AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0156330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0156330 MtrunA17_Chr1g0167691 85.765 281 13 4 1 280 1 255 2.72e-162 451
Msa0156330 MtrunA17_Chr1g0167661 77.580 281 35 5 1 280 1 254 2.87e-152 425
Msa0156330 MtrunA17_Chr1g0187761 62.544 283 78 6 1 280 1 258 1.19e-109 317
Msa0156330 MtrunA17_Chr7g0261281 46.392 291 132 7 1 280 1 278 2.81e-76 233
Msa0156330 MtrunA17_Chr7g0274581 60.526 152 52 2 1 152 1 144 8.00e-64 199
Msa0156330 MtrunA17_Chr1g0203411 53.763 186 64 3 1 170 1 180 1.78e-62 199
Msa0156330 MtrunA17_Chr4g0039971 70.732 123 30 1 1 123 2 118 5.21e-60 194
Msa0156330 MtrunA17_Chr2g0281071 70.968 124 29 2 1 123 1 118 1.70e-59 192
Msa0156330 MtrunA17_Chr4g0048511 70.161 124 30 2 1 123 1 118 1.19e-58 191
Msa0156330 MtrunA17_Chr2g0323411 69.919 123 31 1 1 123 1 117 2.14e-58 189
Msa0156330 MtrunA17_Chr3g0115821 66.935 124 35 1 1 124 1 118 8.91e-58 188
Msa0156330 MtrunA17_Chr7g0217741 69.672 122 31 1 1 122 1 116 2.25e-57 186
Msa0156330 MtrunA17_Chr2g0323351 62.000 150 42 3 1 150 1 135 2.27e-57 184
Msa0156330 MtrunA17_Chr4g0042671 57.233 159 58 2 1 155 1 153 3.73e-57 188
Msa0156330 MtrunA17_Chr4g0022891 44.915 236 103 6 1 225 1 220 9.36e-57 182
Msa0156330 MtrunA17_Chr6g0453471 68.852 122 32 1 1 122 1 116 6.26e-56 184
Msa0156330 MtrunA17_Chr4g0068061 66.393 122 35 1 1 122 1 116 6.30e-56 183
Msa0156330 MtrunA17_Chr8g0349261 66.400 125 34 3 1 123 1 119 6.54e-56 182
Msa0156330 MtrunA17_Chr7g0275911 64.516 124 38 1 1 124 1 118 1.49e-55 179
Msa0156330 MtrunA17_Chr8g0346561 63.934 122 38 1 1 122 1 116 2.27e-55 181
Msa0156330 MtrunA17_Chr4g0022931 65.854 123 35 2 1 122 1 117 3.20e-55 179
Msa0156330 MtrunA17_Chr4g0022901 58.904 146 51 3 1 143 1 140 4.67e-55 179
Msa0156330 MtrunA17_Chr4g0037141 65.323 124 37 1 1 124 1 118 4.99e-55 179
Msa0156330 MtrunA17_Chr3g0121241 50.000 166 77 1 5 170 35 194 1.96e-54 178
Msa0156330 MtrunA17_Chr5g0395281 65.041 123 37 1 1 123 1 117 3.01e-54 178
Msa0156330 MtrunA17_Chr4g0070641 47.541 183 79 3 1 183 1 166 1.09e-53 172
Msa0156330 MtrunA17_Chr4g0022911 53.374 163 67 3 1 162 1 155 1.14e-53 176
Msa0156330 MtrunA17_Chr5g0410961 65.041 123 37 1 1 123 1 117 1.36e-53 177
Msa0156330 MtrunA17_Chr4g0070611 47.208 197 84 5 1 194 1 180 1.48e-53 176
Msa0156330 MtrunA17_Chr2g0311221 66.957 115 32 1 3 117 5 113 2.74e-53 176
Msa0156330 MtrunA17_Chr3g0131121 53.086 162 58 2 1 162 1 144 1.51e-52 173
Msa0156330 MtrunA17_Chr3g0092401 61.905 126 42 1 1 126 2 121 5.64e-52 172
Msa0156330 MtrunA17_Chr1g0194951 63.115 122 39 1 1 122 1 116 5.85e-52 174
Msa0156330 MtrunA17_Chr1g0193371 51.892 185 72 5 1 174 1 179 7.60e-52 173
Msa0156330 MtrunA17_Chr7g0217221 62.295 122 40 1 1 122 1 116 3.53e-51 169
Msa0156330 MtrunA17_Chr4g0060721 60.656 122 42 1 1 122 2 117 1.45e-50 169
Msa0156330 MtrunA17_Chr8g0385321 62.295 122 40 1 1 122 1 116 1.95e-50 168
Msa0156330 MtrunA17_Chr3g0110351 63.115 122 39 1 1 122 1 116 2.04e-50 168
Msa0156330 MtrunA17_Chr7g0228891 58.209 134 46 2 1 130 1 128 3.19e-50 166
Msa0156330 MtrunA17_Chr6g0453211 63.248 117 37 1 1 117 1 111 3.27e-50 167
Msa0156330 MtrunA17_Chr7g0269831 68.033 122 33 1 1 122 1 116 3.78e-50 169
Msa0156330 MtrunA17_Chr3g0103281 62.295 122 40 1 1 122 1 116 4.31e-50 167
Msa0156330 MtrunA17_Chr5g0434571 52.532 158 68 2 1 158 37 187 6.74e-50 168
Msa0156330 MtrunA17_Chr4g0057031 60.163 123 43 1 1 123 1 117 1.23e-49 165
Msa0156330 MtrunA17_Chr1g0193801 46.939 196 73 4 1 171 1 190 1.36e-49 168
Msa0156330 MtrunA17_Chr4g0022881 59.167 120 43 1 1 120 1 114 3.41e-49 162
Msa0156330 MtrunA17_Chr7g0270891 47.500 200 74 5 1 175 1 194 3.68e-49 166
Msa0156330 MtrunA17_Chr5g0400821 43.379 219 96 7 1 212 1 198 5.84e-49 164
Msa0156330 MtrunA17_Chr1g0152011 50.314 159 72 2 1 158 1 153 7.57e-49 165
Msa0156330 MtrunA17_Chr1g0151941 57.143 126 47 2 1 125 1 120 8.66e-49 162
Msa0156330 MtrunA17_Chr7g0254411 62.295 122 40 1 1 122 1 116 1.94e-48 164
Msa0156330 MtrunA17_Chr7g0271241 45.498 211 94 7 1 205 1 196 2.22e-48 165
Msa0156330 MtrunA17_Chr5g0435101 54.918 122 49 1 2 123 1 116 2.41e-47 157
Msa0156330 MtrunA17_Chr4g0058631 60.163 123 43 1 1 123 1 117 9.53e-47 160
Msa0156330 MtrunA17_Chr2g0309911 45.128 195 89 5 6 198 5 183 2.05e-46 158
Msa0156330 MtrunA17_Chr4g0028311 58.065 124 45 2 1 123 1 118 7.82e-46 156
Msa0156330 MtrunA17_Chr3g0117091 59.350 123 44 1 1 123 1 117 1.73e-45 156
Msa0156330 MtrunA17_Chr7g0264641 54.688 128 51 2 1 127 1 122 4.24e-45 153
Msa0156330 MtrunA17_Chr3g0135311 50.360 139 62 2 1 138 1 133 6.42e-45 155
Msa0156330 MtrunA17_Chr4g0044421 57.724 123 45 2 2 123 1 117 7.70e-45 150
Msa0156330 MtrunA17_Chr1g0211161 57.851 121 45 1 3 123 4 118 8.88e-45 151
Msa0156330 MtrunA17_Chr5g0417821 62.832 113 36 1 11 123 6 112 9.09e-45 153
Msa0156330 MtrunA17_Chr6g0452271 54.472 123 50 1 1 123 1 117 2.72e-44 153
Msa0156330 MtrunA17_Chr4g0032401 47.568 185 78 5 12 187 17 191 2.91e-44 152
Msa0156330 MtrunA17_Chr2g0330041 56.098 123 48 1 1 123 1 117 3.24e-44 154
Msa0156330 MtrunA17_Chr2g0327351 58.974 117 41 2 1 116 1 111 8.53e-44 151
Msa0156330 MtrunA17_Chr8g0342541 54.472 123 50 1 1 123 1 117 8.55e-44 152
Msa0156330 MtrunA17_Chr4g0054391 51.974 152 65 3 1 150 1 146 9.88e-44 150
Msa0156330 MtrunA17_Chr8g0342521 54.472 123 50 1 1 123 1 117 3.28e-43 150
Msa0156330 MtrunA17_Chr1g0203441 60.177 113 39 1 13 125 14 120 5.57e-42 145
Msa0156330 MtrunA17_Chr6g0487491 46.626 163 68 4 1 154 1 153 7.21e-42 144
Msa0156330 MtrunA17_Chr8g0387421 53.279 122 51 1 1 122 1 116 7.86e-42 146
Msa0156330 MtrunA17_Chr4g0072751 58.120 117 42 2 1 116 1 111 8.54e-42 147
Msa0156330 MtrunA17_Chr2g0328771 60.177 113 39 1 12 124 20 126 1.33e-41 145
Msa0156330 MtrunA17_Chr7g0228231 55.932 118 46 1 12 129 14 125 1.34e-41 142
Msa0156330 MtrunA17_Chr7g0220341 44.643 168 82 3 11 176 24 182 1.67e-41 144
Msa0156330 MtrunA17_Chr1g0209661 55.462 119 47 1 8 126 23 135 2.45e-41 144
Msa0156330 MtrunA17_Chr6g0470971 55.932 118 46 1 4 121 6 117 4.18e-41 143
Msa0156330 MtrunA17_Chr8g0343831 55.738 122 44 2 1 122 1 112 6.37e-41 142
Msa0156330 MtrunA17_Chr7g0240821 43.103 174 87 4 16 189 5 166 1.00e-40 140
Msa0156330 MtrunA17_Chr4g0055981 56.637 113 43 1 9 121 52 158 1.30e-40 140
Msa0156330 MtrunA17_Chr8g0342481 51.562 128 55 2 1 127 1 122 1.64e-40 144
Msa0156330 MtrunA17_Chr5g0434911 50.847 118 52 1 7 124 16 127 2.21e-40 141
Msa0156330 MtrunA17_Chr3g0099131 46.405 153 70 2 12 158 41 187 3.14e-40 146
Msa0156330 MtrunA17_Chr5g0397231 51.493 134 59 1 1 134 1 128 4.31e-40 142
Msa0156330 MtrunA17_Chr3g0088461 60.526 114 39 1 9 122 19 126 4.45e-40 142
Msa0156330 MtrunA17_Chr3g0080861 57.273 110 41 1 12 121 37 140 5.64e-40 145
Msa0156330 MtrunA17_Chr8g0354661 57.273 110 41 1 12 121 37 140 7.38e-40 145
Msa0156330 MtrunA17_Chr6g0450101 48.227 141 63 3 1 139 1 133 9.24e-40 137
Msa0156330 MtrunA17_Chr5g0434931 51.304 115 50 1 10 124 33 141 1.28e-39 139
Msa0156330 MtrunA17_Chr4g0042611 63.830 94 28 1 1 94 1 88 5.47e-39 131
Msa0156330 MtrunA17_Chr2g0294811 64.286 98 29 1 1 98 1 92 5.85e-39 132
Msa0156330 MtrunA17_Chr1g0186061 49.612 129 57 2 13 141 21 141 7.58e-39 136
Msa0156330 MtrunA17_Chr5g0434831 53.509 114 47 1 10 123 5 112 1.14e-38 134
Msa0156330 MtrunA17_Chr2g0322521 57.522 113 42 1 9 121 26 132 1.25e-38 139
Msa0156330 MtrunA17_Chr1g0154031 55.455 110 43 1 12 121 76 179 1.32e-38 140
Msa0156330 MtrunA17_Chr1g0168661 51.261 119 52 1 6 124 15 127 1.64e-38 135
Msa0156330 MtrunA17_Chr1g0194291 55.856 111 43 1 11 121 20 124 4.07e-38 135
Msa0156330 MtrunA17_Chr5g0434841 50.862 116 51 1 8 123 16 125 1.10e-37 135
Msa0156330 MtrunA17_Chr1g0180391 54.054 111 45 1 12 122 19 123 4.77e-37 131
Msa0156330 MtrunA17_Chr2g0323321 60.204 98 32 2 1 98 1 91 5.16e-37 127
Msa0156330 MtrunA17_Chr7g0228991 50.877 114 50 1 10 123 27 134 7.13e-37 132
Msa0156330 MtrunA17_Chr7g0247131 74.324 74 19 0 49 122 9 82 1.78e-36 130
Msa0156330 MtrunA17_Chr1g0194301 51.818 110 47 1 12 121 33 136 2.62e-36 130
Msa0156330 MtrunA17_Chr8g0360111 52.778 108 45 1 11 118 24 125 4.58e-36 129
Msa0156330 MtrunA17_Chr4g0030881 51.818 110 52 1 13 121 8 117 4.44e-35 127
Msa0156330 MtrunA17_Chr4g0068921 55.046 109 43 1 12 120 24 126 7.31e-35 124
Msa0156330 MtrunA17_Chr1g0192411 50.000 110 49 1 12 121 12 115 1.28e-33 126
Msa0156330 MtrunA17_Chr2g0293911 54.128 109 44 1 12 120 24 126 1.48e-33 124
Msa0156330 MtrunA17_Chr5g0440781 50.459 109 47 2 13 120 13 115 3.69e-33 120
Msa0156330 MtrunA17_Chr2g0327821 42.953 149 69 2 12 160 6 138 6.89e-33 120
Msa0156330 MtrunA17_Chr5g0440761 50.459 109 47 2 13 120 13 115 1.61e-32 120
Msa0156330 MtrunA17_Chr5g0441141 50.459 109 47 2 13 120 13 115 2.06e-32 120
Msa0156330 MtrunA17_Chr5g0395221 59.574 94 32 1 1 94 1 88 3.12e-32 114
Msa0156330 MtrunA17_Chr5g0441131 47.706 109 50 2 13 120 10 112 5.28e-31 114
Msa0156330 MtrunA17_Chr3g0133601 50.000 108 47 2 14 121 37 137 6.67e-30 112
Msa0156330 MtrunA17_Chr8g0342531 52.632 95 39 1 1 95 1 89 1.23e-29 110
Msa0156330 MtrunA17_Chr4g0013361 41.606 137 70 4 8 142 6 134 2.40e-29 112
Msa0156330 MtrunA17_Chr8g0342511 52.688 93 38 1 1 93 1 87 2.47e-29 107
Msa0156330 MtrunA17_Chr8g0334881 45.000 120 55 4 8 123 6 118 3.70e-29 112
Msa0156330 MtrunA17_Chr3g0099141 53.933 89 35 1 12 100 40 122 4.10e-29 107
Msa0156330 MtrunA17_Chr6g0454921 49.074 108 48 2 14 121 15 115 2.64e-28 107
Msa0156330 MtrunA17_Chr4g0008551 42.336 137 68 3 14 146 38 167 3.20e-28 110
Msa0156330 MtrunA17_Chr8g0342461 52.083 96 39 2 1 95 1 90 8.57e-28 104
Msa0156330 MtrunA17_Chr5g0401731 48.148 108 49 2 14 121 15 115 8.59e-28 109
Msa0156330 MtrunA17_Chr8g0342471 52.083 96 39 2 1 95 1 90 3.25e-27 102
Msa0156330 MtrunA17_Chr4g0053431 46.429 112 45 2 14 121 5 105 1.33e-26 105
Msa0156330 MtrunA17_Chr3g0117511 38.854 157 70 4 3 157 170 302 2.57e-26 107
Msa0156330 MtrunA17_Chr7g0229101 60.563 71 28 0 49 119 3 73 4.33e-26 102
Msa0156330 MtrunA17_Chr5g0434901 62.121 66 25 0 54 119 9 74 1.02e-25 98.2
Msa0156330 MtrunA17_Chr7g0229131 46.078 102 51 1 47 148 1 98 2.27e-25 99.0
Msa0156330 MtrunA17_Chr5g0429661 34.579 214 107 9 12 220 120 305 8.79e-25 101
Msa0156330 MtrunA17_Chr5g0425591 50.000 88 37 2 13 99 10 91 1.19e-24 94.7
Msa0156330 MtrunA17_Chr7g0238631 40.397 151 79 4 12 158 111 254 1.64e-24 102
Msa0156330 MtrunA17_Chr7g0238631 35.849 106 60 4 14 118 61 159 7.86e-12 65.5
Msa0156330 MtrunA17_Chr3g0139671 37.762 143 66 3 12 138 83 218 2.68e-24 102
Msa0156330 MtrunA17_Chr3g0139671 35.849 106 60 3 14 118 33 131 1.83e-13 70.5
Msa0156330 MtrunA17_Chr6g0480581 45.794 107 51 2 14 120 4 103 3.98e-24 97.8
Msa0156330 MtrunA17_Chr4g0058991 35.256 156 76 4 3 157 197 328 8.42e-24 100
Msa0156330 MtrunA17_Chr1g0157731 41.441 111 58 2 12 122 89 192 1.40e-23 100
Msa0156330 MtrunA17_Chr1g0157731 33.962 106 62 3 14 118 39 137 1.80e-12 67.4
Msa0156330 MtrunA17_Chr4g0042501 35.211 142 81 3 14 155 105 235 1.78e-23 99.0
Msa0156330 MtrunA17_Chr6g0453751 46.465 99 38 3 10 99 18 110 6.90e-23 91.3
Msa0156330 MtrunA17_Chr5g0417621 36.957 138 76 3 14 151 134 260 8.39e-23 97.1
Msa0156330 MtrunA17_Chr7g0228531 31.169 231 126 8 14 241 220 420 1.12e-21 94.0
Msa0156330 MtrunA17_Chr3g0093811 51.351 74 36 0 49 122 13 86 1.12e-20 89.0
Msa0156330 MtrunA17_Chr6g0460661 42.857 105 49 2 14 116 16 111 3.84e-20 85.1
Msa0156330 MtrunA17_Chr7g0228401 41.593 113 56 3 25 137 290 392 4.82e-20 89.7
Msa0156330 MtrunA17_Chr1g0177901 36.601 153 86 4 24 176 4 145 9.66e-20 85.1
Msa0156330 MtrunA17_Chr5g0437321 41.905 105 54 2 14 118 19 116 1.05e-19 86.7
Msa0156330 MtrunA17_Chr7g0254261 42.593 108 55 2 14 121 89 189 1.12e-19 87.4
Msa0156330 MtrunA17_Chr3g0125801 40.351 114 61 2 8 121 10 116 1.26e-19 86.7
Msa0156330 MtrunA17_Chr7g0247141 67.347 49 15 1 1 48 1 49 9.53e-19 78.2
Msa0156330 MtrunA17_Chr5g0397841 43.689 103 51 2 12 114 108 203 1.55e-18 85.1
Msa0156330 MtrunA17_Chr6g0460671 39.815 108 58 1 14 121 99 199 3.44e-18 83.2
Msa0156330 MtrunA17_Chr7g0228481 29.487 234 126 9 14 241 220 420 4.60e-18 83.6
Msa0156330 MtrunA17_Chr7g0233061 33.793 145 82 4 14 158 180 310 1.79e-17 81.3
Msa0156330 MtrunA17_Chr5g0416341 33.758 157 91 4 17 167 29 178 3.23e-17 81.3
Msa0156330 MtrunA17_Chr7g0238651 36.190 105 63 1 17 121 10 110 4.46e-17 80.1
Msa0156330 MtrunA17_Chr8g0362231 36.000 125 69 3 17 141 25 138 3.77e-16 77.8
Msa0156330 MtrunA17_Chr5g0434871 57.778 45 19 0 80 124 2 46 9.75e-15 67.8
Msa0156330 MtrunA17_Chr1g0193901 45.263 95 44 3 10 102 9 97 1.29e-14 68.6
Msa0156330 MtrunA17_Chr1g0193891 45.263 95 44 3 10 102 9 97 1.29e-14 68.6
Msa0156330 MtrunA17_Chr1g0193871 45.263 95 44 3 10 102 9 97 1.29e-14 68.6
Msa0156330 MtrunA17_Chr1g0193881 45.263 95 44 3 10 102 9 97 1.29e-14 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0156330 AT3G23250.1 50.345 290 122 7 1 277 1 281 3.40e-82 249
Msa0156330 AT2G31180.1 47.902 286 106 9 1 280 1 249 6.33e-73 224
Msa0156330 AT1G06180.1 46.713 289 102 10 1 280 1 246 6.88e-70 216
Msa0156330 AT1G16490.1 71.200 125 30 1 3 127 5 123 1.02e-62 199
Msa0156330 AT4G21440.1 71.545 123 29 1 1 123 1 117 1.01e-61 199
Msa0156330 AT3G61250.1 68.548 124 33 1 1 124 1 118 3.23e-60 193
Msa0156330 AT1G79180.1 56.497 177 61 5 3 176 5 168 6.93e-60 192
Msa0156330 AT4G05100.1 70.968 124 29 2 1 123 1 118 3.28e-59 191
Msa0156330 AT4G28110.1 67.200 125 35 1 1 125 1 119 1.44e-58 188
Msa0156330 AT5G16770.4 68.293 123 33 1 1 123 1 117 2.36e-58 189
Msa0156330 AT5G16770.3 68.293 123 33 1 1 123 1 117 2.36e-58 189
Msa0156330 AT5G16770.1 68.293 123 33 1 1 123 1 117 5.51e-58 189
Msa0156330 AT5G16770.2 68.293 123 33 1 1 123 1 117 5.51e-58 189
Msa0156330 AT1G79180.2 50.490 204 64 6 3 176 5 201 1.24e-57 187
Msa0156330 AT1G56160.1 68.333 120 32 1 3 122 5 118 1.31e-57 186
Msa0156330 AT3G02940.2 66.667 123 35 1 1 123 1 117 3.05e-57 186
Msa0156330 AT3G02940.1 66.667 123 35 1 1 123 1 117 6.55e-57 186
Msa0156330 AT3G02940.3 66.667 123 35 1 1 123 1 117 6.55e-57 186
Msa0156330 AT1G34670.1 68.293 123 33 1 1 123 1 117 7.28e-57 187
Msa0156330 AT3G01140.2 67.480 123 34 1 1 123 1 117 1.79e-56 185
Msa0156330 AT1G35515.1 47.291 203 80 4 1 197 1 182 2.12e-56 181
Msa0156330 AT3G12820.1 46.847 222 105 5 3 217 5 220 8.00e-56 180
Msa0156330 AT5G15310.1 67.480 123 34 1 1 123 1 117 9.07e-56 182
Msa0156330 AT5G15310.2 67.480 123 34 1 1 123 1 117 1.37e-55 182
Msa0156330 AT5G65230.1 67.480 123 34 1 1 123 1 117 1.44e-55 182
Msa0156330 AT3G01140.1 66.667 123 35 1 1 123 44 160 1.68e-55 184
Msa0156330 AT5G15310.4 67.480 123 34 1 1 123 1 117 1.80e-55 179
Msa0156330 AT2G16720.1 65.323 124 37 1 1 124 1 118 1.87e-55 180
Msa0156330 AT5G10280.1 65.854 123 36 1 1 123 1 117 1.88e-55 182
Msa0156330 AT4G38620.1 64.516 124 38 1 1 124 1 118 1.55e-54 178
Msa0156330 AT1G22640.1 60.902 133 45 2 1 133 1 126 2.51e-54 177
Msa0156330 AT3G13540.1 40.562 249 118 7 4 236 15 249 4.42e-54 176
Msa0156330 AT5G49330.1 65.574 122 36 1 1 122 1 116 5.77e-54 178
Msa0156330 AT4G09460.1 62.903 124 40 1 1 124 1 118 7.15e-54 175
Msa0156330 AT5G16600.1 44.550 211 101 4 1 205 1 201 1.19e-53 177
Msa0156330 AT5G60890.1 55.034 149 57 2 1 145 1 143 2.30e-53 176
Msa0156330 AT4G17785.2 62.903 124 39 2 1 123 1 118 3.66e-53 177
Msa0156330 AT4G17785.1 62.903 124 39 2 1 123 1 118 4.47e-53 177
Msa0156330 AT5G61420.2 65.041 123 37 1 1 123 1 117 5.59e-53 177
Msa0156330 AT4G22680.1 43.290 231 106 7 1 223 1 214 7.32e-53 173
Msa0156330 AT5G07690.1 64.516 124 38 1 1 124 1 118 1.15e-52 175
Msa0156330 AT2G47460.1 62.903 124 40 1 1 124 1 118 3.09e-52 175
Msa0156330 AT5G62470.1 62.698 126 40 1 1 126 1 119 3.20e-52 174
Msa0156330 AT4G12350.1 38.636 264 131 7 1 247 1 250 3.88e-52 172
Msa0156330 AT5G62470.2 62.698 126 41 1 1 126 1 120 5.48e-52 174
Msa0156330 AT3G28910.1 60.938 128 44 1 1 128 1 122 7.57e-52 172
Msa0156330 AT3G62610.1 63.115 122 39 1 1 122 1 116 2.72e-51 172
Msa0156330 AT4G34990.1 63.415 123 39 1 1 123 1 117 3.03e-51 169
Msa0156330 AT1G57560.1 54.605 152 62 2 1 152 1 145 3.86e-51 170
Msa0156330 AT1G18570.1 62.903 124 39 2 1 123 1 118 1.04e-50 170
Msa0156330 AT3G47600.1 60.630 127 44 1 1 127 1 121 1.09e-50 170
Msa0156330 AT1G74080.1 61.789 123 41 1 1 123 1 117 1.16e-50 170
Msa0156330 AT5G07700.1 62.903 124 40 1 1 124 1 118 1.48e-50 169
Msa0156330 AT5G07700.2 62.903 124 40 1 1 124 1 118 1.48e-50 169
Msa0156330 AT1G74650.1 62.602 123 40 1 1 123 1 117 2.78e-50 169
Msa0156330 AT1G66230.1 50.617 162 69 3 1 158 1 155 3.65e-50 167
Msa0156330 AT1G08810.1 44.390 205 100 4 1 202 1 194 6.17e-50 166
Msa0156330 AT1G57560.2 60.976 123 42 1 1 123 1 117 6.89e-50 166
Msa0156330 AT5G54230.1 68.750 112 29 1 12 123 12 117 1.32e-49 166
Msa0156330 AT4G01680.2 60.938 128 44 1 1 122 1 128 5.63e-49 166
Msa0156330 AT5G26660.1 61.475 122 41 1 1 122 1 116 1.14e-48 165
Msa0156330 AT5G14340.1 42.180 211 109 4 1 207 13 214 1.29e-48 162
Msa0156330 AT4G01680.3 62.295 122 40 1 1 122 1 116 1.80e-48 161
Msa0156330 AT5G56110.1 62.295 122 40 1 1 122 1 116 2.83e-48 163
Msa0156330 AT4G01680.1 62.295 122 40 1 1 122 1 116 4.07e-48 163
Msa0156330 AT1G09540.1 49.143 175 77 3 1 169 1 169 5.97e-48 164
Msa0156330 AT5G62320.1 50.000 148 58 3 3 143 4 142 4.66e-47 158
Msa0156330 AT4G37780.1 56.452 124 47 2 1 123 1 118 1.01e-46 159
Msa0156330 AT5G57620.1 59.677 124 43 2 1 123 1 118 6.03e-46 157
Msa0156330 AT3G49690.1 59.200 125 44 2 1 124 1 119 9.87e-46 156
Msa0156330 AT3G13890.1 55.556 126 53 2 1 123 1 126 2.53e-45 157
Msa0156330 AT3G12720.1 57.143 119 45 1 6 124 16 128 3.36e-45 155
Msa0156330 AT3G13890.2 56.098 123 48 1 1 123 1 117 3.66e-45 156
Msa0156330 AT5G65790.1 58.400 125 45 2 1 124 1 119 5.87e-45 156
Msa0156330 AT5G23000.1 46.784 171 80 4 1 166 1 165 1.51e-44 154
Msa0156330 AT2G32460.1 57.895 114 42 1 8 121 14 121 2.00e-43 154
Msa0156330 AT5G35550.1 59.664 119 42 1 12 130 14 126 5.36e-43 147
Msa0156330 AT1G18710.1 57.377 122 46 1 1 122 1 116 5.43e-43 148
Msa0156330 AT2G36890.1 46.746 169 83 2 1 168 1 163 6.37e-43 149
Msa0156330 AT2G32460.2 58.036 112 41 1 10 121 4 109 7.61e-43 152
Msa0156330 AT5G14750.1 57.273 110 41 1 13 122 17 120 8.95e-43 145
Msa0156330 AT1G74430.1 52.899 138 55 2 1 134 1 132 9.75e-43 147
Msa0156330 AT3G23250.2 43.612 227 112 6 64 277 1 224 1.37e-42 145
Msa0156330 AT2G36890.2 46.746 169 83 2 1 168 42 204 1.68e-42 149
Msa0156330 AT5G40330.1 56.364 110 42 1 13 122 13 116 3.37e-42 144
Msa0156330 AT3G28470.1 56.897 116 44 1 1 116 1 110 3.39e-42 147
Msa0156330 AT1G63910.1 54.918 122 49 1 1 122 1 116 6.29e-42 148
Msa0156330 AT5G06100.1 56.757 111 42 1 11 121 31 135 1.74e-41 148
Msa0156330 AT5G06100.5 56.757 111 42 1 11 121 31 135 5.97e-41 148
Msa0156330 AT5G06100.2 56.757 111 42 1 11 121 31 135 5.97e-41 148
Msa0156330 AT5G06100.3 56.757 111 42 1 11 121 31 135 5.97e-41 148
Msa0156330 AT5G06100.4 56.757 111 42 1 11 121 31 135 5.97e-41 148
Msa0156330 AT5G40350.1 38.967 213 101 8 12 220 17 204 9.15e-41 140
Msa0156330 AT3G27920.1 53.448 116 48 1 8 123 10 119 1.08e-40 140
Msa0156330 AT3G11440.2 54.622 119 44 2 7 121 32 144 1.71e-40 146
Msa0156330 AT5G52600.1 41.148 209 97 5 9 208 9 200 1.87e-40 139
Msa0156330 AT5G12870.1 56.198 121 47 1 2 122 8 122 1.88e-40 142
Msa0156330 AT5G55020.1 56.757 111 42 1 12 122 26 130 2.21e-40 147
Msa0156330 AT3G11440.3 54.622 119 44 2 7 121 32 144 4.64e-40 146
Msa0156330 AT3G11440.4 54.622 119 44 2 7 121 32 144 4.64e-40 146
Msa0156330 AT3G11440.1 54.622 119 44 2 7 121 32 144 4.64e-40 146
Msa0156330 AT3G01530.1 51.613 124 54 1 8 131 21 138 5.72e-40 138
Msa0156330 AT4G25560.1 58.974 117 42 1 13 129 11 121 1.07e-39 140
Msa0156330 AT3G27810.1 55.856 111 43 1 12 122 20 124 1.34e-39 138
Msa0156330 AT4G13480.1 48.872 133 56 2 13 145 7 127 1.58e-39 139
Msa0156330 AT1G68320.1 43.850 187 94 4 12 193 19 199 1.69e-39 139
Msa0156330 AT3G08500.1 57.895 114 42 1 9 122 27 134 1.80e-39 140
Msa0156330 AT3G24310.1 50.000 132 58 2 9 140 15 138 2.37e-39 139
Msa0156330 AT5G52260.1 56.000 125 49 1 1 125 1 119 6.84e-39 137
Msa0156330 AT3G30210.1 50.769 130 51 2 11 140 26 142 1.24e-38 137
Msa0156330 AT4G26930.1 54.128 109 44 1 12 120 19 121 1.51e-38 139
Msa0156330 AT2G26960.1 54.464 112 45 1 9 120 17 122 2.19e-38 140
Msa0156330 AT1G25340.1 55.085 118 45 2 13 128 19 130 4.51e-38 135
Msa0156330 AT1G48000.1 45.513 156 73 4 12 161 32 181 6.06e-37 131
Msa0156330 AT2G47190.1 51.754 114 49 1 8 121 16 123 1.32e-36 131
Msa0156330 AT1G66370.1 52.679 112 47 1 10 121 6 111 3.55e-36 129
Msa0156330 AT3G46130.1 50.000 114 51 1 8 121 5 112 1.31e-35 128
Msa0156330 AT1G25340.2 52.542 118 43 2 13 128 19 125 2.61e-35 128
Msa0156330 AT1G66380.1 55.357 112 44 1 10 121 6 111 3.78e-35 124
Msa0156330 AT5G59780.3 51.376 109 47 1 13 121 9 111 4.03e-35 126
Msa0156330 AT1G25340.3 52.542 118 43 2 13 128 19 125 4.18e-35 128
Msa0156330 AT3G12820.2 44.186 172 89 4 53 217 1 172 6.82e-35 124
Msa0156330 AT1G56650.1 34.874 238 128 6 10 236 6 227 1.03e-34 126
Msa0156330 AT3G48920.1 51.786 112 48 1 9 120 15 120 1.30e-34 126
Msa0156330 AT1G66390.1 55.357 112 44 1 10 121 6 111 2.90e-34 125
Msa0156330 AT3G53200.1 52.727 110 46 1 12 121 9 112 6.69e-33 121
Msa0156330 AT5G35550.2 63.529 85 31 0 46 130 45 129 6.69e-33 121
Msa0156330 AT3G06490.1 55.046 109 43 1 12 120 19 121 9.26e-33 122
Msa0156330 AT5G26660.2 72.222 72 20 0 51 122 14 85 1.16e-32 122
Msa0156330 AT5G14750.3 58.824 85 34 1 38 122 3 86 1.48e-32 118
Msa0156330 AT5G49620.1 52.212 113 48 1 8 120 22 128 1.99e-32 121
Msa0156330 AT3G60460.1 44.355 124 59 4 7 128 6 121 1.08e-29 114
Msa0156330 AT5G40350.2 60.000 75 30 0 51 125 5 79 8.85e-29 108
Msa0156330 AT5G49620.2 46.457 127 48 2 8 120 22 142 9.54e-29 112
Msa0156330 AT3G47600.2 63.636 77 28 0 51 127 39 115 1.41e-28 111
Msa0156330 AT3G27810.2 59.459 74 30 0 49 122 2 75 1.76e-28 107
Msa0156330 AT2G26950.1 46.226 106 51 1 9 114 13 112 1.37e-27 110
Msa0156330 AT4G37260.1 48.148 108 49 2 14 121 13 113 2.73e-27 108
Msa0156330 AT3G46130.3 61.111 72 28 0 50 121 9 80 2.89e-27 105
Msa0156330 AT5G59780.2 61.972 71 27 0 51 121 20 90 4.79e-27 105
Msa0156330 AT2G23290.1 48.148 108 49 2 14 121 13 113 4.94e-27 107
Msa0156330 AT3G46130.4 61.972 71 27 0 51 121 20 90 6.79e-27 105
Msa0156330 AT3G53200.2 61.538 78 28 1 46 121 2 79 9.72e-27 103
Msa0156330 AT3G50060.1 39.744 156 83 3 14 165 6 154 1.33e-26 105
Msa0156330 AT3G55730.1 41.558 154 67 4 14 151 56 202 2.32e-26 107
Msa0156330 AT1G66380.3 60.526 76 30 0 46 121 3 78 3.03e-26 99.8
Msa0156330 AT5G67300.1 38.158 152 85 3 14 165 6 148 9.11e-26 103
Msa0156330 AT3G09230.1 43.243 111 56 1 14 124 55 158 1.22e-25 105
Msa0156330 AT3G09370.3 40.385 156 73 5 12 154 141 289 3.08e-25 105
Msa0156330 AT3G09370.3 35.849 106 60 3 14 118 91 189 6.56e-13 68.9
Msa0156330 AT3G09370.2 40.385 156 73 5 12 154 133 281 3.21e-25 104
Msa0156330 AT3G09370.2 35.849 106 60 3 14 118 83 181 6.81e-13 68.9
Msa0156330 AT3G09370.1 41.958 143 64 4 12 142 128 263 3.22e-25 104
Msa0156330 AT3G09370.1 35.849 106 60 3 14 118 78 176 6.96e-13 68.9
Msa0156330 AT2G39880.1 47.321 112 44 2 14 121 50 150 3.34e-25 103
Msa0156330 AT1G22640.3 62.857 70 25 1 64 133 1 69 9.23e-25 98.6
Msa0156330 AT5G40360.1 31.868 182 92 4 8 189 152 301 1.63e-24 101
Msa0156330 AT5G11510.3 44.144 111 55 2 12 122 79 182 3.29e-24 102
Msa0156330 AT5G11510.1 44.144 111 55 2 12 122 79 182 3.29e-24 102
Msa0156330 AT5G11510.4 44.144 111 55 2 12 122 79 182 3.29e-24 102
Msa0156330 AT4G18770.1 36.842 152 68 4 8 157 211 336 3.96e-24 101
Msa0156330 AT3G27785.1 45.794 107 51 2 8 114 183 282 4.12e-24 101
Msa0156330 AT5G02320.1 39.610 154 83 4 12 162 125 271 4.43e-24 101
Msa0156330 AT5G02320.1 34.906 106 61 3 14 118 75 173 1.87e-12 67.4
Msa0156330 AT5G02320.2 39.610 154 83 4 12 162 125 271 4.43e-24 101
Msa0156330 AT5G02320.2 34.906 106 61 3 14 118 75 173 1.87e-12 67.4
Msa0156330 AT5G02320.3 39.610 154 83 4 12 162 65 211 5.02e-24 101
Msa0156330 AT5G02320.3 33.962 106 62 3 14 118 15 113 2.66e-12 67.0
Msa0156330 AT5G11510.2 44.144 111 55 2 12 122 79 182 5.19e-24 102
Msa0156330 AT5G11510.5 44.144 111 55 2 12 122 79 182 5.22e-24 102
Msa0156330 AT1G17950.1 45.370 108 52 2 14 121 5 105 1.55e-23 96.7
Msa0156330 AT5G58850.1 40.945 127 60 3 10 128 101 220 5.46e-23 97.8
Msa0156330 AT4G33450.1 39.496 119 60 2 3 121 13 119 5.81e-23 95.1
Msa0156330 AT4G32730.5 41.441 111 58 2 12 122 85 188 1.29e-22 97.8
Msa0156330 AT4G32730.5 35.849 106 60 3 14 118 35 133 1.28e-13 71.2
Msa0156330 AT4G32730.4 41.441 111 58 2 12 122 85 188 1.29e-22 97.8
Msa0156330 AT4G32730.4 35.849 106 60 3 14 118 35 133 1.28e-13 71.2
Msa0156330 AT4G32730.3 41.441 111 58 2 12 122 85 188 1.29e-22 97.8
Msa0156330 AT4G32730.3 35.849 106 60 3 14 118 35 133 1.28e-13 71.2
Msa0156330 AT4G32730.2 41.441 111 58 2 12 122 85 188 1.29e-22 97.8
Msa0156330 AT4G32730.2 35.849 106 60 3 14 118 35 133 1.28e-13 71.2
Msa0156330 AT4G32730.1 41.441 111 58 2 12 122 85 188 1.41e-22 97.8
Msa0156330 AT4G32730.1 35.849 106 60 3 14 118 35 133 1.33e-13 71.2
Msa0156330 AT5G14750.4 61.017 59 23 0 64 122 1 59 2.94e-22 90.5
Msa0156330 AT5G14750.2 61.017 59 23 0 64 122 1 59 2.94e-22 90.5
Msa0156330 AT5G11050.1 32.536 209 114 6 10 207 101 293 3.55e-22 95.5
Msa0156330 AT1G69560.2 32.075 159 96 3 9 167 118 264 1.10e-21 93.2
Msa0156330 AT1G69560.1 39.474 114 62 2 9 122 102 208 1.11e-21 93.2
Msa0156330 AT1G66380.2 50.562 89 38 1 10 98 6 88 1.21e-21 87.8
Msa0156330 AT1G71030.2 55.224 67 30 0 57 123 5 71 1.27e-21 89.7
Msa0156330 AT1G71030.1 55.224 67 30 0 57 123 19 85 1.70e-21 89.7
Msa0156330 AT3G29020.1 39.450 109 59 2 14 122 65 166 2.00e-21 90.5
Msa0156330 AT1G73410.1 45.370 108 52 2 14 121 6 106 4.12e-21 90.1
Msa0156330 AT3G29020.2 39.450 109 59 2 14 122 67 168 5.05e-21 90.9
Msa0156330 AT1G18960.1 42.623 122 57 5 1 122 1 109 5.74e-21 90.9
Msa0156330 AT1G73410.2 45.370 108 52 2 14 121 6 106 1.04e-20 87.8
Msa0156330 AT5G17800.1 39.815 108 58 1 14 121 93 193 1.29e-20 90.1
Msa0156330 AT1G26780.2 40.909 110 58 2 12 121 96 198 1.76e-20 90.1
Msa0156330 AT1G26780.1 40.909 110 58 2 12 121 96 198 1.77e-20 89.0
Msa0156330 AT4G00540.2 39.474 114 59 3 12 122 101 207 6.29e-18 83.2
Msa0156330 AT4G00540.2 32.110 109 68 2 14 118 46 152 9.25e-12 65.1
Msa0156330 AT2G25230.1 39.316 117 63 3 8 124 20 128 6.30e-18 81.3
Msa0156330 AT5G39700.1 39.450 109 59 1 8 116 50 151 7.36e-18 80.1
Msa0156330 AT4G00540.1 39.474 114 59 3 12 122 99 205 1.10e-17 82.8
Msa0156330 AT4G00540.1 32.110 109 68 2 14 118 44 150 1.45e-11 64.7
Msa0156330 AT1G14350.2 39.024 123 67 3 17 138 28 143 1.89e-17 82.0
Msa0156330 AT1G14350.1 39.024 123 67 3 17 138 28 143 1.89e-17 82.0
Msa0156330 AT2G37630.1 37.143 105 62 1 17 121 7 107 2.60e-17 81.3
Msa0156330 AT4G25560.2 64.815 54 19 0 76 129 2 55 2.79e-16 76.3
Msa0156330 AT2G02820.3 39.048 105 57 2 17 121 33 130 1.33e-15 76.3
Msa0156330 AT2G02820.2 39.048 105 57 2 17 121 33 130 1.61e-15 76.6
Msa0156330 AT2G02820.1 39.048 105 57 2 17 121 33 130 1.74e-15 76.6
Msa0156330 AT5G40430.1 34.746 118 68 4 7 124 47 155 2.19e-14 71.6
Msa0156330 AT1G16490.2 48.750 80 36 3 83 161 12 87 3.57e-13 67.4
Msa0156330 AT5G59780.1 60.465 43 17 0 79 121 4 46 9.45e-13 65.5
Msa0156330 AT3G46130.2 60.465 43 17 0 79 121 4 46 1.51e-12 65.5
Msa0156330 AT1G14350.3 43.590 78 43 1 62 138 23 100 2.66e-11 63.9
Msa0156330 AT1G14350.4 43.590 78 43 1 62 138 23 100 2.66e-11 63.9
Msa0156330 AT3G18100.3 35.294 102 59 2 13 114 497 591 4.84e-11 63.5
Msa0156330 AT3G18100.1 35.294 102 59 2 13 114 545 639 4.88e-11 63.5
Msa0156330 AT3G18100.4 35.294 102 59 2 13 114 384 478 5.75e-11 63.2
Msa0156330 AT3G18100.2 35.294 102 59 2 13 114 332 426 6.78e-11 63.2
Msa0156330 AT5G61420.1 70.270 37 11 0 87 123 2 38 7.75e-11 62.0

Find 55 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGCTATGTCCATGTTTA+TGG 0.144672 1_4:+22339046 None:intergenic
TGAATTGGGTTGGTTATTAT+TGG 0.183197 1_4:+22337899 None:intergenic
CATCATTATCAAAAGGGTTT+TGG 0.220517 1_4:+22337520 None:intergenic
ATTTCAAGGAAATGATTATT+AGG 0.271167 1_4:+22337786 None:intergenic
ATTTCATTGTCTGTTCTTCC+AGG 0.290962 1_4:+22337966 None:intergenic
TAATAATCATTTCCTTGAAA+TGG 0.309003 1_4:-22337784 Msa0156330:CDS
TTAAAATTGTATTGTTGATC+TGG 0.320458 1_4:+22337561 None:intergenic
AAATTTCCTCTCTTAATATC+AGG 0.325119 1_4:+22338801 None:intergenic
TGATGATGATATGATGTAAA+AGG 0.325400 1_4:-22337295 Msa0156330:three_prime_UTR
GAACAAATACCTGCATGTTT+TGG 0.334771 1_4:+22339012 None:intergenic
TTGAAATTGATGAAAGCTTT+TGG 0.341700 1_4:-22337656 Msa0156330:CDS
TTTAATTTGTTCGTTTCAAT+AGG 0.345261 1_4:-22337351 Msa0156330:three_prime_UTR
TTGTAACAGATTATATCATT+AGG 0.363648 1_4:-22337204 Msa0156330:intron
ATGATGTAGTTTCCATTTCA+AGG 0.368426 1_4:+22337772 None:intergenic
GAGGATTTCATCTTCCTCTA+AGG 0.392145 1_4:+22339080 None:intergenic
ATTGTCACAAATGAATCTTC+AGG 0.397071 1_4:+22337681 None:intergenic
GAAAGGTCCTTGGACCTTAG+AGG 0.415056 1_4:-22339094 Msa0156330:CDS
TGCATGAGTCACTGGGGAAC+AGG 0.418688 1_4:-22338746 Msa0156330:intron
TTGAGTTATAGTGCTGGAAT+TGG 0.424977 1_4:+22337830 None:intergenic
CATCAAGATGCATGAGTCAC+TGG 0.430430 1_4:-22338754 Msa0156330:CDS
GAAACTGTCATAGAATTTGA+AGG 0.435165 1_4:+22337594 None:intergenic
TGATTATTAGGACTATTAGA+AGG 0.435165 1_4:+22337798 None:intergenic
ATGCCATCATCATTATCAAA+AGG 0.440486 1_4:+22337513 None:intergenic
GGCTCCTTGTTGTGAAAAGA+AGG 0.442620 1_4:-22339124 Msa0156330:CDS
CATTGTCATTCATTAGTAAA+GGG 0.443938 1_4:-22337318 Msa0156330:three_prime_UTR
GCCATAGCAGCAAAATTGCC+TGG 0.464914 1_4:-22337984 Msa0156330:CDS
ATAAACATGGACATAGCAAT+TGG 0.477198 1_4:-22339044 Msa0156330:CDS
ACATTGTCATTCATTAGTAA+AGG 0.478378 1_4:-22337319 Msa0156330:three_prime_UTR
TATAACGTGTTTATCACATC+AGG 0.479931 1_4:-22337480 Msa0156330:CDS
TGCCATCATCATTATCAAAA+GGG 0.487704 1_4:+22337514 None:intergenic
AGGGATTGAAGAAAGGTCCT+TGG 0.510096 1_4:-22339104 Msa0156330:CDS
GTTCGTTTCAATAGGCGAAA+GGG 0.515285 1_4:-22337343 Msa0156330:three_prime_UTR
ATGATGTAAGTCTAAAACTC+AGG 0.524939 1_4:+22337441 None:intergenic
TTTGCAGGTTTATTAAGATG+TGG 0.531442 1_4:-22338861 Msa0156330:CDS
GATGATGATATGATGTAAAA+GGG 0.533575 1_4:-22337294 Msa0156330:three_prime_UTR
TGTTCGTTTCAATAGGCGAA+AGG 0.537267 1_4:-22337344 Msa0156330:three_prime_UTR
ATCAAGATGCATGAGTCACT+GGG 0.537633 1_4:-22338753 Msa0156330:CDS
TTTGAATACTTCACATAACT+CGG 0.544237 1_4:+22337144 None:intergenic
GAAAAGAAGGGATTGAAGAA+AGG 0.546107 1_4:-22339111 Msa0156330:CDS
TTGTCACAAATGAATCTTCA+GGG 0.549007 1_4:+22337682 None:intergenic
TCATCTTCCTCTAAGGTCCA+AGG 0.559081 1_4:+22339087 None:intergenic
GAAAGAGTTGTCGATTGAGA+TGG 0.564322 1_4:-22338839 Msa0156330:CDS
TTAAAACCTGATATTAAGAG+AGG 0.565110 1_4:-22338807 Msa0156330:CDS
ATATGATTGAGTTATAGTGC+TGG 0.580781 1_4:+22337824 None:intergenic
GCTCCTTGTTGTGAAAAGAA+GGG 0.589438 1_4:-22339123 Msa0156330:CDS
CTAGACAATTAAACAAAACA+AGG 0.594457 1_4:+22337108 None:intergenic
CATCTTGAAAATGAGACAAG+AGG 0.606998 1_4:+22339152 None:intergenic
CGTGCCCTACCAAAACATGC+AGG 0.611878 1_4:-22339021 Msa0156330:intron
TGTCATAGAATTTGAAGGCA+CGG 0.616610 1_4:+22337599 None:intergenic
ACATCATACATCCATAAACA+TGG 0.617616 1_4:-22339057 Msa0156330:CDS
ATCTTGAAAATGAGACAAGA+GGG 0.618926 1_4:+22339153 None:intergenic
AGTAACACACCATCAAAATG+TGG 0.666486 1_4:+22337416 None:intergenic
GTTTATGGATGTATGATGTG+AGG 0.680177 1_4:+22339061 None:intergenic
CATAGAATTTGAAGGCACGG+TGG 0.716986 1_4:+22337602 None:intergenic
TCAAGATGCATGAGTCACTG+GGG 0.758088 1_4:-22338752 Msa0156330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATATTAATATATAAAA+AGG - chr1_4:22337935-22337954 Msa0156330:CDS 0.0%
!! TATAATATTAATATATAAAA+AGG - chr1_4:22337935-22337954 Msa0156330:CDS 0.0%
!!! TAGATATAATATTATACTTT+TGG - chr1_4:22337394-22337413 Msa0156330:three_prime_UTR 10.0%
!!! AGATATAATATTATACTTTT+GGG - chr1_4:22337395-22337414 Msa0156330:three_prime_UTR 10.0%
!!! TAGATATAATATTATACTTT+TGG - chr1_4:22337394-22337413 Msa0156330:three_prime_UTR 10.0%
!!! AGATATAATATTATACTTTT+GGG - chr1_4:22337395-22337414 Msa0156330:three_prime_UTR 10.0%
!! CTTGATAAATATTACTTTAT+AGG - chr1_4:22337345-22337364 Msa0156330:three_prime_UTR 15.0%
!! ACAATGAAATAAAAAATGTA+TGG - chr1_4:22338375-22338394 Msa0156330:intron 15.0%
!!! ATACAATTTTAATAATTCAG+TGG - chr1_4:22338778-22338797 Msa0156330:CDS 15.0%
!! CTTGATAAATATTACTTTAT+AGG - chr1_4:22337345-22337364 Msa0156330:three_prime_UTR 15.0%
!! ACAATGAAATAAAAAATGTA+TGG - chr1_4:22338375-22338394 Msa0156330:intron 15.0%
!!! ATACAATTTTAATAATTCAG+TGG - chr1_4:22338778-22338797 Msa0156330:CDS 15.0%
!!! ATTATACTTTTGGGATAATT+TGG - chr1_4:22337404-22337423 Msa0156330:three_prime_UTR 20.0%
!!! AAATTTTTCAAATGAAGAAG+AGG - chr1_4:22337544-22337563 Msa0156330:CDS 20.0%
!! AGGTAATACATATATTCAAT+TGG - chr1_4:22337602-22337621 Msa0156330:CDS 20.0%
!!! TTGCAATAAACAACAAATTT+TGG + chr1_4:22338191-22338210 None:intergenic 20.0%
!! TATATTTAATTCTTGCTTTC+AGG - chr1_4:22338315-22338334 Msa0156330:intron 20.0%
!! ATTTCAAGGAAATGATTATT+AGG + chr1_4:22338545-22338564 None:intergenic 20.0%
!! TAATAATCATTTCCTTGAAA+TGG - chr1_4:22338544-22338563 Msa0156330:intron 20.0%
!! TTAAAATTGTATTGTTGATC+TGG + chr1_4:22338770-22338789 None:intergenic 20.0%
!!! TTTAATTTGTTCGTTTCAAT+AGG - chr1_4:22338977-22338996 Msa0156330:intron 20.0%
!! TTGTAACAGATTATATCATT+AGG - chr1_4:22339124-22339143 Msa0156330:CDS 20.0%
!!! ATTATACTTTTGGGATAATT+TGG - chr1_4:22337404-22337423 Msa0156330:three_prime_UTR 20.0%
!!! AAATTTTTCAAATGAAGAAG+AGG - chr1_4:22337544-22337563 Msa0156330:CDS 20.0%
!! AGGTAATACATATATTCAAT+TGG - chr1_4:22337602-22337621 Msa0156330:CDS 20.0%
!!! TTGCAATAAACAACAAATTT+TGG + chr1_4:22338191-22338210 None:intergenic 20.0%
!! TATATTTAATTCTTGCTTTC+AGG - chr1_4:22338315-22338334 Msa0156330:intron 20.0%
!! ATTTCAAGGAAATGATTATT+AGG + chr1_4:22338545-22338564 None:intergenic 20.0%
!! TAATAATCATTTCCTTGAAA+TGG - chr1_4:22338544-22338563 Msa0156330:intron 20.0%
!! TTAAAATTGTATTGTTGATC+TGG + chr1_4:22338770-22338789 None:intergenic 20.0%
!!! TTTAATTTGTTCGTTTCAAT+AGG - chr1_4:22338977-22338996 Msa0156330:intron 20.0%
!! TTGTAACAGATTATATCATT+AGG - chr1_4:22339124-22339143 Msa0156330:CDS 20.0%
!!! TATCTTTTGTGTGTTGATTT+AGG - chr1_4:22337434-22337453 Msa0156330:exon 25.0%
!!! TTAGGTTTTGTAAATTTTGC+AGG - chr1_4:22337452-22337471 Msa0156330:CDS 25.0%
! TTAAAACCTGATATTAAGAG+AGG - chr1_4:22337521-22337540 Msa0156330:CDS 25.0%
! AAATTTCCTCTCTTAATATC+AGG + chr1_4:22337530-22337549 None:intergenic 25.0%
!! AAGACTACAAATTCTGAAAA+AGG + chr1_4:22337658-22337677 None:intergenic 25.0%
! TTAAATCTTAACCTCATAGA+AGG - chr1_4:22337676-22337695 Msa0156330:CDS 25.0%
! TCTATCCAAATTAAGATACT+AGG - chr1_4:22338020-22338039 Msa0156330:intron 25.0%
! AAATGCCTAGTATCTTAATT+TGG + chr1_4:22338028-22338047 None:intergenic 25.0%
!!! TTTTTTGAAGGAAAGATACT+AGG - chr1_4:22338045-22338064 Msa0156330:intron 25.0%
!!! CTCTTTTTGGTATTTGAATT+GGG + chr1_4:22338446-22338465 None:intergenic 25.0%
!!! TCTCTTTTTGGTATTTGAAT+TGG + chr1_4:22338447-22338466 None:intergenic 25.0%
!!! TTGTTTTGATACTCTCTTTT+TGG + chr1_4:22338459-22338478 None:intergenic 25.0%
! TGATTATTAGGACTATTAGA+AGG + chr1_4:22338533-22338552 None:intergenic 25.0%
! TTCATCACAAGGAAAAAATT+TGG - chr1_4:22338604-22338623 Msa0156330:intron 25.0%
!! TTGAAATTGATGAAAGCTTT+TGG - chr1_4:22338672-22338691 Msa0156330:intron 25.0%
! ACATTGTCATTCATTAGTAA+AGG - chr1_4:22339009-22339028 Msa0156330:intron 25.0%
! CATTGTCATTCATTAGTAAA+GGG - chr1_4:22339010-22339029 Msa0156330:intron 25.0%
!! TGATGATGATATGATGTAAA+AGG - chr1_4:22339033-22339052 Msa0156330:CDS 25.0%
! GATGATGATATGATGTAAAA+GGG - chr1_4:22339034-22339053 Msa0156330:CDS 25.0%
! TTTGAATACTTCACATAACT+CGG + chr1_4:22339187-22339206 None:intergenic 25.0%
! CTAGACAATTAAACAAAACA+AGG + chr1_4:22339223-22339242 None:intergenic 25.0%
!!! CTTGTTTTGTTTAATTGTCT+AGG - chr1_4:22339221-22339240 Msa0156330:five_prime_UTR 25.0%
!!! TATCTTTTGTGTGTTGATTT+AGG - chr1_4:22337434-22337453 Msa0156330:exon 25.0%
!!! TTAGGTTTTGTAAATTTTGC+AGG - chr1_4:22337452-22337471 Msa0156330:CDS 25.0%
! TTAAAACCTGATATTAAGAG+AGG - chr1_4:22337521-22337540 Msa0156330:CDS 25.0%
! AAATTTCCTCTCTTAATATC+AGG + chr1_4:22337530-22337549 None:intergenic 25.0%
!! AAGACTACAAATTCTGAAAA+AGG + chr1_4:22337658-22337677 None:intergenic 25.0%
! TTAAATCTTAACCTCATAGA+AGG - chr1_4:22337676-22337695 Msa0156330:CDS 25.0%
! TCTATCCAAATTAAGATACT+AGG - chr1_4:22338020-22338039 Msa0156330:intron 25.0%
! AAATGCCTAGTATCTTAATT+TGG + chr1_4:22338028-22338047 None:intergenic 25.0%
!!! TTTTTTGAAGGAAAGATACT+AGG - chr1_4:22338045-22338064 Msa0156330:intron 25.0%
!!! CTCTTTTTGGTATTTGAATT+GGG + chr1_4:22338446-22338465 None:intergenic 25.0%
!!! TCTCTTTTTGGTATTTGAAT+TGG + chr1_4:22338447-22338466 None:intergenic 25.0%
!!! TTGTTTTGATACTCTCTTTT+TGG + chr1_4:22338459-22338478 None:intergenic 25.0%
! TGATTATTAGGACTATTAGA+AGG + chr1_4:22338533-22338552 None:intergenic 25.0%
! TTCATCACAAGGAAAAAATT+TGG - chr1_4:22338604-22338623 Msa0156330:intron 25.0%
!! TTGAAATTGATGAAAGCTTT+TGG - chr1_4:22338672-22338691 Msa0156330:intron 25.0%
! ACATTGTCATTCATTAGTAA+AGG - chr1_4:22339009-22339028 Msa0156330:intron 25.0%
! CATTGTCATTCATTAGTAAA+GGG - chr1_4:22339010-22339029 Msa0156330:intron 25.0%
!! TGATGATGATATGATGTAAA+AGG - chr1_4:22339033-22339052 Msa0156330:CDS 25.0%
! GATGATGATATGATGTAAAA+GGG - chr1_4:22339034-22339053 Msa0156330:CDS 25.0%
! TTTGAATACTTCACATAACT+CGG + chr1_4:22339187-22339206 None:intergenic 25.0%
! CTAGACAATTAAACAAAACA+AGG + chr1_4:22339223-22339242 None:intergenic 25.0%
ATCTTGAAAATGAGACAAGA+GGG + chr1_4:22337178-22337197 None:intergenic 30.0%
!! TCTCATTTTCAAGATGGTTA+GGG - chr1_4:22337183-22337202 Msa0156330:three_prime_UTR 30.0%
ACATCATACATCCATAAACA+TGG - chr1_4:22337271-22337290 Msa0156330:three_prime_UTR 30.0%
AATTGCTATGTCCATGTTTA+TGG + chr1_4:22337285-22337304 None:intergenic 30.0%
ATAAACATGGACATAGCAAT+TGG - chr1_4:22337284-22337303 Msa0156330:three_prime_UTR 30.0%
TTTGCAGGTTTATTAAGATG+TGG - chr1_4:22337467-22337486 Msa0156330:CDS 30.0%
! TGTTTCTTACAACTGCATTT+TGG - chr1_4:22337785-22337804 Msa0156330:CDS 30.0%
AGTACACAGTATTTAAGTAG+TGG - chr1_4:22337886-22337905 Msa0156330:CDS 30.0%
GTACACAGTATTTAAGTAGT+GGG - chr1_4:22337887-22337906 Msa0156330:CDS 30.0%
TACACAGTATTTAAGTAGTG+GGG - chr1_4:22337888-22337907 Msa0156330:CDS 30.0%
!!! AGATACTAGGCATTTTTTGA+AGG - chr1_4:22338033-22338052 Msa0156330:intron 30.0%
!!! ATTTTGGTTGTATTGATCGT+TGG + chr1_4:22338175-22338194 None:intergenic 30.0%
ATTTAATTCTTGCTTTCAGG+TGG - chr1_4:22338318-22338337 Msa0156330:intron 30.0%
!! TGAATTGGGTTGGTTATTAT+TGG + chr1_4:22338432-22338451 None:intergenic 30.0%
! TTTTGGTATTTGAATTGGGT+TGG + chr1_4:22338442-22338461 None:intergenic 30.0%
ATATGATTGAGTTATAGTGC+TGG + chr1_4:22338507-22338526 None:intergenic 30.0%
ATGATGTAGTTTCCATTTCA+AGG + chr1_4:22338559-22338578 None:intergenic 30.0%
! TCTAGTGATTTTTCATCACA+AGG - chr1_4:22338593-22338612 Msa0156330:intron 30.0%
TTGTCACAAATGAATCTTCA+GGG + chr1_4:22338649-22338668 None:intergenic 30.0%
ATTGTCACAAATGAATCTTC+AGG + chr1_4:22338650-22338669 None:intergenic 30.0%
GAAACTGTCATAGAATTTGA+AGG + chr1_4:22338737-22338756 None:intergenic 30.0%
! CATCATTATCAAAAGGGTTT+TGG + chr1_4:22338811-22338830 None:intergenic 30.0%
!!! AACCCTTTTGATAATGATGA+TGG - chr1_4:22338812-22338831 Msa0156330:CDS 30.0%
TGCCATCATCATTATCAAAA+GGG + chr1_4:22338817-22338836 None:intergenic 30.0%
ATGCCATCATCATTATCAAA+AGG + chr1_4:22338818-22338837 None:intergenic 30.0%
!!! TTTTGATAATGATGATGGCA+TGG - chr1_4:22338817-22338836 Msa0156330:CDS 30.0%
TATAACGTGTTTATCACATC+AGG - chr1_4:22338848-22338867 Msa0156330:CDS 30.0%
! ATGATGTAAGTCTAAAACTC+AGG + chr1_4:22338890-22338909 None:intergenic 30.0%
ATATACTGTGCAAAAACATC+AGG - chr1_4:22339081-22339100 Msa0156330:CDS 30.0%
ATCTTGAAAATGAGACAAGA+GGG + chr1_4:22337178-22337197 None:intergenic 30.0%
!! TCTCATTTTCAAGATGGTTA+GGG - chr1_4:22337183-22337202 Msa0156330:three_prime_UTR 30.0%
ACATCATACATCCATAAACA+TGG - chr1_4:22337271-22337290 Msa0156330:three_prime_UTR 30.0%
AATTGCTATGTCCATGTTTA+TGG + chr1_4:22337285-22337304 None:intergenic 30.0%
ATAAACATGGACATAGCAAT+TGG - chr1_4:22337284-22337303 Msa0156330:three_prime_UTR 30.0%
TTTGCAGGTTTATTAAGATG+TGG - chr1_4:22337467-22337486 Msa0156330:CDS 30.0%
! TGTTTCTTACAACTGCATTT+TGG - chr1_4:22337785-22337804 Msa0156330:CDS 30.0%
AGTACACAGTATTTAAGTAG+TGG - chr1_4:22337886-22337905 Msa0156330:CDS 30.0%
GTACACAGTATTTAAGTAGT+GGG - chr1_4:22337887-22337906 Msa0156330:CDS 30.0%
TACACAGTATTTAAGTAGTG+GGG - chr1_4:22337888-22337907 Msa0156330:CDS 30.0%
!!! AGATACTAGGCATTTTTTGA+AGG - chr1_4:22338033-22338052 Msa0156330:intron 30.0%
!!! ATTTTGGTTGTATTGATCGT+TGG + chr1_4:22338175-22338194 None:intergenic 30.0%
ATTTAATTCTTGCTTTCAGG+TGG - chr1_4:22338318-22338337 Msa0156330:intron 30.0%
!! TGAATTGGGTTGGTTATTAT+TGG + chr1_4:22338432-22338451 None:intergenic 30.0%
! TTTTGGTATTTGAATTGGGT+TGG + chr1_4:22338442-22338461 None:intergenic 30.0%
ATATGATTGAGTTATAGTGC+TGG + chr1_4:22338507-22338526 None:intergenic 30.0%
ATGATGTAGTTTCCATTTCA+AGG + chr1_4:22338559-22338578 None:intergenic 30.0%
! TCTAGTGATTTTTCATCACA+AGG - chr1_4:22338593-22338612 Msa0156330:intron 30.0%
TTGTCACAAATGAATCTTCA+GGG + chr1_4:22338649-22338668 None:intergenic 30.0%
ATTGTCACAAATGAATCTTC+AGG + chr1_4:22338650-22338669 None:intergenic 30.0%
GAAACTGTCATAGAATTTGA+AGG + chr1_4:22338737-22338756 None:intergenic 30.0%
! CATCATTATCAAAAGGGTTT+TGG + chr1_4:22338811-22338830 None:intergenic 30.0%
!!! AACCCTTTTGATAATGATGA+TGG - chr1_4:22338812-22338831 Msa0156330:CDS 30.0%
TGCCATCATCATTATCAAAA+GGG + chr1_4:22338817-22338836 None:intergenic 30.0%
ATGCCATCATCATTATCAAA+AGG + chr1_4:22338818-22338837 None:intergenic 30.0%
!!! TTTTGATAATGATGATGGCA+TGG - chr1_4:22338817-22338836 Msa0156330:CDS 30.0%
TATAACGTGTTTATCACATC+AGG - chr1_4:22338848-22338867 Msa0156330:CDS 30.0%
! ATGATGTAAGTCTAAAACTC+AGG + chr1_4:22338890-22338909 None:intergenic 30.0%
ATATACTGTGCAAAAACATC+AGG - chr1_4:22339081-22339100 Msa0156330:CDS 30.0%
CATCTTGAAAATGAGACAAG+AGG + chr1_4:22337179-22337198 None:intergenic 35.0%
!! CTCTTGTCTCATTTTCAAGA+TGG - chr1_4:22337177-22337196 Msa0156330:three_prime_UTR 35.0%
!! GTCTCATTTTCAAGATGGTT+AGG - chr1_4:22337182-22337201 Msa0156330:three_prime_UTR 35.0%
! AATCCCTTCTTTTCACAACA+AGG + chr1_4:22337211-22337230 None:intergenic 35.0%
GAAAAGAAGGGATTGAAGAA+AGG - chr1_4:22337217-22337236 Msa0156330:intron 35.0%
GTTTATGGATGTATGATGTG+AGG + chr1_4:22337270-22337289 None:intergenic 35.0%
!!! AATACCTGCATGTTTTGGTA+GGG + chr1_4:22337314-22337333 None:intergenic 35.0%
!!! AAATACCTGCATGTTTTGGT+AGG + chr1_4:22337315-22337334 None:intergenic 35.0%
! GAACAAATACCTGCATGTTT+TGG + chr1_4:22337319-22337338 None:intergenic 35.0%
ACACAGTATTTAAGTAGTGG+GGG - chr1_4:22337889-22337908 Msa0156330:CDS 35.0%
! GCAATTCGAATTTTGCTTCT+TGG + chr1_4:22338247-22338266 None:intergenic 35.0%
ATTTCATTGTCTGTTCTTCC+AGG + chr1_4:22338365-22338384 None:intergenic 35.0%
! TTGAGTTATAGTGCTGGAAT+TGG + chr1_4:22338501-22338520 None:intergenic 35.0%
TGTCATAGAATTTGAAGGCA+CGG + chr1_4:22338732-22338751 None:intergenic 35.0%
!!! ATGATGATGGCATGGATTTT+TGG - chr1_4:22338825-22338844 Msa0156330:CDS 35.0%
! ACATCATGACCACATTTTGA+TGG - chr1_4:22338903-22338922 Msa0156330:intron 35.0%
AGTAACACACCATCAAAATG+TGG + chr1_4:22338915-22338934 None:intergenic 35.0%
CATCTTGAAAATGAGACAAG+AGG + chr1_4:22337179-22337198 None:intergenic 35.0%
!! CTCTTGTCTCATTTTCAAGA+TGG - chr1_4:22337177-22337196 Msa0156330:three_prime_UTR 35.0%
!! GTCTCATTTTCAAGATGGTT+AGG - chr1_4:22337182-22337201 Msa0156330:three_prime_UTR 35.0%
! AATCCCTTCTTTTCACAACA+AGG + chr1_4:22337211-22337230 None:intergenic 35.0%
GAAAAGAAGGGATTGAAGAA+AGG - chr1_4:22337217-22337236 Msa0156330:intron 35.0%
GTTTATGGATGTATGATGTG+AGG + chr1_4:22337270-22337289 None:intergenic 35.0%
!!! AATACCTGCATGTTTTGGTA+GGG + chr1_4:22337314-22337333 None:intergenic 35.0%
!!! AAATACCTGCATGTTTTGGT+AGG + chr1_4:22337315-22337334 None:intergenic 35.0%
! GAACAAATACCTGCATGTTT+TGG + chr1_4:22337319-22337338 None:intergenic 35.0%
ACACAGTATTTAAGTAGTGG+GGG - chr1_4:22337889-22337908 Msa0156330:CDS 35.0%
! GCAATTCGAATTTTGCTTCT+TGG + chr1_4:22338247-22338266 None:intergenic 35.0%
ATTTCATTGTCTGTTCTTCC+AGG + chr1_4:22338365-22338384 None:intergenic 35.0%
! TTGAGTTATAGTGCTGGAAT+TGG + chr1_4:22338501-22338520 None:intergenic 35.0%
TGTCATAGAATTTGAAGGCA+CGG + chr1_4:22338732-22338751 None:intergenic 35.0%
!!! ATGATGATGGCATGGATTTT+TGG - chr1_4:22338825-22338844 Msa0156330:CDS 35.0%
! ACATCATGACCACATTTTGA+TGG - chr1_4:22338903-22338922 Msa0156330:intron 35.0%
AGTAACACACCATCAAAATG+TGG + chr1_4:22338915-22338934 None:intergenic 35.0%
! GCTCCTTGTTGTGAAAAGAA+GGG - chr1_4:22337205-22337224 Msa0156330:intron 40.0%
GAGGATTTCATCTTCCTCTA+AGG + chr1_4:22337251-22337270 None:intergenic 40.0%
! GAAAGAGTTGTCGATTGAGA+TGG - chr1_4:22337489-22337508 Msa0156330:CDS 40.0%
ATCAAGATGCATGAGTCACT+GGG - chr1_4:22337575-22337594 Msa0156330:CDS 40.0%
GCATAGTGCTATGTATGTCA+AGG + chr1_4:22338145-22338164 None:intergenic 40.0%
TGTTCGTTTCAATAGGCGAA+AGG - chr1_4:22338984-22339003 Msa0156330:intron 40.0%
GTTCGTTTCAATAGGCGAAA+GGG - chr1_4:22338985-22339004 Msa0156330:intron 40.0%
! GCTCCTTGTTGTGAAAAGAA+GGG - chr1_4:22337205-22337224 Msa0156330:intron 40.0%
GAGGATTTCATCTTCCTCTA+AGG + chr1_4:22337251-22337270 None:intergenic 40.0%
! GAAAGAGTTGTCGATTGAGA+TGG - chr1_4:22337489-22337508 Msa0156330:CDS 40.0%
ATCAAGATGCATGAGTCACT+GGG - chr1_4:22337575-22337594 Msa0156330:CDS 40.0%
GCATAGTGCTATGTATGTCA+AGG + chr1_4:22338145-22338164 None:intergenic 40.0%
TGTTCGTTTCAATAGGCGAA+AGG - chr1_4:22338984-22339003 Msa0156330:intron 40.0%
GTTCGTTTCAATAGGCGAAA+GGG - chr1_4:22338985-22339004 Msa0156330:intron 40.0%
! GGCTCCTTGTTGTGAAAAGA+AGG - chr1_4:22337204-22337223 Msa0156330:intron 45.0%
AGGGATTGAAGAAAGGTCCT+TGG - chr1_4:22337224-22337243 Msa0156330:intron 45.0%
!! TCATCTTCCTCTAAGGTCCA+AGG + chr1_4:22337244-22337263 None:intergenic 45.0%
CATCAAGATGCATGAGTCAC+TGG - chr1_4:22337574-22337593 Msa0156330:CDS 45.0%
TCAAGATGCATGAGTCACTG+GGG - chr1_4:22337576-22337595 Msa0156330:CDS 45.0%
TCAGCTAGCATCCTTCTATG+AGG + chr1_4:22337690-22337709 None:intergenic 45.0%
! TCCAGGCAATTTTGCTGCTA+TGG + chr1_4:22338348-22338367 None:intergenic 45.0%
! CATAGAATTTGAAGGCACGG+TGG + chr1_4:22338729-22338748 None:intergenic 45.0%
! GGCTCCTTGTTGTGAAAAGA+AGG - chr1_4:22337204-22337223 Msa0156330:intron 45.0%
AGGGATTGAAGAAAGGTCCT+TGG - chr1_4:22337224-22337243 Msa0156330:intron 45.0%
!! TCATCTTCCTCTAAGGTCCA+AGG + chr1_4:22337244-22337263 None:intergenic 45.0%
CATCAAGATGCATGAGTCAC+TGG - chr1_4:22337574-22337593 Msa0156330:CDS 45.0%
TCAAGATGCATGAGTCACTG+GGG - chr1_4:22337576-22337595 Msa0156330:CDS 45.0%
TCAGCTAGCATCCTTCTATG+AGG + chr1_4:22337690-22337709 None:intergenic 45.0%
! TCCAGGCAATTTTGCTGCTA+TGG + chr1_4:22338348-22338367 None:intergenic 45.0%
! CATAGAATTTGAAGGCACGG+TGG + chr1_4:22338729-22338748 None:intergenic 45.0%
!!! TTATACAATATATTTTTTTT+AGG - chr1_4:22338098-22338117 Msa0156330:intron 5.0%
!!! TTATACAATATATTTTTTTT+AGG - chr1_4:22338098-22338117 Msa0156330:intron 5.0%
GAAAGGTCCTTGGACCTTAG+AGG - chr1_4:22337234-22337253 Msa0156330:intron 50.0%
GCCATAGCAGCAAAATTGCC+TGG - chr1_4:22338344-22338363 Msa0156330:intron 50.0%
GAAAGGTCCTTGGACCTTAG+AGG - chr1_4:22337234-22337253 Msa0156330:intron 50.0%
GCCATAGCAGCAAAATTGCC+TGG - chr1_4:22338344-22338363 Msa0156330:intron 50.0%
CGTGCCCTACCAAAACATGC+AGG - chr1_4:22337307-22337326 Msa0156330:three_prime_UTR 55.0%
TGCATGAGTCACTGGGGAAC+AGG - chr1_4:22337582-22337601 Msa0156330:CDS 55.0%
CGTGCCCTACCAAAACATGC+AGG - chr1_4:22337307-22337326 Msa0156330:three_prime_UTR 55.0%
TGCATGAGTCACTGGGGAAC+AGG - chr1_4:22337582-22337601 Msa0156330:CDS 55.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 22337108 22339242 22337108 ID=Msa0156330;Name=Msa0156330
chr1_4 mRNA 22337108 22339242 22337108 ID=Msa0156330-mRNA-1;Parent=Msa0156330;Name=Msa0156330-mRNA-1;_AED=0.26;_eAED=0.26;_QI=88|0.66|0.75|1|0.66|0.5|4|314|280
chr1_4 exon 22337108 22337217 22337108 ID=Msa0156330-mRNA-1:exon:8007;Parent=Msa0156330-mRNA-1
chr1_4 exon 22337248 22338013 22337248 ID=Msa0156330-mRNA-1:exon:8006;Parent=Msa0156330-mRNA-1
chr1_4 exon 22338747 22338894 22338747 ID=Msa0156330-mRNA-1:exon:8005;Parent=Msa0156330-mRNA-1
chr1_4 exon 22339022 22339242 22339022 ID=Msa0156330-mRNA-1:exon:8004;Parent=Msa0156330-mRNA-1
chr1_4 five_prime_UTR 22339155 22339242 22339155 ID=Msa0156330-mRNA-1:five_prime_utr;Parent=Msa0156330-mRNA-1
chr1_4 CDS 22339022 22339154 22339022 ID=Msa0156330-mRNA-1:cds;Parent=Msa0156330-mRNA-1
chr1_4 CDS 22338747 22338894 22338747 ID=Msa0156330-mRNA-1:cds;Parent=Msa0156330-mRNA-1
chr1_4 CDS 22337452 22338013 22337452 ID=Msa0156330-mRNA-1:cds;Parent=Msa0156330-mRNA-1
chr1_4 three_prime_UTR 22337248 22337451 22337248 ID=Msa0156330-mRNA-1:three_prime_utr;Parent=Msa0156330-mRNA-1
chr1_4 three_prime_UTR 22337108 22337217 22337108 ID=Msa0156330-mRNA-1:three_prime_utr;Parent=Msa0156330-mRNA-1
Gene Sequence

>Msa0156330

ATGGTTAGGGCTCCTTGTTGTGAAAAGAAGGGATTGAAGAAAGGTCCTTGGACCTTAGAGGAAGATGAAATCCTCACATCATACATCCATAAACATGGACATAGCAATTGGCGTGCCCTACCAAAACATGCAGGTTTTGTAAATTTTGCAGGTTTATTAAGATGTGGAAAGAGTTGTCGATTGAGATGGATTAACTATTTAAAACCTGATATTAAGAGAGGAAATTTTTCAAATGAAGAAGAGGAAACTATCATCAAGATGCATGAGTCACTGGGGAACAGGTGGTCAGCCATAGCAGCAAAATTGCCTGGAAGAACAGACAATGAAATAAAAAATGTATGGCACACTCACTTGAAGAAAAGACTATTGAATGCCAATAATAACCAACCCAATTCAAATACCAAAAAGAGAGTATCAAAACAAAAAATCAAAAGATCTGATTCCAATTCCAGCACTATAACTCAATCATATGAACCTTCTAATAGTCCTAATAATCATTTCCTTGAAATGGAAACTACATCATCAAATTGCACTTTTTCTAGTGATTTTTCATCACAAGGAAAAAATTTGGACAATAGCATCATTTGTGACCCTGAAGATTCATTTGTGACAATGCTTGAAATTGATGAAAGCTTTTGGTCAGAGACAGTAATTGATGATGAAATTAGTTCCACCGTGCCTTCAAATTCTATGACAGTTTCAAATGATTTACCAGATCAACAATACAATTTTAATAATTCAGTGGAAAATTTCCAAAACCCTTTTGATAATGATGATGGCATGGATTTTTGGTATAACGTGTTTATCACATCAGGAGAATCAACAGAATTGCCTGAGTTTTAG
Protein sequence

>Msa0156330

MVRAPCCEKKGLKKGPWTLEEDEILTSYIHKHGHSNWRALPKHAGFVNFAGLLRCGKSCRLRWINYLKPDIKRGNFSNEEEETIIKMHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLLNANNNQPNSNTKKRVSKQKIKRSDSNSSTITQSYEPSNSPNNHFLEMETTSSNCTFSSDFSSQGKNLDNSIICDPEDSFVTMLEIDESFWSETVIDDEISSTVPSNSMTVSNDLPDQQYNFNNSVENFQNPFDNDDGMDFWYNVFITSGESTELPEF*