATGTCATT+AGG | 0.385367 | 2_1:+12241620 | Msa0195390:three_prime_UTR |
TTCTAACAAAGCATCGAGTT+CGG | 0.397622 | 2_1:-12235062 | None:intergenic |
ACTTGCTGCGGCCCAAGTTT+CGG | 0.398259 | 2_1:+12237378 | Msa0195390:CDS |
GGTGGTGGTTAGAAAGTTGT+TGG | 0.399948 | 2_1:-12234757 | None:intergenic |
AAACAATTTCGGTCTGCATC+TGG | 0.400091 | 2_1:+12240227 | Msa0195390:CDS |
GAGGGAGAATTGATTGGGAT+TGG | 0.402173 | 2_1:-12234847 | None:intergenic |
TACCTTCAACCCATAAAATT+GGG | 0.402247 | 2_1:-12241729 | None:intergenic |
TTAGAAAGTTGTTGGATGTT+TGG | 0.403104 | 2_1:-12234749 | None:intergenic |
CCAGAGACCCAGAATATTAA+CGG | 0.418853 | 2_1:+12236044 | Msa0195390:CDS |
CCATTGGAGGGAGAATTGAT+TGG | 0.421524 | 2_1:-12234853 | None:intergenic |
CATTGGAGGGAGAATTGATT+GGG | 0.421579 | 2_1:-12234852 | None:intergenic |
GAAAATTACATACCGAAACT+TGG | 0.426287 | 2_1:-12237390 | None:intergenic |
AGGGAGAATTGATTGGGATT+GGG | 0.426520 | 2_1:-12234846 | None:intergenic |
TTAGGACAATAGATGTCATT+AGG | 0.430511 | 2_1:+12241638 | Msa0195390:three_prime_UTR |
CAAACGGAGGAGAGATCTTC+GGG | 0.431075 | 2_1:-12234881 | None:intergenic |
CTTGCAGTGCCAAACAGGCC+GGG | 0.431911 | 2_1:+12236279 | Msa0195390:intron |
CTTCCAGATAGCATCTTTCT+GGG | 0.432338 | 2_1:-12237001 | None:intergenic |
ACCGGTTCTTCTTCATGATC+CGG | 0.435427 | 2_1:-12236002 | None:intergenic |
GCTCCCAGAAAGATGCTATC+TGG | 0.435998 | 2_1:+12236998 | Msa0195390:CDS |
ATCTTCAACAACTGATAACT+TGG | 0.440620 | 2_1:-12240630 | None:intergenic |
AAGGGAAACGGAGTTGTAGA+AGG | 0.440946 | 2_1:+12235412 | Msa0195390:CDS |
GCTTGCAGTGCCAAACAGGC+CGG | 0.446028 | 2_1:+12236278 | Msa0195390:intron |
CAATATGAAGGCGACTTAGA+AGG | 0.446383 | 2_1:-12236134 | None:intergenic |
TTTAGAGCAGATGCAGAGTT+GGG | 0.447298 | 2_1:+12241287 | Msa0195390:CDS |
CCGTTAATATTCTGGGTCTC+TGG | 0.448445 | 2_1:-12236044 | None:intergenic |
TTTGGAAGAGGAGGGAGCTG+TGG | 0.449145 | 2_1:-12234941 | None:intergenic |
CCAAACGGAGGAGAGATCTT+CGG | 0.450370 | 2_1:-12234882 | None:intergenic |
TTGCAATGCCAAATATTATG+TGG | 0.451793 | 2_1:+12236544 | Msa0195390:CDS |
AGATCTTCGGGAGGGTCCAT+TGG | 0.455600 | 2_1:-12234869 | None:intergenic |
ACGCGCCGATGCAGCCGCGC+GGG | 0.456926 | 2_1:-12235122 | None:intergenic |
GTCCGAGCTCGTTTCTTCCC+TGG | 0.460470 | 2_1:-12235097 | None:intergenic |
GGGTTAGAGTTTGGAAGAGG+AGG | 0.464452 | 2_1:-12234950 | None:intergenic |
GCCGGATCATGAAGAAGAAC+CGG | 0.466001 | 2_1:+12236001 | Msa0195390:CDS |
GATGCTTTGTTAGAAGATAA+CGG | 0.467392 | 2_1:+12235070 | Msa0195390:CDS |
AGGACGACCATGTTTATTTG+TGG | 0.468432 | 2_1:+12241658 | Msa0195390:three_prime_UTR |
TCAGGGTTAGAGTTTGGAAG+AGG | 0.468601 | 2_1:-12234953 | None:intergenic |
ATATATCCCTCTAGCTCTAC+AGG | 0.469152 | 2_1:-12236489 | None:intergenic |
AGTTGGCAGTATCCATTAGA+AGG | 0.469741 | 2_1:+12241525 | Msa0195390:CDS |
TGTGATGGAGAACTAGGAAT+AGG | 0.470974 | 2_1:+12235537 | Msa0195390:CDS |
GTTTAGAGCAGATGCAGAGT+TGG | 0.473139 | 2_1:+12241286 | Msa0195390:CDS |
CAGACCGAAATTGTTTAGAA+AGG | 0.476881 | 2_1:-12240220 | None:intergenic |
TTAGAAGATAACGGTTTACC+AGG | 0.484755 | 2_1:+12235079 | Msa0195390:CDS |
GCTGTCACCGTTAATATTCT+GGG | 0.485620 | 2_1:-12236051 | None:intergenic |
ATGCTAGAGATGCTATTTGT+CGG | 0.486858 | 2_1:+12240537 | Msa0195390:CDS |
TGTTGGATGTTTGGCGGAGA+AGG | 0.489529 | 2_1:-12234740 | None:intergenic |
TGTGTATCTATCTTTCATCA+TGG | 0.489539 | 2_1:+12241491 | Msa0195390:CDS |
CCTGGGGCCTGCATTTATTG+AGG | 0.489676 | 2_1:+12239286 | Msa0195390:CDS |
TCATATTGAGGAAAATCTCC+TGG | 0.489818 | 2_1:+12239268 | Msa0195390:CDS |
AATTGGAGCGGCATAATACT+AGG | 0.491494 | 2_1:+12235436 | Msa0195390:CDS |
AGGCTATCATCGACGGCATA+GGG | 0.494022 | 2_1:+12235186 | Msa0195390:CDS |
GTTGACGAACCATTAACAAC+CGG | 0.496044 | 2_1:-12236020 | None:intergenic |
CGAAGTCGAGGAGGTAAGAT+AGG | 0.500096 | 2_1:-12234907 | None:intergenic |
AAGGCTATCATCGACGGCAT+AGG | 0.500460 | 2_1:+12235185 | Msa0195390:CDS |
ATCACTTGTTGTTTGTCTTG+TGG | 0.502076 | 2_1:+12241466 | Msa0195390:CDS |
CTTTATTCCTGTACTTATTG+GGG | 0.502295 | 2_1:+12240142 | Msa0195390:CDS |
CATCCCACATGCTTTGAAGC+AGG | 0.502812 | 2_1:+12237323 | Msa0195390:CDS |
TTTGCAGATATTCCAATGGT+TGG | 0.503021 | 2_1:+12236458 | Msa0195390:intron |
GAAAGTTGTTGGATGTTTGG+CGG | 0.503320 | 2_1:-12234746 | None:intergenic |
TCTTTATCCCCAATAAGTAC+AGG | 0.504320 | 2_1:-12240149 | None:intergenic |
CAGGCATACTTGCCAACCAT+TGG | 0.506762 | 2_1:-12236470 | None:intergenic |
TATCTATCTTTCATCATGGG+AGG | 0.507164 | 2_1:+12241495 | Msa0195390:CDS |
TTGTCTTCAGCCGAGTTATG+TGG | 0.515481 | 2_1:-12239200 | None:intergenic |
TCATGGGAGGGTTAACGAGT+TGG | 0.515866 | 2_1:+12241508 | Msa0195390:CDS |
TACACATGCCCTTCAGCAGT+TGG | 0.521989 | 2_1:-12240514 | None:intergenic |
AGGTACGATACGGTGGTGGA+TGG | 0.522499 | 2_1:-12234720 | None:intergenic |
TCCAATTGTGATGGAGAACT+AGG | 0.524696 | 2_1:+12235531 | Msa0195390:CDS |
AGTTGTTGAAGATAACAGTC+AGG | 0.525980 | 2_1:+12240640 | Msa0195390:CDS |
AGCCTTCTTGGAAATTCCGC+AGG | 0.535663 | 2_1:-12236328 | None:intergenic |
TCTTCGGGAGGGTCCATTGG+AGG | 0.536545 | 2_1:-12234866 | None:intergenic |
CGGATTTCGATGAAGGGAAA+CGG | 0.538156 | 2_1:+12235400 | Msa0195390:CDS |
CTAGAGGGATATATCCGCCC+TGG | 0.540836 | 2_1:+12236498 | Msa0195390:CDS |
TAATACTAGGAGGAGGAGAA+AGG | 0.540952 | 2_1:+12235449 | Msa0195390:CDS |
ATGATCTTCCGTGTAATGAA+AGG | 0.541427 | 2_1:+12237052 | Msa0195390:CDS |
AGATCACGCACATAATACAT+AGG | 0.541842 | 2_1:-12236971 | None:intergenic |
GACGGCATAGGGTTTGTTTG+CGG | 0.543698 | 2_1:+12235197 | Msa0195390:CDS |
GTGTATCTATCTTTCATCAT+GGG | 0.544893 | 2_1:+12241492 | Msa0195390:CDS |
ATAACTACCTCAATAAATGC+AGG | 0.551106 | 2_1:-12239293 | None:intergenic |
GTGACCGTCAAAATCTTACC+AGG | 0.551898 | 2_1:+12241405 | Msa0195390:CDS |
CATATTGAGGAAAATCTCCT+GGG | 0.554987 | 2_1:+12239269 | Msa0195390:CDS |
CTCTTATTGTCACAATATGA+AGG | 0.557692 | 2_1:-12236146 | None:intergenic |
CCAATCAATTCTCCCTCCAA+TGG | 0.558465 | 2_1:+12234853 | Msa0195390:CDS |
CCTCAATAAATGCAGGCCCC+AGG | 0.559939 | 2_1:-12239286 | None:intergenic |
AAAAGTCGAGGCAAACATGC+AGG | 0.562694 | 2_1:+12237280 | Msa0195390:CDS |
TGAAGGCGACTTAGAAGGAT+CGG | 0.563449 | 2_1:-12236129 | None:intergenic |
CAATATAAGTGATGTTGACA+TGG | 0.564749 | 2_1:+12240490 | Msa0195390:CDS |
GATATGTGTCCCTCATATTG+AGG | 0.564934 | 2_1:+12239256 | Msa0195390:CDS |
AAAATTACATACCGAAACTT+GGG | 0.567163 | 2_1:-12237389 | None:intergenic |
AGAAAGATGCTATCTGGAAG+AGG | 0.569804 | 2_1:+12237004 | Msa0195390:CDS |
AGCTTAAAGGCTATCATCGA+CGG | 0.570632 | 2_1:+12235179 | Msa0195390:CDS |
AATGATGATTCCAATTGTGA+TGG | 0.570689 | 2_1:+12235522 | Msa0195390:CDS |
CTTCGGGAGGGTCCATTGGA+GGG | 0.571070 | 2_1:-12234865 | None:intergenic |
AAGGCTGTAGATTCTGCAGT+AGG | 0.571229 | 2_1:+12235468 | Msa0195390:CDS |
GGTACGATACGGTGGTGGAT+GGG | 0.571935 | 2_1:-12234719 | None:intergenic |
GCTATTTGTCGGAAAGGTGG+AGG | 0.572191 | 2_1:+12240548 | Msa0195390:CDS |
TTTCCTGCTTCAAAGCATGT+GGG | 0.574026 | 2_1:-12237326 | None:intergenic |
TACTTGACCCGCGAGAAAGT+TGG | 0.574402 | 2_1:-12235026 | None:intergenic |
AGAGATGCTATTTGTCGGAA+AGG | 0.576533 | 2_1:+12240542 | Msa0195390:CDS |
ATCTATCTTTCATCATGGGA+GGG | 0.580834 | 2_1:+12241496 | Msa0195390:CDS |
ACTTGCTCCAACTTTCTCGC+GGG | 0.581441 | 2_1:+12235019 | Msa0195390:CDS |
GAATATCGTCGTCGAAGTCG+AGG | 0.582065 | 2_1:-12234919 | None:intergenic |
TGTTTCAGCAGAAGCAACAA+AGG | 0.585054 | 2_1:-12236081 | None:intergenic |
CGTTCCGTCTCCACATAACT+CGG | 0.585530 | 2_1:+12239190 | Msa0195390:CDS |
TCGAGTTCGGGGCATGCACA+TGG | 0.586136 | 2_1:-12235049 | None:intergenic |
AACGCGCCGATGCAGCCGCG+CGG | 0.589818 | 2_1:-12235123 | None:intergenic |
AGTTGGAGCAAGTTAACCTC+GGG | 0.590174 | 2_1:-12235009 | None:intergenic |
GAGGTAAGATAGGTCCCAAA+CGG | 0.591191 | 2_1:-12234897 | None:intergenic |
ACTTGCTTGTAGATATAGCA+TGG | 0.593375 | 2_1:+12240306 | Msa0195390:CDS |
AACTTGCTCCAACTTTCTCG+CGG | 0.593749 | 2_1:+12235018 | Msa0195390:CDS |
GGTTAGAGTTTGGAAGAGGA+GGG | 0.593911 | 2_1:-12234949 | None:intergenic |
CGGAATTTCCAAGAAGGCTG+CGG | 0.598319 | 2_1:+12236332 | Msa0195390:CDS |
GATGCTATTTGTCGGAAAGG+TGG | 0.601141 | 2_1:+12240545 | Msa0195390:CDS |
AAGTATGCCTGTAGAGCTAG+AGG | 0.601194 | 2_1:+12236482 | Msa0195390:CDS |
CGTAAAGCTTAAAAGAAACC+CGG | 0.601561 | 2_1:-12236297 | None:intergenic |
GATCACGCACATAATACATA+GGG | 0.602014 | 2_1:-12236970 | None:intergenic |
TGACATGGACCAACTGCTGA+AGG | 0.605178 | 2_1:+12240505 | Msa0195390:CDS |
GAGAAGGTACGATACGGTGG+TGG | 0.609125 | 2_1:-12234724 | None:intergenic |
AGAGATACTGTCAACAGTGT+GGG | 0.614903 | 2_1:+12235260 | Msa0195390:CDS |
TCGAGATCTCAAGAATCCCC+TGG | 0.617392 | 2_1:-12241423 | None:intergenic |
CTTTGAAGCAGGAAAACCCA+TGG | 0.618843 | 2_1:+12237334 | Msa0195390:CDS |
CGGAGGAGAGATCTTCGGGA+GGG | 0.624318 | 2_1:-12234877 | None:intergenic |
TAGAGGGATATATCCGCCCT+GGG | 0.627129 | 2_1:+12236499 | Msa0195390:CDS |
AGCGGCATAATACTAGGAGG+AGG | 0.628758 | 2_1:+12235442 | Msa0195390:CDS |
ATCGTCAGGATCGTACACCC+AGG | 0.629008 | 2_1:-12236516 | None:intergenic |
TACCAGGGAAGAAACGAGCT+CGG | 0.630387 | 2_1:+12235095 | Msa0195390:CDS |
AGGCAAACATGCAGGCACCT+AGG | 0.631524 | 2_1:+12237288 | Msa0195390:CDS |
CTGATCCAGACGAAAACGAT+AGG | 0.631786 | 2_1:+12234972 | Msa0195390:CDS |
AAGTTGGAGCAAGTTAACCT+CGG | 0.643009 | 2_1:-12235010 | None:intergenic |
GGATGAATATAGTGAAGCCT+AGG | 0.643635 | 2_1:-12237305 | None:intergenic |
ATCCTGCGGAATTTCCAAGA+AGG | 0.645595 | 2_1:+12236326 | Msa0195390:CDS |
ACGAGCTCGGACTGCCCGCG+CGG | 0.648729 | 2_1:+12235108 | Msa0195390:CDS |
TCAGCCGAGTTATGTGGAGA+CGG | 0.653109 | 2_1:-12239194 | None:intergenic |
GGTATAATTAGCATGCTGCA+AGG | 0.653848 | 2_1:+12241748 | Msa0195390:three_prime_UTR |
TTGGCGGAGAAGGTACGATA+CGG | 0.656274 | 2_1:-12234730 | None:intergenic |
TCGTCAGGATCGTACACCCA+GGG | 0.658661 | 2_1:-12236515 | None:intergenic |
GCTTTACGACTGGAATCCTG+CGG | 0.658919 | 2_1:+12236312 | Msa0195390:CDS |
ATCATTCAGATGAATTAGAG+CGG | 0.660105 | 2_1:-12237029 | None:intergenic |
CTTGTGGAAGTAACTTGCTG+CGG | 0.661577 | 2_1:+12237366 | Msa0195390:CDS |
CTAACAAAGCATCGAGTTCG+GGG | 0.661782 | 2_1:-12235060 | None:intergenic |
GTAAGATAGGTCCCAAACGG+AGG | 0.663374 | 2_1:-12234894 | None:intergenic |
GGATCCGAAAGCGTGACCCG+AGG | 0.668770 | 2_1:+12234993 | Msa0195390:CDS |
GAAATATCAACTTCACAACC+AGG | 0.671070 | 2_1:-12235154 | None:intergenic |
AATTTCTGTGACAAAAGTCG+AGG | 0.673573 | 2_1:+12237268 | Msa0195390:CDS |
GAAACAAACCTTTCATTACA+CGG | 0.677907 | 2_1:-12237060 | None:intergenic |
TATCGTCGTCGAAGTCGAGG+AGG | 0.681010 | 2_1:-12234916 | None:intergenic |
AAGAGATACTGTCAACAGTG+TGG | 0.681163 | 2_1:+12235259 | Msa0195390:CDS |
TTAAAATCCACAAATAAACA+TGG | 0.681347 | 2_1:-12241665 | None:intergenic |
GACATGGACCAACTGCTGAA+GGG | 0.681962 | 2_1:+12240506 | Msa0195390:CDS |
GCGGAGAAGGTACGATACGG+TGG | 0.683203 | 2_1:-12234727 | None:intergenic |
GTTGTAGAAGGAAATTGGAG+CGG | 0.686927 | 2_1:+12235424 | Msa0195390:CDS |
ACGGAGGAGAGATCTTCGGG+AGG | 0.691526 | 2_1:-12234878 | None:intergenic |
TGACCGTCAAAATCTTACCA+GGG | 0.692658 | 2_1:+12241406 | Msa0195390:CDS |
TAGAAGATAACGGTTTACCA+GGG | 0.694372 | 2_1:+12235080 | Msa0195390:CDS |
GACCGTCAAAATCTTACCAG+GGG | 0.695671 | 2_1:+12241407 | Msa0195390:CDS |
TGGAGCGGCATAATACTAGG+AGG | 0.705490 | 2_1:+12235439 | Msa0195390:CDS |
AGTATGCCTGTAGAGCTAGA+GGG | 0.705762 | 2_1:+12236483 | Msa0195390:CDS |
ATATTGAGGAAAATCTCCTG+GGG | 0.711856 | 2_1:+12239270 | Msa0195390:CDS |
TCAGGATCGTACACCCAGGG+CGG | 0.738843 | 2_1:-12236512 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAAATTTAAGAGTAATTT+TGG | + | chr2_1:12238116-12238135 | Msa0195390:intron | 10.0% |
!! | TAATACGATATTTATTATAA+AGG | + | chr2_1:12238734-12238753 | Msa0195390:intron | 10.0% |
!! | AAATTTAATCAATTTAATCA+AGG | - | chr2_1:12240007-12240026 | None:intergenic | 10.0% |
!!! | TTTGTTTTTTCATTTTTCTA+CGG | - | chr2_1:12234690-12234709 | None:intergenic | 15.0% |
!!! | ATAAAATGCTTTAAAATACT+TGG | - | chr2_1:12236360-12236379 | None:intergenic | 15.0% |
!!! | ATTTGTATACTTCTTATTTT+TGG | + | chr2_1:12237089-12237108 | Msa0195390:intron | 15.0% |
!! | AAAAACAACTCAAATAATTT+AGG | - | chr2_1:12237126-12237145 | None:intergenic | 15.0% |
!! | CTATAACTAAAAATAACAAA+AGG | - | chr2_1:12237181-12237200 | None:intergenic | 15.0% |
!!! | CTTTTGTTATTTTTAGTTAT+AGG | + | chr2_1:12237179-12237198 | Msa0195390:intron | 15.0% |
!!! | TTTTGTTTTTATATTTAAGG+TGG | - | chr2_1:12237845-12237864 | None:intergenic | 15.0% |
!! | ACCTTAAATATAAAAACAAA+AGG | + | chr2_1:12237844-12237863 | Msa0195390:intron | 15.0% |
!!! | TCCTTTTGTTTTTATATTTA+AGG | - | chr2_1:12237848-12237867 | None:intergenic | 15.0% |
!! | AAATATAAAAACAAAAGGAA+TGG | + | chr2_1:12237849-12237868 | Msa0195390:intron | 15.0% |
!! | ATTAAGAAAATTGGTTAATT+TGG | - | chr2_1:12238181-12238200 | None:intergenic | 15.0% |
!! | TTTAAACAGATTAAGAAAAT+TGG | - | chr2_1:12238190-12238209 | None:intergenic | 15.0% |
!! | AATCTGTTTAAATTTATCAA+AGG | + | chr2_1:12238198-12238217 | Msa0195390:intron | 15.0% |
!! | ATCTGTTTAAATTTATCAAA+GGG | + | chr2_1:12238199-12238218 | Msa0195390:intron | 15.0% |
!! | AATACACTTCATAAATTAAT+TGG | - | chr2_1:12238267-12238286 | None:intergenic | 15.0% |
!! | ATAAAATATATAGTACCTAA+GGG | - | chr2_1:12238346-12238365 | None:intergenic | 15.0% |
!! | AATAAAATATATAGTACCTA+AGG | - | chr2_1:12238347-12238366 | None:intergenic | 15.0% |
!!! | TTAGGTACTATATATTTTAT+TGG | + | chr2_1:12238346-12238365 | Msa0195390:intron | 15.0% |
!!! | TAGGTACTATATATTTTATT+GGG | + | chr2_1:12238347-12238366 | Msa0195390:intron | 15.0% |
!!! | AAATATGATACTTTCTTTTT+TGG | - | chr2_1:12239054-12239073 | None:intergenic | 15.0% |
!! | CAAATTAAACTAAATACTTA+AGG | - | chr2_1:12239572-12239591 | None:intergenic | 15.0% |
!!! | CTTAAGTATTTAGTTTAATT+TGG | + | chr2_1:12239570-12239589 | Msa0195390:intron | 15.0% |
!!! | ATAAACTGTTTTTATCAAAA+TGG | + | chr2_1:12240032-12240051 | Msa0195390:intron | 15.0% |
!! | TTAATTAATGACATTATCAT+GGG | - | chr2_1:12240694-12240713 | None:intergenic | 15.0% |
!! | ATTAATTAATGACATTATCA+TGG | - | chr2_1:12240695-12240714 | None:intergenic | 15.0% |
!! | AAAGGATATTATAATGAATA+TGG | + | chr2_1:12241364-12241383 | Msa0195390:CDS | 15.0% |
!! | AATATTGAAAAATTTGTCAA+TGG | - | chr2_1:12241562-12241581 | None:intergenic | 15.0% |
!!! | TAATACATTTTGTTCATTTT+TGG | + | chr2_1:12241785-12241804 | Msa0195390:three_prime_UTR | 15.0% |
!!! | ATGTAGATTTCATGTTTTAT+CGG | + | chr2_1:12235380-12235399 | Msa0195390:intron | 20.0% |
!!! | ATTCTAATTTAATTTCCATG+TGG | + | chr2_1:12235908-12235927 | Msa0195390:intron | 20.0% |
!! | ACATTTATCCACATAATATT+TGG | - | chr2_1:12236555-12236574 | None:intergenic | 20.0% |
!! | AAACTAAATACTTGAAAACA+GGG | - | chr2_1:12236858-12236877 | None:intergenic | 20.0% |
!! | AAAACTAAATACTTGAAAAC+AGG | - | chr2_1:12236859-12236878 | None:intergenic | 20.0% |
!!! | TAAGAAGTATACAAATGAAA+CGG | - | chr2_1:12237085-12237104 | None:intergenic | 20.0% |
!!! | AATTATTTGAGTTGTTTTTC+TGG | + | chr2_1:12237127-12237146 | Msa0195390:intron | 20.0% |
!!! | TATATTTCATTGATTACAGA+TGG | + | chr2_1:12237245-12237264 | Msa0195390:intron | 20.0% |
!!! | TGAACATAGTTAATTTGTAT+CGG | - | chr2_1:12238062-12238081 | None:intergenic | 20.0% |
!!! | AGGTACTATATATTTTATTG+GGG | + | chr2_1:12238348-12238367 | Msa0195390:intron | 20.0% |
!! | CATATAAAACTTCAAGTAAA+AGG | + | chr2_1:12238512-12238531 | Msa0195390:intron | 20.0% |
!!! | CGTAGCTATATATTTTATTT+AGG | + | chr2_1:12238581-12238600 | Msa0195390:intron | 20.0% |
!! | CTATCATTATGATATGATAT+GGG | - | chr2_1:12238634-12238653 | None:intergenic | 20.0% |
!! | CCAAAAAAGATTATAACAAA+AGG | - | chr2_1:12238676-12238695 | None:intergenic | 20.0% |
!!! | CCTTTTGTTATAATCTTTTT+TGG | + | chr2_1:12238673-12238692 | Msa0195390:intron | 20.0% |
!! | AAAAGAAAACATACAAGTAT+TGG | - | chr2_1:12239415-12239434 | None:intergenic | 20.0% |
!! | CTAAAAAATCAAACAAATTG+AGG | + | chr2_1:12239508-12239527 | Msa0195390:intron | 20.0% |
!! | GGATTTGTATTATAAAATTG+TGG | + | chr2_1:12239852-12239871 | Msa0195390:intron | 20.0% |
!! | TGTATTATAAAATTGTGGTT+TGG | + | chr2_1:12239857-12239876 | Msa0195390:intron | 20.0% |
!! | AAACAAAGAAAAATATGAAG+TGG | - | chr2_1:12240071-12240090 | None:intergenic | 20.0% |
!!! | AATGATTCAACTATCATTTT+GGG | + | chr2_1:12240422-12240441 | Msa0195390:CDS | 20.0% |
!!! | TTTGTTATGCTTATCAAATT+TGG | - | chr2_1:12240458-12240477 | None:intergenic | 20.0% |
!! | ACAAAAAAAATAACGAATTG+AGG | - | chr2_1:12240989-12241008 | None:intergenic | 20.0% |
!!! | TATCTTCTGATTTTTTTCAT+CGG | - | chr2_1:12241333-12241352 | None:intergenic | 20.0% |
!!! | ATAATATCCTTTTTCAAAAG+CGG | - | chr2_1:12241356-12241375 | None:intergenic | 20.0% |
!!! | ATTTTTGTACTTATTGTGTT+TGG | + | chr2_1:12241579-12241598 | Msa0195390:three_prime_UTR | 20.0% |
!! | CTAAATAAATAGATGTCATT+AGG | + | chr2_1:12241620-12241639 | Msa0195390:three_prime_UTR | 20.0% |
!! | TTAAAATCCACAAATAAACA+TGG | - | chr2_1:12241668-12241687 | None:intergenic | 20.0% |
!!! | TAATTATGAACCCAATTTTA+TGG | + | chr2_1:12241719-12241738 | Msa0195390:three_prime_UTR | 20.0% |
!!! | AATTATGAACCCAATTTTAT+GGG | + | chr2_1:12241720-12241739 | Msa0195390:three_prime_UTR | 20.0% |
!!! | TTTTTCATTTTTCTACGGTA+GGG | - | chr2_1:12234685-12234704 | None:intergenic | 25.0% |
!!! | TTTTTTCATTTTTCTACGGT+AGG | - | chr2_1:12234686-12234705 | None:intergenic | 25.0% |
!!! | GCTTTTTTCATAATCTCAAA+TGG | + | chr2_1:12234802-12234821 | Msa0195390:exon | 25.0% |
!! | TTTATGATGATGATGTTGAT+TGG | + | chr2_1:12235340-12235359 | Msa0195390:intron | 25.0% |
!! | TTATGATGATGATGTTGATT+GGG | + | chr2_1:12235341-12235360 | Msa0195390:intron | 25.0% |
!! | AGTATCACACTCTTATTTAT+TGG | + | chr2_1:12235583-12235602 | Msa0195390:intron | 25.0% |
! | ACAAGACAAATAAAGTCAAA+CGG | - | chr2_1:12235750-12235769 | None:intergenic | 25.0% |
!!! | TTCTTTCACGTGTTTATTTT+TGG | + | chr2_1:12236216-12236235 | Msa0195390:intron | 25.0% |
! | AAGAATGCTTTCTTATTACA+CGG | + | chr2_1:12236642-12236661 | Msa0195390:intron | 25.0% |
!! | TAGTTTTTACTGAATCTGAT+TGG | + | chr2_1:12236872-12236891 | Msa0195390:intron | 25.0% |
! | AGAAAGAGGAAGAAAAAATA+TGG | - | chr2_1:12236899-12236918 | None:intergenic | 25.0% |
! | AAAATTACATACCGAAACTT+GGG | - | chr2_1:12237392-12237411 | None:intergenic | 25.0% |
! | CTTTAAATGATGTTTAGAAG+AGG | - | chr2_1:12237417-12237436 | None:intergenic | 25.0% |
! | CAAATAAATATGCTTATGTC+TGG | - | chr2_1:12237462-12237481 | None:intergenic | 25.0% |
! | ATAATATATTTGCCAGTGTT+GGG | + | chr2_1:12237492-12237511 | Msa0195390:intron | 25.0% |
!! | AAAATACACTTAGGTTGTAA+GGG | + | chr2_1:12237530-12237549 | Msa0195390:intron | 25.0% |
! | TGGAAAATCATAGTTAAACA+TGG | - | chr2_1:12237719-12237738 | None:intergenic | 25.0% |
! | TATAAAAACAAAAGGAATGG+AGG | + | chr2_1:12237852-12237871 | Msa0195390:intron | 25.0% |
! | ATAAAAACAAAAGGAATGGA+GGG | + | chr2_1:12237853-12237872 | Msa0195390:intron | 25.0% |
!! | AGTTAGAATTGTTTTCAGAA+GGG | - | chr2_1:12237946-12237965 | None:intergenic | 25.0% |
!! | AAGTTAGAATTGTTTTCAGA+AGG | - | chr2_1:12237947-12237966 | None:intergenic | 25.0% |
!!! | AAATTGGTTAATTTGGTTTG+CGG | - | chr2_1:12238174-12238193 | None:intergenic | 25.0% |
! | CATTACTTGAACTAAATACT+AGG | + | chr2_1:12238381-12238400 | Msa0195390:intron | 25.0% |
! | GCTATCATTATGATATGATA+TGG | - | chr2_1:12238635-12238654 | None:intergenic | 25.0% |
! | ATCATATCATAATGATAGCA+CGG | + | chr2_1:12238636-12238655 | Msa0195390:intron | 25.0% |
!! | ACTCTGATCTTAGTAAATTT+TGG | + | chr2_1:12238700-12238719 | Msa0195390:intron | 25.0% |
!! | CTCTGATCTTAGTAAATTTT+GGG | + | chr2_1:12238701-12238720 | Msa0195390:intron | 25.0% |
!!! | TTTTTTGAATAAGCCAAACT+AGG | - | chr2_1:12238860-12238879 | None:intergenic | 25.0% |
!!! | TATTCAGCTAGTTTAGATTT+TGG | + | chr2_1:12239073-12239092 | Msa0195390:intron | 25.0% |
! | GAATGAACTGTTAAATTATC+AGG | - | chr2_1:12239489-12239508 | None:intergenic | 25.0% |
!!! | ATTTTGCACTGATATCTTAT+TGG | + | chr2_1:12239733-12239752 | Msa0195390:intron | 25.0% |
! | CCAAAATCACATCAAATAAA+AGG | - | chr2_1:12239971-12239990 | None:intergenic | 25.0% |
!!! | CCTTTTATTTGATGTGATTT+TGG | + | chr2_1:12239968-12239987 | Msa0195390:intron | 25.0% |
!! | TTTATTTGATGTGATTTTGG+AGG | + | chr2_1:12239971-12239990 | Msa0195390:intron | 25.0% |
! | AACTTTATTCCTGTACTTAT+TGG | + | chr2_1:12240140-12240159 | Msa0195390:CDS | 25.0% |
! | ACTTTATTCCTGTACTTATT+GGG | + | chr2_1:12240141-12240160 | Msa0195390:CDS | 25.0% |
!! | TTCAGAAATTTTTGACAGAA+TGG | + | chr2_1:12240346-12240365 | Msa0195390:CDS | 25.0% |
!!! | TCAAAGATATTGCTATTTGT+TGG | + | chr2_1:12240385-12240404 | Msa0195390:CDS | 25.0% |
!! | CAATGATTCAACTATCATTT+TGG | + | chr2_1:12240421-12240440 | Msa0195390:CDS | 25.0% |
!!! | TATAGTTTTGAACTCCAAAA+TGG | + | chr2_1:12240571-12240590 | Msa0195390:CDS | 25.0% |
! | AATCGAAAATAAAACCTAGT+GGG | + | chr2_1:12240779-12240798 | Msa0195390:intron | 25.0% |
! | ATGTCAACTATAGATATGTA+AGG | + | chr2_1:12240812-12240831 | Msa0195390:intron | 25.0% |
! | AAAAATAACGAATTGAGGAT+AGG | - | chr2_1:12240984-12241003 | None:intergenic | 25.0% |
! | AAAAATATATGTGGAAGGAA+TGG | - | chr2_1:12241025-12241044 | None:intergenic | 25.0% |
! | TCTTGAGCTAAAAATATATG+TGG | - | chr2_1:12241034-12241053 | None:intergenic | 25.0% |
!! | GGATTTTAAATTTAGATGTC+AGG | + | chr2_1:12241679-12241698 | Msa0195390:three_prime_UTR | 25.0% |
TTAGAAAGTTGTTGGATGTT+TGG | - | chr2_1:12234752-12234771 | None:intergenic | 30.0% | |
TTGAGATTATGAAAAAAGCG+CGG | - | chr2_1:12234801-12234820 | None:intergenic | 30.0% | |
! | GATGCTTTGTTAGAAGATAA+CGG | + | chr2_1:12235070-12235089 | Msa0195390:CDS | 30.0% |
! | GTTGATATTTCTGAGCTTAA+AGG | + | chr2_1:12235166-12235185 | Msa0195390:CDS | 30.0% |
! | TATGATGATGATGTTGATTG+GGG | + | chr2_1:12235342-12235361 | Msa0195390:intron | 30.0% |
! | TTTTATCGGATTTCGATGAA+GGG | + | chr2_1:12235394-12235413 | Msa0195390:CDS | 30.0% |
AATGATGATTCCAATTGTGA+TGG | + | chr2_1:12235522-12235541 | Msa0195390:CDS | 30.0% | |
GCGTATAAAATGATGTTCAT+AGG | + | chr2_1:12235655-12235674 | Msa0195390:intron | 30.0% | |
AATAAACTGTTTGTGCAAAC+AGG | + | chr2_1:12235814-12235833 | Msa0195390:intron | 30.0% | |
ATAAACTGTTTGTGCAAACA+GGG | + | chr2_1:12235815-12235834 | Msa0195390:intron | 30.0% | |
! | TTAATTTCCATGTGGCTTTA+TGG | + | chr2_1:12235916-12235935 | Msa0195390:intron | 30.0% |
CTCTTATTGTCACAATATGA+AGG | - | chr2_1:12236149-12236168 | None:intergenic | 30.0% | |
TAAGAGTGATTATTCGTCTA+TGG | + | chr2_1:12236163-12236182 | Msa0195390:CDS | 30.0% | |
! | TTTCTTTTAAGCTTTACGAC+TGG | + | chr2_1:12236302-12236321 | Msa0195390:CDS | 30.0% |
ACAGTTTAGTATTTCGATTG+TGG | + | chr2_1:12236381-12236400 | Msa0195390:intron | 30.0% | |
!! | TGTTTTTGCAGATATTCCAA+TGG | + | chr2_1:12236454-12236473 | Msa0195390:intron | 30.0% |
TTGCAATGCCAAATATTATG+TGG | + | chr2_1:12236544-12236563 | Msa0195390:CDS | 30.0% | |
! | AAGCATTCTTTTTACCTAAC+AGG | - | chr2_1:12236632-12236651 | None:intergenic | 30.0% |
AGAATGCTTTCTTATTACAC+GGG | + | chr2_1:12236643-12236662 | Msa0195390:intron | 30.0% | |
GAACCATAAAGTCTAATACA+GGG | - | chr2_1:12236676-12236695 | None:intergenic | 30.0% | |
AGAACCATAAAGTCTAATAC+AGG | - | chr2_1:12236677-12236696 | None:intergenic | 30.0% | |
TGAAGTCAAAAATCAGAAAG+AGG | - | chr2_1:12236913-12236932 | None:intergenic | 30.0% | |
ATCATTCAGATGAATTAGAG+CGG | - | chr2_1:12237032-12237051 | None:intergenic | 30.0% | |
GAAACAAACCTTTCATTACA+CGG | - | chr2_1:12237063-12237082 | None:intergenic | 30.0% | |
GAAAATTACATACCGAAACT+TGG | - | chr2_1:12237393-12237412 | None:intergenic | 30.0% | |
CATAATATATTTGCCAGTGT+TGG | + | chr2_1:12237491-12237510 | Msa0195390:intron | 30.0% | |
TAATATATTTGCCAGTGTTG+GGG | + | chr2_1:12237493-12237512 | Msa0195390:intron | 30.0% | |
! | AGTGTATTTTCCCTTACATT+AGG | - | chr2_1:12237520-12237539 | None:intergenic | 30.0% |
ATGTAAGGGAAAATACACTT+AGG | + | chr2_1:12237521-12237540 | Msa0195390:intron | 30.0% | |
! | GAAAATACACTTAGGTTGTA+AGG | + | chr2_1:12237529-12237548 | Msa0195390:intron | 30.0% |
TGTTCGTATTATTCCTGAAA+TGG | + | chr2_1:12237639-12237658 | Msa0195390:intron | 30.0% | |
CACTGTAATATTTCCATTTC+AGG | - | chr2_1:12237655-12237674 | None:intergenic | 30.0% | |
CTGAAATGGAAATATTACAG+TGG | + | chr2_1:12237653-12237672 | Msa0195390:intron | 30.0% | |
AGAGAGAAATGAACTAACTA+CGG | - | chr2_1:12238001-12238020 | None:intergenic | 30.0% | |
!! | ACATAGTTAATTTGTATCGG+TGG | - | chr2_1:12238059-12238078 | None:intergenic | 30.0% |
! | ATCAAAGGGTCTTATATACA+AGG | + | chr2_1:12238213-12238232 | Msa0195390:intron | 30.0% |
ACTTATTGACATGTTACCTT+AGG | - | chr2_1:12238320-12238339 | None:intergenic | 30.0% | |
ATGTCAATAAGTATACCCTT+AGG | + | chr2_1:12238328-12238347 | Msa0195390:intron | 30.0% | |
! | TTATAAAGGCATAAACCACT+TGG | + | chr2_1:12238748-12238767 | Msa0195390:intron | 30.0% |
! | TATAAAGGCATAAACCACTT+GGG | + | chr2_1:12238749-12238768 | Msa0195390:intron | 30.0% |
!!! | CTTTCTTTTTTGGTGTACAA+CGG | - | chr2_1:12239044-12239063 | None:intergenic | 30.0% |
! | AGGCTTCTTGTATCTTTTTA+TGG | + | chr2_1:12239143-12239162 | Msa0195390:intron | 30.0% |
ATAACTACCTCAATAAATGC+AGG | - | chr2_1:12239296-12239315 | None:intergenic | 30.0% | |
AAACAGGAAATTAGAAATGG+AGG | - | chr2_1:12239350-12239369 | None:intergenic | 30.0% | |
AGCAAACAGGAAATTAGAAA+TGG | - | chr2_1:12239353-12239372 | None:intergenic | 30.0% | |
TGATATGAAACATAGCAAAC+AGG | - | chr2_1:12239366-12239385 | None:intergenic | 30.0% | |
TGTTAAATTATCAGGTCATG+CGG | - | chr2_1:12239481-12239500 | None:intergenic | 30.0% | |
AGGAACACTGAAACTTTAAT+GGG | + | chr2_1:12239528-12239547 | Msa0195390:intron | 30.0% | |
TACGAGGATATGCTAAAATT+TGG | - | chr2_1:12239693-12239712 | None:intergenic | 30.0% | |
AACCTGTTATCTTAAGCAAA+TGG | + | chr2_1:12239768-12239787 | Msa0195390:intron | 30.0% | |
ACCTGTTATCTTAAGCAAAT+GGG | + | chr2_1:12239769-12239788 | Msa0195390:intron | 30.0% | |
AAGCAAATGGGATTTATCTA+AGG | + | chr2_1:12239781-12239800 | Msa0195390:intron | 30.0% | |
ATCATGGAAACTTTCGAATT+TGG | + | chr2_1:12239830-12239849 | Msa0195390:intron | 30.0% | |
TCATGGAAACTTTCGAATTT+GGG | + | chr2_1:12239831-12239850 | Msa0195390:intron | 30.0% | |
TCACATCAAATAAAAGGTTC+AGG | - | chr2_1:12239965-12239984 | None:intergenic | 30.0% | |
CTTTATTCCTGTACTTATTG+GGG | + | chr2_1:12240142-12240161 | Msa0195390:CDS | 30.0% | |
CTCTCCTTTCTAAACAATTT+CGG | + | chr2_1:12240216-12240235 | Msa0195390:CDS | 30.0% | |
!! | TGTCAAAAATTTCTGAAGTC+GGG | - | chr2_1:12240343-12240362 | None:intergenic | 30.0% |
!! | CTGTCAAAAATTTCTGAAGT+CGG | - | chr2_1:12240344-12240363 | None:intergenic | 30.0% |
CATGTCAACATCACTTATAT+TGG | - | chr2_1:12240492-12240511 | None:intergenic | 30.0% | |
CAATATAAGTGATGTTGACA+TGG | + | chr2_1:12240490-12240509 | Msa0195390:CDS | 30.0% | |
ATCTTCAACAACTGATAACT+TGG | - | chr2_1:12240633-12240652 | None:intergenic | 30.0% | |
CAATCGAAAATAAAACCTAG+TGG | + | chr2_1:12240778-12240797 | Msa0195390:intron | 30.0% | |
CTATAGTTGACATAAATGCA+CGG | - | chr2_1:12240805-12240824 | None:intergenic | 30.0% | |
GAGCTAAAAATATATGTGGA+AGG | - | chr2_1:12241030-12241049 | None:intergenic | 30.0% | |
! | ACTATTGACTAAGTTTCTCT+CGG | + | chr2_1:12241065-12241084 | Msa0195390:intron | 30.0% |
TCATTTAGTAAACTCTGCTT+TGG | + | chr2_1:12241130-12241149 | Msa0195390:intron | 30.0% | |
!!! | TACATTGATTTTTGCTTTGC+AGG | + | chr2_1:12241256-12241275 | Msa0195390:intron | 30.0% |
!!! | ACATTGATTTTTGCTTTGCA+GGG | + | chr2_1:12241257-12241276 | Msa0195390:intron | 30.0% |
GATACAAGCACAAAAATAGT+TGG | - | chr2_1:12241449-12241468 | None:intergenic | 30.0% | |
TGTGTATCTATCTTTCATCA+TGG | + | chr2_1:12241491-12241510 | Msa0195390:CDS | 30.0% | |
GTGTATCTATCTTTCATCAT+GGG | + | chr2_1:12241492-12241511 | Msa0195390:CDS | 30.0% | |
TTAGGACAATAGATGTCATT+AGG | + | chr2_1:12241638-12241657 | Msa0195390:three_prime_UTR | 30.0% | |
GATGTCAGGTAAAAATCAAA+AGG | + | chr2_1:12241693-12241712 | Msa0195390:three_prime_UTR | 30.0% | |
TACCTTCAACCCATAAAATT+GGG | - | chr2_1:12241732-12241751 | None:intergenic | 30.0% | |
ATACCTTCAACCCATAAAAT+TGG | - | chr2_1:12241733-12241752 | None:intergenic | 30.0% | |
AATTGATTGGGATTGGGATT+GGG | - | chr2_1:12234843-12234862 | None:intergenic | 35.0% | |
!! | TTCTAACAAAGCATCGAGTT+CGG | - | chr2_1:12235065-12235084 | None:intergenic | 35.0% |
! | TTAGAAGATAACGGTTTACC+AGG | + | chr2_1:12235079-12235098 | Msa0195390:CDS | 35.0% |
! | TAGAAGATAACGGTTTACCA+GGG | + | chr2_1:12235080-12235099 | Msa0195390:CDS | 35.0% |
GAAATATCAACTTCACAACC+AGG | - | chr2_1:12235157-12235176 | None:intergenic | 35.0% | |
! | GTTTTATCGGATTTCGATGA+AGG | + | chr2_1:12235393-12235412 | Msa0195390:CDS | 35.0% |
! | TGTTTTCAGCTTATTTCCGT+CGG | + | chr2_1:12235679-12235698 | Msa0195390:intron | 35.0% |
!! | TATCGAAAAAAGAGTGTTGC+CGG | + | chr2_1:12235983-12236002 | Msa0195390:CDS | 35.0% |
AGTGATTATTCGTCTATGGT+AGG | + | chr2_1:12236167-12236186 | Msa0195390:intron | 35.0% | |
!!! | ATTTTTGGTGCGAGAAATTG+TGG | + | chr2_1:12236231-12236250 | Msa0195390:intron | 35.0% |
CGTAAAGCTTAAAAGAAACC+CGG | - | chr2_1:12236300-12236319 | None:intergenic | 35.0% | |
ATCAGTCACTAACATGTAGA+TGG | - | chr2_1:12236419-12236438 | None:intergenic | 35.0% | |
TTTGCAGATATTCCAATGGT+TGG | + | chr2_1:12236458-12236477 | Msa0195390:intron | 35.0% | |
GCATTGCAATAAAAATCGTC+AGG | - | chr2_1:12236533-12236552 | None:intergenic | 35.0% | |
! | CTTTGTTATGCTCATTCTCA+TGG | + | chr2_1:12236695-12236714 | Msa0195390:intron | 35.0% |
ACTTCATCTTGTCTCTCTTA+TGG | + | chr2_1:12236927-12236946 | Msa0195390:intron | 35.0% | |
GATCACGCACATAATACATA+GGG | - | chr2_1:12236973-12236992 | None:intergenic | 35.0% | |
AGATCACGCACATAATACAT+AGG | - | chr2_1:12236974-12236993 | None:intergenic | 35.0% | |
ATGATCTTCCGTGTAATGAA+AGG | + | chr2_1:12237052-12237071 | Msa0195390:CDS | 35.0% | |
!!! | AGCATTTTAGAACCTGATTC+AGG | + | chr2_1:12237153-12237172 | Msa0195390:intron | 35.0% |
TAACAAAAGGAACCTGAATC+AGG | - | chr2_1:12237168-12237187 | None:intergenic | 35.0% | |
! | TTATAGGCTTCAAGTTCTGA+GGG | + | chr2_1:12237195-12237214 | Msa0195390:intron | 35.0% |
AATTTCTGTGACAAAAGTCG+AGG | + | chr2_1:12237268-12237287 | Msa0195390:CDS | 35.0% | |
CTCTATTAATTGCCTTTGTG+TGG | - | chr2_1:12237597-12237616 | None:intergenic | 35.0% | |
!! | GTAGTAAGAGAAAGGTATCT+TGG | - | chr2_1:12237739-12237758 | None:intergenic | 35.0% |
TAGAGGGCTTCTAATATATG+GGG | - | chr2_1:12237768-12237787 | None:intergenic | 35.0% | |
GTAGAGGGCTTCTAATATAT+GGG | - | chr2_1:12237769-12237788 | None:intergenic | 35.0% | |
TTCAGAAGGGTCTCATATTT+AGG | - | chr2_1:12237933-12237952 | None:intergenic | 35.0% | |
TGAACTAACTACGGGTATTA+TGG | - | chr2_1:12237992-12238011 | None:intergenic | 35.0% | |
GAGAGAAATGAACTAACTAC+GGG | - | chr2_1:12238000-12238019 | None:intergenic | 35.0% | |
TTAACTCCAGATAGGACAAT+TGG | - | chr2_1:12238427-12238446 | None:intergenic | 35.0% | |
! | TAGGAATTGACCTTCCTTTT+AGG | + | chr2_1:12238600-12238619 | Msa0195390:intron | 35.0% |
TATGGGAATGCAAACCTAAA+AGG | - | chr2_1:12238617-12238636 | None:intergenic | 35.0% | |
ATAATGATAGCACGGTTTAG+TGG | + | chr2_1:12238644-12238663 | Msa0195390:intron | 35.0% | |
TAATGATAGCACGGTTTAGT+GGG | + | chr2_1:12238645-12238664 | Msa0195390:intron | 35.0% | |
TTTGTTGAAGCCACTAGAAT+TGG | + | chr2_1:12238963-12238982 | Msa0195390:intron | 35.0% | |
CTGTAATGAGGTGATAATCA+TGG | + | chr2_1:12239119-12239138 | Msa0195390:intron | 35.0% | |
! | GGAGATTTTCCTCAATATGA+GGG | - | chr2_1:12239268-12239287 | None:intergenic | 35.0% |
! | AGGAGATTTTCCTCAATATG+AGG | - | chr2_1:12239269-12239288 | None:intergenic | 35.0% |
TCATATTGAGGAAAATCTCC+TGG | + | chr2_1:12239268-12239287 | Msa0195390:CDS | 35.0% | |
CATATTGAGGAAAATCTCCT+GGG | + | chr2_1:12239269-12239288 | Msa0195390:CDS | 35.0% | |
ATATTGAGGAAAATCTCCTG+GGG | + | chr2_1:12239270-12239289 | Msa0195390:CDS | 35.0% | |
GAGGAACACTGAAACTTTAA+TGG | + | chr2_1:12239527-12239546 | Msa0195390:intron | 35.0% | |
!!! | TTTGGATGTGTCATTTTCGT+TGG | + | chr2_1:12239588-12239607 | Msa0195390:intron | 35.0% |
ATCAGTGCAAAATTCGATAC+CGG | - | chr2_1:12239726-12239745 | None:intergenic | 35.0% | |
TCCCATTTGCTTAAGATAAC+AGG | - | chr2_1:12239773-12239792 | None:intergenic | 35.0% | |
ACTAAGAGCTGTAGTTATCA+TGG | + | chr2_1:12239814-12239833 | Msa0195390:intron | 35.0% | |
CATACTTCTTTCCTTTCTGT+AGG | + | chr2_1:12240094-12240113 | Msa0195390:intron | 35.0% | |
TCTTTATCCCCAATAAGTAC+AGG | - | chr2_1:12240152-12240171 | None:intergenic | 35.0% | |
CAGACCGAAATTGTTTAGAA+AGG | - | chr2_1:12240223-12240242 | None:intergenic | 35.0% | |
ACTTGCTTGTAGATATAGCA+TGG | + | chr2_1:12240306-12240325 | Msa0195390:CDS | 35.0% | |
! | ATGCTAGAGATGCTATTTGT+CGG | + | chr2_1:12240537-12240556 | Msa0195390:CDS | 35.0% |
!! | GTTTTGAACTCCAAAATGGA+AGG | + | chr2_1:12240575-12240594 | Msa0195390:CDS | 35.0% |
! | AACTGATAACTTGGCGTTTT+GGG | - | chr2_1:12240624-12240643 | None:intergenic | 35.0% |
AGTTGTTGAAGATAACAGTC+AGG | + | chr2_1:12240640-12240659 | Msa0195390:CDS | 35.0% | |
GGCAATGTGAATGAAATTGT+TGG | + | chr2_1:12240862-12240881 | Msa0195390:intron | 35.0% | |
AGGAAGTAGTGTAACAAGTT+TGG | - | chr2_1:12240964-12240983 | None:intergenic | 35.0% | |
CTAAGTTTCTCTCGGAAAAA+TGG | + | chr2_1:12241073-12241092 | Msa0195390:intron | 35.0% | |
TGGAATTTCCATGGAAAAGA+TGG | + | chr2_1:12241174-12241193 | Msa0195390:intron | 35.0% | |
GTCAATCCAACTAGGATTTA+CGG | - | chr2_1:12241221-12241240 | None:intergenic | 35.0% | |
AGAAACATGTCAATCCAACT+AGG | - | chr2_1:12241229-12241248 | None:intergenic | 35.0% | |
!! | GAAGATACCGCTTTTGAAAA+AGG | + | chr2_1:12241346-12241365 | Msa0195390:CDS | 35.0% |
! | TTTTGACGGTCACATCTTTT+AGG | - | chr2_1:12241398-12241417 | None:intergenic | 35.0% |
!! | ATCACTTGTTGTTTGTCTTG+TGG | + | chr2_1:12241466-12241485 | Msa0195390:CDS | 35.0% |
TATCTATCTTTCATCATGGG+AGG | + | chr2_1:12241495-12241514 | Msa0195390:CDS | 35.0% | |
ATCTATCTTTCATCATGGGA+GGG | + | chr2_1:12241496-12241515 | Msa0195390:CDS | 35.0% | |
GTTGAACAAACACCTTCTAA+TGG | - | chr2_1:12241540-12241559 | None:intergenic | 35.0% | |
!! | AACCCAATTTTATGGGTTGA+AGG | + | chr2_1:12241727-12241746 | Msa0195390:three_prime_UTR | 35.0% |
GAAAGTTGTTGGATGTTTGG+CGG | - | chr2_1:12234749-12234768 | None:intergenic | 40.0% | |
!! | TTGGAATAAGCGCTTTTTGG+TGG | - | chr2_1:12234778-12234797 | None:intergenic | 40.0% |
! | GATTATGAAAAAAGCGCGGT+TGG | - | chr2_1:12234797-12234816 | None:intergenic | 40.0% |
GAATTGATTGGGATTGGGAT+TGG | - | chr2_1:12234844-12234863 | None:intergenic | 40.0% | |
AGGGAGAATTGATTGGGATT+GGG | - | chr2_1:12234849-12234868 | None:intergenic | 40.0% | |
CATTGGAGGGAGAATTGATT+GGG | - | chr2_1:12234855-12234874 | None:intergenic | 40.0% | |
! | TATCGTTTTCGTCTGGATCA+GGG | - | chr2_1:12234973-12234992 | None:intergenic | 40.0% |
AAGTTGGAGCAAGTTAACCT+CGG | - | chr2_1:12235013-12235032 | None:intergenic | 40.0% | |
!! | TCTAACAAAGCATCGAGTTC+GGG | - | chr2_1:12235064-12235083 | None:intergenic | 40.0% |
AGCTTAAAGGCTATCATCGA+CGG | + | chr2_1:12235179-12235198 | Msa0195390:CDS | 40.0% | |
GCTACTACTGTTGTTCTTGA+TGG | + | chr2_1:12235229-12235248 | Msa0195390:CDS | 40.0% | |
AAGAGATACTGTCAACAGTG+TGG | + | chr2_1:12235259-12235278 | Msa0195390:CDS | 40.0% | |
AGAGATACTGTCAACAGTGT+GGG | + | chr2_1:12235260-12235279 | Msa0195390:CDS | 40.0% | |
ACGGAGTTGTAGAAGGAAAT+TGG | + | chr2_1:12235419-12235438 | Msa0195390:CDS | 40.0% | |
GTTGTAGAAGGAAATTGGAG+CGG | + | chr2_1:12235424-12235443 | Msa0195390:CDS | 40.0% | |
AATTGGAGCGGCATAATACT+AGG | + | chr2_1:12235436-12235455 | Msa0195390:CDS | 40.0% | |
TAATACTAGGAGGAGGAGAA+AGG | + | chr2_1:12235449-12235468 | Msa0195390:CDS | 40.0% | |
! | TCCAATTGTGATGGAGAACT+AGG | + | chr2_1:12235531-12235550 | Msa0195390:CDS | 40.0% |
! | TCCTAGTTCTCCATCACAAT+TGG | - | chr2_1:12235535-12235554 | None:intergenic | 40.0% |
! | TGTGATGGAGAACTAGGAAT+AGG | + | chr2_1:12235537-12235556 | Msa0195390:CDS | 40.0% |
ATGGAGAACTAGGAATAGGT+TGG | + | chr2_1:12235541-12235560 | Msa0195390:intron | 40.0% | |
TTGTCAGTTGACAGAGTGAT+AGG | - | chr2_1:12235841-12235860 | None:intergenic | 40.0% | |
TCTGTCAACTGACAAGTCAA+TGG | + | chr2_1:12235846-12235865 | Msa0195390:intron | 40.0% | |
TACACATCCATAAAGCCACA+TGG | - | chr2_1:12235926-12235945 | None:intergenic | 40.0% | |
!! | TGTGGCTTTATGGATGTGTA+TGG | + | chr2_1:12235926-12235945 | Msa0195390:intron | 40.0% |
!! | GTGGCTTTATGGATGTGTAT+GGG | + | chr2_1:12235927-12235946 | Msa0195390:intron | 40.0% |
GAAGAAGAACCGGTTGTTAA+TGG | + | chr2_1:12236011-12236030 | Msa0195390:CDS | 40.0% | |
GTTGACGAACCATTAACAAC+CGG | - | chr2_1:12236023-12236042 | None:intergenic | 40.0% | |
CCAGAGACCCAGAATATTAA+CGG | + | chr2_1:12236044-12236063 | Msa0195390:CDS | 40.0% | |
GCTGTCACCGTTAATATTCT+GGG | - | chr2_1:12236054-12236073 | None:intergenic | 40.0% | |
TGTTTCAGCAGAAGCAACAA+AGG | - | chr2_1:12236084-12236103 | None:intergenic | 40.0% | |
GCTGAAACACAAGCGAATAT+TGG | + | chr2_1:12236095-12236114 | Msa0195390:CDS | 40.0% | |
CAATATGAAGGCGACTTAGA+AGG | - | chr2_1:12236137-12236156 | None:intergenic | 40.0% | |
!! | ATATATCCCTCTAGCTCTAC+AGG | - | chr2_1:12236492-12236511 | None:intergenic | 40.0% |
CCTAACAGGCACTTAAGATA+TGG | - | chr2_1:12236618-12236637 | None:intergenic | 40.0% | |
CCATATCTTAAGTGCCTGTT+AGG | + | chr2_1:12236615-12236634 | Msa0195390:intron | 40.0% | |
GTGCCCTGTATTAGACTTTA+TGG | + | chr2_1:12236670-12236689 | Msa0195390:intron | 40.0% | |
CCTGATTCATTACAGAGAGA+GGG | - | chr2_1:12236801-12236820 | None:intergenic | 40.0% | |
TCCTGATTCATTACAGAGAG+AGG | - | chr2_1:12236802-12236821 | None:intergenic | 40.0% | |
ACATAGGGTCTTTGAGTAAC+TGG | - | chr2_1:12236958-12236977 | None:intergenic | 40.0% | |
CTTCCAGATAGCATCTTTCT+GGG | - | chr2_1:12237004-12237023 | None:intergenic | 40.0% | |
TCTTCCAGATAGCATCTTTC+TGG | - | chr2_1:12237005-12237024 | None:intergenic | 40.0% | |
AGAAAGATGCTATCTGGAAG+AGG | + | chr2_1:12237004-12237023 | Msa0195390:CDS | 40.0% | |
! | GTTATAGGCTTCAAGTTCTG+AGG | + | chr2_1:12237194-12237213 | Msa0195390:intron | 40.0% |
GGATGAATATAGTGAAGCCT+AGG | - | chr2_1:12237308-12237327 | None:intergenic | 40.0% | |
TTTCCTGCTTCAAAGCATGT+GGG | - | chr2_1:12237329-12237348 | None:intergenic | 40.0% | |
! | TTTTCCTGCTTCAAAGCATG+TGG | - | chr2_1:12237330-12237349 | None:intergenic | 40.0% |
CCACAAGCGAAAAATTCCAT+GGG | - | chr2_1:12237353-12237372 | None:intergenic | 40.0% | |
TCCACAAGCGAAAAATTCCA+TGG | - | chr2_1:12237354-12237373 | None:intergenic | 40.0% | |
TTGTAAGGGAAAACACATGC+AGG | + | chr2_1:12237544-12237563 | Msa0195390:intron | 40.0% | |
TAGAAACCAGAACCACACAA+AGG | + | chr2_1:12237582-12237601 | Msa0195390:intron | 40.0% | |
TAATTGCCTTTGTGTGGTTC+TGG | - | chr2_1:12237591-12237610 | None:intergenic | 40.0% | |
GGGATTGAGTAGTAAGAGAA+AGG | - | chr2_1:12237747-12237766 | None:intergenic | 40.0% | |
AGAGGGCTTCTAATATATGG+GGG | - | chr2_1:12237767-12237786 | None:intergenic | 40.0% | |
CGTAGAGGGCTTCTAATATA+TGG | - | chr2_1:12237770-12237789 | None:intergenic | 40.0% | |
CGTACAAAATTGAGTAGCAG+TGG | - | chr2_1:12237812-12237831 | None:intergenic | 40.0% | |
GTTCATTTCTCTCTCATGTG+AGG | + | chr2_1:12238007-12238026 | Msa0195390:intron | 40.0% | |
CGTATCATTAAGTGTGCCTA+AGG | + | chr2_1:12238301-12238320 | Msa0195390:intron | 40.0% | |
ACATCTCCAATTGTCCTATC+TGG | + | chr2_1:12238418-12238437 | Msa0195390:intron | 40.0% | |
TTCTCTGCTTAACTCCAGAT+AGG | - | chr2_1:12238435-12238454 | None:intergenic | 40.0% | |
GGAATGCAAACCTAAAAGGA+AGG | - | chr2_1:12238613-12238632 | None:intergenic | 40.0% | |
CAAACTAGGCCACTGAAATT+GGG | - | chr2_1:12238846-12238865 | None:intergenic | 40.0% | |
! | TAGAATTGGTCTAGTGGTGA+GGG | + | chr2_1:12238977-12238996 | Msa0195390:intron | 40.0% |
!! | TTTTTGGTGTACAACGGTGT+CGG | - | chr2_1:12239038-12239057 | None:intergenic | 40.0% |
ATGTACGTCTGACTGTAATG+AGG | + | chr2_1:12239107-12239126 | Msa0195390:intron | 40.0% | |
AATGAGGTGATAATCATGGC+AGG | + | chr2_1:12239123-12239142 | Msa0195390:intron | 40.0% | |
GATATGTGTCCCTCATATTG+AGG | + | chr2_1:12239256-12239275 | Msa0195390:CDS | 40.0% | |
TGGAGGTCAATGCATACTTA+AGG | - | chr2_1:12239333-12239352 | None:intergenic | 40.0% | |
TCAGTGCAAAATTCGATACC+GGG | - | chr2_1:12239725-12239744 | None:intergenic | 40.0% | |
CTCATTCTCAACCTACAGAA+AGG | - | chr2_1:12240108-12240127 | None:intergenic | 40.0% | |
AAACAATTTCGGTCTGCATC+TGG | + | chr2_1:12240227-12240246 | Msa0195390:CDS | 40.0% | |
! | AGAGATGCTATTTGTCGGAA+AGG | + | chr2_1:12240542-12240561 | Msa0195390:CDS | 40.0% |
!! | AGGTTTGAAGCCTTCCATTT+TGG | - | chr2_1:12240588-12240607 | None:intergenic | 40.0% |
! | CAACTGATAACTTGGCGTTT+TGG | - | chr2_1:12240625-12240644 | None:intergenic | 40.0% |
! | GATACTCTGCGTTTTACTTC+AGG | + | chr2_1:12240736-12240755 | Msa0195390:intron | 40.0% |
AGCATGTGTTGGAATTTCCA+TGG | + | chr2_1:12241165-12241184 | Msa0195390:intron | 40.0% | |
! | ACTTTGCTCCATCTTTTCCA+TGG | - | chr2_1:12241185-12241204 | None:intergenic | 40.0% |
CTGATTCCGTAAATCCTAGT+TGG | + | chr2_1:12241212-12241231 | Msa0195390:intron | 40.0% | |
! | TTTAGAGCAGATGCAGAGTT+GGG | + | chr2_1:12241287-12241306 | Msa0195390:CDS | 40.0% |
TGACCGTCAAAATCTTACCA+GGG | + | chr2_1:12241406-12241425 | Msa0195390:CDS | 40.0% | |
! | ATCCCCTGGTAAGATTTTGA+CGG | - | chr2_1:12241412-12241431 | None:intergenic | 40.0% |
AGTTGGCAGTATCCATTAGA+AGG | + | chr2_1:12241525-12241544 | Msa0195390:CDS | 40.0% | |
AGGACGACCATGTTTATTTG+TGG | + | chr2_1:12241658-12241677 | Msa0195390:three_prime_UTR | 40.0% | |
GGTATAATTAGCATGCTGCA+AGG | + | chr2_1:12241748-12241767 | Msa0195390:three_prime_UTR | 40.0% | |
! | GGTGGTGGTTAGAAAGTTGT+TGG | - | chr2_1:12234760-12234779 | None:intergenic | 45.0% |
!! | GAATAAGCGCTTTTTGGTGG+TGG | - | chr2_1:12234775-12234794 | None:intergenic | 45.0% |
! | CGGTTGGAATAAGCGCTTTT+TGG | - | chr2_1:12234781-12234800 | None:intergenic | 45.0% |
TTGGGATTGGGATTGAGGTT+TGG | - | chr2_1:12234831-12234850 | None:intergenic | 45.0% | |
GAGGGAGAATTGATTGGGAT+TGG | - | chr2_1:12234850-12234869 | None:intergenic | 45.0% | |
CCATTGGAGGGAGAATTGAT+TGG | - | chr2_1:12234856-12234875 | None:intergenic | 45.0% | |
CCAATCAATTCTCCCTCCAA+TGG | + | chr2_1:12234853-12234872 | Msa0195390:CDS | 45.0% | |
GAGGTAAGATAGGTCCCAAA+CGG | - | chr2_1:12234900-12234919 | None:intergenic | 45.0% | |
GGTTAGAGTTTGGAAGAGGA+GGG | - | chr2_1:12234952-12234971 | None:intergenic | 45.0% | |
TCAGGGTTAGAGTTTGGAAG+AGG | - | chr2_1:12234956-12234975 | None:intergenic | 45.0% | |
TCTGGATCAGGGTTAGAGTT+TGG | - | chr2_1:12234962-12234981 | None:intergenic | 45.0% | |
! | CTATCGTTTTCGTCTGGATC+AGG | - | chr2_1:12234974-12234993 | None:intergenic | 45.0% |
CTGATCCAGACGAAAACGAT+AGG | + | chr2_1:12234972-12234991 | Msa0195390:CDS | 45.0% | |
AGTTGGAGCAAGTTAACCTC+GGG | - | chr2_1:12235012-12235031 | None:intergenic | 45.0% | |
! | AACTTGCTCCAACTTTCTCG+CGG | + | chr2_1:12235018-12235037 | Msa0195390:CDS | 45.0% |
!! | CTAACAAAGCATCGAGTTCG+GGG | - | chr2_1:12235063-12235082 | None:intergenic | 45.0% |
CGGATTTCGATGAAGGGAAA+CGG | + | chr2_1:12235400-12235419 | Msa0195390:CDS | 45.0% | |
AAGGGAAACGGAGTTGTAGA+AGG | + | chr2_1:12235412-12235431 | Msa0195390:CDS | 45.0% | |
AAGGCTGTAGATTCTGCAGT+AGG | + | chr2_1:12235468-12235487 | Msa0195390:CDS | 45.0% | |
! | ACCGGTTCTTCTTCATGATC+CGG | - | chr2_1:12236005-12236024 | None:intergenic | 45.0% |
CCGTTAATATTCTGGGTCTC+TGG | - | chr2_1:12236047-12236066 | None:intergenic | 45.0% | |
CGCTGTCACCGTTAATATTC+TGG | - | chr2_1:12236055-12236074 | None:intergenic | 45.0% | |
TGAAGGCGACTTAGAAGGAT+CGG | - | chr2_1:12236132-12236151 | None:intergenic | 45.0% | |
TTGGTGCGAGAAATTGTGGT+TGG | + | chr2_1:12236235-12236254 | Msa0195390:intron | 45.0% | |
! | TTTTGCTTGCAGTGCCAAAC+AGG | + | chr2_1:12236274-12236293 | Msa0195390:intron | 45.0% |
TAAAAGAAACCCGGCCTGTT+TGG | - | chr2_1:12236291-12236310 | None:intergenic | 45.0% | |
ATCCTGCGGAATTTCCAAGA+AGG | + | chr2_1:12236326-12236345 | Msa0195390:CDS | 45.0% | |
AAGTATGCCTGTAGAGCTAG+AGG | + | chr2_1:12236482-12236501 | Msa0195390:CDS | 45.0% | |
AGTATGCCTGTAGAGCTAGA+GGG | + | chr2_1:12236483-12236502 | Msa0195390:CDS | 45.0% | |
TTCATTACAGAGAGAGGGAG+TGG | - | chr2_1:12236796-12236815 | None:intergenic | 45.0% | |
CCCTCTCTCTGTAATGAATC+AGG | + | chr2_1:12236798-12236817 | Msa0195390:intron | 45.0% | |
AAAAGTCGAGGCAAACATGC+AGG | + | chr2_1:12237280-12237299 | Msa0195390:CDS | 45.0% | |
!! | CTTTGAAGCAGGAAAACCCA+TGG | + | chr2_1:12237334-12237353 | Msa0195390:CDS | 45.0% |
! | CCCATGGAATTTTTCGCTTG+TGG | + | chr2_1:12237350-12237369 | Msa0195390:CDS | 45.0% |
!! | CTTGTGGAAGTAACTTGCTG+CGG | + | chr2_1:12237366-12237385 | Msa0195390:CDS | 45.0% |
TTACATTAGGTCCCCAACAC+TGG | - | chr2_1:12237507-12237526 | None:intergenic | 45.0% | |
! | AGTGTTGGGGACCTAATGTA+AGG | + | chr2_1:12237506-12237525 | Msa0195390:intron | 45.0% |
GTGTTGGGGACCTAATGTAA+GGG | + | chr2_1:12237507-12237526 | Msa0195390:intron | 45.0% | |
GAAAACACATGCAGGTCACA+AGG | + | chr2_1:12237552-12237571 | Msa0195390:intron | 45.0% | |
AAGGCATAAACCACTTGGGT+TGG | + | chr2_1:12238753-12238772 | Msa0195390:intron | 45.0% | |
AATCTAACCCGAGACCTTGA+AGG | - | chr2_1:12238814-12238833 | None:intergenic | 45.0% | |
! | GTCTCGGGTTAGATTCTCTT+CGG | + | chr2_1:12238819-12238838 | Msa0195390:intron | 45.0% |
CCAAACTAGGCCACTGAAAT+TGG | - | chr2_1:12238847-12238866 | None:intergenic | 45.0% | |
CCAATTTCAGTGGCCTAGTT+TGG | + | chr2_1:12238844-12238863 | Msa0195390:intron | 45.0% | |
! | AGCCACTAGAATTGGTCTAG+TGG | + | chr2_1:12238971-12238990 | Msa0195390:intron | 45.0% |
CACCACTAGACCAATTCTAG+TGG | - | chr2_1:12238976-12238995 | None:intergenic | 45.0% | |
! | CTAGAATTGGTCTAGTGGTG+AGG | + | chr2_1:12238976-12238995 | Msa0195390:intron | 45.0% |
! | AGAATTGGTCTAGTGGTGAG+GGG | + | chr2_1:12238978-12238997 | Msa0195390:intron | 45.0% |
TTGTCTTCAGCCGAGTTATG+TGG | - | chr2_1:12239203-12239222 | None:intergenic | 45.0% | |
ATCCTCGTAGAAAGTCTTCC+CGG | + | chr2_1:12239704-12239723 | Msa0195390:intron | 45.0% | |
! | CTGTAGGTTGAGAATGAGTC+TGG | + | chr2_1:12240110-12240129 | Msa0195390:intron | 45.0% |
! | GATGCTATTTGTCGGAAAGG+TGG | + | chr2_1:12240545-12240564 | Msa0195390:CDS | 45.0% |
!! | CAGTTTGGAGTACTGGAGTT+GGG | - | chr2_1:12240840-12240859 | None:intergenic | 45.0% |
CATTCACATTGCCACCAGTT+TGG | - | chr2_1:12240855-12240874 | None:intergenic | 45.0% | |
CCAACACATGCTACTGTTGA+TGG | - | chr2_1:12241157-12241176 | None:intergenic | 45.0% | |
CCATCAACAGTAGCATGTGT+TGG | + | chr2_1:12241154-12241173 | Msa0195390:intron | 45.0% | |
! | ACTCTGCATCTGCTCTAAAC+TGG | - | chr2_1:12241286-12241305 | None:intergenic | 45.0% |
! | GTTTAGAGCAGATGCAGAGT+TGG | + | chr2_1:12241286-12241305 | Msa0195390:CDS | 45.0% |
GTGACCGTCAAAATCTTACC+AGG | + | chr2_1:12241405-12241424 | Msa0195390:CDS | 45.0% | |
GACCGTCAAAATCTTACCAG+GGG | + | chr2_1:12241407-12241426 | Msa0195390:CDS | 45.0% | |
! | TTGGCGGAGAAGGTACGATA+CGG | - | chr2_1:12234733-12234752 | None:intergenic | 50.0% |
TGTTGGATGTTTGGCGGAGA+AGG | - | chr2_1:12234743-12234762 | None:intergenic | 50.0% | |
TGGGATTGGGATTGGGATTG+AGG | - | chr2_1:12234836-12234855 | None:intergenic | 50.0% | |
CAAACGGAGGAGAGATCTTC+GGG | - | chr2_1:12234884-12234903 | None:intergenic | 50.0% | |
CCAAACGGAGGAGAGATCTT+CGG | - | chr2_1:12234885-12234904 | None:intergenic | 50.0% | |
CGAAGATCTCTCCTCCGTTT+GGG | + | chr2_1:12234883-12234902 | Msa0195390:CDS | 50.0% | |
GTAAGATAGGTCCCAAACGG+AGG | - | chr2_1:12234897-12234916 | None:intergenic | 50.0% | |
CGAAGTCGAGGAGGTAAGAT+AGG | - | chr2_1:12234910-12234929 | None:intergenic | 50.0% | |
GAATATCGTCGTCGAAGTCG+AGG | - | chr2_1:12234922-12234941 | None:intergenic | 50.0% | |
GGGTTAGAGTTTGGAAGAGG+AGG | - | chr2_1:12234953-12234972 | None:intergenic | 50.0% | |
! | CGGATCCTATCGTTTTCGTC+TGG | - | chr2_1:12234980-12234999 | None:intergenic | 50.0% |
TTAACCTCGGGTCACGCTTT+CGG | - | chr2_1:12235000-12235019 | None:intergenic | 50.0% | |
ACTTGCTCCAACTTTCTCGC+GGG | + | chr2_1:12235019-12235038 | Msa0195390:CDS | 50.0% | |
TACTTGACCCGCGAGAAAGT+TGG | - | chr2_1:12235029-12235048 | None:intergenic | 50.0% | |
TACCAGGGAAGAAACGAGCT+CGG | + | chr2_1:12235095-12235114 | Msa0195390:CDS | 50.0% | |
AAGGCTATCATCGACGGCAT+AGG | + | chr2_1:12235185-12235204 | Msa0195390:CDS | 50.0% | |
AGGCTATCATCGACGGCATA+GGG | + | chr2_1:12235186-12235205 | Msa0195390:CDS | 50.0% | |
! | GACGGCATAGGGTTTGTTTG+CGG | + | chr2_1:12235197-12235216 | Msa0195390:CDS | 50.0% |
TGGAGCGGCATAATACTAGG+AGG | + | chr2_1:12235439-12235458 | Msa0195390:CDS | 50.0% | |
AGCGGCATAATACTAGGAGG+AGG | + | chr2_1:12235442-12235461 | Msa0195390:CDS | 50.0% | |
AAGTTATCCTATCGCGCCGA+CGG | - | chr2_1:12235698-12235717 | None:intergenic | 50.0% | |
GCCGGATCATGAAGAAGAAC+CGG | + | chr2_1:12236001-12236020 | Msa0195390:CDS | 50.0% | |
GCTTTACGACTGGAATCCTG+CGG | + | chr2_1:12236312-12236331 | Msa0195390:CDS | 50.0% | |
AGCCTTCTTGGAAATTCCGC+AGG | - | chr2_1:12236331-12236350 | None:intergenic | 50.0% | |
CGGAATTTCCAAGAAGGCTG+CGG | + | chr2_1:12236332-12236351 | Msa0195390:CDS | 50.0% | |
CAGGCATACTTGCCAACCAT+TGG | - | chr2_1:12236473-12236492 | None:intergenic | 50.0% | |
TAGAGGGATATATCCGCCCT+GGG | + | chr2_1:12236499-12236518 | Msa0195390:CDS | 50.0% | |
AGGGAGTGGAGAAATGTTGC+AGG | - | chr2_1:12236782-12236801 | None:intergenic | 50.0% | |
GCTCCCAGAAAGATGCTATC+TGG | + | chr2_1:12236998-12237017 | Msa0195390:CDS | 50.0% | |
!! | CATCCCACATGCTTTGAAGC+AGG | + | chr2_1:12237323-12237342 | Msa0195390:CDS | 50.0% |
CAGCTCAGCTATGGGCAATA+AGG | - | chr2_1:12237687-12237706 | None:intergenic | 50.0% | |
CAGAGTAGCAGCTCAGCTAT+GGG | - | chr2_1:12237695-12237714 | None:intergenic | 50.0% | |
ACAGAGTAGCAGCTCAGCTA+TGG | - | chr2_1:12237696-12237715 | None:intergenic | 50.0% | |
AGTAGCAGTGGAGTGAGAGA+GGG | - | chr2_1:12237800-12237819 | None:intergenic | 50.0% | |
TCTCTCTCATGTGAGGATCG+AGG | + | chr2_1:12238014-12238033 | Msa0195390:intron | 50.0% | |
CATGTGAGGATCGAGGAAAG+AGG | + | chr2_1:12238021-12238040 | Msa0195390:intron | 50.0% | |
!! | ATAAACCACTTGGGTTGGCC+TGG | + | chr2_1:12238758-12238777 | Msa0195390:intron | 50.0% |
!! | CTTTGGAGTGTGCTCCTTCA+AGG | + | chr2_1:12238797-12238816 | Msa0195390:intron | 50.0% |
AGTGTGCTCCTTCAAGGTCT+CGG | + | chr2_1:12238803-12238822 | Msa0195390:intron | 50.0% | |
CTCTTCGGTCCCAATTTCAG+TGG | + | chr2_1:12238834-12238853 | Msa0195390:intron | 50.0% | |
GTAAGTATGCACGAGGTCCT+AGG | + | chr2_1:12239006-12239025 | Msa0195390:intron | 50.0% | |
CGTTCCGTCTCCACATAACT+CGG | + | chr2_1:12239190-12239209 | Msa0195390:CDS | 50.0% | |
TCAGCCGAGTTATGTGGAGA+CGG | - | chr2_1:12239197-12239216 | None:intergenic | 50.0% | |
TACCGGGAAGACTTTCTACG+AGG | - | chr2_1:12239709-12239728 | None:intergenic | 50.0% | |
TGACATGGACCAACTGCTGA+AGG | + | chr2_1:12240505-12240524 | Msa0195390:CDS | 50.0% | |
GACATGGACCAACTGCTGAA+GGG | + | chr2_1:12240506-12240525 | Msa0195390:CDS | 50.0% | |
TACACATGCCCTTCAGCAGT+TGG | - | chr2_1:12240517-12240536 | None:intergenic | 50.0% | |
GCTATTTGTCGGAAAGGTGG+AGG | + | chr2_1:12240548-12240567 | Msa0195390:CDS | 50.0% | |
!! | TTTTGGGAACTGCACTGAGC+AGG | - | chr2_1:12240608-12240627 | None:intergenic | 50.0% |
ACATAAATGCACGGCCCACT+AGG | - | chr2_1:12240796-12240815 | None:intergenic | 50.0% | |
!! | CCAGTTTGGAGTACTGGAGT+TGG | - | chr2_1:12240841-12240860 | None:intergenic | 50.0% |
CCAACTCCAGTACTCCAAAC+TGG | + | chr2_1:12240838-12240857 | Msa0195390:intron | 50.0% | |
ACTCCAGTACTCCAAACTGG+TGG | + | chr2_1:12240841-12240860 | Msa0195390:intron | 50.0% | |
! | TTGCCACCAGTTTGGAGTAC+TGG | - | chr2_1:12240847-12240866 | None:intergenic | 50.0% |
TCGAGATCTCAAGAATCCCC+TGG | - | chr2_1:12241426-12241445 | None:intergenic | 50.0% | |
TCATGGGAGGGTTAACGAGT+TGG | + | chr2_1:12241508-12241527 | Msa0195390:CDS | 50.0% | |
!! | GGTACGATACGGTGGTGGAT+GGG | - | chr2_1:12234722-12234741 | None:intergenic | 55.0% |
!! | AGGTACGATACGGTGGTGGA+TGG | - | chr2_1:12234723-12234742 | None:intergenic | 55.0% |
! | GAGAAGGTACGATACGGTGG+TGG | - | chr2_1:12234727-12234746 | None:intergenic | 55.0% |
AGATCTTCGGGAGGGTCCAT+TGG | - | chr2_1:12234872-12234891 | None:intergenic | 55.0% | |
CCGAAGATCTCTCCTCCGTT+TGG | + | chr2_1:12234882-12234901 | Msa0195390:CDS | 55.0% | |
TATCGTCGTCGAAGTCGAGG+AGG | - | chr2_1:12234919-12234938 | None:intergenic | 55.0% | |
TTTGGAAGAGGAGGGAGCTG+TGG | - | chr2_1:12234944-12234963 | None:intergenic | 55.0% | |
CTTATTTCCGTCGGCGCGAT+AGG | + | chr2_1:12235688-12235707 | Msa0195390:intron | 55.0% | |
CTAGAGGGATATATCCGCCC+TGG | + | chr2_1:12236498-12236517 | Msa0195390:CDS | 55.0% | |
TCGTCAGGATCGTACACCCA+GGG | - | chr2_1:12236518-12236537 | None:intergenic | 55.0% | |
ATCGTCAGGATCGTACACCC+AGG | - | chr2_1:12236519-12236538 | None:intergenic | 55.0% | |
AGGCAAACATGCAGGCACCT+AGG | + | chr2_1:12237288-12237307 | Msa0195390:CDS | 55.0% | |
! | ACTTGCTGCGGCCCAAGTTT+CGG | + | chr2_1:12237378-12237397 | Msa0195390:CDS | 55.0% |
GAGAGGGGAAATCGCGTAGA+GGG | - | chr2_1:12237784-12237803 | None:intergenic | 55.0% | |
AGAGAGGGGAAATCGCGTAG+AGG | - | chr2_1:12237785-12237804 | None:intergenic | 55.0% | |
GTAGCAGTGGAGTGAGAGAG+GGG | - | chr2_1:12237799-12237818 | None:intergenic | 55.0% | |
GAGTAGCAGTGGAGTGAGAG+AGG | - | chr2_1:12237801-12237820 | None:intergenic | 55.0% | |
!! | GTGGTGTTGGCTTGGGACTT+TGG | + | chr2_1:12238780-12238799 | Msa0195390:intron | 55.0% |
GTGTGCTCCTTCAAGGTCTC+GGG | + | chr2_1:12238804-12238823 | Msa0195390:intron | 55.0% | |
TGGTCTAGTGGTGAGGGGTT+CGG | + | chr2_1:12238983-12239002 | Msa0195390:intron | 55.0% | |
GGTTCGGGTAAGTATGCACG+AGG | + | chr2_1:12238999-12239018 | Msa0195390:intron | 55.0% | |
!! | TGGTGTACAACGGTGTCGGT+CGG | - | chr2_1:12239034-12239053 | None:intergenic | 55.0% |
CCTCAATAAATGCAGGCCCC+AGG | - | chr2_1:12239289-12239308 | None:intergenic | 55.0% | |
CCTGGGGCCTGCATTTATTG+AGG | + | chr2_1:12239286-12239305 | Msa0195390:CDS | 55.0% | |
! | GCGGAGAAGGTACGATACGG+TGG | - | chr2_1:12234730-12234749 | None:intergenic | 60.0% |
CTTCGGGAGGGTCCATTGGA+GGG | - | chr2_1:12234868-12234887 | None:intergenic | 60.0% | |
TCTTCGGGAGGGTCCATTGG+AGG | - | chr2_1:12234869-12234888 | None:intergenic | 60.0% | |
CGGAGGAGAGATCTTCGGGA+GGG | - | chr2_1:12234880-12234899 | None:intergenic | 60.0% | |
ACGGAGGAGAGATCTTCGGG+AGG | - | chr2_1:12234881-12234900 | None:intergenic | 60.0% | |
TCGAGTTCGGGGCATGCACA+TGG | - | chr2_1:12235052-12235071 | None:intergenic | 60.0% | |
GTCCGAGCTCGTTTCTTCCC+TGG | - | chr2_1:12235100-12235119 | None:intergenic | 60.0% | |
GCTTGCAGTGCCAAACAGGC+CGG | + | chr2_1:12236278-12236297 | Msa0195390:intron | 60.0% | |
CTTGCAGTGCCAAACAGGCC+GGG | + | chr2_1:12236279-12236298 | Msa0195390:intron | 60.0% | |
ACTTGGAGCCGCAGCCTTCT+TGG | - | chr2_1:12236343-12236362 | None:intergenic | 60.0% | |
TCAGGATCGTACACCCAGGG+CGG | - | chr2_1:12236515-12236534 | None:intergenic | 60.0% | |
!! | AACCACTTGGGTTGGCCTGG+TGG | + | chr2_1:12238761-12238780 | Msa0195390:intron | 60.0% |
!! | TTGGGTTGGCCTGGTGGTGT+TGG | + | chr2_1:12238767-12238786 | Msa0195390:intron | 60.0% |
!! | TTGGCCTGGTGGTGTTGGCT+TGG | + | chr2_1:12238772-12238791 | Msa0195390:intron | 60.0% |
!! | TGGCCTGGTGGTGTTGGCTT+GGG | + | chr2_1:12238773-12238792 | Msa0195390:intron | 60.0% |
AGTCCCAAGCCAACACCACC+AGG | - | chr2_1:12238779-12238798 | None:intergenic | 60.0% | |
GGTCTAGTGGTGAGGGGTTC+GGG | + | chr2_1:12238984-12239003 | Msa0195390:intron | 60.0% | |
!! | AACGGTGTCGGTCGGAACCT+AGG | - | chr2_1:12239026-12239045 | None:intergenic | 60.0% |
! | GGATCCGAAAGCGTGACCCG+AGG | + | chr2_1:12234993-12235012 | Msa0195390:CDS | 65.0% |
TCGGCGCGTTGTCAGGTTCC+TGG | + | chr2_1:12235136-12235155 | Msa0195390:CDS | 65.0% | |
CACCACCAGGCCAACCCAAG+TGG | - | chr2_1:12238766-12238785 | None:intergenic | 65.0% | |
! | GGCTGCATCGGCGCGTTGTC+AGG | + | chr2_1:12235129-12235148 | Msa0195390:CDS | 70.0% |
ACGAGCTCGGACTGCCCGCG+CGG | + | chr2_1:12235108-12235127 | Msa0195390:CDS | 75.0% | |
GACTGCCCGCGCGGCTGCAT+CGG | + | chr2_1:12235117-12235136 | Msa0195390:CDS | 75.0% | |
! | AACGCGCCGATGCAGCCGCG+CGG | - | chr2_1:12235126-12235145 | None:intergenic | 75.0% |
!! | ACGCGCCGATGCAGCCGCGC+GGG | - | chr2_1:12235125-12235144 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 12234654 | 12241852 | 12234654 | ID=Msa0195390;Name=Msa0195390 |
chr2_1 | mRNA | 12234654 | 12241852 | 12234654 | ID=Msa0195390-mRNA-1;Parent=Msa0195390;Name=Msa0195390-mRNA-1;_AED=0.05;_eAED=0.05;_QI=167|1|1|1|1|1|10|287|764 |
chr2_1 | exon | 12234654 | 12235284 | 12234654 | ID=Msa0195390-mRNA-1:exon:5307;Parent=Msa0195390-mRNA-1 |
chr2_1 | exon | 12235386 | 12235558 | 12235386 | ID=Msa0195390-mRNA-1:exon:5308;Parent=Msa0195390-mRNA-1 |
chr2_1 | exon | 12235958 | 12236184 | 12235958 | ID=Msa0195390-mRNA-1:exon:5309;Parent=Msa0195390-mRNA-1 |
chr2_1 | exon | 12236286 | 12236360 | 12236286 | ID=Msa0195390-mRNA-1:exon:5310;Parent=Msa0195390-mRNA-1 |
chr2_1 | exon | 12236465 | 12236572 | 12236465 | ID=Msa0195390-mRNA-1:exon:5311;Parent=Msa0195390-mRNA-1 |
chr2_1 | exon | 12236959 | 12237073 | 12236959 | ID=Msa0195390-mRNA-1:exon:5312;Parent=Msa0195390-mRNA-1 |
chr2_1 | exon | 12237264 | 12237399 | 12237264 | ID=Msa0195390-mRNA-1:exon:5313;Parent=Msa0195390-mRNA-1 |
chr2_1 | exon | 12239145 | 12239307 | 12239145 | ID=Msa0195390-mRNA-1:exon:5314;Parent=Msa0195390-mRNA-1 |
chr2_1 | exon | 12240116 | 12240661 | 12240116 | ID=Msa0195390-mRNA-1:exon:5315;Parent=Msa0195390-mRNA-1 |
chr2_1 | exon | 12241278 | 12241852 | 12241278 | ID=Msa0195390-mRNA-1:exon:5316;Parent=Msa0195390-mRNA-1 |
chr2_1 | five_prime_UTR | 12234654 | 12234820 | 12234654 | ID=Msa0195390-mRNA-1:five_prime_utr;Parent=Msa0195390-mRNA-1 |
chr2_1 | CDS | 12234821 | 12235284 | 12234821 | ID=Msa0195390-mRNA-1:cds;Parent=Msa0195390-mRNA-1 |
chr2_1 | CDS | 12235386 | 12235558 | 12235386 | ID=Msa0195390-mRNA-1:cds;Parent=Msa0195390-mRNA-1 |
chr2_1 | CDS | 12235958 | 12236184 | 12235958 | ID=Msa0195390-mRNA-1:cds;Parent=Msa0195390-mRNA-1 |
chr2_1 | CDS | 12236286 | 12236360 | 12236286 | ID=Msa0195390-mRNA-1:cds;Parent=Msa0195390-mRNA-1 |
chr2_1 | CDS | 12236465 | 12236572 | 12236465 | ID=Msa0195390-mRNA-1:cds;Parent=Msa0195390-mRNA-1 |
chr2_1 | CDS | 12236959 | 12237073 | 12236959 | ID=Msa0195390-mRNA-1:cds;Parent=Msa0195390-mRNA-1 |
chr2_1 | CDS | 12237264 | 12237399 | 12237264 | ID=Msa0195390-mRNA-1:cds;Parent=Msa0195390-mRNA-1 |
chr2_1 | CDS | 12239145 | 12239307 | 12239145 | ID=Msa0195390-mRNA-1:cds;Parent=Msa0195390-mRNA-1 |
chr2_1 | CDS | 12240116 | 12240661 | 12240116 | ID=Msa0195390-mRNA-1:cds;Parent=Msa0195390-mRNA-1 |
chr2_1 | CDS | 12241278 | 12241565 | 12241278 | ID=Msa0195390-mRNA-1:cds;Parent=Msa0195390-mRNA-1 |
chr2_1 | three_prime_UTR | 12241566 | 12241852 | 12241566 | ID=Msa0195390-mRNA-1:three_prime_utr;Parent=Msa0195390-mRNA-1 |
Gene Sequence |
Protein sequence |