Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195510 | XP_013462681.3 | 96.697 | 757 | 25 | 0 | 8 | 764 | 2 | 758 | 0.0 | 1519 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195510 | sp|Q8S9G8|SPL7_ARATH | 46.028 | 793 | 367 | 16 | 14 | 758 | 15 | 794 | 0.0 | 659 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195510 | A0A396J706 | 96.697 | 757 | 25 | 0 | 8 | 764 | 2 | 758 | 0.0 | 1519 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0195510 | TF | SBP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0142610 | Msa0195510 | 0.894173 | 3.163194e-75 | -8.615850e-47 |
| Msa0195390 | Msa0195510 | 0.997908 | 9.113851e-252 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195510 | MtrunA17_Chr2g0286661 | 96.697 | 757 | 25 | 0 | 8 | 764 | 2 | 758 | 0.0 | 1519 |
| Msa0195510 | MtrunA17_Chr1g0194121 | 27.607 | 326 | 199 | 11 | 287 | 598 | 447 | 749 | 1.57e-28 | 122 |
| Msa0195510 | MtrunA17_Chr1g0194121 | 48.315 | 89 | 46 | 0 | 94 | 182 | 132 | 220 | 2.66e-21 | 99.8 |
| Msa0195510 | MtrunA17_Chr7g0270541 | 26.176 | 340 | 213 | 10 | 290 | 615 | 449 | 764 | 1.25e-25 | 113 |
| Msa0195510 | MtrunA17_Chr7g0270541 | 46.809 | 94 | 48 | 1 | 96 | 187 | 130 | 223 | 6.75e-22 | 101 |
| Msa0195510 | MtrunA17_Chr1g0162871 | 29.600 | 250 | 161 | 4 | 278 | 519 | 449 | 691 | 3.36e-25 | 112 |
| Msa0195510 | MtrunA17_Chr1g0162871 | 38.323 | 167 | 82 | 6 | 46 | 201 | 41 | 197 | 2.08e-22 | 103 |
| Msa0195510 | MtrunA17_Chr2g0302791 | 24.688 | 401 | 266 | 9 | 290 | 677 | 465 | 842 | 4.90e-24 | 108 |
| Msa0195510 | MtrunA17_Chr2g0302791 | 48.958 | 96 | 47 | 1 | 96 | 189 | 124 | 219 | 6.14e-22 | 101 |
| Msa0195510 | MtrunA17_Chr8g0334671 | 55.000 | 80 | 36 | 0 | 103 | 182 | 181 | 260 | 6.97e-24 | 103 |
| Msa0195510 | MtrunA17_Chr4g0046991 | 56.410 | 78 | 34 | 0 | 109 | 186 | 73 | 150 | 2.58e-23 | 97.1 |
| Msa0195510 | MtrunA17_Chr3g0122411 | 37.956 | 137 | 82 | 2 | 94 | 228 | 150 | 285 | 4.22e-22 | 100 |
| Msa0195510 | MtrunA17_Chr7g0258471 | 46.512 | 86 | 46 | 0 | 97 | 182 | 130 | 215 | 4.93e-22 | 99.4 |
| Msa0195510 | MtrunA17_Chr5g0420051 | 48.913 | 92 | 46 | 1 | 96 | 186 | 167 | 258 | 4.94e-22 | 99.8 |
| Msa0195510 | MtrunA17_Chr7g0231911 | 54.217 | 83 | 38 | 0 | 105 | 187 | 145 | 227 | 6.18e-22 | 97.4 |
| Msa0195510 | MtrunA17_Chr8g0386271 | 47.727 | 88 | 45 | 1 | 96 | 182 | 85 | 172 | 1.93e-21 | 97.4 |
| Msa0195510 | MtrunA17_Chr7g0224821 | 45.977 | 87 | 47 | 0 | 96 | 182 | 64 | 150 | 2.37e-21 | 96.7 |
| Msa0195510 | MtrunA17_Chr2g0308321 | 47.253 | 91 | 47 | 1 | 96 | 185 | 157 | 247 | 2.51e-21 | 98.6 |
| Msa0195510 | MtrunA17_Chr4g0061651 | 47.872 | 94 | 46 | 2 | 96 | 188 | 112 | 203 | 2.68e-21 | 97.8 |
| Msa0195510 | MtrunA17_Chr8g0360361 | 40.385 | 104 | 62 | 0 | 109 | 212 | 65 | 168 | 1.32e-19 | 87.0 |
| Msa0195510 | MtrunA17_Chr2g0282521 | 43.956 | 91 | 51 | 0 | 96 | 186 | 51 | 141 | 2.05e-19 | 85.5 |
| Msa0195510 | MtrunA17_Chr8g0377401 | 52.055 | 73 | 35 | 0 | 109 | 181 | 162 | 234 | 3.85e-19 | 87.8 |
| Msa0195510 | MtrunA17_Chr8g0377421 | 40.833 | 120 | 60 | 2 | 80 | 188 | 95 | 214 | 4.42e-19 | 89.0 |
| Msa0195510 | MtrunA17_Chr3g0132091 | 43.478 | 92 | 52 | 0 | 91 | 182 | 55 | 146 | 7.55e-19 | 89.0 |
| Msa0195510 | MtrunA17_Chr8g0377431 | 45.070 | 71 | 39 | 0 | 94 | 164 | 136 | 206 | 7.34e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195510 | AT5G18830.3 | 46.028 | 793 | 367 | 16 | 14 | 758 | 15 | 794 | 0.0 | 659 |
| Msa0195510 | AT5G18830.1 | 46.028 | 793 | 367 | 16 | 14 | 758 | 15 | 794 | 0.0 | 659 |
| Msa0195510 | AT5G18830.2 | 45.583 | 781 | 362 | 13 | 14 | 758 | 15 | 768 | 0.0 | 657 |
| Msa0195510 | AT1G76580.1 | 28.629 | 248 | 162 | 4 | 278 | 518 | 482 | 721 | 5.99e-25 | 112 |
| Msa0195510 | AT1G76580.1 | 41.905 | 105 | 58 | 1 | 108 | 212 | 113 | 214 | 1.17e-21 | 101 |
| Msa0195510 | AT1G53160.3 | 49.020 | 102 | 47 | 2 | 94 | 190 | 34 | 135 | 8.54e-25 | 102 |
| Msa0195510 | AT2G33810.1 | 47.826 | 92 | 48 | 0 | 95 | 186 | 40 | 131 | 4.29e-24 | 99.0 |
| Msa0195510 | AT1G02065.1 | 51.613 | 93 | 44 | 1 | 101 | 193 | 180 | 271 | 6.18e-24 | 104 |
| Msa0195510 | AT1G69170.1 | 48.421 | 95 | 49 | 0 | 91 | 185 | 106 | 200 | 1.76e-23 | 104 |
| Msa0195510 | AT2G47070.1 | 51.042 | 96 | 40 | 2 | 88 | 182 | 90 | 179 | 1.84e-23 | 107 |
| Msa0195510 | AT2G47070.1 | 27.385 | 325 | 190 | 10 | 290 | 600 | 360 | 652 | 4.32e-22 | 102 |
| Msa0195510 | AT1G27360.2 | 53.333 | 75 | 35 | 0 | 108 | 182 | 174 | 248 | 9.92e-23 | 101 |
| Msa0195510 | AT1G27360.1 | 53.333 | 75 | 35 | 0 | 108 | 182 | 174 | 248 | 9.92e-23 | 101 |
| Msa0195510 | AT1G27360.3 | 53.333 | 75 | 35 | 0 | 108 | 182 | 174 | 248 | 9.92e-23 | 101 |
| Msa0195510 | AT1G27360.4 | 53.333 | 75 | 35 | 0 | 108 | 182 | 174 | 248 | 9.92e-23 | 101 |
| Msa0195510 | AT1G27370.6 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.05e-22 | 100 |
| Msa0195510 | AT3G57920.1 | 45.714 | 105 | 55 | 2 | 87 | 189 | 35 | 139 | 1.30e-22 | 100 |
| Msa0195510 | AT1G27370.1 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.39e-22 | 101 |
| Msa0195510 | AT1G27370.5 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.39e-22 | 101 |
| Msa0195510 | AT1G27370.3 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.39e-22 | 101 |
| Msa0195510 | AT1G27370.2 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.39e-22 | 101 |
| Msa0195510 | AT1G27370.4 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.39e-22 | 101 |
| Msa0195510 | AT1G27370.7 | 46.392 | 97 | 52 | 0 | 86 | 182 | 153 | 249 | 1.39e-22 | 101 |
| Msa0195510 | AT3G60030.1 | 55.696 | 79 | 35 | 0 | 109 | 187 | 127 | 205 | 1.50e-22 | 103 |
| Msa0195510 | AT3G60030.1 | 25.305 | 328 | 201 | 11 | 287 | 600 | 398 | 695 | 2.48e-19 | 94.0 |
| Msa0195510 | AT1G53160.2 | 45.000 | 120 | 56 | 3 | 94 | 203 | 34 | 153 | 1.83e-22 | 95.5 |
| Msa0195510 | AT1G53160.1 | 45.000 | 120 | 56 | 3 | 94 | 203 | 34 | 153 | 1.83e-22 | 95.5 |
| Msa0195510 | AT1G20980.1 | 42.857 | 119 | 64 | 1 | 93 | 207 | 104 | 222 | 5.84e-22 | 102 |
| Msa0195510 | AT1G20980.1 | 24.779 | 339 | 225 | 8 | 278 | 604 | 485 | 805 | 4.42e-21 | 99.4 |
| Msa0195510 | AT1G76580.3 | 41.905 | 105 | 58 | 1 | 108 | 212 | 113 | 214 | 6.69e-22 | 101 |
| Msa0195510 | AT1G76580.3 | 30.682 | 176 | 114 | 2 | 278 | 446 | 482 | 656 | 5.31e-21 | 98.6 |
| Msa0195510 | AT2G47070.2 | 27.385 | 325 | 190 | 10 | 290 | 600 | 231 | 523 | 7.34e-22 | 101 |
| Msa0195510 | AT2G47070.2 | 56.250 | 48 | 21 | 0 | 135 | 182 | 3 | 50 | 4.22e-12 | 70.5 |
| Msa0195510 | AT1G76580.2 | 41.905 | 105 | 58 | 1 | 108 | 212 | 113 | 214 | 7.61e-22 | 101 |
| Msa0195510 | AT1G76580.2 | 30.682 | 176 | 114 | 2 | 278 | 446 | 482 | 656 | 4.38e-21 | 99.0 |
| Msa0195510 | AT5G43270.3 | 53.247 | 77 | 36 | 0 | 106 | 182 | 166 | 242 | 1.97e-21 | 98.2 |
| Msa0195510 | AT5G43270.1 | 53.247 | 77 | 36 | 0 | 106 | 182 | 166 | 242 | 1.97e-21 | 98.2 |
| Msa0195510 | AT5G43270.2 | 53.247 | 77 | 36 | 0 | 106 | 182 | 166 | 242 | 1.97e-21 | 98.2 |
| Msa0195510 | AT3G15270.1 | 53.165 | 79 | 37 | 0 | 109 | 187 | 63 | 141 | 2.95e-20 | 89.4 |
| Msa0195510 | AT5G50570.1 | 50.000 | 74 | 37 | 0 | 109 | 182 | 101 | 174 | 5.21e-20 | 93.2 |
| Msa0195510 | AT5G50570.2 | 50.000 | 74 | 37 | 0 | 109 | 182 | 101 | 174 | 5.21e-20 | 93.2 |
| Msa0195510 | AT5G50670.1 | 50.000 | 74 | 37 | 0 | 109 | 182 | 101 | 174 | 5.21e-20 | 93.2 |
| Msa0195510 | AT5G50670.2 | 50.000 | 74 | 37 | 0 | 109 | 182 | 101 | 174 | 5.21e-20 | 93.2 |
| Msa0195510 | AT2G42200.1 | 52.000 | 75 | 36 | 0 | 108 | 182 | 73 | 147 | 9.45e-19 | 89.4 |
| Msa0195510 | AT1G02065.2 | 48.214 | 56 | 29 | 0 | 101 | 156 | 180 | 235 | 1.26e-11 | 65.9 |
Find 195 sgRNAs with CRISPR-Local
Find 501 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGATTCAACTATCATTT+TGG | 0.092702 | 2_1:+12346788 | Msa0195510:CDS |
| TCTTCCAGATAGCATCTTTC+TGG | 0.114884 | 2_1:-12343370 | None:intergenic |
| AACTTTATTCCTGTACTTAT+TGG | 0.134941 | 2_1:+12346507 | Msa0195510:CDS |
| ACATTTATCCACATAATATT+TGG | 0.170789 | 2_1:-12342920 | None:intergenic |
| ATACCTTCAACCCATAAAAT+TGG | 0.177084 | 2_1:-12348097 | None:intergenic |
| GTTGATATTTCTGAGCTTAA+AGG | 0.179143 | 2_1:+12341534 | Msa0195510:CDS |
| CGCTGTCACCGTTAATATTC+TGG | 0.195200 | 2_1:-12342420 | None:intergenic |
| TTTGTTATGCTTATCAAATT+TGG | 0.209664 | 2_1:-12346822 | None:intergenic |
| ACTTTATTCCTGTACTTATT+GGG | 0.226415 | 2_1:+12346508 | Msa0195510:CDS |
| GAAGAAGAACCGGTTGTTAA+TGG | 0.267583 | 2_1:+12342379 | Msa0195510:CDS |
| ACTTGGAGCCGCAGCCTTCT+TGG | 0.274103 | 2_1:-12342708 | None:intergenic |
| AAAGGATATTATAATGAATA+TGG | 0.277893 | 2_1:+12347731 | Msa0195510:CDS |
| TTGGGATTGGGATTGAGGTT+TGG | 0.287122 | 2_1:-12341196 | None:intergenic |
| CTCTCCTTTCTAAACAATTT+CGG | 0.289124 | 2_1:+12346583 | Msa0195510:CDS |
| CAACTGATAACTTGGCGTTT+TGG | 0.290551 | 2_1:-12346989 | None:intergenic |
| AGGTTTGAAGCCTTCCATTT+TGG | 0.297680 | 2_1:-12346952 | None:intergenic |
| GGCTGCATCGGCGCGTTGTC+AGG | 0.298075 | 2_1:+12341497 | Msa0195510:CDS |
| CATGTCAACATCACTTATAT+TGG | 0.320229 | 2_1:-12346856 | None:intergenic |
| TTAACCTCGGGTCACGCTTT+CGG | 0.322042 | 2_1:-12341365 | None:intergenic |
| TGGGATTGGGATTGGGATTG+AGG | 0.330701 | 2_1:-12341201 | None:intergenic |
| GCTGAAACACAAGCGAATAT+TGG | 0.331955 | 2_1:+12342463 | Msa0195510:CDS |
| ACGGAGTTGTAGAAGGAAAT+TGG | 0.333246 | 2_1:+12341787 | Msa0195510:CDS |
| CCGAAGATCTCTCCTCCGTT+TGG | 0.333564 | 2_1:+12341250 | Msa0195510:CDS |
| TCGGCGCGTTGTCAGGTTCC+TGG | 0.339982 | 2_1:+12341504 | Msa0195510:CDS |
| TCTAACAAAGCATCGAGTTC+GGG | 0.348406 | 2_1:-12341429 | None:intergenic |
| TAAAAGAAACCCGGCCTGTT+TGG | 0.355695 | 2_1:-12342656 | None:intergenic |
| GCTACTACTGTTGTTCTTGA+TGG | 0.355747 | 2_1:+12341597 | Msa0195510:CDS |
| CTGTAGGTTGAGAATGAGTC+TGG | 0.356081 | 2_1:+12346477 | Msa0195510:intron |
| AATTGATTGGGATTGGGATT+GGG | 0.360219 | 2_1:-12341208 | None:intergenic |
| TCAAAGATATTGCTATTTGT+TGG | 0.367649 | 2_1:+12346752 | Msa0195510:CDS |
| GACTGCCCGCGCGGCTGCAT+CGG | 0.372733 | 2_1:+12341485 | Msa0195510:CDS |
| TCCTAGTTCTCCATCACAAT+TGG | 0.372983 | 2_1:-12341900 | None:intergenic |
| GAATTGATTGGGATTGGGAT+TGG | 0.376980 | 2_1:-12341209 | None:intergenic |
| TCTGGATCAGGGTTAGAGTT+TGG | 0.377437 | 2_1:-12341327 | None:intergenic |
| TAAGAGTGATTATTCGTCTA+TGG | 0.379736 | 2_1:+12342531 | Msa0195510:CDS |
| ACTCTGCATCTGCTCTAAAC+TGG | 0.380253 | 2_1:-12347650 | None:intergenic |
| CGAAGATCTCTCCTCCGTTT+GGG | 0.382192 | 2_1:+12341251 | Msa0195510:CDS |
| GTTGAACAAACACCTTCTAA+TGG | 0.384218 | 2_1:-12347904 | None:intergenic |
| CTAAATAAATAGATGTCATT+AGG | 0.385367 | 2_1:+12347987 | Msa0195510:three_prime_UTR |
| TTCTAACAAAGCATCGAGTT+CGG | 0.397622 | 2_1:-12341430 | None:intergenic |
| ACTTGCTGCGGCCCAAGTTT+CGG | 0.398259 | 2_1:+12343746 | Msa0195510:CDS |
| GGTGGTGGTTAGAAAGTTGT+TGG | 0.399948 | 2_1:-12341125 | None:intergenic |
| AAACAATTTCGGTCTGCATC+TGG | 0.400091 | 2_1:+12346594 | Msa0195510:CDS |
| GAGGGAGAATTGATTGGGAT+TGG | 0.402173 | 2_1:-12341215 | None:intergenic |
| TACCTTCAACCCATAAAATT+GGG | 0.402247 | 2_1:-12348096 | None:intergenic |
| TTAGAAAGTTGTTGGATGTT+TGG | 0.403104 | 2_1:-12341117 | None:intergenic |
| CCAGAGACCCAGAATATTAA+CGG | 0.418853 | 2_1:+12342412 | Msa0195510:CDS |
| CCATTGGAGGGAGAATTGAT+TGG | 0.421524 | 2_1:-12341221 | None:intergenic |
| CATTGGAGGGAGAATTGATT+GGG | 0.421579 | 2_1:-12341220 | None:intergenic |
| GAAAATTACATACCGAAACT+TGG | 0.426287 | 2_1:-12343758 | None:intergenic |
| AGGGAGAATTGATTGGGATT+GGG | 0.426520 | 2_1:-12341214 | None:intergenic |
| TTAGGACAATAGATGTCATT+AGG | 0.430511 | 2_1:+12348005 | Msa0195510:three_prime_UTR |
| CAAACGGAGGAGAGATCTTC+GGG | 0.431075 | 2_1:-12341249 | None:intergenic |
| CTTGCAGTGCCAAACAGGCC+GGG | 0.431911 | 2_1:+12342647 | Msa0195510:intron |
| CTTCCAGATAGCATCTTTCT+GGG | 0.432338 | 2_1:-12343369 | None:intergenic |
| ACCGGTTCTTCTTCATGATC+CGG | 0.435427 | 2_1:-12342370 | None:intergenic |
| GCTCCCAGAAAGATGCTATC+TGG | 0.435998 | 2_1:+12343366 | Msa0195510:CDS |
| ATCTTCAACAACTGATAACT+TGG | 0.440620 | 2_1:-12346997 | None:intergenic |
| AAGGGAAACGGAGTTGTAGA+AGG | 0.440946 | 2_1:+12341780 | Msa0195510:CDS |
| GCTTGCAGTGCCAAACAGGC+CGG | 0.446028 | 2_1:+12342646 | Msa0195510:intron |
| CAATATGAAGGCGACTTAGA+AGG | 0.446383 | 2_1:-12342502 | None:intergenic |
| TTTAGAGCAGATGCAGAGTT+GGG | 0.447298 | 2_1:+12347654 | Msa0195510:CDS |
| CCGTTAATATTCTGGGTCTC+TGG | 0.448445 | 2_1:-12342412 | None:intergenic |
| TTTGGAAGAGGAGGGAGCTG+TGG | 0.449145 | 2_1:-12341309 | None:intergenic |
| CCAAACGGAGGAGAGATCTT+CGG | 0.450370 | 2_1:-12341250 | None:intergenic |
| TTGCAATGCCAAATATTATG+TGG | 0.451793 | 2_1:+12342912 | Msa0195510:CDS |
| AGATCTTCGGGAGGGTCCAT+TGG | 0.455600 | 2_1:-12341237 | None:intergenic |
| ACGCGCCGATGCAGCCGCGC+GGG | 0.456926 | 2_1:-12341490 | None:intergenic |
| GTCCGAGCTCGTTTCTTCCC+TGG | 0.460470 | 2_1:-12341465 | None:intergenic |
| GGGTTAGAGTTTGGAAGAGG+AGG | 0.464452 | 2_1:-12341318 | None:intergenic |
| GCCGGATCATGAAGAAGAAC+CGG | 0.466001 | 2_1:+12342369 | Msa0195510:CDS |
| GATGCTTTGTTAGAAGATAA+CGG | 0.467392 | 2_1:+12341438 | Msa0195510:CDS |
| AGGACGACCATGTTTATTTG+TGG | 0.468432 | 2_1:+12348025 | Msa0195510:three_prime_UTR |
| TCAGGGTTAGAGTTTGGAAG+AGG | 0.468601 | 2_1:-12341321 | None:intergenic |
| ATATATCCCTCTAGCTCTAC+AGG | 0.469152 | 2_1:-12342857 | None:intergenic |
| AGTTGGCAGTATCCATTAGA+AGG | 0.469741 | 2_1:+12347892 | Msa0195510:CDS |
| TGTGATGGAGAACTAGGAAT+AGG | 0.470974 | 2_1:+12341905 | Msa0195510:CDS |
| GTTTAGAGCAGATGCAGAGT+TGG | 0.473139 | 2_1:+12347653 | Msa0195510:CDS |
| CAGACCGAAATTGTTTAGAA+AGG | 0.476881 | 2_1:-12346587 | None:intergenic |
| TTAGAAGATAACGGTTTACC+AGG | 0.484755 | 2_1:+12341447 | Msa0195510:CDS |
| GCTGTCACCGTTAATATTCT+GGG | 0.485620 | 2_1:-12342419 | None:intergenic |
| ATGCTAGAGATGCTATTTGT+CGG | 0.486858 | 2_1:+12346904 | Msa0195510:CDS |
| TGTTGGATGTTTGGCGGAGA+AGG | 0.489529 | 2_1:-12341108 | None:intergenic |
| TGTGTATCTATCTTTCATCA+TGG | 0.489539 | 2_1:+12347858 | Msa0195510:CDS |
| CCTGGGGCCTGCATTTATTG+AGG | 0.489676 | 2_1:+12345653 | Msa0195510:CDS |
| TCATATTGAGGAAAATCTCC+TGG | 0.489818 | 2_1:+12345635 | Msa0195510:CDS |
| AATTGGAGCGGCATAATACT+AGG | 0.491494 | 2_1:+12341804 | Msa0195510:CDS |
| AGGCTATCATCGACGGCATA+GGG | 0.494022 | 2_1:+12341554 | Msa0195510:CDS |
| GTTGACGAACCATTAACAAC+CGG | 0.496044 | 2_1:-12342388 | None:intergenic |
| CGAAGTCGAGGAGGTAAGAT+AGG | 0.500096 | 2_1:-12341275 | None:intergenic |
| AAGGCTATCATCGACGGCAT+AGG | 0.500460 | 2_1:+12341553 | Msa0195510:CDS |
| ATCACTTGTTGTTTGTCTTG+TGG | 0.502076 | 2_1:+12347833 | Msa0195510:CDS |
| CTTTATTCCTGTACTTATTG+GGG | 0.502295 | 2_1:+12346509 | Msa0195510:CDS |
| CATCCCACATGCTTTGAAGC+AGG | 0.502812 | 2_1:+12343691 | Msa0195510:CDS |
| TTTGCAGATATTCCAATGGT+TGG | 0.503021 | 2_1:+12342826 | Msa0195510:intron |
| GAAAGTTGTTGGATGTTTGG+CGG | 0.503320 | 2_1:-12341114 | None:intergenic |
| TCTTTATCCCCAATAAGTAC+AGG | 0.504320 | 2_1:-12346516 | None:intergenic |
| CAGGCATACTTGCCAACCAT+TGG | 0.506762 | 2_1:-12342838 | None:intergenic |
| TATCTATCTTTCATCATGGG+AGG | 0.507164 | 2_1:+12347862 | Msa0195510:CDS |
| TTGTCTTCAGCCGAGTTATG+TGG | 0.515481 | 2_1:-12345567 | None:intergenic |
| TCATGGGAGGGTTAACGAGT+TGG | 0.515866 | 2_1:+12347875 | Msa0195510:CDS |
| TACACATGCCCTTCAGCAGT+TGG | 0.521989 | 2_1:-12346881 | None:intergenic |
| AGGTACGATACGGTGGTGGA+TGG | 0.522499 | 2_1:-12341088 | None:intergenic |
| TCCAATTGTGATGGAGAACT+AGG | 0.524696 | 2_1:+12341899 | Msa0195510:CDS |
| AGTTGTTGAAGATAACAGTC+AGG | 0.525980 | 2_1:+12347007 | Msa0195510:CDS |
| AGCCTTCTTGGAAATTCCGC+AGG | 0.535663 | 2_1:-12342696 | None:intergenic |
| TCTTCGGGAGGGTCCATTGG+AGG | 0.536545 | 2_1:-12341234 | None:intergenic |
| CGGATTTCGATGAAGGGAAA+CGG | 0.538156 | 2_1:+12341768 | Msa0195510:CDS |
| CTAGAGGGATATATCCGCCC+TGG | 0.540836 | 2_1:+12342866 | Msa0195510:CDS |
| TAATACTAGGAGGAGGAGAA+AGG | 0.540952 | 2_1:+12341817 | Msa0195510:CDS |
| ATGATCTTCCGTGTAATGAA+AGG | 0.541427 | 2_1:+12343420 | Msa0195510:CDS |
| AGATCACGCACATAATACAT+AGG | 0.541842 | 2_1:-12343339 | None:intergenic |
| GACGGCATAGGGTTTGTTTG+CGG | 0.543698 | 2_1:+12341565 | Msa0195510:CDS |
| GTGTATCTATCTTTCATCAT+GGG | 0.544893 | 2_1:+12347859 | Msa0195510:CDS |
| ATAACTACCTCAATAAATGC+AGG | 0.551106 | 2_1:-12345660 | None:intergenic |
| GTGACCGTCAAAATCTTACC+AGG | 0.551898 | 2_1:+12347772 | Msa0195510:CDS |
| CATATTGAGGAAAATCTCCT+GGG | 0.554987 | 2_1:+12345636 | Msa0195510:CDS |
| CTCTTATTGTCACAATATGA+AGG | 0.557692 | 2_1:-12342514 | None:intergenic |
| CCAATCAATTCTCCCTCCAA+TGG | 0.558465 | 2_1:+12341221 | Msa0195510:CDS |
| CCTCAATAAATGCAGGCCCC+AGG | 0.559939 | 2_1:-12345653 | None:intergenic |
| AAAAGTCGAGGCAAACATGC+AGG | 0.562694 | 2_1:+12343648 | Msa0195510:CDS |
| TGAAGGCGACTTAGAAGGAT+CGG | 0.563449 | 2_1:-12342497 | None:intergenic |
| CAATATAAGTGATGTTGACA+TGG | 0.564749 | 2_1:+12346857 | Msa0195510:CDS |
| GATATGTGTCCCTCATATTG+AGG | 0.564934 | 2_1:+12345623 | Msa0195510:CDS |
| AAAATTACATACCGAAACTT+GGG | 0.567163 | 2_1:-12343757 | None:intergenic |
| AGAAAGATGCTATCTGGAAG+AGG | 0.569804 | 2_1:+12343372 | Msa0195510:CDS |
| AGCTTAAAGGCTATCATCGA+CGG | 0.570632 | 2_1:+12341547 | Msa0195510:CDS |
| AATGATGATTCCAATTGTGA+TGG | 0.570689 | 2_1:+12341890 | Msa0195510:CDS |
| CTTCGGGAGGGTCCATTGGA+GGG | 0.571070 | 2_1:-12341233 | None:intergenic |
| AAGGCTGTAGATTCTGCAGT+AGG | 0.571229 | 2_1:+12341836 | Msa0195510:CDS |
| GGTACGATACGGTGGTGGAT+GGG | 0.571935 | 2_1:-12341087 | None:intergenic |
| GCTATTTGTCGGAAAGGTGG+AGG | 0.572191 | 2_1:+12346915 | Msa0195510:CDS |
| TTTCCTGCTTCAAAGCATGT+GGG | 0.574026 | 2_1:-12343694 | None:intergenic |
| TACTTGACCCGCGAGAAAGT+TGG | 0.574402 | 2_1:-12341394 | None:intergenic |
| AGAGATGCTATTTGTCGGAA+AGG | 0.576533 | 2_1:+12346909 | Msa0195510:CDS |
| ATCTATCTTTCATCATGGGA+GGG | 0.580834 | 2_1:+12347863 | Msa0195510:CDS |
| ACTTGCTCCAACTTTCTCGC+GGG | 0.581441 | 2_1:+12341387 | Msa0195510:CDS |
| GAATATCGTCGTCGAAGTCG+AGG | 0.582065 | 2_1:-12341287 | None:intergenic |
| TGTTTCAGCAGAAGCAACAA+AGG | 0.585054 | 2_1:-12342449 | None:intergenic |
| CGTTCCGTCTCCACATAACT+CGG | 0.585530 | 2_1:+12345557 | Msa0195510:CDS |
| TCGAGTTCGGGGCATGCACA+TGG | 0.586136 | 2_1:-12341417 | None:intergenic |
| AACGCGCCGATGCAGCCGCG+CGG | 0.589818 | 2_1:-12341491 | None:intergenic |
| AGTTGGAGCAAGTTAACCTC+GGG | 0.590174 | 2_1:-12341377 | None:intergenic |
| GAGGTAAGATAGGTCCCAAA+CGG | 0.591191 | 2_1:-12341265 | None:intergenic |
| ACTTGCTTGTAGATATAGCA+TGG | 0.593375 | 2_1:+12346673 | Msa0195510:CDS |
| AACTTGCTCCAACTTTCTCG+CGG | 0.593749 | 2_1:+12341386 | Msa0195510:CDS |
| GGTTAGAGTTTGGAAGAGGA+GGG | 0.593911 | 2_1:-12341317 | None:intergenic |
| CGGAATTTCCAAGAAGGCTG+CGG | 0.598319 | 2_1:+12342700 | Msa0195510:CDS |
| GATGCTATTTGTCGGAAAGG+TGG | 0.601141 | 2_1:+12346912 | Msa0195510:CDS |
| AAGTATGCCTGTAGAGCTAG+AGG | 0.601194 | 2_1:+12342850 | Msa0195510:CDS |
| CGTAAAGCTTAAAAGAAACC+CGG | 0.601561 | 2_1:-12342665 | None:intergenic |
| GATCACGCACATAATACATA+GGG | 0.602014 | 2_1:-12343338 | None:intergenic |
| TGACATGGACCAACTGCTGA+AGG | 0.605178 | 2_1:+12346872 | Msa0195510:CDS |
| GAGAAGGTACGATACGGTGG+TGG | 0.609125 | 2_1:-12341092 | None:intergenic |
| AGAGATACTGTCAACAGTGT+GGG | 0.614903 | 2_1:+12341628 | Msa0195510:CDS |
| TCGAGATCTCAAGAATCCCC+TGG | 0.617392 | 2_1:-12347790 | None:intergenic |
| CTTTGAAGCAGGAAAACCCA+TGG | 0.618843 | 2_1:+12343702 | Msa0195510:CDS |
| CGGAGGAGAGATCTTCGGGA+GGG | 0.624318 | 2_1:-12341245 | None:intergenic |
| TAGAGGGATATATCCGCCCT+GGG | 0.627129 | 2_1:+12342867 | Msa0195510:CDS |
| AGCGGCATAATACTAGGAGG+AGG | 0.628758 | 2_1:+12341810 | Msa0195510:CDS |
| ATCGTCAGGATCGTACACCC+AGG | 0.629008 | 2_1:-12342884 | None:intergenic |
| TACCAGGGAAGAAACGAGCT+CGG | 0.630387 | 2_1:+12341463 | Msa0195510:CDS |
| AGGCAAACATGCAGGCACCT+AGG | 0.631524 | 2_1:+12343656 | Msa0195510:CDS |
| CTGATCCAGACGAAAACGAT+AGG | 0.631786 | 2_1:+12341340 | Msa0195510:CDS |
| AAGTTGGAGCAAGTTAACCT+CGG | 0.643009 | 2_1:-12341378 | None:intergenic |
| GGATGAATATAGTGAAGCCT+AGG | 0.643635 | 2_1:-12343673 | None:intergenic |
| ATCCTGCGGAATTTCCAAGA+AGG | 0.645595 | 2_1:+12342694 | Msa0195510:CDS |
| ACGAGCTCGGACTGCCCGCG+CGG | 0.648729 | 2_1:+12341476 | Msa0195510:CDS |
| TCAGCCGAGTTATGTGGAGA+CGG | 0.653109 | 2_1:-12345561 | None:intergenic |
| GGTATAATTAGCATGCTGCA+AGG | 0.653848 | 2_1:+12348115 | Msa0195510:three_prime_UTR |
| TTGGCGGAGAAGGTACGATA+CGG | 0.656274 | 2_1:-12341098 | None:intergenic |
| TCGTCAGGATCGTACACCCA+GGG | 0.658661 | 2_1:-12342883 | None:intergenic |
| GCTTTACGACTGGAATCCTG+CGG | 0.658919 | 2_1:+12342680 | Msa0195510:CDS |
| ATCATTCAGATGAATTAGAG+CGG | 0.660105 | 2_1:-12343397 | None:intergenic |
| CTTGTGGAAGTAACTTGCTG+CGG | 0.661577 | 2_1:+12343734 | Msa0195510:CDS |
| CTAACAAAGCATCGAGTTCG+GGG | 0.661782 | 2_1:-12341428 | None:intergenic |
| GTAAGATAGGTCCCAAACGG+AGG | 0.663374 | 2_1:-12341262 | None:intergenic |
| GGATCCGAAAGCGTGACCCG+AGG | 0.668770 | 2_1:+12341361 | Msa0195510:CDS |
| GAAATATCAACTTCACAACC+AGG | 0.671070 | 2_1:-12341522 | None:intergenic |
| AATTTCTGTGACAAAAGTCG+AGG | 0.673573 | 2_1:+12343636 | Msa0195510:CDS |
| GAAACAAACCTTTCATTACA+CGG | 0.677907 | 2_1:-12343428 | None:intergenic |
| TATCGTCGTCGAAGTCGAGG+AGG | 0.681010 | 2_1:-12341284 | None:intergenic |
| AAGAGATACTGTCAACAGTG+TGG | 0.681163 | 2_1:+12341627 | Msa0195510:CDS |
| TTAAAATCCACAAATAAACA+TGG | 0.681347 | 2_1:-12348032 | None:intergenic |
| GACATGGACCAACTGCTGAA+GGG | 0.681962 | 2_1:+12346873 | Msa0195510:CDS |
| GCGGAGAAGGTACGATACGG+TGG | 0.683203 | 2_1:-12341095 | None:intergenic |
| GTTGTAGAAGGAAATTGGAG+CGG | 0.686927 | 2_1:+12341792 | Msa0195510:CDS |
| ACGGAGGAGAGATCTTCGGG+AGG | 0.691526 | 2_1:-12341246 | None:intergenic |
| TGACCGTCAAAATCTTACCA+GGG | 0.692658 | 2_1:+12347773 | Msa0195510:CDS |
| TAGAAGATAACGGTTTACCA+GGG | 0.694372 | 2_1:+12341448 | Msa0195510:CDS |
| GACCGTCAAAATCTTACCAG+GGG | 0.695671 | 2_1:+12347774 | Msa0195510:CDS |
| TGGAGCGGCATAATACTAGG+AGG | 0.705490 | 2_1:+12341807 | Msa0195510:CDS |
| AGTATGCCTGTAGAGCTAGA+GGG | 0.705762 | 2_1:+12342851 | Msa0195510:CDS |
| ATATTGAGGAAAATCTCCTG+GGG | 0.711856 | 2_1:+12345637 | Msa0195510:CDS |
| TCAGGATCGTACACCCAGGG+CGG | 0.738843 | 2_1:-12342880 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAATTTAAGAGTAATTT+TGG | + | chr2_1:12344484-12344503 | Msa0195510:intron | 10.0% |
| !! | TAATACGATATTTATTATAA+AGG | + | chr2_1:12345102-12345121 | Msa0195510:intron | 10.0% |
| !! | AAATTTAATCAATTTAATCA+AGG | - | chr2_1:12346374-12346393 | None:intergenic | 10.0% |
| !!! | TTTGTTTTTTCATTTTTCTA+CGG | - | chr2_1:12341058-12341077 | None:intergenic | 15.0% |
| !!! | ATAAAATGCTTTAAAATACT+TGG | - | chr2_1:12342728-12342747 | None:intergenic | 15.0% |
| !!! | ATTTGTATACTTCTTATTTT+TGG | + | chr2_1:12343457-12343476 | Msa0195510:intron | 15.0% |
| !! | AAAAACAACTCAAATAATTT+AGG | - | chr2_1:12343494-12343513 | None:intergenic | 15.0% |
| !! | CTATAACTAAAAATAACAAA+AGG | - | chr2_1:12343549-12343568 | None:intergenic | 15.0% |
| !!! | CTTTTGTTATTTTTAGTTAT+AGG | + | chr2_1:12343547-12343566 | Msa0195510:intron | 15.0% |
| !!! | TTTTGTTTTTATATTTAAGG+TGG | - | chr2_1:12344213-12344232 | None:intergenic | 15.0% |
| !! | ACCTTAAATATAAAAACAAA+AGG | + | chr2_1:12344212-12344231 | Msa0195510:intron | 15.0% |
| !!! | TCCTTTTGTTTTTATATTTA+AGG | - | chr2_1:12344216-12344235 | None:intergenic | 15.0% |
| !! | AAATATAAAAACAAAAGGAA+TGG | + | chr2_1:12344217-12344236 | Msa0195510:intron | 15.0% |
| !! | ATTAAGAAAATTGGTTAATT+TGG | - | chr2_1:12344549-12344568 | None:intergenic | 15.0% |
| !! | TTTAAACAGATTAAGAAAAT+TGG | - | chr2_1:12344558-12344577 | None:intergenic | 15.0% |
| !! | AATCTGTTTAAATTTATCAA+AGG | + | chr2_1:12344566-12344585 | Msa0195510:intron | 15.0% |
| !! | ATCTGTTTAAATTTATCAAA+GGG | + | chr2_1:12344567-12344586 | Msa0195510:intron | 15.0% |
| !! | AATACACTTCATAAATTAAT+TGG | - | chr2_1:12344635-12344654 | None:intergenic | 15.0% |
| !! | ATAAAATATATAGTACCTAA+GGG | - | chr2_1:12344714-12344733 | None:intergenic | 15.0% |
| !! | AATAAAATATATAGTACCTA+AGG | - | chr2_1:12344715-12344734 | None:intergenic | 15.0% |
| !!! | TTAGGTACTATATATTTTAT+TGG | + | chr2_1:12344714-12344733 | Msa0195510:intron | 15.0% |
| !!! | TAGGTACTATATATTTTATT+GGG | + | chr2_1:12344715-12344734 | Msa0195510:intron | 15.0% |
| !!! | AAATATGATACTTTCTTTTT+TGG | - | chr2_1:12345421-12345440 | None:intergenic | 15.0% |
| !! | CAAATTAAACTAAATACTTA+AGG | - | chr2_1:12345939-12345958 | None:intergenic | 15.0% |
| !!! | CTTAAGTATTTAGTTTAATT+TGG | + | chr2_1:12345937-12345956 | Msa0195510:intron | 15.0% |
| !!! | ATAAACTGTTTTTATCAAAA+TGG | + | chr2_1:12346399-12346418 | Msa0195510:intron | 15.0% |
| !! | TTAATTAATGACATTATCAT+GGG | - | chr2_1:12347061-12347080 | None:intergenic | 15.0% |
| !! | ATTAATTAATGACATTATCA+TGG | - | chr2_1:12347062-12347081 | None:intergenic | 15.0% |
| !! | AAAGGATATTATAATGAATA+TGG | + | chr2_1:12347731-12347750 | Msa0195510:CDS | 15.0% |
| !! | AATATTGAAAAATTTGTCAA+TGG | - | chr2_1:12347929-12347948 | None:intergenic | 15.0% |
| !!! | TAATACATTTTGTTCATTTT+TGG | + | chr2_1:12348152-12348171 | Msa0195510:three_prime_UTR | 15.0% |
| !!! | ATGTAGATTTCATGTTTTAT+CGG | + | chr2_1:12341748-12341767 | Msa0195510:intron | 20.0% |
| !!! | ATTCTAATTTAATTTCCATG+TGG | + | chr2_1:12342276-12342295 | Msa0195510:intron | 20.0% |
| !! | ACATTTATCCACATAATATT+TGG | - | chr2_1:12342923-12342942 | None:intergenic | 20.0% |
| !! | AAACTAAATACTTGAAAACA+GGG | - | chr2_1:12343226-12343245 | None:intergenic | 20.0% |
| !! | AAAACTAAATACTTGAAAAC+AGG | - | chr2_1:12343227-12343246 | None:intergenic | 20.0% |
| !!! | TAAGAAGTATACAAATGAAA+CGG | - | chr2_1:12343453-12343472 | None:intergenic | 20.0% |
| !!! | AATTATTTGAGTTGTTTTTC+TGG | + | chr2_1:12343495-12343514 | Msa0195510:intron | 20.0% |
| !!! | TATATTTCATTGATTACAGA+TGG | + | chr2_1:12343613-12343632 | Msa0195510:intron | 20.0% |
| !!! | TGAACATAGTTAATTTGTAT+CGG | - | chr2_1:12344430-12344449 | None:intergenic | 20.0% |
| !!! | AGGTACTATATATTTTATTG+GGG | + | chr2_1:12344716-12344735 | Msa0195510:intron | 20.0% |
| !! | CATATAAAACTTCAAGTAAA+AGG | + | chr2_1:12344880-12344899 | Msa0195510:intron | 20.0% |
| !!! | CGTAGCTATATATTTTATTT+AGG | + | chr2_1:12344949-12344968 | Msa0195510:intron | 20.0% |
| !! | CTATCATTATGATATGATAT+GGG | - | chr2_1:12345002-12345021 | None:intergenic | 20.0% |
| !! | CCAAAAAAGATTATAACAAA+AGG | - | chr2_1:12345044-12345063 | None:intergenic | 20.0% |
| !!! | CCTTTTGTTATAATCTTTTT+TGG | + | chr2_1:12345041-12345060 | Msa0195510:intron | 20.0% |
| !! | AAAAGAAAACATACAAGTAT+TGG | - | chr2_1:12345782-12345801 | None:intergenic | 20.0% |
| !! | CTAAAAAATCAAACAAATTG+AGG | + | chr2_1:12345875-12345894 | Msa0195510:intron | 20.0% |
| !! | GGATTTGTATTATAAAATTG+TGG | + | chr2_1:12346219-12346238 | Msa0195510:intron | 20.0% |
| !! | TGTATTATAAAATTGTGGTT+TGG | + | chr2_1:12346224-12346243 | Msa0195510:intron | 20.0% |
| !! | AAACAAAGAAAAATATGAAG+TGG | - | chr2_1:12346438-12346457 | None:intergenic | 20.0% |
| !!! | AATGATTCAACTATCATTTT+GGG | + | chr2_1:12346789-12346808 | Msa0195510:CDS | 20.0% |
| !!! | TTTGTTATGCTTATCAAATT+TGG | - | chr2_1:12346825-12346844 | None:intergenic | 20.0% |
| !! | ACAAAAAAAATAACGAATTG+AGG | - | chr2_1:12347356-12347375 | None:intergenic | 20.0% |
| !!! | TATCTTCTGATTTTTTTCAT+CGG | - | chr2_1:12347700-12347719 | None:intergenic | 20.0% |
| !!! | ATAATATCCTTTTTCAAAAG+CGG | - | chr2_1:12347723-12347742 | None:intergenic | 20.0% |
| !!! | ATTTTTGTACTTATTGTGTT+TGG | + | chr2_1:12347946-12347965 | Msa0195510:three_prime_UTR | 20.0% |
| !! | CTAAATAAATAGATGTCATT+AGG | + | chr2_1:12347987-12348006 | Msa0195510:three_prime_UTR | 20.0% |
| !! | TTAAAATCCACAAATAAACA+TGG | - | chr2_1:12348035-12348054 | None:intergenic | 20.0% |
| !!! | TAATTATGAACCCAATTTTA+TGG | + | chr2_1:12348086-12348105 | Msa0195510:three_prime_UTR | 20.0% |
| !!! | AATTATGAACCCAATTTTAT+GGG | + | chr2_1:12348087-12348106 | Msa0195510:three_prime_UTR | 20.0% |
| !!! | TTTTTCATTTTTCTACGGTA+GGG | - | chr2_1:12341053-12341072 | None:intergenic | 25.0% |
| !!! | TTTTTTCATTTTTCTACGGT+AGG | - | chr2_1:12341054-12341073 | None:intergenic | 25.0% |
| !!! | GCTTTTTTCATAATCTCAAA+TGG | + | chr2_1:12341170-12341189 | Msa0195510:exon | 25.0% |
| !! | TTTATGATGATGATGTTGAT+TGG | + | chr2_1:12341708-12341727 | Msa0195510:intron | 25.0% |
| !! | TTATGATGATGATGTTGATT+GGG | + | chr2_1:12341709-12341728 | Msa0195510:intron | 25.0% |
| !! | AGTATCACACTCTTATTTAT+TGG | + | chr2_1:12341951-12341970 | Msa0195510:intron | 25.0% |
| ! | ACAAGACAAATAAAGTCAAA+CGG | - | chr2_1:12342118-12342137 | None:intergenic | 25.0% |
| !!! | TTCTTTCACGTGTTTATTTT+TGG | + | chr2_1:12342584-12342603 | Msa0195510:intron | 25.0% |
| ! | AAGAATGCTTTCTTATTACA+CGG | + | chr2_1:12343010-12343029 | Msa0195510:intron | 25.0% |
| !! | TAGTTTTTACTGAATCTGAT+TGG | + | chr2_1:12343240-12343259 | Msa0195510:intron | 25.0% |
| ! | AGAAAGAGGAAGAAAAAATA+TGG | - | chr2_1:12343267-12343286 | None:intergenic | 25.0% |
| ! | AAAATTACATACCGAAACTT+GGG | - | chr2_1:12343760-12343779 | None:intergenic | 25.0% |
| ! | CTTTAAATGATGTTTAGAAG+AGG | - | chr2_1:12343785-12343804 | None:intergenic | 25.0% |
| ! | CAAATAAATATGCTTATGTC+TGG | - | chr2_1:12343830-12343849 | None:intergenic | 25.0% |
| ! | ATAATATATTTGCCAGTGTT+GGG | + | chr2_1:12343860-12343879 | Msa0195510:intron | 25.0% |
| !! | AAAATACACTTAGGTTGTAA+GGG | + | chr2_1:12343898-12343917 | Msa0195510:intron | 25.0% |
| ! | TGGAAAATCATAGTTAAACA+TGG | - | chr2_1:12344087-12344106 | None:intergenic | 25.0% |
| ! | TATAAAAACAAAAGGAATGG+AGG | + | chr2_1:12344220-12344239 | Msa0195510:intron | 25.0% |
| ! | ATAAAAACAAAAGGAATGGA+GGG | + | chr2_1:12344221-12344240 | Msa0195510:intron | 25.0% |
| !! | AGTTAGAATTGTTTTCAGAA+GGG | - | chr2_1:12344314-12344333 | None:intergenic | 25.0% |
| !! | AAGTTAGAATTGTTTTCAGA+AGG | - | chr2_1:12344315-12344334 | None:intergenic | 25.0% |
| !!! | AAATTGGTTAATTTGGTTTG+CGG | - | chr2_1:12344542-12344561 | None:intergenic | 25.0% |
| ! | CATTACTTGAACTAAATACT+AGG | + | chr2_1:12344749-12344768 | Msa0195510:intron | 25.0% |
| ! | GCTATCATTATGATATGATA+TGG | - | chr2_1:12345003-12345022 | None:intergenic | 25.0% |
| ! | ATCATATCATAATGATAGCA+CGG | + | chr2_1:12345004-12345023 | Msa0195510:intron | 25.0% |
| !! | ACTCTGATCTTAGTAAATTT+TGG | + | chr2_1:12345068-12345087 | Msa0195510:intron | 25.0% |
| !! | CTCTGATCTTAGTAAATTTT+GGG | + | chr2_1:12345069-12345088 | Msa0195510:intron | 25.0% |
| !!! | TTTTTTGAATAAGCCAAACT+AGG | - | chr2_1:12345228-12345247 | None:intergenic | 25.0% |
| !!! | TATTCAGCTAGTTTAGATTT+TGG | + | chr2_1:12345440-12345459 | Msa0195510:intron | 25.0% |
| ! | GAATGAACTGTTAAATTATC+AGG | - | chr2_1:12345856-12345875 | None:intergenic | 25.0% |
| !!! | ATTTTGCACTGATATCTTAT+TGG | + | chr2_1:12346100-12346119 | Msa0195510:intron | 25.0% |
| ! | CCAAAATCACATCAAATAAA+AGG | - | chr2_1:12346338-12346357 | None:intergenic | 25.0% |
| !!! | CCTTTTATTTGATGTGATTT+TGG | + | chr2_1:12346335-12346354 | Msa0195510:intron | 25.0% |
| !! | TTTATTTGATGTGATTTTGG+AGG | + | chr2_1:12346338-12346357 | Msa0195510:intron | 25.0% |
| ! | AACTTTATTCCTGTACTTAT+TGG | + | chr2_1:12346507-12346526 | Msa0195510:CDS | 25.0% |
| ! | ACTTTATTCCTGTACTTATT+GGG | + | chr2_1:12346508-12346527 | Msa0195510:CDS | 25.0% |
| !! | TTCAGAAATTTTTGACAGAA+TGG | + | chr2_1:12346713-12346732 | Msa0195510:CDS | 25.0% |
| !!! | TCAAAGATATTGCTATTTGT+TGG | + | chr2_1:12346752-12346771 | Msa0195510:CDS | 25.0% |
| !! | CAATGATTCAACTATCATTT+TGG | + | chr2_1:12346788-12346807 | Msa0195510:CDS | 25.0% |
| !!! | TATAGTTTTGAACTCCAAAA+TGG | + | chr2_1:12346938-12346957 | Msa0195510:CDS | 25.0% |
| ! | AATCGAAAATAAAACCTAGT+GGG | + | chr2_1:12347146-12347165 | Msa0195510:intron | 25.0% |
| ! | ATGTCAACTATAGATATGTA+AGG | + | chr2_1:12347179-12347198 | Msa0195510:intron | 25.0% |
| ! | AAAAATAACGAATTGAGGAT+AGG | - | chr2_1:12347351-12347370 | None:intergenic | 25.0% |
| ! | AAAAATATATGTGGAAGGAA+TGG | - | chr2_1:12347392-12347411 | None:intergenic | 25.0% |
| ! | TCTTGAGCTAAAAATATATG+TGG | - | chr2_1:12347401-12347420 | None:intergenic | 25.0% |
| !! | GGATTTTAAATTTAGATGTC+AGG | + | chr2_1:12348046-12348065 | Msa0195510:three_prime_UTR | 25.0% |
| TTAGAAAGTTGTTGGATGTT+TGG | - | chr2_1:12341120-12341139 | None:intergenic | 30.0% | |
| TTGAGATTATGAAAAAAGCG+CGG | - | chr2_1:12341169-12341188 | None:intergenic | 30.0% | |
| ! | GATGCTTTGTTAGAAGATAA+CGG | + | chr2_1:12341438-12341457 | Msa0195510:CDS | 30.0% |
| ! | GTTGATATTTCTGAGCTTAA+AGG | + | chr2_1:12341534-12341553 | Msa0195510:CDS | 30.0% |
| ! | TATGATGATGATGTTGATTG+GGG | + | chr2_1:12341710-12341729 | Msa0195510:intron | 30.0% |
| ! | TTTTATCGGATTTCGATGAA+GGG | + | chr2_1:12341762-12341781 | Msa0195510:CDS | 30.0% |
| AATGATGATTCCAATTGTGA+TGG | + | chr2_1:12341890-12341909 | Msa0195510:CDS | 30.0% | |
| GCGTATAAAATGATGTTCAT+AGG | + | chr2_1:12342023-12342042 | Msa0195510:intron | 30.0% | |
| AATAAACTGTTTGTGCAAAC+AGG | + | chr2_1:12342182-12342201 | Msa0195510:intron | 30.0% | |
| ATAAACTGTTTGTGCAAACA+GGG | + | chr2_1:12342183-12342202 | Msa0195510:intron | 30.0% | |
| ! | TTAATTTCCATGTGGCTTTA+TGG | + | chr2_1:12342284-12342303 | Msa0195510:intron | 30.0% |
| CTCTTATTGTCACAATATGA+AGG | - | chr2_1:12342517-12342536 | None:intergenic | 30.0% | |
| TAAGAGTGATTATTCGTCTA+TGG | + | chr2_1:12342531-12342550 | Msa0195510:CDS | 30.0% | |
| ! | TTTCTTTTAAGCTTTACGAC+TGG | + | chr2_1:12342670-12342689 | Msa0195510:CDS | 30.0% |
| ACAGTTTAGTATTTCGATTG+TGG | + | chr2_1:12342749-12342768 | Msa0195510:intron | 30.0% | |
| !! | TGTTTTTGCAGATATTCCAA+TGG | + | chr2_1:12342822-12342841 | Msa0195510:intron | 30.0% |
| TTGCAATGCCAAATATTATG+TGG | + | chr2_1:12342912-12342931 | Msa0195510:CDS | 30.0% | |
| ! | AAGCATTCTTTTTACCTAAC+AGG | - | chr2_1:12343000-12343019 | None:intergenic | 30.0% |
| AGAATGCTTTCTTATTACAC+GGG | + | chr2_1:12343011-12343030 | Msa0195510:intron | 30.0% | |
| GAACCATAAAGTCTAATACA+GGG | - | chr2_1:12343044-12343063 | None:intergenic | 30.0% | |
| AGAACCATAAAGTCTAATAC+AGG | - | chr2_1:12343045-12343064 | None:intergenic | 30.0% | |
| TGAAGTCAAAAATCAGAAAG+AGG | - | chr2_1:12343281-12343300 | None:intergenic | 30.0% | |
| ATCATTCAGATGAATTAGAG+CGG | - | chr2_1:12343400-12343419 | None:intergenic | 30.0% | |
| GAAACAAACCTTTCATTACA+CGG | - | chr2_1:12343431-12343450 | None:intergenic | 30.0% | |
| GAAAATTACATACCGAAACT+TGG | - | chr2_1:12343761-12343780 | None:intergenic | 30.0% | |
| CATAATATATTTGCCAGTGT+TGG | + | chr2_1:12343859-12343878 | Msa0195510:intron | 30.0% | |
| TAATATATTTGCCAGTGTTG+GGG | + | chr2_1:12343861-12343880 | Msa0195510:intron | 30.0% | |
| ! | AGTGTATTTTCCCTTACATT+AGG | - | chr2_1:12343888-12343907 | None:intergenic | 30.0% |
| ATGTAAGGGAAAATACACTT+AGG | + | chr2_1:12343889-12343908 | Msa0195510:intron | 30.0% | |
| ! | GAAAATACACTTAGGTTGTA+AGG | + | chr2_1:12343897-12343916 | Msa0195510:intron | 30.0% |
| TGTTCGTATTATTCCTGAAA+TGG | + | chr2_1:12344007-12344026 | Msa0195510:intron | 30.0% | |
| CACTGTAATATTTCCATTTC+AGG | - | chr2_1:12344023-12344042 | None:intergenic | 30.0% | |
| CTGAAATGGAAATATTACAG+TGG | + | chr2_1:12344021-12344040 | Msa0195510:intron | 30.0% | |
| AGAGAGAAATGAACTAACTA+CGG | - | chr2_1:12344369-12344388 | None:intergenic | 30.0% | |
| !! | ACATAGTTAATTTGTATCGG+TGG | - | chr2_1:12344427-12344446 | None:intergenic | 30.0% |
| ! | ATCAAAGGGTCTTATATACA+AGG | + | chr2_1:12344581-12344600 | Msa0195510:intron | 30.0% |
| ACTTATTGACATGTTACCTT+AGG | - | chr2_1:12344688-12344707 | None:intergenic | 30.0% | |
| ATGTCAATAAGTATACCCTT+AGG | + | chr2_1:12344696-12344715 | Msa0195510:intron | 30.0% | |
| ! | TTATAAAGGCATAAACCACT+TGG | + | chr2_1:12345116-12345135 | Msa0195510:intron | 30.0% |
| ! | TATAAAGGCATAAACCACTT+GGG | + | chr2_1:12345117-12345136 | Msa0195510:intron | 30.0% |
| !!! | CTTTCTTTTTTGGTGTACAA+CGG | - | chr2_1:12345411-12345430 | None:intergenic | 30.0% |
| ! | AGGCTTCTTGTATCTTTTTA+TGG | + | chr2_1:12345510-12345529 | Msa0195510:intron | 30.0% |
| ATAACTACCTCAATAAATGC+AGG | - | chr2_1:12345663-12345682 | None:intergenic | 30.0% | |
| AAACAGGAAATTAGAAATGG+AGG | - | chr2_1:12345717-12345736 | None:intergenic | 30.0% | |
| AGCAAACAGGAAATTAGAAA+TGG | - | chr2_1:12345720-12345739 | None:intergenic | 30.0% | |
| TGATATGAAACATAGCAAAC+AGG | - | chr2_1:12345733-12345752 | None:intergenic | 30.0% | |
| TGTTAAATTATCAGGTCATG+CGG | - | chr2_1:12345848-12345867 | None:intergenic | 30.0% | |
| AGGAACACTGAAACTTTAAT+GGG | + | chr2_1:12345895-12345914 | Msa0195510:intron | 30.0% | |
| TACGAGGATATGCTAAAATT+TGG | - | chr2_1:12346060-12346079 | None:intergenic | 30.0% | |
| AACCTGTTATCTTAAGCAAA+TGG | + | chr2_1:12346135-12346154 | Msa0195510:intron | 30.0% | |
| ACCTGTTATCTTAAGCAAAT+GGG | + | chr2_1:12346136-12346155 | Msa0195510:intron | 30.0% | |
| AAGCAAATGGGATTTATCTA+AGG | + | chr2_1:12346148-12346167 | Msa0195510:intron | 30.0% | |
| ATCATGGAAACTTTCGAATT+TGG | + | chr2_1:12346197-12346216 | Msa0195510:intron | 30.0% | |
| TCATGGAAACTTTCGAATTT+GGG | + | chr2_1:12346198-12346217 | Msa0195510:intron | 30.0% | |
| TCACATCAAATAAAAGGTTC+AGG | - | chr2_1:12346332-12346351 | None:intergenic | 30.0% | |
| CTTTATTCCTGTACTTATTG+GGG | + | chr2_1:12346509-12346528 | Msa0195510:CDS | 30.0% | |
| CTCTCCTTTCTAAACAATTT+CGG | + | chr2_1:12346583-12346602 | Msa0195510:CDS | 30.0% | |
| !! | TGTCAAAAATTTCTGAAGTC+GGG | - | chr2_1:12346710-12346729 | None:intergenic | 30.0% |
| !! | CTGTCAAAAATTTCTGAAGT+CGG | - | chr2_1:12346711-12346730 | None:intergenic | 30.0% |
| CATGTCAACATCACTTATAT+TGG | - | chr2_1:12346859-12346878 | None:intergenic | 30.0% | |
| CAATATAAGTGATGTTGACA+TGG | + | chr2_1:12346857-12346876 | Msa0195510:CDS | 30.0% | |
| ATCTTCAACAACTGATAACT+TGG | - | chr2_1:12347000-12347019 | None:intergenic | 30.0% | |
| CAATCGAAAATAAAACCTAG+TGG | + | chr2_1:12347145-12347164 | Msa0195510:intron | 30.0% | |
| CTATAGTTGACATAAATGCA+CGG | - | chr2_1:12347172-12347191 | None:intergenic | 30.0% | |
| GAGCTAAAAATATATGTGGA+AGG | - | chr2_1:12347397-12347416 | None:intergenic | 30.0% | |
| ! | ACTATTGACTAAGTTTCTCT+CGG | + | chr2_1:12347432-12347451 | Msa0195510:intron | 30.0% |
| TCATTTAGTAAACTCTGCTT+TGG | + | chr2_1:12347497-12347516 | Msa0195510:intron | 30.0% | |
| !!! | TACATTGATTTTTGCTTTGC+AGG | + | chr2_1:12347623-12347642 | Msa0195510:intron | 30.0% |
| !!! | ACATTGATTTTTGCTTTGCA+GGG | + | chr2_1:12347624-12347643 | Msa0195510:intron | 30.0% |
| GATACAAGCACAAAAATAGT+TGG | - | chr2_1:12347816-12347835 | None:intergenic | 30.0% | |
| TGTGTATCTATCTTTCATCA+TGG | + | chr2_1:12347858-12347877 | Msa0195510:CDS | 30.0% | |
| GTGTATCTATCTTTCATCAT+GGG | + | chr2_1:12347859-12347878 | Msa0195510:CDS | 30.0% | |
| TTAGGACAATAGATGTCATT+AGG | + | chr2_1:12348005-12348024 | Msa0195510:three_prime_UTR | 30.0% | |
| GATGTCAGGTAAAAATCAAA+AGG | + | chr2_1:12348060-12348079 | Msa0195510:three_prime_UTR | 30.0% | |
| TACCTTCAACCCATAAAATT+GGG | - | chr2_1:12348099-12348118 | None:intergenic | 30.0% | |
| ATACCTTCAACCCATAAAAT+TGG | - | chr2_1:12348100-12348119 | None:intergenic | 30.0% | |
| AATTGATTGGGATTGGGATT+GGG | - | chr2_1:12341211-12341230 | None:intergenic | 35.0% | |
| !! | TTCTAACAAAGCATCGAGTT+CGG | - | chr2_1:12341433-12341452 | None:intergenic | 35.0% |
| ! | TTAGAAGATAACGGTTTACC+AGG | + | chr2_1:12341447-12341466 | Msa0195510:CDS | 35.0% |
| ! | TAGAAGATAACGGTTTACCA+GGG | + | chr2_1:12341448-12341467 | Msa0195510:CDS | 35.0% |
| GAAATATCAACTTCACAACC+AGG | - | chr2_1:12341525-12341544 | None:intergenic | 35.0% | |
| ! | GTTTTATCGGATTTCGATGA+AGG | + | chr2_1:12341761-12341780 | Msa0195510:CDS | 35.0% |
| ! | TGTTTTCAGCTTATTTCCGT+CGG | + | chr2_1:12342047-12342066 | Msa0195510:intron | 35.0% |
| !! | TATCGAAAAAAGAGTGTTGC+CGG | + | chr2_1:12342351-12342370 | Msa0195510:CDS | 35.0% |
| AGTGATTATTCGTCTATGGT+AGG | + | chr2_1:12342535-12342554 | Msa0195510:intron | 35.0% | |
| !!! | ATTTTTGGTGCGAGAAATTG+TGG | + | chr2_1:12342599-12342618 | Msa0195510:intron | 35.0% |
| CGTAAAGCTTAAAAGAAACC+CGG | - | chr2_1:12342668-12342687 | None:intergenic | 35.0% | |
| ATCAGTCACTAACATGTAGA+TGG | - | chr2_1:12342787-12342806 | None:intergenic | 35.0% | |
| TTTGCAGATATTCCAATGGT+TGG | + | chr2_1:12342826-12342845 | Msa0195510:intron | 35.0% | |
| GCATTGCAATAAAAATCGTC+AGG | - | chr2_1:12342901-12342920 | None:intergenic | 35.0% | |
| ! | CTTTGTTATGCTCATTCTCA+TGG | + | chr2_1:12343063-12343082 | Msa0195510:intron | 35.0% |
| ACTTCATCTTGTCTCTCTTA+TGG | + | chr2_1:12343295-12343314 | Msa0195510:intron | 35.0% | |
| GATCACGCACATAATACATA+GGG | - | chr2_1:12343341-12343360 | None:intergenic | 35.0% | |
| AGATCACGCACATAATACAT+AGG | - | chr2_1:12343342-12343361 | None:intergenic | 35.0% | |
| ATGATCTTCCGTGTAATGAA+AGG | + | chr2_1:12343420-12343439 | Msa0195510:CDS | 35.0% | |
| !!! | AGCATTTTAGAACCTGATTC+AGG | + | chr2_1:12343521-12343540 | Msa0195510:intron | 35.0% |
| TAACAAAAGGAACCTGAATC+AGG | - | chr2_1:12343536-12343555 | None:intergenic | 35.0% | |
| ! | TTATAGGCTTCAAGTTCTGA+GGG | + | chr2_1:12343563-12343582 | Msa0195510:intron | 35.0% |
| AATTTCTGTGACAAAAGTCG+AGG | + | chr2_1:12343636-12343655 | Msa0195510:CDS | 35.0% | |
| CTCTATTAATTGCCTTTGTG+TGG | - | chr2_1:12343965-12343984 | None:intergenic | 35.0% | |
| !! | GTAGTAAGAGAAAGGTATCT+TGG | - | chr2_1:12344107-12344126 | None:intergenic | 35.0% |
| TAGAGGGCTTCTAATATATG+GGG | - | chr2_1:12344136-12344155 | None:intergenic | 35.0% | |
| GTAGAGGGCTTCTAATATAT+GGG | - | chr2_1:12344137-12344156 | None:intergenic | 35.0% | |
| TTCAGAAGGGTCTCATATTT+AGG | - | chr2_1:12344301-12344320 | None:intergenic | 35.0% | |
| TGAACTAACTACGGGTATTA+TGG | - | chr2_1:12344360-12344379 | None:intergenic | 35.0% | |
| GAGAGAAATGAACTAACTAC+GGG | - | chr2_1:12344368-12344387 | None:intergenic | 35.0% | |
| TTAACTCCAGATAGGACAAT+TGG | - | chr2_1:12344795-12344814 | None:intergenic | 35.0% | |
| ! | TAGGAATTGACCTTCCTTTT+AGG | + | chr2_1:12344968-12344987 | Msa0195510:intron | 35.0% |
| TATGGGAATGCAAACCTAAA+AGG | - | chr2_1:12344985-12345004 | None:intergenic | 35.0% | |
| ATAATGATAGCACGGTTTAG+TGG | + | chr2_1:12345012-12345031 | Msa0195510:intron | 35.0% | |
| TAATGATAGCACGGTTTAGT+GGG | + | chr2_1:12345013-12345032 | Msa0195510:intron | 35.0% | |
| TTTGTTGAAGCCACTAGAAT+TGG | + | chr2_1:12345330-12345349 | Msa0195510:intron | 35.0% | |
| CTGTAATGAGGTGATAATCA+TGG | + | chr2_1:12345486-12345505 | Msa0195510:intron | 35.0% | |
| ! | GGAGATTTTCCTCAATATGA+GGG | - | chr2_1:12345635-12345654 | None:intergenic | 35.0% |
| ! | AGGAGATTTTCCTCAATATG+AGG | - | chr2_1:12345636-12345655 | None:intergenic | 35.0% |
| TCATATTGAGGAAAATCTCC+TGG | + | chr2_1:12345635-12345654 | Msa0195510:CDS | 35.0% | |
| CATATTGAGGAAAATCTCCT+GGG | + | chr2_1:12345636-12345655 | Msa0195510:CDS | 35.0% | |
| ATATTGAGGAAAATCTCCTG+GGG | + | chr2_1:12345637-12345656 | Msa0195510:CDS | 35.0% | |
| GAGGAACACTGAAACTTTAA+TGG | + | chr2_1:12345894-12345913 | Msa0195510:intron | 35.0% | |
| !!! | TTTGGATGTGTCATTTTCGT+TGG | + | chr2_1:12345955-12345974 | Msa0195510:intron | 35.0% |
| ATCAGTGCAAAATTCGATAC+CGG | - | chr2_1:12346093-12346112 | None:intergenic | 35.0% | |
| TCCCATTTGCTTAAGATAAC+AGG | - | chr2_1:12346140-12346159 | None:intergenic | 35.0% | |
| ACTAAGAGCTGTAGTTATCA+TGG | + | chr2_1:12346181-12346200 | Msa0195510:intron | 35.0% | |
| CATACTTCTTTCCTTTCTGT+AGG | + | chr2_1:12346461-12346480 | Msa0195510:intron | 35.0% | |
| TCTTTATCCCCAATAAGTAC+AGG | - | chr2_1:12346519-12346538 | None:intergenic | 35.0% | |
| CAGACCGAAATTGTTTAGAA+AGG | - | chr2_1:12346590-12346609 | None:intergenic | 35.0% | |
| ACTTGCTTGTAGATATAGCA+TGG | + | chr2_1:12346673-12346692 | Msa0195510:CDS | 35.0% | |
| ! | ATGCTAGAGATGCTATTTGT+CGG | + | chr2_1:12346904-12346923 | Msa0195510:CDS | 35.0% |
| !! | GTTTTGAACTCCAAAATGGA+AGG | + | chr2_1:12346942-12346961 | Msa0195510:CDS | 35.0% |
| ! | AACTGATAACTTGGCGTTTT+GGG | - | chr2_1:12346991-12347010 | None:intergenic | 35.0% |
| AGTTGTTGAAGATAACAGTC+AGG | + | chr2_1:12347007-12347026 | Msa0195510:CDS | 35.0% | |
| GGCAATGTGAATGAAATTGT+TGG | + | chr2_1:12347229-12347248 | Msa0195510:intron | 35.0% | |
| AGGAAGTAGTGTAACAAGTT+TGG | - | chr2_1:12347331-12347350 | None:intergenic | 35.0% | |
| CTAAGTTTCTCTCGGAAAAA+TGG | + | chr2_1:12347440-12347459 | Msa0195510:intron | 35.0% | |
| TGGAATTTCCATGGAAAAGA+TGG | + | chr2_1:12347541-12347560 | Msa0195510:intron | 35.0% | |
| GTCAATCCAACTAGGATTTA+CGG | - | chr2_1:12347588-12347607 | None:intergenic | 35.0% | |
| AGAAACATGTCAATCCAACT+AGG | - | chr2_1:12347596-12347615 | None:intergenic | 35.0% | |
| !! | GAAGATACCGCTTTTGAAAA+AGG | + | chr2_1:12347713-12347732 | Msa0195510:CDS | 35.0% |
| ! | TTTTGACGGTCACATCTTTT+AGG | - | chr2_1:12347765-12347784 | None:intergenic | 35.0% |
| !! | ATCACTTGTTGTTTGTCTTG+TGG | + | chr2_1:12347833-12347852 | Msa0195510:CDS | 35.0% |
| TATCTATCTTTCATCATGGG+AGG | + | chr2_1:12347862-12347881 | Msa0195510:CDS | 35.0% | |
| ATCTATCTTTCATCATGGGA+GGG | + | chr2_1:12347863-12347882 | Msa0195510:CDS | 35.0% | |
| GTTGAACAAACACCTTCTAA+TGG | - | chr2_1:12347907-12347926 | None:intergenic | 35.0% | |
| !! | AACCCAATTTTATGGGTTGA+AGG | + | chr2_1:12348094-12348113 | Msa0195510:three_prime_UTR | 35.0% |
| GAAAGTTGTTGGATGTTTGG+CGG | - | chr2_1:12341117-12341136 | None:intergenic | 40.0% | |
| !! | TTGGAATAAGCGCTTTTTGG+TGG | - | chr2_1:12341146-12341165 | None:intergenic | 40.0% |
| ! | GATTATGAAAAAAGCGCGGT+TGG | - | chr2_1:12341165-12341184 | None:intergenic | 40.0% |
| GAATTGATTGGGATTGGGAT+TGG | - | chr2_1:12341212-12341231 | None:intergenic | 40.0% | |
| AGGGAGAATTGATTGGGATT+GGG | - | chr2_1:12341217-12341236 | None:intergenic | 40.0% | |
| CATTGGAGGGAGAATTGATT+GGG | - | chr2_1:12341223-12341242 | None:intergenic | 40.0% | |
| ! | TATCGTTTTCGTCTGGATCA+GGG | - | chr2_1:12341341-12341360 | None:intergenic | 40.0% |
| AAGTTGGAGCAAGTTAACCT+CGG | - | chr2_1:12341381-12341400 | None:intergenic | 40.0% | |
| !! | TCTAACAAAGCATCGAGTTC+GGG | - | chr2_1:12341432-12341451 | None:intergenic | 40.0% |
| AGCTTAAAGGCTATCATCGA+CGG | + | chr2_1:12341547-12341566 | Msa0195510:CDS | 40.0% | |
| GCTACTACTGTTGTTCTTGA+TGG | + | chr2_1:12341597-12341616 | Msa0195510:CDS | 40.0% | |
| AAGAGATACTGTCAACAGTG+TGG | + | chr2_1:12341627-12341646 | Msa0195510:CDS | 40.0% | |
| AGAGATACTGTCAACAGTGT+GGG | + | chr2_1:12341628-12341647 | Msa0195510:CDS | 40.0% | |
| ACGGAGTTGTAGAAGGAAAT+TGG | + | chr2_1:12341787-12341806 | Msa0195510:CDS | 40.0% | |
| GTTGTAGAAGGAAATTGGAG+CGG | + | chr2_1:12341792-12341811 | Msa0195510:CDS | 40.0% | |
| AATTGGAGCGGCATAATACT+AGG | + | chr2_1:12341804-12341823 | Msa0195510:CDS | 40.0% | |
| TAATACTAGGAGGAGGAGAA+AGG | + | chr2_1:12341817-12341836 | Msa0195510:CDS | 40.0% | |
| ! | TCCAATTGTGATGGAGAACT+AGG | + | chr2_1:12341899-12341918 | Msa0195510:CDS | 40.0% |
| ! | TCCTAGTTCTCCATCACAAT+TGG | - | chr2_1:12341903-12341922 | None:intergenic | 40.0% |
| ! | TGTGATGGAGAACTAGGAAT+AGG | + | chr2_1:12341905-12341924 | Msa0195510:CDS | 40.0% |
| ATGGAGAACTAGGAATAGGT+TGG | + | chr2_1:12341909-12341928 | Msa0195510:intron | 40.0% | |
| TTGTCAGTTGACAGAGTGAT+AGG | - | chr2_1:12342209-12342228 | None:intergenic | 40.0% | |
| TCTGTCAACTGACAAGTCAA+TGG | + | chr2_1:12342214-12342233 | Msa0195510:intron | 40.0% | |
| TACACATCCATAAAGCCACA+TGG | - | chr2_1:12342294-12342313 | None:intergenic | 40.0% | |
| !! | TGTGGCTTTATGGATGTGTA+TGG | + | chr2_1:12342294-12342313 | Msa0195510:intron | 40.0% |
| !! | GTGGCTTTATGGATGTGTAT+GGG | + | chr2_1:12342295-12342314 | Msa0195510:intron | 40.0% |
| GAAGAAGAACCGGTTGTTAA+TGG | + | chr2_1:12342379-12342398 | Msa0195510:CDS | 40.0% | |
| GTTGACGAACCATTAACAAC+CGG | - | chr2_1:12342391-12342410 | None:intergenic | 40.0% | |
| CCAGAGACCCAGAATATTAA+CGG | + | chr2_1:12342412-12342431 | Msa0195510:CDS | 40.0% | |
| GCTGTCACCGTTAATATTCT+GGG | - | chr2_1:12342422-12342441 | None:intergenic | 40.0% | |
| TGTTTCAGCAGAAGCAACAA+AGG | - | chr2_1:12342452-12342471 | None:intergenic | 40.0% | |
| GCTGAAACACAAGCGAATAT+TGG | + | chr2_1:12342463-12342482 | Msa0195510:CDS | 40.0% | |
| CAATATGAAGGCGACTTAGA+AGG | - | chr2_1:12342505-12342524 | None:intergenic | 40.0% | |
| !! | ATATATCCCTCTAGCTCTAC+AGG | - | chr2_1:12342860-12342879 | None:intergenic | 40.0% |
| CCTAACAGGCACTTAAGATA+TGG | - | chr2_1:12342986-12343005 | None:intergenic | 40.0% | |
| CCATATCTTAAGTGCCTGTT+AGG | + | chr2_1:12342983-12343002 | Msa0195510:intron | 40.0% | |
| GTGCCCTGTATTAGACTTTA+TGG | + | chr2_1:12343038-12343057 | Msa0195510:intron | 40.0% | |
| CCTGATTCATTACAGAGAGA+GGG | - | chr2_1:12343169-12343188 | None:intergenic | 40.0% | |
| TCCTGATTCATTACAGAGAG+AGG | - | chr2_1:12343170-12343189 | None:intergenic | 40.0% | |
| ACATAGGGTCTTTGAGTAAC+TGG | - | chr2_1:12343326-12343345 | None:intergenic | 40.0% | |
| CTTCCAGATAGCATCTTTCT+GGG | - | chr2_1:12343372-12343391 | None:intergenic | 40.0% | |
| TCTTCCAGATAGCATCTTTC+TGG | - | chr2_1:12343373-12343392 | None:intergenic | 40.0% | |
| AGAAAGATGCTATCTGGAAG+AGG | + | chr2_1:12343372-12343391 | Msa0195510:CDS | 40.0% | |
| ! | GTTATAGGCTTCAAGTTCTG+AGG | + | chr2_1:12343562-12343581 | Msa0195510:intron | 40.0% |
| GGATGAATATAGTGAAGCCT+AGG | - | chr2_1:12343676-12343695 | None:intergenic | 40.0% | |
| TTTCCTGCTTCAAAGCATGT+GGG | - | chr2_1:12343697-12343716 | None:intergenic | 40.0% | |
| ! | TTTTCCTGCTTCAAAGCATG+TGG | - | chr2_1:12343698-12343717 | None:intergenic | 40.0% |
| CCACAAGCGAAAAATTCCAT+GGG | - | chr2_1:12343721-12343740 | None:intergenic | 40.0% | |
| TCCACAAGCGAAAAATTCCA+TGG | - | chr2_1:12343722-12343741 | None:intergenic | 40.0% | |
| TTGTAAGGGAAAACACATGC+AGG | + | chr2_1:12343912-12343931 | Msa0195510:intron | 40.0% | |
| TAGAAACCAGAACCACACAA+AGG | + | chr2_1:12343950-12343969 | Msa0195510:intron | 40.0% | |
| TAATTGCCTTTGTGTGGTTC+TGG | - | chr2_1:12343959-12343978 | None:intergenic | 40.0% | |
| GGGATTGAGTAGTAAGAGAA+AGG | - | chr2_1:12344115-12344134 | None:intergenic | 40.0% | |
| AGAGGGCTTCTAATATATGG+GGG | - | chr2_1:12344135-12344154 | None:intergenic | 40.0% | |
| CGTAGAGGGCTTCTAATATA+TGG | - | chr2_1:12344138-12344157 | None:intergenic | 40.0% | |
| CGTACAAAATTGAGTAGCAG+TGG | - | chr2_1:12344180-12344199 | None:intergenic | 40.0% | |
| GTTCATTTCTCTCTCATGTG+AGG | + | chr2_1:12344375-12344394 | Msa0195510:intron | 40.0% | |
| CGTATCATTAAGTGTGCCTA+AGG | + | chr2_1:12344669-12344688 | Msa0195510:intron | 40.0% | |
| ACATCTCCAATTGTCCTATC+TGG | + | chr2_1:12344786-12344805 | Msa0195510:intron | 40.0% | |
| TTCTCTGCTTAACTCCAGAT+AGG | - | chr2_1:12344803-12344822 | None:intergenic | 40.0% | |
| GGAATGCAAACCTAAAAGGA+AGG | - | chr2_1:12344981-12345000 | None:intergenic | 40.0% | |
| CAAACTAGGCCACTGAAATT+GGG | - | chr2_1:12345214-12345233 | None:intergenic | 40.0% | |
| ! | TAGAATTGGTCTAGTGGTGA+GGG | + | chr2_1:12345344-12345363 | Msa0195510:intron | 40.0% |
| !! | TTTTTGGTGTACAACGGTGT+CGG | - | chr2_1:12345405-12345424 | None:intergenic | 40.0% |
| ATGTACGTCTGACTGTAATG+AGG | + | chr2_1:12345474-12345493 | Msa0195510:intron | 40.0% | |
| AATGAGGTGATAATCATGGC+AGG | + | chr2_1:12345490-12345509 | Msa0195510:intron | 40.0% | |
| GATATGTGTCCCTCATATTG+AGG | + | chr2_1:12345623-12345642 | Msa0195510:CDS | 40.0% | |
| TGGAGGTCAATGCATACTTA+AGG | - | chr2_1:12345700-12345719 | None:intergenic | 40.0% | |
| TCAGTGCAAAATTCGATACC+GGG | - | chr2_1:12346092-12346111 | None:intergenic | 40.0% | |
| CTCATTCTCAACCTACAGAA+AGG | - | chr2_1:12346475-12346494 | None:intergenic | 40.0% | |
| AAACAATTTCGGTCTGCATC+TGG | + | chr2_1:12346594-12346613 | Msa0195510:CDS | 40.0% | |
| ! | AGAGATGCTATTTGTCGGAA+AGG | + | chr2_1:12346909-12346928 | Msa0195510:CDS | 40.0% |
| !! | AGGTTTGAAGCCTTCCATTT+TGG | - | chr2_1:12346955-12346974 | None:intergenic | 40.0% |
| ! | CAACTGATAACTTGGCGTTT+TGG | - | chr2_1:12346992-12347011 | None:intergenic | 40.0% |
| ! | GATACTCTGCGTTTTACTTC+AGG | + | chr2_1:12347103-12347122 | Msa0195510:intron | 40.0% |
| AGCATGTGTTGGAATTTCCA+TGG | + | chr2_1:12347532-12347551 | Msa0195510:intron | 40.0% | |
| ! | ACTTTGCTCCATCTTTTCCA+TGG | - | chr2_1:12347552-12347571 | None:intergenic | 40.0% |
| CTGATTCCGTAAATCCTAGT+TGG | + | chr2_1:12347579-12347598 | Msa0195510:intron | 40.0% | |
| ! | TTTAGAGCAGATGCAGAGTT+GGG | + | chr2_1:12347654-12347673 | Msa0195510:CDS | 40.0% |
| TGACCGTCAAAATCTTACCA+GGG | + | chr2_1:12347773-12347792 | Msa0195510:CDS | 40.0% | |
| ! | ATCCCCTGGTAAGATTTTGA+CGG | - | chr2_1:12347779-12347798 | None:intergenic | 40.0% |
| AGTTGGCAGTATCCATTAGA+AGG | + | chr2_1:12347892-12347911 | Msa0195510:CDS | 40.0% | |
| AGGACGACCATGTTTATTTG+TGG | + | chr2_1:12348025-12348044 | Msa0195510:three_prime_UTR | 40.0% | |
| GGTATAATTAGCATGCTGCA+AGG | + | chr2_1:12348115-12348134 | Msa0195510:three_prime_UTR | 40.0% | |
| ! | GGTGGTGGTTAGAAAGTTGT+TGG | - | chr2_1:12341128-12341147 | None:intergenic | 45.0% |
| !! | GAATAAGCGCTTTTTGGTGG+TGG | - | chr2_1:12341143-12341162 | None:intergenic | 45.0% |
| ! | CGGTTGGAATAAGCGCTTTT+TGG | - | chr2_1:12341149-12341168 | None:intergenic | 45.0% |
| TTGGGATTGGGATTGAGGTT+TGG | - | chr2_1:12341199-12341218 | None:intergenic | 45.0% | |
| GAGGGAGAATTGATTGGGAT+TGG | - | chr2_1:12341218-12341237 | None:intergenic | 45.0% | |
| CCATTGGAGGGAGAATTGAT+TGG | - | chr2_1:12341224-12341243 | None:intergenic | 45.0% | |
| CCAATCAATTCTCCCTCCAA+TGG | + | chr2_1:12341221-12341240 | Msa0195510:CDS | 45.0% | |
| GAGGTAAGATAGGTCCCAAA+CGG | - | chr2_1:12341268-12341287 | None:intergenic | 45.0% | |
| GGTTAGAGTTTGGAAGAGGA+GGG | - | chr2_1:12341320-12341339 | None:intergenic | 45.0% | |
| TCAGGGTTAGAGTTTGGAAG+AGG | - | chr2_1:12341324-12341343 | None:intergenic | 45.0% | |
| TCTGGATCAGGGTTAGAGTT+TGG | - | chr2_1:12341330-12341349 | None:intergenic | 45.0% | |
| ! | CTATCGTTTTCGTCTGGATC+AGG | - | chr2_1:12341342-12341361 | None:intergenic | 45.0% |
| CTGATCCAGACGAAAACGAT+AGG | + | chr2_1:12341340-12341359 | Msa0195510:CDS | 45.0% | |
| AGTTGGAGCAAGTTAACCTC+GGG | - | chr2_1:12341380-12341399 | None:intergenic | 45.0% | |
| ! | AACTTGCTCCAACTTTCTCG+CGG | + | chr2_1:12341386-12341405 | Msa0195510:CDS | 45.0% |
| !! | CTAACAAAGCATCGAGTTCG+GGG | - | chr2_1:12341431-12341450 | None:intergenic | 45.0% |
| CGGATTTCGATGAAGGGAAA+CGG | + | chr2_1:12341768-12341787 | Msa0195510:CDS | 45.0% | |
| AAGGGAAACGGAGTTGTAGA+AGG | + | chr2_1:12341780-12341799 | Msa0195510:CDS | 45.0% | |
| AAGGCTGTAGATTCTGCAGT+AGG | + | chr2_1:12341836-12341855 | Msa0195510:CDS | 45.0% | |
| ! | ACCGGTTCTTCTTCATGATC+CGG | - | chr2_1:12342373-12342392 | None:intergenic | 45.0% |
| CCGTTAATATTCTGGGTCTC+TGG | - | chr2_1:12342415-12342434 | None:intergenic | 45.0% | |
| CGCTGTCACCGTTAATATTC+TGG | - | chr2_1:12342423-12342442 | None:intergenic | 45.0% | |
| TGAAGGCGACTTAGAAGGAT+CGG | - | chr2_1:12342500-12342519 | None:intergenic | 45.0% | |
| TTGGTGCGAGAAATTGTGGT+TGG | + | chr2_1:12342603-12342622 | Msa0195510:intron | 45.0% | |
| ! | TTTTGCTTGCAGTGCCAAAC+AGG | + | chr2_1:12342642-12342661 | Msa0195510:intron | 45.0% |
| TAAAAGAAACCCGGCCTGTT+TGG | - | chr2_1:12342659-12342678 | None:intergenic | 45.0% | |
| ATCCTGCGGAATTTCCAAGA+AGG | + | chr2_1:12342694-12342713 | Msa0195510:CDS | 45.0% | |
| AAGTATGCCTGTAGAGCTAG+AGG | + | chr2_1:12342850-12342869 | Msa0195510:CDS | 45.0% | |
| AGTATGCCTGTAGAGCTAGA+GGG | + | chr2_1:12342851-12342870 | Msa0195510:CDS | 45.0% | |
| TTCATTACAGAGAGAGGGAG+TGG | - | chr2_1:12343164-12343183 | None:intergenic | 45.0% | |
| CCCTCTCTCTGTAATGAATC+AGG | + | chr2_1:12343166-12343185 | Msa0195510:intron | 45.0% | |
| AAAAGTCGAGGCAAACATGC+AGG | + | chr2_1:12343648-12343667 | Msa0195510:CDS | 45.0% | |
| !! | CTTTGAAGCAGGAAAACCCA+TGG | + | chr2_1:12343702-12343721 | Msa0195510:CDS | 45.0% |
| ! | CCCATGGAATTTTTCGCTTG+TGG | + | chr2_1:12343718-12343737 | Msa0195510:CDS | 45.0% |
| !! | CTTGTGGAAGTAACTTGCTG+CGG | + | chr2_1:12343734-12343753 | Msa0195510:CDS | 45.0% |
| TTACATTAGGTCCCCAACAC+TGG | - | chr2_1:12343875-12343894 | None:intergenic | 45.0% | |
| ! | AGTGTTGGGGACCTAATGTA+AGG | + | chr2_1:12343874-12343893 | Msa0195510:intron | 45.0% |
| GTGTTGGGGACCTAATGTAA+GGG | + | chr2_1:12343875-12343894 | Msa0195510:intron | 45.0% | |
| GAAAACACATGCAGGTCACA+AGG | + | chr2_1:12343920-12343939 | Msa0195510:intron | 45.0% | |
| AAGGCATAAACCACTTGGGT+TGG | + | chr2_1:12345121-12345140 | Msa0195510:intron | 45.0% | |
| AATCTAACCCGAGACCTTGA+AGG | - | chr2_1:12345182-12345201 | None:intergenic | 45.0% | |
| ! | GTCTCGGGTTAGATTCTCTT+CGG | + | chr2_1:12345187-12345206 | Msa0195510:intron | 45.0% |
| CCAAACTAGGCCACTGAAAT+TGG | - | chr2_1:12345215-12345234 | None:intergenic | 45.0% | |
| CCAATTTCAGTGGCCTAGTT+TGG | + | chr2_1:12345212-12345231 | Msa0195510:intron | 45.0% | |
| ! | AGCCACTAGAATTGGTCTAG+TGG | + | chr2_1:12345338-12345357 | Msa0195510:intron | 45.0% |
| CACCACTAGACCAATTCTAG+TGG | - | chr2_1:12345343-12345362 | None:intergenic | 45.0% | |
| ! | CTAGAATTGGTCTAGTGGTG+AGG | + | chr2_1:12345343-12345362 | Msa0195510:intron | 45.0% |
| ! | AGAATTGGTCTAGTGGTGAG+GGG | + | chr2_1:12345345-12345364 | Msa0195510:intron | 45.0% |
| TTGTCTTCAGCCGAGTTATG+TGG | - | chr2_1:12345570-12345589 | None:intergenic | 45.0% | |
| ATCCTCGTAGAAAGTCTTCC+CGG | + | chr2_1:12346071-12346090 | Msa0195510:intron | 45.0% | |
| ! | CTGTAGGTTGAGAATGAGTC+TGG | + | chr2_1:12346477-12346496 | Msa0195510:intron | 45.0% |
| ! | GATGCTATTTGTCGGAAAGG+TGG | + | chr2_1:12346912-12346931 | Msa0195510:CDS | 45.0% |
| !! | CAGTTTGGAGTACTGGAGTT+GGG | - | chr2_1:12347207-12347226 | None:intergenic | 45.0% |
| CATTCACATTGCCACCAGTT+TGG | - | chr2_1:12347222-12347241 | None:intergenic | 45.0% | |
| CCAACACATGCTACTGTTGA+TGG | - | chr2_1:12347524-12347543 | None:intergenic | 45.0% | |
| CCATCAACAGTAGCATGTGT+TGG | + | chr2_1:12347521-12347540 | Msa0195510:intron | 45.0% | |
| ! | ACTCTGCATCTGCTCTAAAC+TGG | - | chr2_1:12347653-12347672 | None:intergenic | 45.0% |
| ! | GTTTAGAGCAGATGCAGAGT+TGG | + | chr2_1:12347653-12347672 | Msa0195510:CDS | 45.0% |
| GTGACCGTCAAAATCTTACC+AGG | + | chr2_1:12347772-12347791 | Msa0195510:CDS | 45.0% | |
| GACCGTCAAAATCTTACCAG+GGG | + | chr2_1:12347774-12347793 | Msa0195510:CDS | 45.0% | |
| ! | TTGGCGGAGAAGGTACGATA+CGG | - | chr2_1:12341101-12341120 | None:intergenic | 50.0% |
| TGTTGGATGTTTGGCGGAGA+AGG | - | chr2_1:12341111-12341130 | None:intergenic | 50.0% | |
| TGGGATTGGGATTGGGATTG+AGG | - | chr2_1:12341204-12341223 | None:intergenic | 50.0% | |
| CAAACGGAGGAGAGATCTTC+GGG | - | chr2_1:12341252-12341271 | None:intergenic | 50.0% | |
| CCAAACGGAGGAGAGATCTT+CGG | - | chr2_1:12341253-12341272 | None:intergenic | 50.0% | |
| CGAAGATCTCTCCTCCGTTT+GGG | + | chr2_1:12341251-12341270 | Msa0195510:CDS | 50.0% | |
| GTAAGATAGGTCCCAAACGG+AGG | - | chr2_1:12341265-12341284 | None:intergenic | 50.0% | |
| CGAAGTCGAGGAGGTAAGAT+AGG | - | chr2_1:12341278-12341297 | None:intergenic | 50.0% | |
| GAATATCGTCGTCGAAGTCG+AGG | - | chr2_1:12341290-12341309 | None:intergenic | 50.0% | |
| GGGTTAGAGTTTGGAAGAGG+AGG | - | chr2_1:12341321-12341340 | None:intergenic | 50.0% | |
| ! | CGGATCCTATCGTTTTCGTC+TGG | - | chr2_1:12341348-12341367 | None:intergenic | 50.0% |
| TTAACCTCGGGTCACGCTTT+CGG | - | chr2_1:12341368-12341387 | None:intergenic | 50.0% | |
| ACTTGCTCCAACTTTCTCGC+GGG | + | chr2_1:12341387-12341406 | Msa0195510:CDS | 50.0% | |
| TACTTGACCCGCGAGAAAGT+TGG | - | chr2_1:12341397-12341416 | None:intergenic | 50.0% | |
| TACCAGGGAAGAAACGAGCT+CGG | + | chr2_1:12341463-12341482 | Msa0195510:CDS | 50.0% | |
| AAGGCTATCATCGACGGCAT+AGG | + | chr2_1:12341553-12341572 | Msa0195510:CDS | 50.0% | |
| AGGCTATCATCGACGGCATA+GGG | + | chr2_1:12341554-12341573 | Msa0195510:CDS | 50.0% | |
| ! | GACGGCATAGGGTTTGTTTG+CGG | + | chr2_1:12341565-12341584 | Msa0195510:CDS | 50.0% |
| TGGAGCGGCATAATACTAGG+AGG | + | chr2_1:12341807-12341826 | Msa0195510:CDS | 50.0% | |
| AGCGGCATAATACTAGGAGG+AGG | + | chr2_1:12341810-12341829 | Msa0195510:CDS | 50.0% | |
| AAGTTATCCTATCGCGCCGA+CGG | - | chr2_1:12342066-12342085 | None:intergenic | 50.0% | |
| GCCGGATCATGAAGAAGAAC+CGG | + | chr2_1:12342369-12342388 | Msa0195510:CDS | 50.0% | |
| GCTTTACGACTGGAATCCTG+CGG | + | chr2_1:12342680-12342699 | Msa0195510:CDS | 50.0% | |
| AGCCTTCTTGGAAATTCCGC+AGG | - | chr2_1:12342699-12342718 | None:intergenic | 50.0% | |
| CGGAATTTCCAAGAAGGCTG+CGG | + | chr2_1:12342700-12342719 | Msa0195510:CDS | 50.0% | |
| CAGGCATACTTGCCAACCAT+TGG | - | chr2_1:12342841-12342860 | None:intergenic | 50.0% | |
| TAGAGGGATATATCCGCCCT+GGG | + | chr2_1:12342867-12342886 | Msa0195510:CDS | 50.0% | |
| AGGGAGTGGAGAAATGTTGC+AGG | - | chr2_1:12343150-12343169 | None:intergenic | 50.0% | |
| GCTCCCAGAAAGATGCTATC+TGG | + | chr2_1:12343366-12343385 | Msa0195510:CDS | 50.0% | |
| !! | CATCCCACATGCTTTGAAGC+AGG | + | chr2_1:12343691-12343710 | Msa0195510:CDS | 50.0% |
| CAGCTCAGCTATGGGCAATA+AGG | - | chr2_1:12344055-12344074 | None:intergenic | 50.0% | |
| CAGAGTAGCAGCTCAGCTAT+GGG | - | chr2_1:12344063-12344082 | None:intergenic | 50.0% | |
| ACAGAGTAGCAGCTCAGCTA+TGG | - | chr2_1:12344064-12344083 | None:intergenic | 50.0% | |
| AGTAGCAGTGGAGTGAGAGA+GGG | - | chr2_1:12344168-12344187 | None:intergenic | 50.0% | |
| TCTCTCTCATGTGAGGATCG+AGG | + | chr2_1:12344382-12344401 | Msa0195510:intron | 50.0% | |
| CATGTGAGGATCGAGGAAAG+AGG | + | chr2_1:12344389-12344408 | Msa0195510:intron | 50.0% | |
| !! | ATAAACCACTTGGGTTGGCC+TGG | + | chr2_1:12345126-12345145 | Msa0195510:intron | 50.0% |
| !! | CTTTGGAGTGTGCTCCTTCA+AGG | + | chr2_1:12345165-12345184 | Msa0195510:intron | 50.0% |
| AGTGTGCTCCTTCAAGGTCT+CGG | + | chr2_1:12345171-12345190 | Msa0195510:intron | 50.0% | |
| CTCTTCGGTCCCAATTTCAG+TGG | + | chr2_1:12345202-12345221 | Msa0195510:intron | 50.0% | |
| GTAAGTATGCACGAGGTCCT+AGG | + | chr2_1:12345373-12345392 | Msa0195510:intron | 50.0% | |
| CGTTCCGTCTCCACATAACT+CGG | + | chr2_1:12345557-12345576 | Msa0195510:CDS | 50.0% | |
| TCAGCCGAGTTATGTGGAGA+CGG | - | chr2_1:12345564-12345583 | None:intergenic | 50.0% | |
| TACCGGGAAGACTTTCTACG+AGG | - | chr2_1:12346076-12346095 | None:intergenic | 50.0% | |
| TGACATGGACCAACTGCTGA+AGG | + | chr2_1:12346872-12346891 | Msa0195510:CDS | 50.0% | |
| GACATGGACCAACTGCTGAA+GGG | + | chr2_1:12346873-12346892 | Msa0195510:CDS | 50.0% | |
| TACACATGCCCTTCAGCAGT+TGG | - | chr2_1:12346884-12346903 | None:intergenic | 50.0% | |
| GCTATTTGTCGGAAAGGTGG+AGG | + | chr2_1:12346915-12346934 | Msa0195510:CDS | 50.0% | |
| !! | TTTTGGGAACTGCACTGAGC+AGG | - | chr2_1:12346975-12346994 | None:intergenic | 50.0% |
| ACATAAATGCACGGCCCACT+AGG | - | chr2_1:12347163-12347182 | None:intergenic | 50.0% | |
| !! | CCAGTTTGGAGTACTGGAGT+TGG | - | chr2_1:12347208-12347227 | None:intergenic | 50.0% |
| CCAACTCCAGTACTCCAAAC+TGG | + | chr2_1:12347205-12347224 | Msa0195510:intron | 50.0% | |
| ACTCCAGTACTCCAAACTGG+TGG | + | chr2_1:12347208-12347227 | Msa0195510:intron | 50.0% | |
| ! | TTGCCACCAGTTTGGAGTAC+TGG | - | chr2_1:12347214-12347233 | None:intergenic | 50.0% |
| TCGAGATCTCAAGAATCCCC+TGG | - | chr2_1:12347793-12347812 | None:intergenic | 50.0% | |
| TCATGGGAGGGTTAACGAGT+TGG | + | chr2_1:12347875-12347894 | Msa0195510:CDS | 50.0% | |
| !! | GGTACGATACGGTGGTGGAT+GGG | - | chr2_1:12341090-12341109 | None:intergenic | 55.0% |
| !! | AGGTACGATACGGTGGTGGA+TGG | - | chr2_1:12341091-12341110 | None:intergenic | 55.0% |
| ! | GAGAAGGTACGATACGGTGG+TGG | - | chr2_1:12341095-12341114 | None:intergenic | 55.0% |
| AGATCTTCGGGAGGGTCCAT+TGG | - | chr2_1:12341240-12341259 | None:intergenic | 55.0% | |
| CCGAAGATCTCTCCTCCGTT+TGG | + | chr2_1:12341250-12341269 | Msa0195510:CDS | 55.0% | |
| TATCGTCGTCGAAGTCGAGG+AGG | - | chr2_1:12341287-12341306 | None:intergenic | 55.0% | |
| TTTGGAAGAGGAGGGAGCTG+TGG | - | chr2_1:12341312-12341331 | None:intergenic | 55.0% | |
| CTTATTTCCGTCGGCGCGAT+AGG | + | chr2_1:12342056-12342075 | Msa0195510:intron | 55.0% | |
| CTAGAGGGATATATCCGCCC+TGG | + | chr2_1:12342866-12342885 | Msa0195510:CDS | 55.0% | |
| TCGTCAGGATCGTACACCCA+GGG | - | chr2_1:12342886-12342905 | None:intergenic | 55.0% | |
| ATCGTCAGGATCGTACACCC+AGG | - | chr2_1:12342887-12342906 | None:intergenic | 55.0% | |
| AGGCAAACATGCAGGCACCT+AGG | + | chr2_1:12343656-12343675 | Msa0195510:CDS | 55.0% | |
| ! | ACTTGCTGCGGCCCAAGTTT+CGG | + | chr2_1:12343746-12343765 | Msa0195510:CDS | 55.0% |
| GAGAGGGGAAATCGCGTAGA+GGG | - | chr2_1:12344152-12344171 | None:intergenic | 55.0% | |
| AGAGAGGGGAAATCGCGTAG+AGG | - | chr2_1:12344153-12344172 | None:intergenic | 55.0% | |
| GTAGCAGTGGAGTGAGAGAG+GGG | - | chr2_1:12344167-12344186 | None:intergenic | 55.0% | |
| GAGTAGCAGTGGAGTGAGAG+AGG | - | chr2_1:12344169-12344188 | None:intergenic | 55.0% | |
| !! | GTGGTGTTGGCTTGGGACTT+TGG | + | chr2_1:12345148-12345167 | Msa0195510:intron | 55.0% |
| GTGTGCTCCTTCAAGGTCTC+GGG | + | chr2_1:12345172-12345191 | Msa0195510:intron | 55.0% | |
| TGGTCTAGTGGTGAGGGGTT+CGG | + | chr2_1:12345350-12345369 | Msa0195510:intron | 55.0% | |
| GGTTCGGGTAAGTATGCACG+AGG | + | chr2_1:12345366-12345385 | Msa0195510:intron | 55.0% | |
| !! | TGGTGTACAACGGTGTCGGT+CGG | - | chr2_1:12345401-12345420 | None:intergenic | 55.0% |
| CCTCAATAAATGCAGGCCCC+AGG | - | chr2_1:12345656-12345675 | None:intergenic | 55.0% | |
| CCTGGGGCCTGCATTTATTG+AGG | + | chr2_1:12345653-12345672 | Msa0195510:CDS | 55.0% | |
| ! | GCGGAGAAGGTACGATACGG+TGG | - | chr2_1:12341098-12341117 | None:intergenic | 60.0% |
| CTTCGGGAGGGTCCATTGGA+GGG | - | chr2_1:12341236-12341255 | None:intergenic | 60.0% | |
| TCTTCGGGAGGGTCCATTGG+AGG | - | chr2_1:12341237-12341256 | None:intergenic | 60.0% | |
| CGGAGGAGAGATCTTCGGGA+GGG | - | chr2_1:12341248-12341267 | None:intergenic | 60.0% | |
| ACGGAGGAGAGATCTTCGGG+AGG | - | chr2_1:12341249-12341268 | None:intergenic | 60.0% | |
| TCGAGTTCGGGGCATGCACA+TGG | - | chr2_1:12341420-12341439 | None:intergenic | 60.0% | |
| GTCCGAGCTCGTTTCTTCCC+TGG | - | chr2_1:12341468-12341487 | None:intergenic | 60.0% | |
| GCTTGCAGTGCCAAACAGGC+CGG | + | chr2_1:12342646-12342665 | Msa0195510:intron | 60.0% | |
| CTTGCAGTGCCAAACAGGCC+GGG | + | chr2_1:12342647-12342666 | Msa0195510:intron | 60.0% | |
| ACTTGGAGCCGCAGCCTTCT+TGG | - | chr2_1:12342711-12342730 | None:intergenic | 60.0% | |
| TCAGGATCGTACACCCAGGG+CGG | - | chr2_1:12342883-12342902 | None:intergenic | 60.0% | |
| !! | AACCACTTGGGTTGGCCTGG+TGG | + | chr2_1:12345129-12345148 | Msa0195510:intron | 60.0% |
| !! | TTGGGTTGGCCTGGTGGTGT+TGG | + | chr2_1:12345135-12345154 | Msa0195510:intron | 60.0% |
| !! | TTGGCCTGGTGGTGTTGGCT+TGG | + | chr2_1:12345140-12345159 | Msa0195510:intron | 60.0% |
| !! | TGGCCTGGTGGTGTTGGCTT+GGG | + | chr2_1:12345141-12345160 | Msa0195510:intron | 60.0% |
| AGTCCCAAGCCAACACCACC+AGG | - | chr2_1:12345147-12345166 | None:intergenic | 60.0% | |
| GGTCTAGTGGTGAGGGGTTC+GGG | + | chr2_1:12345351-12345370 | Msa0195510:intron | 60.0% | |
| !! | AACGGTGTCGGTCGGAACCT+AGG | - | chr2_1:12345393-12345412 | None:intergenic | 60.0% |
| ! | GGATCCGAAAGCGTGACCCG+AGG | + | chr2_1:12341361-12341380 | Msa0195510:CDS | 65.0% |
| TCGGCGCGTTGTCAGGTTCC+TGG | + | chr2_1:12341504-12341523 | Msa0195510:CDS | 65.0% | |
| CACCACCAGGCCAACCCAAG+TGG | - | chr2_1:12345134-12345153 | None:intergenic | 65.0% | |
| ! | GGCTGCATCGGCGCGTTGTC+AGG | + | chr2_1:12341497-12341516 | Msa0195510:CDS | 70.0% |
| ACGAGCTCGGACTGCCCGCG+CGG | + | chr2_1:12341476-12341495 | Msa0195510:CDS | 75.0% | |
| GACTGCCCGCGCGGCTGCAT+CGG | + | chr2_1:12341485-12341504 | Msa0195510:CDS | 75.0% | |
| ! | AACGCGCCGATGCAGCCGCG+CGG | - | chr2_1:12341494-12341513 | None:intergenic | 75.0% |
| !! | ACGCGCCGATGCAGCCGCGC+GGG | - | chr2_1:12341493-12341512 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 12341022 | 12348219 | 12341022 | ID=Msa0195510;Name=Msa0195510 |
| chr2_1 | mRNA | 12341022 | 12348219 | 12341022 | ID=Msa0195510-mRNA-1;Parent=Msa0195510;Name=Msa0195510-mRNA-1;_AED=0.05;_eAED=0.05;_QI=167|1|1|1|1|1|10|287|764 |
| chr2_1 | exon | 12341022 | 12341652 | 12341022 | ID=Msa0195510-mRNA-1:exon:5346;Parent=Msa0195510-mRNA-1 |
| chr2_1 | exon | 12341754 | 12341926 | 12341754 | ID=Msa0195510-mRNA-1:exon:5347;Parent=Msa0195510-mRNA-1 |
| chr2_1 | exon | 12342326 | 12342552 | 12342326 | ID=Msa0195510-mRNA-1:exon:5348;Parent=Msa0195510-mRNA-1 |
| chr2_1 | exon | 12342654 | 12342728 | 12342654 | ID=Msa0195510-mRNA-1:exon:5349;Parent=Msa0195510-mRNA-1 |
| chr2_1 | exon | 12342833 | 12342940 | 12342833 | ID=Msa0195510-mRNA-1:exon:5350;Parent=Msa0195510-mRNA-1 |
| chr2_1 | exon | 12343327 | 12343441 | 12343327 | ID=Msa0195510-mRNA-1:exon:5351;Parent=Msa0195510-mRNA-1 |
| chr2_1 | exon | 12343632 | 12343767 | 12343632 | ID=Msa0195510-mRNA-1:exon:5352;Parent=Msa0195510-mRNA-1 |
| chr2_1 | exon | 12345512 | 12345674 | 12345512 | ID=Msa0195510-mRNA-1:exon:5353;Parent=Msa0195510-mRNA-1 |
| chr2_1 | exon | 12346483 | 12347028 | 12346483 | ID=Msa0195510-mRNA-1:exon:5354;Parent=Msa0195510-mRNA-1 |
| chr2_1 | exon | 12347645 | 12348219 | 12347645 | ID=Msa0195510-mRNA-1:exon:5355;Parent=Msa0195510-mRNA-1 |
| chr2_1 | five_prime_UTR | 12341022 | 12341188 | 12341022 | ID=Msa0195510-mRNA-1:five_prime_utr;Parent=Msa0195510-mRNA-1 |
| chr2_1 | CDS | 12341189 | 12341652 | 12341189 | ID=Msa0195510-mRNA-1:cds;Parent=Msa0195510-mRNA-1 |
| chr2_1 | CDS | 12341754 | 12341926 | 12341754 | ID=Msa0195510-mRNA-1:cds;Parent=Msa0195510-mRNA-1 |
| chr2_1 | CDS | 12342326 | 12342552 | 12342326 | ID=Msa0195510-mRNA-1:cds;Parent=Msa0195510-mRNA-1 |
| chr2_1 | CDS | 12342654 | 12342728 | 12342654 | ID=Msa0195510-mRNA-1:cds;Parent=Msa0195510-mRNA-1 |
| chr2_1 | CDS | 12342833 | 12342940 | 12342833 | ID=Msa0195510-mRNA-1:cds;Parent=Msa0195510-mRNA-1 |
| chr2_1 | CDS | 12343327 | 12343441 | 12343327 | ID=Msa0195510-mRNA-1:cds;Parent=Msa0195510-mRNA-1 |
| chr2_1 | CDS | 12343632 | 12343767 | 12343632 | ID=Msa0195510-mRNA-1:cds;Parent=Msa0195510-mRNA-1 |
| chr2_1 | CDS | 12345512 | 12345674 | 12345512 | ID=Msa0195510-mRNA-1:cds;Parent=Msa0195510-mRNA-1 |
| chr2_1 | CDS | 12346483 | 12347028 | 12346483 | ID=Msa0195510-mRNA-1:cds;Parent=Msa0195510-mRNA-1 |
| chr2_1 | CDS | 12347645 | 12347932 | 12347645 | ID=Msa0195510-mRNA-1:cds;Parent=Msa0195510-mRNA-1 |
| chr2_1 | three_prime_UTR | 12347933 | 12348219 | 12347933 | ID=Msa0195510-mRNA-1:three_prime_utr;Parent=Msa0195510-mRNA-1 |
| Gene Sequence |
| Protein sequence |