AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0015810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0015810 MtrunA17_Chr1g0167691 85.159 283 13 5 1 282 1 255 6.85e-160 444
Msa0015810 MtrunA17_Chr1g0167661 80.142 282 28 5 1 282 1 254 2.20e-158 441
Msa0015810 MtrunA17_Chr1g0187761 62.238 286 76 7 1 282 1 258 2.67e-109 317
Msa0015810 MtrunA17_Chr7g0261281 45.033 302 122 8 1 282 1 278 1.05e-75 232
Msa0015810 MtrunA17_Chr7g0274581 50.952 210 88 5 1 204 1 201 1.16e-63 199
Msa0015810 MtrunA17_Chr1g0203411 53.226 186 65 3 1 170 1 180 9.14e-63 199
Msa0015810 MtrunA17_Chr4g0039971 70.732 123 30 1 1 123 2 118 8.01e-60 194
Msa0015810 MtrunA17_Chr2g0281071 70.968 124 29 2 1 123 1 118 3.65e-59 192
Msa0015810 MtrunA17_Chr2g0323411 70.732 123 30 1 1 123 1 117 6.90e-59 190
Msa0015810 MtrunA17_Chr4g0048511 70.161 124 30 2 1 123 1 118 2.14e-58 190
Msa0015810 MtrunA17_Chr3g0115821 66.935 124 35 1 1 124 1 118 1.24e-57 188
Msa0015810 MtrunA17_Chr2g0323351 62.000 150 42 3 1 150 1 135 3.24e-57 184
Msa0015810 MtrunA17_Chr7g0217741 69.672 122 31 1 1 122 1 116 3.77e-57 185
Msa0015810 MtrunA17_Chr4g0042671 70.492 122 30 1 1 122 1 116 7.47e-57 187
Msa0015810 MtrunA17_Chr6g0453471 68.852 122 32 1 1 122 1 116 2.69e-56 184
Msa0015810 MtrunA17_Chr4g0022891 44.915 236 104 5 1 226 1 220 4.53e-56 181
Msa0015810 MtrunA17_Chr4g0068061 66.393 122 35 1 1 122 1 116 9.99e-56 182
Msa0015810 MtrunA17_Chr8g0349261 66.400 125 34 3 1 123 1 119 1.42e-55 181
Msa0015810 MtrunA17_Chr4g0022931 65.854 123 35 2 1 122 1 117 1.99e-55 180
Msa0015810 MtrunA17_Chr7g0275911 64.516 124 38 1 1 124 1 118 2.15e-55 179
Msa0015810 MtrunA17_Chr4g0022901 40.074 272 129 7 1 270 1 240 2.52e-55 179
Msa0015810 MtrunA17_Chr8g0346561 63.934 122 38 1 1 122 1 116 3.49e-55 180
Msa0015810 MtrunA17_Chr4g0037141 65.323 124 37 1 1 124 1 118 7.43e-55 179
Msa0015810 MtrunA17_Chr3g0121241 50.000 166 77 1 5 170 35 194 1.77e-54 178
Msa0015810 MtrunA17_Chr4g0022911 53.846 156 64 3 1 154 1 150 3.88e-54 177
Msa0015810 MtrunA17_Chr5g0410961 65.854 123 36 1 1 123 1 117 4.10e-54 179
Msa0015810 MtrunA17_Chr4g0070641 47.541 183 79 3 1 183 1 166 6.03e-54 172
Msa0015810 MtrunA17_Chr5g0395281 65.041 123 37 1 1 123 1 117 7.41e-54 177
Msa0015810 MtrunA17_Chr4g0070611 43.038 237 102 7 1 234 1 207 7.45e-54 177
Msa0015810 MtrunA17_Chr2g0311221 66.957 115 32 1 3 117 5 113 6.67e-53 175
Msa0015810 MtrunA17_Chr3g0131121 53.086 162 58 2 1 162 1 144 1.04e-52 174
Msa0015810 MtrunA17_Chr1g0194951 63.115 122 39 1 1 122 1 116 7.00e-52 174
Msa0015810 MtrunA17_Chr3g0092401 61.905 126 42 1 1 126 2 121 1.37e-51 171
Msa0015810 MtrunA17_Chr7g0217221 62.295 122 40 1 1 122 1 116 9.48e-51 168
Msa0015810 MtrunA17_Chr1g0193371 63.934 122 38 1 1 122 1 116 1.12e-50 170
Msa0015810 MtrunA17_Chr8g0385321 62.295 122 40 1 1 122 1 116 2.03e-50 168
Msa0015810 MtrunA17_Chr3g0110351 63.115 122 39 1 1 122 1 116 3.13e-50 167
Msa0015810 MtrunA17_Chr4g0060721 60.656 122 42 1 1 122 2 117 3.34e-50 168
Msa0015810 MtrunA17_Chr7g0269831 68.033 122 33 1 1 122 1 116 3.73e-50 169
Msa0015810 MtrunA17_Chr3g0103281 62.295 122 40 1 1 122 1 116 4.25e-50 167
Msa0015810 MtrunA17_Chr7g0228891 61.475 122 41 1 1 122 1 116 6.89e-50 166
Msa0015810 MtrunA17_Chr6g0453211 63.248 117 37 1 1 117 1 111 8.11e-50 167
Msa0015810 MtrunA17_Chr5g0434571 63.115 122 39 1 1 122 37 152 8.96e-50 167
Msa0015810 MtrunA17_Chr7g0271241 45.972 211 94 6 1 206 1 196 1.87e-49 167
Msa0015810 MtrunA17_Chr4g0057031 60.163 123 43 1 1 123 1 117 2.02e-49 164
Msa0015810 MtrunA17_Chr1g0193801 47.449 196 72 5 1 171 1 190 2.28e-49 167
Msa0015810 MtrunA17_Chr4g0022881 59.167 120 43 1 1 120 1 114 3.70e-49 162
Msa0015810 MtrunA17_Chr7g0270891 51.852 162 68 2 1 158 1 156 7.41e-49 166
Msa0015810 MtrunA17_Chr1g0151941 58.065 124 45 2 1 123 1 118 1.70e-48 161
Msa0015810 MtrunA17_Chr1g0152011 50.314 159 72 2 1 158 1 153 3.25e-48 163
Msa0015810 MtrunA17_Chr7g0254411 62.295 122 40 1 1 122 1 116 4.68e-48 163
Msa0015810 MtrunA17_Chr5g0400821 54.730 148 55 4 1 145 1 139 6.00e-48 162
Msa0015810 MtrunA17_Chr5g0435101 54.918 122 49 1 2 123 1 116 3.10e-47 157
Msa0015810 MtrunA17_Chr4g0058631 60.163 123 43 1 1 123 1 117 6.08e-47 160
Msa0015810 MtrunA17_Chr2g0309911 57.627 118 44 1 6 123 5 116 3.41e-46 157
Msa0015810 MtrunA17_Chr4g0028311 58.065 124 45 2 1 123 1 118 1.27e-45 156
Msa0015810 MtrunA17_Chr3g0117091 59.350 123 44 1 1 123 1 117 1.28e-45 157
Msa0015810 MtrunA17_Chr4g0044421 58.537 123 44 2 2 123 1 117 1.55e-45 152
Msa0015810 MtrunA17_Chr7g0264641 50.000 152 66 3 1 148 1 146 2.06e-45 154
Msa0015810 MtrunA17_Chr3g0135311 50.714 140 62 2 1 139 1 134 2.17e-45 156
Msa0015810 MtrunA17_Chr1g0211161 57.851 121 45 1 3 123 4 118 5.94e-45 151
Msa0015810 MtrunA17_Chr5g0417821 62.832 113 36 1 11 123 6 112 6.23e-45 153
Msa0015810 MtrunA17_Chr2g0330041 56.098 123 48 1 1 123 1 117 1.81e-44 155
Msa0015810 MtrunA17_Chr8g0342541 54.472 123 50 1 1 123 1 117 4.05e-44 153
Msa0015810 MtrunA17_Chr6g0452271 54.472 123 50 1 1 123 1 117 4.86e-44 152
Msa0015810 MtrunA17_Chr8g0342521 54.472 123 50 1 1 123 1 117 1.56e-43 151
Msa0015810 MtrunA17_Chr2g0327351 58.974 117 41 2 1 116 1 111 1.64e-43 150
Msa0015810 MtrunA17_Chr4g0032401 47.568 185 78 5 12 187 17 191 2.55e-43 150
Msa0015810 MtrunA17_Chr4g0054391 52.941 153 62 4 1 150 1 146 5.64e-43 148
Msa0015810 MtrunA17_Chr8g0387421 53.279 122 51 1 1 122 1 116 4.90e-42 147
Msa0015810 MtrunA17_Chr7g0220341 45.238 168 81 3 11 176 24 182 5.26e-42 145
Msa0015810 MtrunA17_Chr1g0203441 60.909 110 37 1 13 122 14 117 1.64e-41 144
Msa0015810 MtrunA17_Chr4g0072751 58.120 117 42 2 1 116 1 111 1.91e-41 146
Msa0015810 MtrunA17_Chr2g0328771 60.177 113 39 1 12 124 20 126 2.11e-41 145
Msa0015810 MtrunA17_Chr6g0487491 46.626 163 68 4 1 154 1 153 4.54e-41 142
Msa0015810 MtrunA17_Chr1g0209661 57.018 114 43 1 8 121 23 130 4.61e-41 144
Msa0015810 MtrunA17_Chr8g0343831 55.738 122 44 2 1 122 1 112 5.44e-41 142
Msa0015810 MtrunA17_Chr6g0470971 55.932 118 46 1 4 121 6 117 5.83e-41 143
Msa0015810 MtrunA17_Chr7g0228231 55.085 118 47 1 12 129 14 125 7.50e-41 140
Msa0015810 MtrunA17_Chr8g0342481 51.562 128 55 2 1 127 1 122 7.84e-41 145
Msa0015810 MtrunA17_Chr4g0055981 50.376 133 59 2 9 141 52 177 1.03e-40 140
Msa0015810 MtrunA17_Chr3g0099131 46.405 153 70 2 12 158 41 187 2.40e-40 146
Msa0015810 MtrunA17_Chr5g0434911 50.847 118 52 1 7 124 16 127 2.66e-40 141
Msa0015810 MtrunA17_Chr5g0397231 56.140 114 44 1 1 114 1 108 2.75e-40 142
Msa0015810 MtrunA17_Chr3g0080861 57.273 110 41 1 12 121 37 140 5.80e-40 145
Msa0015810 MtrunA17_Chr3g0088461 60.526 114 39 1 9 122 19 126 6.54e-40 142
Msa0015810 MtrunA17_Chr8g0354661 57.273 110 41 1 12 121 37 140 7.21e-40 145
Msa0015810 MtrunA17_Chr7g0240821 41.379 174 90 3 16 189 5 166 7.67e-40 138
Msa0015810 MtrunA17_Chr5g0434931 51.304 115 50 1 10 124 33 141 1.32e-39 139
Msa0015810 MtrunA17_Chr6g0450101 49.624 133 59 2 1 131 1 127 1.90e-39 137
Msa0015810 MtrunA17_Chr2g0322521 58.407 113 41 1 9 121 26 132 3.13e-39 141
Msa0015810 MtrunA17_Chr1g0186061 49.612 129 57 2 13 141 21 141 3.49e-39 137
Msa0015810 MtrunA17_Chr2g0294811 64.286 98 29 1 1 98 1 92 5.54e-39 132
Msa0015810 MtrunA17_Chr4g0042611 63.830 94 28 1 1 94 1 88 1.13e-38 130
Msa0015810 MtrunA17_Chr5g0434831 53.509 114 47 1 10 123 5 112 1.18e-38 134
Msa0015810 MtrunA17_Chr1g0154031 55.455 110 43 1 12 121 76 179 1.74e-38 139
Msa0015810 MtrunA17_Chr1g0194291 55.856 111 43 1 11 121 20 124 1.98e-38 135
Msa0015810 MtrunA17_Chr1g0168661 46.377 138 66 2 6 143 15 144 2.05e-38 135
Msa0015810 MtrunA17_Chr7g0228991 50.877 114 50 1 10 123 27 134 2.50e-37 133
Msa0015810 MtrunA17_Chr1g0180391 54.054 111 45 1 12 122 19 123 3.12e-37 132
Msa0015810 MtrunA17_Chr2g0323321 60.204 98 32 2 1 98 1 91 3.28e-37 128
Msa0015810 MtrunA17_Chr1g0194301 41.860 172 87 4 12 176 33 198 3.77e-37 133
Msa0015810 MtrunA17_Chr8g0360111 53.704 108 44 1 11 118 24 125 8.66e-37 131
Msa0015810 MtrunA17_Chr5g0434841 50.000 116 52 1 8 123 16 125 1.22e-36 132
Msa0015810 MtrunA17_Chr7g0247131 74.324 74 19 0 49 122 9 82 2.45e-36 130
Msa0015810 MtrunA17_Chr4g0030881 51.818 110 52 1 13 121 8 117 2.64e-35 127
Msa0015810 MtrunA17_Chr4g0068921 55.046 109 43 1 12 120 24 126 8.47e-35 124
Msa0015810 MtrunA17_Chr2g0293911 54.128 109 44 1 12 120 24 126 1.54e-33 124
Msa0015810 MtrunA17_Chr1g0192411 50.000 110 49 1 12 121 12 115 1.83e-33 126
Msa0015810 MtrunA17_Chr2g0327821 50.000 110 49 1 12 121 6 109 4.55e-33 121
Msa0015810 MtrunA17_Chr5g0440781 50.459 109 47 2 13 120 13 115 5.07e-33 119
Msa0015810 MtrunA17_Chr5g0440761 50.459 109 47 2 13 120 13 115 2.25e-32 120
Msa0015810 MtrunA17_Chr5g0441141 50.459 109 47 2 13 120 13 115 2.76e-32 120
Msa0015810 MtrunA17_Chr5g0395221 59.574 94 32 1 1 94 1 88 4.91e-32 114
Msa0015810 MtrunA17_Chr5g0441131 47.706 109 50 2 13 120 10 112 1.04e-30 113
Msa0015810 MtrunA17_Chr8g0342531 52.632 95 39 1 1 95 1 89 5.07e-30 111
Msa0015810 MtrunA17_Chr3g0133601 50.000 108 47 2 14 121 37 137 8.02e-30 112
Msa0015810 MtrunA17_Chr8g0342511 52.688 93 38 1 1 93 1 87 1.08e-29 108
Msa0015810 MtrunA17_Chr4g0013361 46.087 115 53 3 8 120 6 113 1.71e-29 113
Msa0015810 MtrunA17_Chr3g0099141 53.933 89 35 1 12 100 40 122 2.09e-29 108
Msa0015810 MtrunA17_Chr8g0334881 45.000 120 55 4 8 123 6 118 3.84e-29 112
Msa0015810 MtrunA17_Chr8g0342461 52.083 96 39 2 1 95 1 90 4.74e-28 105
Msa0015810 MtrunA17_Chr6g0454921 49.074 108 48 2 14 121 15 115 5.08e-28 107
Msa0015810 MtrunA17_Chr4g0008551 48.148 108 49 2 14 121 38 138 6.20e-28 110
Msa0015810 MtrunA17_Chr5g0401731 48.148 108 49 2 14 121 15 115 1.42e-27 108
Msa0015810 MtrunA17_Chr8g0342471 52.083 96 39 2 1 95 1 90 1.75e-27 103
Msa0015810 MtrunA17_Chr4g0053431 46.429 112 45 2 14 121 5 105 8.67e-27 105
Msa0015810 MtrunA17_Chr7g0229101 60.563 71 28 0 49 119 3 73 3.70e-26 102
Msa0015810 MtrunA17_Chr3g0117511 38.217 157 71 4 3 157 170 302 6.69e-26 105
Msa0015810 MtrunA17_Chr7g0229131 48.936 94 43 1 47 135 1 94 8.04e-26 100
Msa0015810 MtrunA17_Chr5g0434901 62.121 66 25 0 54 119 9 74 9.46e-26 98.6
Msa0015810 MtrunA17_Chr5g0429661 32.727 220 104 8 12 221 120 305 1.80e-25 103
Msa0015810 MtrunA17_Chr3g0139671 44.144 111 55 2 12 122 83 186 1.30e-24 103
Msa0015810 MtrunA17_Chr3g0139671 35.849 106 60 3 14 118 33 131 2.50e-13 70.1
Msa0015810 MtrunA17_Chr7g0238631 41.060 151 78 4 12 158 111 254 1.35e-24 103
Msa0015810 MtrunA17_Chr7g0238631 35.849 106 60 4 14 118 61 159 8.47e-12 65.1
Msa0015810 MtrunA17_Chr5g0425591 50.000 88 37 2 13 99 10 91 1.45e-24 94.7
Msa0015810 MtrunA17_Chr1g0157731 42.342 111 57 2 12 122 89 192 3.58e-24 102
Msa0015810 MtrunA17_Chr1g0157731 33.962 106 62 3 14 118 39 137 2.17e-12 67.4
Msa0015810 MtrunA17_Chr6g0480581 45.794 107 51 2 14 120 4 103 4.60e-24 97.4
Msa0015810 MtrunA17_Chr4g0058991 34.615 156 77 4 3 157 197 328 2.16e-23 99.0
Msa0015810 MtrunA17_Chr4g0042501 36.301 146 80 4 10 154 101 234 5.92e-23 97.4
Msa0015810 MtrunA17_Chr1g0177901 35.789 190 104 6 24 206 4 182 1.30e-22 92.8
Msa0015810 MtrunA17_Chr6g0453751 46.465 99 38 3 10 99 18 110 2.09e-22 90.1
Msa0015810 MtrunA17_Chr5g0417621 36.232 138 77 3 14 151 134 260 7.18e-22 94.7
Msa0015810 MtrunA17_Chr7g0228531 39.370 127 68 3 14 140 220 337 2.86e-21 92.8
Msa0015810 MtrunA17_Chr3g0093811 51.351 74 36 0 49 122 13 86 1.02e-20 89.0
Msa0015810 MtrunA17_Chr6g0460661 42.857 105 49 2 14 116 16 111 2.92e-20 85.5
Msa0015810 MtrunA17_Chr5g0437321 41.905 105 54 2 14 118 19 116 1.28e-19 86.3
Msa0015810 MtrunA17_Chr7g0254261 42.593 108 55 2 14 121 89 189 1.30e-19 87.4
Msa0015810 MtrunA17_Chr3g0125801 40.351 114 61 2 8 121 10 116 1.69e-19 86.3
Msa0015810 MtrunA17_Chr6g0460671 35.762 151 84 3 14 162 99 238 2.85e-19 86.3
Msa0015810 MtrunA17_Chr7g0228401 40.708 113 57 3 25 137 290 392 3.31e-19 87.0
Msa0015810 MtrunA17_Chr5g0397841 43.689 103 51 2 12 114 108 203 2.00e-18 84.7
Msa0015810 MtrunA17_Chr7g0228481 34.483 145 68 4 14 157 220 338 3.23e-18 84.0
Msa0015810 MtrunA17_Chr5g0416341 33.333 159 93 4 17 169 29 180 7.53e-18 83.2
Msa0015810 MtrunA17_Chr7g0233061 34.351 131 77 3 14 144 180 301 1.74e-17 81.3
Msa0015810 MtrunA17_Chr7g0247141 67.347 49 15 1 1 48 1 49 2.42e-17 74.7
Msa0015810 MtrunA17_Chr7g0238651 34.821 112 69 1 17 128 10 117 2.61e-17 80.9
Msa0015810 MtrunA17_Chr8g0362231 33.566 143 79 4 17 159 25 151 6.55e-16 77.4
Msa0015810 MtrunA17_Chr5g0434871 57.778 45 19 0 80 124 2 46 1.05e-14 67.8
Msa0015810 MtrunA17_Chr1g0193901 50.000 66 26 2 10 74 9 68 1.37e-14 68.6
Msa0015810 MtrunA17_Chr1g0193891 50.000 66 26 2 10 74 9 68 1.37e-14 68.6
Msa0015810 MtrunA17_Chr1g0193871 50.000 66 26 2 10 74 9 68 1.37e-14 68.6
Msa0015810 MtrunA17_Chr1g0193881 50.000 66 26 2 10 74 9 68 1.37e-14 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0015810 AT3G23250.1 48.136 295 123 7 1 279 1 281 1.05e-80 245
Msa0015810 AT2G31180.1 46.154 286 113 7 1 282 1 249 3.14e-70 217
Msa0015810 AT1G06180.1 46.735 291 101 10 1 282 1 246 2.48e-69 215
Msa0015810 AT1G16490.1 47.257 237 108 5 3 238 5 225 5.78e-63 199
Msa0015810 AT4G21440.1 71.545 123 29 1 1 123 1 117 1.63e-61 198
Msa0015810 AT3G61250.1 68.548 124 33 1 1 124 1 118 4.98e-60 193
Msa0015810 AT4G05100.1 71.774 124 28 2 1 123 1 118 1.51e-59 192
Msa0015810 AT1G79180.1 55.114 176 65 4 3 176 5 168 1.72e-59 191
Msa0015810 AT4G28110.1 67.200 125 35 1 1 125 1 119 2.81e-58 188
Msa0015810 AT5G16770.4 68.293 123 33 1 1 123 1 117 3.52e-58 189
Msa0015810 AT5G16770.3 68.293 123 33 1 1 123 1 117 3.52e-58 189
Msa0015810 AT5G16770.1 68.293 123 33 1 1 123 1 117 8.38e-58 188
Msa0015810 AT5G16770.2 68.293 123 33 1 1 123 1 117 8.38e-58 188
Msa0015810 AT1G56160.1 68.333 120 32 1 3 122 5 118 1.94e-57 186
Msa0015810 AT3G02940.2 66.667 123 35 1 1 123 1 117 3.87e-57 186
Msa0015810 AT1G79180.2 49.261 203 68 5 3 176 5 201 3.96e-57 186
Msa0015810 AT3G02940.1 66.667 123 35 1 1 123 1 117 8.76e-57 185
Msa0015810 AT3G02940.3 66.667 123 35 1 1 123 1 117 8.76e-57 185
Msa0015810 AT3G01140.2 67.480 123 34 1 1 123 1 117 2.63e-56 185
Msa0015810 AT1G35515.1 45.455 209 87 5 1 203 1 188 7.77e-56 179
Msa0015810 AT5G15310.1 67.480 123 34 1 1 123 1 117 9.37e-56 182
Msa0015810 AT1G34670.1 67.480 123 34 1 1 123 1 117 9.72e-56 184
Msa0015810 AT5G15310.2 67.480 123 34 1 1 123 1 117 1.29e-55 182
Msa0015810 AT5G15310.4 67.480 123 34 1 1 123 1 117 1.53e-55 179
Msa0015810 AT2G16720.1 65.323 124 37 1 1 124 1 118 2.03e-55 180
Msa0015810 AT3G12820.1 45.495 222 109 4 3 218 5 220 2.05e-55 179
Msa0015810 AT3G01140.1 66.667 123 35 1 1 123 44 160 2.80e-55 183
Msa0015810 AT5G10280.1 65.854 123 36 1 1 123 1 117 3.54e-55 181
Msa0015810 AT4G38620.1 64.516 124 38 1 1 124 1 118 1.62e-54 178
Msa0015810 AT5G65230.1 66.667 123 35 1 1 123 1 117 2.73e-54 178
Msa0015810 AT1G22640.1 60.902 133 45 2 1 133 1 126 3.39e-54 176
Msa0015810 AT3G13540.1 62.500 120 39 1 4 123 15 128 7.64e-54 175
Msa0015810 AT5G49330.1 65.574 122 36 1 1 122 1 116 8.39e-54 178
Msa0015810 AT4G09460.1 62.903 124 40 1 1 124 1 118 9.14e-54 175
Msa0015810 AT4G17785.2 63.710 124 38 2 1 123 1 118 9.92e-54 178
Msa0015810 AT4G17785.1 63.710 124 38 2 1 123 1 118 1.13e-53 178
Msa0015810 AT4G22680.1 42.982 228 112 5 1 224 1 214 1.54e-52 172
Msa0015810 AT5G16600.1 64.754 122 37 1 1 122 1 116 1.68e-52 174
Msa0015810 AT4G12350.1 43.363 226 105 5 1 215 1 214 2.44e-52 172
Msa0015810 AT2G47460.1 62.903 124 40 1 1 124 1 118 5.21e-52 174
Msa0015810 AT5G62470.1 62.698 126 40 1 1 126 1 119 6.06e-52 174
Msa0015810 AT5G60890.1 63.115 122 39 1 1 122 1 116 6.76e-52 172
Msa0015810 AT5G61420.2 64.228 123 38 1 1 123 1 117 9.74e-52 173
Msa0015810 AT5G62470.2 62.698 126 41 1 1 126 1 120 1.05e-51 173
Msa0015810 AT3G28910.1 60.938 128 44 1 1 128 1 122 1.67e-51 172
Msa0015810 AT5G07690.1 63.710 124 39 1 1 124 1 118 2.14e-51 172
Msa0015810 AT1G18570.1 63.710 124 38 2 1 123 1 118 2.99e-51 172
Msa0015810 AT4G34990.1 63.415 123 39 1 1 123 1 117 3.09e-51 169
Msa0015810 AT1G57560.1 53.947 152 63 2 1 152 1 145 3.98e-51 170
Msa0015810 AT3G62610.1 63.115 122 39 1 1 122 1 116 5.44e-51 171
Msa0015810 AT1G74080.1 61.789 123 41 1 1 123 1 117 1.75e-50 169
Msa0015810 AT3G47600.1 60.630 127 44 1 1 127 1 121 2.39e-50 169
Msa0015810 AT1G57560.2 60.976 123 42 1 1 123 1 117 4.66e-50 166
Msa0015810 AT1G74650.1 62.602 123 40 1 1 123 1 117 7.18e-50 167
Msa0015810 AT1G66230.1 62.295 122 40 1 1 122 1 116 9.06e-50 166
Msa0015810 AT5G07700.1 62.097 124 41 1 1 124 1 118 2.08e-49 167
Msa0015810 AT5G07700.2 62.097 124 41 1 1 124 1 118 2.08e-49 167
Msa0015810 AT4G01680.2 60.938 128 44 1 1 122 1 128 4.03e-49 166
Msa0015810 AT5G54230.1 68.750 112 29 1 12 123 12 117 4.14e-49 165
Msa0015810 AT1G08810.1 61.475 122 41 1 1 122 1 116 7.18e-49 164
Msa0015810 AT5G26660.1 61.475 122 41 1 1 122 1 116 7.49e-49 166
Msa0015810 AT4G01680.3 62.295 122 40 1 1 122 1 116 8.35e-49 162
Msa0015810 AT5G14340.1 43.902 205 102 4 1 201 13 208 2.32e-48 162
Msa0015810 AT5G56110.1 62.295 122 40 1 1 122 1 116 2.45e-48 163
Msa0015810 AT4G01680.1 62.295 122 40 1 1 122 1 116 2.51e-48 164
Msa0015810 AT1G09540.1 59.836 122 43 1 1 122 1 116 1.44e-47 162
Msa0015810 AT4G37780.1 56.452 124 47 2 1 123 1 118 1.34e-46 158
Msa0015810 AT5G62320.1 50.000 148 58 3 3 143 4 142 3.38e-46 155
Msa0015810 AT3G13890.1 56.349 126 52 2 1 123 1 126 4.12e-46 159
Msa0015810 AT5G57620.1 59.677 124 43 2 1 123 1 118 4.37e-46 158
Msa0015810 AT3G13890.2 56.911 123 47 1 1 123 1 117 5.70e-46 158
Msa0015810 AT5G23000.1 41.905 210 106 5 1 205 1 199 1.15e-45 157
Msa0015810 AT3G49690.1 59.200 125 44 2 1 124 1 119 2.09e-45 155
Msa0015810 AT3G12720.1 57.143 119 45 1 6 124 16 128 2.59e-45 155
Msa0015810 AT5G65790.1 58.400 125 45 2 1 124 1 119 1.09e-44 155
Msa0015810 AT5G35550.1 60.504 119 41 1 12 130 14 126 8.47e-44 150
Msa0015810 AT1G18710.1 58.197 122 45 1 1 122 1 116 8.87e-44 150
Msa0015810 AT1G74430.1 53.623 138 54 2 1 134 1 132 2.47e-43 149
Msa0015810 AT2G32460.1 57.895 114 42 1 8 121 14 121 3.57e-43 154
Msa0015810 AT2G36890.1 56.349 126 48 2 1 125 1 120 5.34e-43 149
Msa0015810 AT5G14750.1 57.273 110 41 1 13 122 17 120 6.94e-43 145
Msa0015810 AT2G36890.2 56.349 126 48 2 1 125 42 161 9.55e-43 149
Msa0015810 AT2G32460.2 58.036 112 41 1 10 121 4 109 1.41e-42 152
Msa0015810 AT5G40330.1 56.364 110 42 1 13 122 13 116 2.82e-42 145
Msa0015810 AT5G06100.1 57.658 111 41 1 11 121 31 135 3.06e-42 150
Msa0015810 AT3G28470.1 56.897 116 44 1 1 116 1 110 3.48e-42 147
Msa0015810 AT1G63910.1 54.918 122 49 1 1 122 1 116 4.06e-42 148
Msa0015810 AT5G06100.5 57.658 111 41 1 11 121 31 135 9.89e-42 150
Msa0015810 AT5G06100.2 57.658 111 41 1 11 121 31 135 9.89e-42 150
Msa0015810 AT5G06100.3 57.658 111 41 1 11 121 31 135 9.89e-42 150
Msa0015810 AT5G06100.4 57.658 111 41 1 11 121 31 135 9.89e-42 150
Msa0015810 AT3G23250.2 42.060 233 109 8 64 279 1 224 1.66e-41 143
Msa0015810 AT3G27920.1 53.448 116 48 1 8 123 10 119 1.34e-40 140
Msa0015810 AT3G11440.2 54.622 119 44 2 7 121 32 144 1.34e-40 146
Msa0015810 AT5G40350.1 55.263 114 45 1 12 125 17 124 1.39e-40 140
Msa0015810 AT5G55020.1 56.757 111 42 1 12 122 26 130 2.90e-40 146
Msa0015810 AT5G12870.1 56.198 121 47 1 2 122 8 122 3.11e-40 141
Msa0015810 AT4G13480.1 52.308 130 54 2 13 142 7 128 3.14e-40 140
Msa0015810 AT3G11440.3 54.622 119 44 2 7 121 32 144 3.70e-40 147
Msa0015810 AT3G11440.4 54.622 119 44 2 7 121 32 144 3.70e-40 147
Msa0015810 AT3G11440.1 54.622 119 44 2 7 121 32 144 3.70e-40 147
Msa0015810 AT3G24310.1 50.758 132 57 2 9 140 15 138 4.97e-40 140
Msa0015810 AT3G01530.1 51.613 124 54 1 8 131 21 138 9.18e-40 138
Msa0015810 AT5G52600.1 50.000 144 60 2 9 146 9 146 9.57e-40 137
Msa0015810 AT1G68320.1 41.063 207 110 5 12 212 19 219 1.50e-39 139
Msa0015810 AT4G25560.1 58.974 117 42 1 13 129 11 121 1.60e-39 139
Msa0015810 AT3G27810.1 55.856 111 43 1 12 122 20 124 1.74e-39 137
Msa0015810 AT3G08500.1 57.895 114 42 1 9 122 27 134 4.24e-39 140
Msa0015810 AT3G30210.1 50.769 130 51 2 11 140 26 142 9.29e-39 137
Msa0015810 AT2G26960.1 54.464 112 45 1 9 120 17 122 1.03e-38 140
Msa0015810 AT5G52260.1 56.000 125 49 1 1 125 1 119 1.05e-38 137
Msa0015810 AT4G26930.1 54.128 109 44 1 12 120 19 121 2.32e-38 139
Msa0015810 AT1G25340.1 55.085 118 45 2 13 128 19 130 3.36e-38 136
Msa0015810 AT1G48000.1 45.513 156 73 4 12 161 32 181 1.41e-37 133
Msa0015810 AT2G47190.1 40.828 169 81 3 8 163 16 178 1.57e-37 134
Msa0015810 AT1G66370.1 33.632 223 124 5 10 223 6 213 3.01e-37 132
Msa0015810 AT1G25340.2 52.542 118 43 2 13 128 19 125 1.88e-35 129
Msa0015810 AT1G66380.1 55.357 112 44 1 10 121 6 111 2.14e-35 124
Msa0015810 AT1G25340.3 52.542 118 43 2 13 128 19 125 2.92e-35 129
Msa0015810 AT1G56650.1 55.357 112 44 1 10 121 6 111 7.20e-35 126
Msa0015810 AT3G12820.2 42.442 172 93 3 53 218 1 172 1.28e-34 124
Msa0015810 AT1G66390.1 55.357 112 44 1 10 121 6 111 1.49e-34 125
Msa0015810 AT3G46130.1 49.123 114 52 1 8 121 5 112 1.85e-34 125
Msa0015810 AT3G48920.1 51.786 112 48 1 9 120 15 120 1.92e-34 125
Msa0015810 AT5G59780.3 50.459 109 48 1 13 121 9 111 5.54e-34 124
Msa0015810 AT5G35550.2 64.706 85 30 0 46 130 45 129 2.21e-33 123
Msa0015810 AT3G53200.1 52.727 110 46 1 12 121 9 112 6.13e-33 121
Msa0015810 AT3G06490.1 55.046 109 43 1 12 120 19 121 1.31e-32 122
Msa0015810 AT5G26660.2 72.222 72 20 0 51 122 14 85 1.34e-32 122
Msa0015810 AT5G14750.3 58.824 85 34 1 38 122 3 86 1.72e-32 118
Msa0015810 AT5G49620.1 52.212 113 48 1 8 120 22 128 3.02e-32 121
Msa0015810 AT3G60460.1 44.355 124 59 4 7 128 6 121 8.76e-30 114
Msa0015810 AT5G49620.2 46.457 127 48 2 8 120 22 142 1.27e-28 112
Msa0015810 AT5G40350.2 61.644 73 28 0 51 123 5 77 1.34e-28 107
Msa0015810 AT3G47600.2 63.636 77 28 0 51 127 39 115 1.53e-28 111
Msa0015810 AT3G27810.2 59.459 74 30 0 49 122 2 75 2.54e-28 107
Msa0015810 AT2G26950.1 46.226 106 51 1 9 114 13 112 2.14e-27 109
Msa0015810 AT3G46130.3 61.111 72 28 0 50 121 9 80 3.89e-27 105
Msa0015810 AT4G37260.1 48.148 108 49 2 14 121 13 113 4.64e-27 107
Msa0015810 AT5G59780.2 61.972 71 27 0 51 121 20 90 5.50e-27 105
Msa0015810 AT3G46130.4 61.972 71 27 0 51 121 20 90 8.40e-27 105
Msa0015810 AT2G23290.1 48.148 108 49 2 14 121 13 113 9.12e-27 106
Msa0015810 AT3G53200.2 61.538 78 28 1 46 121 2 79 1.27e-26 103
Msa0015810 AT5G67300.1 38.158 152 85 3 14 165 6 148 3.21e-26 105
Msa0015810 AT1G66380.3 60.526 76 30 0 46 121 3 78 3.26e-26 99.8
Msa0015810 AT3G55730.1 46.087 115 55 2 14 128 56 163 1.03e-25 105
Msa0015810 AT3G50060.1 47.222 108 50 2 14 121 6 106 1.04e-25 103
Msa0015810 AT3G09230.1 43.243 111 56 1 14 124 55 158 1.34e-25 104
Msa0015810 AT3G09370.2 42.143 140 71 3 12 148 133 265 3.33e-25 104
Msa0015810 AT3G09370.2 35.849 106 60 3 14 118 83 181 3.81e-13 69.7
Msa0015810 AT3G09370.1 42.143 140 71 3 12 148 128 260 3.34e-25 104
Msa0015810 AT3G09370.1 35.849 106 60 3 14 118 78 176 4.27e-13 69.3
Msa0015810 AT3G09370.3 40.690 145 76 3 12 153 141 278 3.63e-25 104
Msa0015810 AT3G09370.3 35.849 106 60 3 14 118 91 189 3.99e-13 69.7
Msa0015810 AT5G40360.1 30.918 207 110 5 1 206 145 319 4.18e-25 103
Msa0015810 AT2G39880.1 47.321 112 44 2 14 121 50 150 4.73e-25 103
Msa0015810 AT1G22640.3 50.538 93 42 2 64 156 1 89 9.34e-25 98.6
Msa0015810 AT5G02320.1 39.103 156 81 5 12 162 125 271 1.83e-24 102
Msa0015810 AT5G02320.1 33.962 106 62 3 14 118 75 173 2.68e-12 67.0
Msa0015810 AT5G02320.2 39.103 156 81 5 12 162 125 271 1.83e-24 102
Msa0015810 AT5G02320.2 33.962 106 62 3 14 118 75 173 2.68e-12 67.0
Msa0015810 AT3G27785.1 45.794 107 51 2 8 114 183 282 2.02e-24 102
Msa0015810 AT5G02320.3 39.103 156 81 5 12 162 65 211 2.46e-24 102
Msa0015810 AT5G02320.3 33.962 106 62 3 14 118 15 113 3.88e-12 66.6
Msa0015810 AT5G11510.3 44.144 111 55 2 12 122 79 182 5.09e-24 102
Msa0015810 AT5G11510.3 34.906 106 61 3 14 118 29 127 6.94e-14 72.0
Msa0015810 AT5G11510.1 44.144 111 55 2 12 122 79 182 5.09e-24 102
Msa0015810 AT5G11510.1 34.906 106 61 3 14 118 29 127 6.94e-14 72.0
Msa0015810 AT5G11510.4 44.144 111 55 2 12 122 79 182 5.09e-24 102
Msa0015810 AT5G11510.4 34.906 106 61 3 14 118 29 127 6.94e-14 72.0
Msa0015810 AT5G11510.2 44.144 111 55 2 12 122 79 182 6.63e-24 101
Msa0015810 AT5G11510.2 34.906 106 61 3 14 118 29 127 8.54e-14 72.0
Msa0015810 AT5G11510.5 44.144 111 55 2 12 122 79 182 7.41e-24 101
Msa0015810 AT5G11510.5 34.906 106 61 3 14 118 29 127 8.86e-14 71.6
Msa0015810 AT4G18770.1 41.026 117 58 2 8 122 211 318 7.41e-24 100
Msa0015810 AT1G17950.1 45.370 108 52 2 14 121 5 105 2.40e-23 96.3
Msa0015810 AT4G33450.1 39.496 119 60 2 3 121 13 119 6.99e-23 95.1
Msa0015810 AT5G58850.1 43.810 105 52 2 10 114 101 198 1.74e-22 96.7
Msa0015810 AT4G32730.5 41.441 111 58 2 12 122 85 188 1.76e-22 97.4
Msa0015810 AT4G32730.5 35.849 106 60 3 14 118 35 133 1.49e-13 71.2
Msa0015810 AT4G32730.4 41.441 111 58 2 12 122 85 188 1.76e-22 97.4
Msa0015810 AT4G32730.4 35.849 106 60 3 14 118 35 133 1.49e-13 71.2
Msa0015810 AT4G32730.3 41.441 111 58 2 12 122 85 188 1.76e-22 97.4
Msa0015810 AT4G32730.3 35.849 106 60 3 14 118 35 133 1.49e-13 71.2
Msa0015810 AT4G32730.2 41.441 111 58 2 12 122 85 188 1.76e-22 97.4
Msa0015810 AT4G32730.2 35.849 106 60 3 14 118 35 133 1.49e-13 71.2
Msa0015810 AT4G32730.1 41.441 111 58 2 12 122 85 188 1.85e-22 97.4
Msa0015810 AT4G32730.1 35.849 106 60 3 14 118 35 133 1.60e-13 70.9
Msa0015810 AT5G14750.4 61.017 59 23 0 64 122 1 59 2.92e-22 90.5
Msa0015810 AT5G14750.2 61.017 59 23 0 64 122 1 59 2.92e-22 90.5
Msa0015810 AT1G66380.2 50.562 89 38 1 10 98 6 88 8.41e-22 88.2
Msa0015810 AT1G69560.1 39.474 114 62 2 9 122 102 208 9.63e-22 93.2
Msa0015810 AT1G69560.2 39.474 114 62 2 9 122 118 224 1.08e-21 93.6
Msa0015810 AT3G29020.1 39.450 109 59 2 14 122 65 166 1.13e-21 91.3
Msa0015810 AT1G71030.2 55.224 67 30 0 57 123 5 71 1.45e-21 89.7
Msa0015810 AT1G71030.1 55.224 67 30 0 57 123 19 85 1.80e-21 89.7
Msa0015810 AT3G29020.2 39.450 109 59 2 14 122 67 168 2.30e-21 92.0
Msa0015810 AT1G73410.1 44.643 112 55 2 14 125 6 110 2.84e-21 90.5
Msa0015810 AT5G11050.1 29.688 256 143 9 10 249 101 335 5.46e-21 92.4
Msa0015810 AT1G26780.1 40.909 110 58 2 12 121 96 198 8.20e-21 90.1
Msa0015810 AT1G73410.2 44.248 113 56 2 14 126 6 111 8.23e-21 88.2
Msa0015810 AT1G26780.2 40.909 110 58 2 12 121 96 198 9.00e-21 90.9
Msa0015810 AT1G18960.1 42.623 122 57 5 1 122 1 109 1.23e-20 90.1
Msa0015810 AT5G17800.1 39.815 108 58 1 14 121 93 193 1.29e-20 90.1
Msa0015810 AT5G39700.1 39.450 109 59 1 8 116 50 151 7.53e-18 80.1
Msa0015810 AT4G00540.2 39.474 114 59 3 12 122 101 207 8.62e-18 83.2
Msa0015810 AT4G00540.2 31.193 109 69 2 14 118 46 152 1.13e-11 65.1
Msa0015810 AT2G25230.1 39.316 117 63 3 8 124 20 128 9.47e-18 80.5
Msa0015810 AT4G00540.1 39.474 114 59 3 12 122 99 205 1.55e-17 82.4
Msa0015810 AT4G00540.1 31.193 109 69 2 14 118 44 150 1.91e-11 64.3
Msa0015810 AT1G14350.2 37.903 124 69 3 17 139 28 144 2.81e-17 81.6
Msa0015810 AT1G14350.1 37.903 124 69 3 17 139 28 144 2.81e-17 81.6
Msa0015810 AT2G37630.1 37.143 105 62 1 17 121 7 107 3.70e-17 80.9
Msa0015810 AT4G25560.2 66.038 53 18 0 77 129 3 55 2.91e-16 76.3
Msa0015810 AT2G02820.3 39.048 105 57 2 17 121 33 130 9.24e-16 76.6
Msa0015810 AT2G02820.2 39.048 105 57 2 17 121 33 130 1.07e-15 77.0
Msa0015810 AT2G02820.1 39.048 105 57 2 17 121 33 130 1.17e-15 77.0
Msa0015810 AT5G40430.1 34.746 118 68 4 7 124 47 155 2.53e-14 71.6
Msa0015810 AT1G16490.2 35.669 157 88 5 83 238 12 156 5.12e-14 69.7
Msa0015810 AT5G59780.1 60.465 43 17 0 79 121 4 46 1.05e-12 65.5
Msa0015810 AT3G46130.2 60.465 43 17 0 79 121 4 46 1.69e-12 65.1
Msa0015810 AT3G18100.1 35.294 102 59 2 13 114 545 639 2.79e-11 64.3
Msa0015810 AT3G18100.3 35.294 102 59 2 13 114 497 591 2.98e-11 64.3
Msa0015810 AT3G18100.4 35.294 102 59 2 13 114 384 478 3.17e-11 63.9
Msa0015810 AT3G18100.2 35.294 102 59 2 13 114 332 426 3.47e-11 63.9
Msa0015810 AT1G14350.3 40.964 83 48 1 62 143 23 105 5.15e-11 63.2
Msa0015810 AT1G14350.4 40.964 83 48 1 62 143 23 105 5.15e-11 63.2
Msa0015810 AT5G61420.1 70.270 37 11 0 87 123 2 38 7.55e-11 62.0
Msa0015810 AT1G74650.3 65.000 40 14 0 84 123 2 41 9.08e-11 61.2

Find 56 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCAATGAAATGATTATT+AGG 0.232313 1_1:+25919850 None:intergenic
CAAAAGCTTTCATCAATTTC+AGG 0.250594 1_1:+25919718 None:intergenic
CATCATCATCAAAAGGGTTT+TGG 0.270158 1_1:+25919578 None:intergenic
TGAAAAGAAGGGATTGAAAA+AGG 0.278369 1_1:-25921210 Msa0015810:CDS
TGAATTGGGTTGGTTATTAT+TGG 0.287497 1_1:+25919963 None:intergenic
ATTTCATTGTCTGTTCTTCC+AGG 0.290962 1_1:+25920030 None:intergenic
CTGAAATTGATGAAAGCTTT+TGG 0.299877 1_1:-25919717 Msa0015810:CDS
TAATAATCATTTCATTGAAA+TGG 0.311485 1_1:-25919848 Msa0015810:CDS
AAATTTCCTCTCTTAATATC+AGG 0.325119 1_1:+25920899 None:intergenic
TGATGATGATATGATGTAAA+AGG 0.325400 1_1:-25919330 Msa0015810:three_prime_UTR
GAACAAATACCTGCATGTTT+TGG 0.334771 1_1:+25921110 None:intergenic
TTGAAAGGGTATGGTTGATT+TGG 0.356811 1_1:+25919619 None:intergenic
TTGTAACAGATTATATCATT+AGG 0.363648 1_1:-25919243 Msa0015810:three_prime_UTR
TTCAATAGCAAGTCATTCAT+TGG 0.372462 1_1:-25919360 Msa0015810:three_prime_UTR
TTCAGTTATAGTGCTGGAAT+TGG 0.372489 1_1:+25919894 None:intergenic
TTCAATTTGTTCGTTACAAT+AGG 0.375738 1_1:-25919409 Msa0015810:three_prime_UTR
AATATACCGTGCAAAACATT+AGG 0.390015 1_1:-25919285 Msa0015810:three_prime_UTR
GAGGATTTCATCTTCCTCTA+AGG 0.392145 1_1:+25921178 None:intergenic
AGTAACACACCATCAAAATA+TGG 0.417438 1_1:+25919474 None:intergenic
TGCATGAGTCACTGGGGAAC+AGG 0.418688 1_1:-25920844 Msa0015810:intron
AAAGGGTCCTTGGACCTTAG+AGG 0.420566 1_1:-25921192 Msa0015810:CDS
CATCAAGATGCATGAGTCAC+TGG 0.430430 1_1:-25920852 Msa0015810:CDS
TGATTATTAGGACTATTAGA+AGG 0.435165 1_1:+25919862 None:intergenic
AGCAAGTCATTCATTGGTAA+AGG 0.440163 1_1:-25919354 Msa0015810:three_prime_UTR
GGCTCCTTGTTGTGAAAAGA+AGG 0.442620 1_1:-25921222 Msa0015810:CDS
ACTGAATTATTGAAAGGGTA+TGG 0.451953 1_1:+25919610 None:intergenic
GTTGACGTGTTCATCAAATC+AGG 0.454653 1_1:-25919538 Msa0015810:CDS
ATGCCATCATCATCATCAAA+AGG 0.459761 1_1:+25919571 None:intergenic
ATAAACATGGACATAGCAAT+TGG 0.459805 1_1:-25921142 Msa0015810:CDS
GCCATAGCAGCAAAATTGCC+TGG 0.464914 1_1:-25920048 Msa0015810:CDS
ATGATATAAGTCTAAAACTC+TGG 0.464984 1_1:+25919499 None:intergenic
TTTCCACTGAATTATTGAAA+GGG 0.484234 1_1:+25919605 None:intergenic
GCAAGTCATTCATTGGTAAA+GGG 0.484448 1_1:-25919353 Msa0015810:three_prime_UTR
ATATTTGTCATAGAATTTGA+AGG 0.496789 1_1:+25919655 None:intergenic
ATTGTCACAAATGAGTCTTC+AGG 0.502135 1_1:+25919742 None:intergenic
TGTCATAGAATTTGAAGGCA+TGG 0.509443 1_1:+25919660 None:intergenic
ATATGATTCAGTTATAGTGC+TGG 0.510879 1_1:+25919888 None:intergenic
TTGTTCGTTACAATAGGTGA+AGG 0.516593 1_1:-25919403 Msa0015810:three_prime_UTR
TTTGCAGGTTTATTAAGATG+TGG 0.531442 1_1:-25920959 Msa0015810:CDS
GATGATGATATGATGTAAAA+GGG 0.533575 1_1:-25919329 Msa0015810:three_prime_UTR
ATCAAGATGCATGAGTCACT+GGG 0.537633 1_1:-25920851 Msa0015810:CDS
TGCCATCATCATCATCAAAA+GGG 0.537845 1_1:+25919572 None:intergenic
GGTTACAAGTTCACATAACT+CGG 0.544375 1_1:+25919181 None:intergenic
TCATCTTCCTCTAAGGTCCA+AGG 0.559081 1_1:+25921185 None:intergenic
GAAAGAGTTGTCGATTGAGA+TGG 0.564322 1_1:-25920937 Msa0015810:CDS
TTAAAACCTGATATTAAGAG+AGG 0.565110 1_1:-25920905 Msa0015810:CDS
GCTCCTTGTTGTGAAAAGAA+GGG 0.589438 1_1:-25921221 Msa0015810:CDS
TGTTCGTTACAATAGGTGAA+GGG 0.591655 1_1:-25919402 Msa0015810:three_prime_UTR
ATACCCTTTCAATAATTCAG+TGG 0.598812 1_1:-25919608 Msa0015810:CDS
CATCTTGAAAATGAGACAAG+AGG 0.606998 1_1:+25921250 None:intergenic
CGTGCCCTACCAAAACATGC+AGG 0.611878 1_1:-25921119 Msa0015810:intron
ACATCATACATCAATAAACA+TGG 0.617616 1_1:-25921155 Msa0015810:CDS
ATCTTGAAAATGAGACAAGA+GGG 0.618926 1_1:+25921251 None:intergenic
CATAGAATTTGAAGGCATGG+TGG 0.627490 1_1:+25919663 None:intergenic
GTTTATTGATGTATGATGTG+AGG 0.651160 1_1:+25921159 None:intergenic
TCAAGATGCATGAGTCACTG+GGG 0.758088 1_1:-25920850 Msa0015810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATTAATTAATTTATAA+AGG - chr1_1:25919980-25919999 Msa0015810:CDS 0.0%
!! TAATATTAATTAATTTATAA+AGG - chr1_1:25919980-25919999 Msa0015810:CDS 0.0%
!! CTTGATAAATATTACTTTAT+AGG - chr1_1:25919402-25919421 Msa0015810:three_prime_UTR 15.0%
!! TAGATATAATATTATACTTC+TGG - chr1_1:25919451-25919470 Msa0015810:three_prime_UTR 15.0%
!! AGATATAATATTATACTTCT+GGG - chr1_1:25919452-25919471 Msa0015810:three_prime_UTR 15.0%
!!! TTTGTTTTTAAAACTGAATT+TGG - chr1_1:25919786-25919805 Msa0015810:CDS 15.0%
!!! TTGTTTTTAAAACTGAATTT+GGG - chr1_1:25919787-25919806 Msa0015810:CDS 15.0%
!! GTGTAGTTTAATATATAAAA+TGG - chr1_1:25920048-25920067 Msa0015810:CDS 15.0%
!! ATCAAAATTAAGATAATACT+AGG - chr1_1:25920138-25920157 Msa0015810:intron 15.0%
!! ACAATGAAATAAAAAATGTA+TGG - chr1_1:25920466-25920485 Msa0015810:intron 15.0%
!! ATTTCAATGAAATGATTATT+AGG + chr1_1:25920636-25920655 None:intergenic 15.0%
!! TAATAATCATTTCATTGAAA+TGG - chr1_1:25920635-25920654 Msa0015810:intron 15.0%
!! CTTGATAAATATTACTTTAT+AGG - chr1_1:25919402-25919421 Msa0015810:three_prime_UTR 15.0%
!! TAGATATAATATTATACTTC+TGG - chr1_1:25919451-25919470 Msa0015810:three_prime_UTR 15.0%
!! AGATATAATATTATACTTCT+GGG - chr1_1:25919452-25919471 Msa0015810:three_prime_UTR 15.0%
!!! TTTGTTTTTAAAACTGAATT+TGG - chr1_1:25919786-25919805 Msa0015810:CDS 15.0%
!!! TTGTTTTTAAAACTGAATTT+GGG - chr1_1:25919787-25919806 Msa0015810:CDS 15.0%
!! GTGTAGTTTAATATATAAAA+TGG - chr1_1:25920048-25920067 Msa0015810:CDS 15.0%
!! ATCAAAATTAAGATAATACT+AGG - chr1_1:25920138-25920157 Msa0015810:intron 15.0%
!! ACAATGAAATAAAAAATGTA+TGG - chr1_1:25920466-25920485 Msa0015810:intron 15.0%
!! ATTTCAATGAAATGATTATT+AGG + chr1_1:25920636-25920655 None:intergenic 15.0%
!! TAATAATCATTTCATTGAAA+TGG - chr1_1:25920635-25920654 Msa0015810:intron 15.0%
!!! AAATTTTTCAAATGAAGAAG+AGG - chr1_1:25919601-25919620 Msa0015810:CDS 20.0%
!! AGGTAATACATATATTCAAT+TGG - chr1_1:25919659-25919678 Msa0015810:CDS 20.0%
!!! TTGCAATAAACAACAAATTT+TGG + chr1_1:25920279-25920298 None:intergenic 20.0%
!! AATATTTAATTCTTGCTTTC+AGG - chr1_1:25920406-25920425 Msa0015810:intron 20.0%
!!! TTGTTTTAATACTCTCTTTT+TGG + chr1_1:25920550-25920569 None:intergenic 20.0%
!! ATATTTGTCATAGAATTTGA+AGG + chr1_1:25920831-25920850 None:intergenic 20.0%
!! TTGTAACAGATTATATCATT+AGG - chr1_1:25921240-25921259 Msa0015810:exon 20.0%
!!! AAATTTTTCAAATGAAGAAG+AGG - chr1_1:25919601-25919620 Msa0015810:CDS 20.0%
!! AGGTAATACATATATTCAAT+TGG - chr1_1:25919659-25919678 Msa0015810:CDS 20.0%
!!! TTGCAATAAACAACAAATTT+TGG + chr1_1:25920279-25920298 None:intergenic 20.0%
!! AATATTTAATTCTTGCTTTC+AGG - chr1_1:25920406-25920425 Msa0015810:intron 20.0%
!!! TTGTTTTAATACTCTCTTTT+TGG + chr1_1:25920550-25920569 None:intergenic 20.0%
!! ATATTTGTCATAGAATTTGA+AGG + chr1_1:25920831-25920850 None:intergenic 20.0%
!! TTGTAACAGATTATATCATT+AGG - chr1_1:25921240-25921259 Msa0015810:exon 20.0%
! ACATCATACATCAATAAACA+TGG - chr1_1:25919328-25919347 Msa0015810:three_prime_UTR 25.0%
!!! ATTATACTTCTGGGATAATT+TGG - chr1_1:25919461-25919480 Msa0015810:three_prime_UTR 25.0%
!!! TATCTTTTGTGTGTTGATTT+AGG - chr1_1:25919491-25919510 Msa0015810:exon 25.0%
!!! TTAGGTTTTGTAAATTTTGC+AGG - chr1_1:25919509-25919528 Msa0015810:exon 25.0%
! TTAAAACCTGATATTAAGAG+AGG - chr1_1:25919578-25919597 Msa0015810:CDS 25.0%
! AAATTTCCTCTCTTAATATC+AGG + chr1_1:25919587-25919606 None:intergenic 25.0%
!! AAGACTACAAATTCTGAAAA+AGG + chr1_1:25919719-25919738 None:intergenic 25.0%
! TGTTTCTTATAACTGCATTT+CGG - chr1_1:25919856-25919875 Msa0015810:CDS 25.0%
! AGTAGACAATATTTAAGTAG+TGG - chr1_1:25919944-25919963 Msa0015810:CDS 25.0%
! GTAGACAATATTTAAGTAGT+GGG - chr1_1:25919945-25919964 Msa0015810:CDS 25.0%
! TAGACAATATTTAAGTAGTG+GGG - chr1_1:25919946-25919965 Msa0015810:CDS 25.0%
! TGATTATTAGGACTATTAGA+AGG + chr1_1:25920624-25920643 None:intergenic 25.0%
! TTCATCACAAGGAAAAAATT+TGG - chr1_1:25920695-25920714 Msa0015810:intron 25.0%
! TTTCCACTGAATTATTGAAA+GGG + chr1_1:25920881-25920900 None:intergenic 25.0%
!! TTTTCCACTGAATTATTGAA+AGG + chr1_1:25920882-25920901 None:intergenic 25.0%
!! ATGATATAAGTCTAAAACTC+TGG + chr1_1:25920987-25921006 None:intergenic 25.0%
!!! ATATCATGACCATATTTTGA+TGG - chr1_1:25921000-25921019 Msa0015810:intron 25.0%
!! TTCAATTTGTTCGTTACAAT+AGG - chr1_1:25921074-25921093 Msa0015810:intron 25.0%
!! TGATGATGATATGATGTAAA+AGG - chr1_1:25921153-25921172 Msa0015810:CDS 25.0%
! GATGATGATATGATGTAAAA+GGG - chr1_1:25921154-25921173 Msa0015810:CDS 25.0%
! ACATCATACATCAATAAACA+TGG - chr1_1:25919328-25919347 Msa0015810:three_prime_UTR 25.0%
!!! ATTATACTTCTGGGATAATT+TGG - chr1_1:25919461-25919480 Msa0015810:three_prime_UTR 25.0%
!!! TATCTTTTGTGTGTTGATTT+AGG - chr1_1:25919491-25919510 Msa0015810:exon 25.0%
!!! TTAGGTTTTGTAAATTTTGC+AGG - chr1_1:25919509-25919528 Msa0015810:exon 25.0%
! TTAAAACCTGATATTAAGAG+AGG - chr1_1:25919578-25919597 Msa0015810:CDS 25.0%
! AAATTTCCTCTCTTAATATC+AGG + chr1_1:25919587-25919606 None:intergenic 25.0%
!! AAGACTACAAATTCTGAAAA+AGG + chr1_1:25919719-25919738 None:intergenic 25.0%
! TGTTTCTTATAACTGCATTT+CGG - chr1_1:25919856-25919875 Msa0015810:CDS 25.0%
! AGTAGACAATATTTAAGTAG+TGG - chr1_1:25919944-25919963 Msa0015810:CDS 25.0%
! GTAGACAATATTTAAGTAGT+GGG - chr1_1:25919945-25919964 Msa0015810:CDS 25.0%
! TAGACAATATTTAAGTAGTG+GGG - chr1_1:25919946-25919965 Msa0015810:CDS 25.0%
! TGATTATTAGGACTATTAGA+AGG + chr1_1:25920624-25920643 None:intergenic 25.0%
! TTCATCACAAGGAAAAAATT+TGG - chr1_1:25920695-25920714 Msa0015810:intron 25.0%
! TTTCCACTGAATTATTGAAA+GGG + chr1_1:25920881-25920900 None:intergenic 25.0%
!! TTTTCCACTGAATTATTGAA+AGG + chr1_1:25920882-25920901 None:intergenic 25.0%
!! ATGATATAAGTCTAAAACTC+TGG + chr1_1:25920987-25921006 None:intergenic 25.0%
!!! ATATCATGACCATATTTTGA+TGG - chr1_1:25921000-25921019 Msa0015810:intron 25.0%
!! TTCAATTTGTTCGTTACAAT+AGG - chr1_1:25921074-25921093 Msa0015810:intron 25.0%
!! TGATGATGATATGATGTAAA+AGG - chr1_1:25921153-25921172 Msa0015810:CDS 25.0%
! GATGATGATATGATGTAAAA+GGG - chr1_1:25921154-25921173 Msa0015810:CDS 25.0%
ATCTTGAAAATGAGACAAGA+GGG + chr1_1:25919235-25919254 None:intergenic 30.0%
!! TCTCATTTTCAAGATGGTTA+GGG - chr1_1:25919240-25919259 Msa0015810:three_prime_UTR 30.0%
TGAAAAGAAGGGATTGAAAA+AGG - chr1_1:25919273-25919292 Msa0015810:three_prime_UTR 30.0%
GAAAAGAAGGGATTGAAAAA+GGG - chr1_1:25919274-25919293 Msa0015810:three_prime_UTR 30.0%
GTTTATTGATGTATGATGTG+AGG + chr1_1:25919327-25919346 None:intergenic 30.0%
ATAAACATGGACATAGCAAT+TGG - chr1_1:25919341-25919360 Msa0015810:three_prime_UTR 30.0%
TTTGCAGGTTTATTAAGATG+TGG - chr1_1:25919524-25919543 Msa0015810:CDS 30.0%
AAGTCTTAACCTCATATAGT+AGG - chr1_1:25919739-25919758 Msa0015810:CDS 30.0%
AGACAATATTTAAGTAGTGG+GGG - chr1_1:25919947-25919966 Msa0015810:CDS 30.0%
!!! CAAATTTTGGTTGCATTGAT+TGG + chr1_1:25920266-25920285 None:intergenic 30.0%
ATTTAATTCTTGCTTTCAGG+TGG - chr1_1:25920409-25920428 Msa0015810:intron 30.0%
!! TGAATTGGGTTGGTTATTAT+TGG + chr1_1:25920523-25920542 None:intergenic 30.0%
!!! CTCTTTTTGGTGTTTGAATT+GGG + chr1_1:25920537-25920556 None:intergenic 30.0%
!!! TCTCTTTTTGGTGTTTGAAT+TGG + chr1_1:25920538-25920557 None:intergenic 30.0%
ATATGATTCAGTTATAGTGC+TGG + chr1_1:25920598-25920617 None:intergenic 30.0%
! TCTAGTGATTTTTCATCACA+AGG - chr1_1:25920684-25920703 Msa0015810:intron 30.0%
CAAAAGCTTTCATCAATTTC+AGG + chr1_1:25920768-25920787 None:intergenic 30.0%
! CTGAAATTGATGAAAGCTTT+TGG - chr1_1:25920766-25920785 Msa0015810:intron 30.0%
ACTGAATTATTGAAAGGGTA+TGG + chr1_1:25920876-25920895 None:intergenic 30.0%
ATACCCTTTCAATAATTCAG+TGG - chr1_1:25920875-25920894 Msa0015810:CDS 30.0%
AGTAACACACCATCAAAATA+TGG + chr1_1:25921012-25921031 None:intergenic 30.0%
TTCAATAGCAAGTCATTCAT+TGG - chr1_1:25921123-25921142 Msa0015810:CDS 30.0%
AATATACCGTGCAAAACATT+AGG - chr1_1:25921198-25921217 Msa0015810:CDS 30.0%
! TCTCTTGTGTTCTTTAGAAA+CGG + chr1_1:25919166-25919185 None:intergenic 30.0%
ATCTTGAAAATGAGACAAGA+GGG + chr1_1:25919235-25919254 None:intergenic 30.0%
!! TCTCATTTTCAAGATGGTTA+GGG - chr1_1:25919240-25919259 Msa0015810:three_prime_UTR 30.0%
TGAAAAGAAGGGATTGAAAA+AGG - chr1_1:25919273-25919292 Msa0015810:three_prime_UTR 30.0%
GAAAAGAAGGGATTGAAAAA+GGG - chr1_1:25919274-25919293 Msa0015810:three_prime_UTR 30.0%
GTTTATTGATGTATGATGTG+AGG + chr1_1:25919327-25919346 None:intergenic 30.0%
ATAAACATGGACATAGCAAT+TGG - chr1_1:25919341-25919360 Msa0015810:three_prime_UTR 30.0%
TTTGCAGGTTTATTAAGATG+TGG - chr1_1:25919524-25919543 Msa0015810:CDS 30.0%
AAGTCTTAACCTCATATAGT+AGG - chr1_1:25919739-25919758 Msa0015810:CDS 30.0%
AGACAATATTTAAGTAGTGG+GGG - chr1_1:25919947-25919966 Msa0015810:CDS 30.0%
!!! CAAATTTTGGTTGCATTGAT+TGG + chr1_1:25920266-25920285 None:intergenic 30.0%
ATTTAATTCTTGCTTTCAGG+TGG - chr1_1:25920409-25920428 Msa0015810:intron 30.0%
!! TGAATTGGGTTGGTTATTAT+TGG + chr1_1:25920523-25920542 None:intergenic 30.0%
!!! CTCTTTTTGGTGTTTGAATT+GGG + chr1_1:25920537-25920556 None:intergenic 30.0%
!!! TCTCTTTTTGGTGTTTGAAT+TGG + chr1_1:25920538-25920557 None:intergenic 30.0%
ATATGATTCAGTTATAGTGC+TGG + chr1_1:25920598-25920617 None:intergenic 30.0%
! TCTAGTGATTTTTCATCACA+AGG - chr1_1:25920684-25920703 Msa0015810:intron 30.0%
CAAAAGCTTTCATCAATTTC+AGG + chr1_1:25920768-25920787 None:intergenic 30.0%
! CTGAAATTGATGAAAGCTTT+TGG - chr1_1:25920766-25920785 Msa0015810:intron 30.0%
ACTGAATTATTGAAAGGGTA+TGG + chr1_1:25920876-25920895 None:intergenic 30.0%
ATACCCTTTCAATAATTCAG+TGG - chr1_1:25920875-25920894 Msa0015810:CDS 30.0%
AGTAACACACCATCAAAATA+TGG + chr1_1:25921012-25921031 None:intergenic 30.0%
TTCAATAGCAAGTCATTCAT+TGG - chr1_1:25921123-25921142 Msa0015810:CDS 30.0%
AATATACCGTGCAAAACATT+AGG - chr1_1:25921198-25921217 Msa0015810:CDS 30.0%
CATCTTGAAAATGAGACAAG+AGG + chr1_1:25919236-25919255 None:intergenic 35.0%
!! CTCTTGTCTCATTTTCAAGA+TGG - chr1_1:25919234-25919253 Msa0015810:three_prime_UTR 35.0%
!! GTCTCATTTTCAAGATGGTT+AGG - chr1_1:25919239-25919258 Msa0015810:three_prime_UTR 35.0%
! AATCCCTTCTTTTCACAACA+AGG + chr1_1:25919268-25919287 None:intergenic 35.0%
!!! AATACCTGCATGTTTTGGTA+GGG + chr1_1:25919371-25919390 None:intergenic 35.0%
!!! AAATACCTGCATGTTTTGGT+AGG + chr1_1:25919372-25919391 None:intergenic 35.0%
! GAACAAATACCTGCATGTTT+TGG + chr1_1:25919376-25919395 None:intergenic 35.0%
! GACAATATTTAAGTAGTGGG+GGG - chr1_1:25919948-25919967 Msa0015810:CDS 35.0%
ATTTCATTGTCTGTTCTTCC+AGG + chr1_1:25920456-25920475 None:intergenic 35.0%
!!! TTTTGGTGTTTGAATTGGGT+TGG + chr1_1:25920533-25920552 None:intergenic 35.0%
! TTCAGTTATAGTGCTGGAAT+TGG + chr1_1:25920592-25920611 None:intergenic 35.0%
ATTGTCACAAATGAGTCTTC+AGG + chr1_1:25920744-25920763 None:intergenic 35.0%
TGTCATAGAATTTGAAGGCA+TGG + chr1_1:25920826-25920845 None:intergenic 35.0%
! TTGAAAGGGTATGGTTGATT+TGG + chr1_1:25920867-25920886 None:intergenic 35.0%
! CATCATCATCAAAAGGGTTT+TGG + chr1_1:25920908-25920927 None:intergenic 35.0%
!!! AACCCTTTTGATGATGATGA+TGG - chr1_1:25920909-25920928 Msa0015810:CDS 35.0%
TGCCATCATCATCATCAAAA+GGG + chr1_1:25920914-25920933 None:intergenic 35.0%
ATGCCATCATCATCATCAAA+AGG + chr1_1:25920915-25920934 None:intergenic 35.0%
!!! TTTTGATGATGATGATGGCA+TGG - chr1_1:25920914-25920933 Msa0015810:CDS 35.0%
!!! ATGATGATGGCATGGATTTT+TGG - chr1_1:25920922-25920941 Msa0015810:CDS 35.0%
!!! TGATGATGGCATGGATTTTT+GGG - chr1_1:25920923-25920942 Msa0015810:CDS 35.0%
TTGTTCGTTACAATAGGTGA+AGG - chr1_1:25921080-25921099 Msa0015810:intron 35.0%
TGTTCGTTACAATAGGTGAA+GGG - chr1_1:25921081-25921100 Msa0015810:intron 35.0%
AGCAAGTCATTCATTGGTAA+AGG - chr1_1:25921129-25921148 Msa0015810:CDS 35.0%
GCAAGTCATTCATTGGTAAA+GGG - chr1_1:25921130-25921149 Msa0015810:CDS 35.0%
! AGCTAACCTAATGTTTTGCA+CGG + chr1_1:25921207-25921226 None:intergenic 35.0%
GGTTACAAGTTCACATAACT+CGG + chr1_1:25921305-25921324 None:intergenic 35.0%
CATCTTGAAAATGAGACAAG+AGG + chr1_1:25919236-25919255 None:intergenic 35.0%
!! CTCTTGTCTCATTTTCAAGA+TGG - chr1_1:25919234-25919253 Msa0015810:three_prime_UTR 35.0%
!! GTCTCATTTTCAAGATGGTT+AGG - chr1_1:25919239-25919258 Msa0015810:three_prime_UTR 35.0%
! AATCCCTTCTTTTCACAACA+AGG + chr1_1:25919268-25919287 None:intergenic 35.0%
!!! AATACCTGCATGTTTTGGTA+GGG + chr1_1:25919371-25919390 None:intergenic 35.0%
!!! AAATACCTGCATGTTTTGGT+AGG + chr1_1:25919372-25919391 None:intergenic 35.0%
! GAACAAATACCTGCATGTTT+TGG + chr1_1:25919376-25919395 None:intergenic 35.0%
! GACAATATTTAAGTAGTGGG+GGG - chr1_1:25919948-25919967 Msa0015810:CDS 35.0%
ATTTCATTGTCTGTTCTTCC+AGG + chr1_1:25920456-25920475 None:intergenic 35.0%
!!! TTTTGGTGTTTGAATTGGGT+TGG + chr1_1:25920533-25920552 None:intergenic 35.0%
! TTCAGTTATAGTGCTGGAAT+TGG + chr1_1:25920592-25920611 None:intergenic 35.0%
ATTGTCACAAATGAGTCTTC+AGG + chr1_1:25920744-25920763 None:intergenic 35.0%
TGTCATAGAATTTGAAGGCA+TGG + chr1_1:25920826-25920845 None:intergenic 35.0%
! TTGAAAGGGTATGGTTGATT+TGG + chr1_1:25920867-25920886 None:intergenic 35.0%
! CATCATCATCAAAAGGGTTT+TGG + chr1_1:25920908-25920927 None:intergenic 35.0%
!!! AACCCTTTTGATGATGATGA+TGG - chr1_1:25920909-25920928 Msa0015810:CDS 35.0%
TGCCATCATCATCATCAAAA+GGG + chr1_1:25920914-25920933 None:intergenic 35.0%
ATGCCATCATCATCATCAAA+AGG + chr1_1:25920915-25920934 None:intergenic 35.0%
!!! TTTTGATGATGATGATGGCA+TGG - chr1_1:25920914-25920933 Msa0015810:CDS 35.0%
!!! ATGATGATGGCATGGATTTT+TGG - chr1_1:25920922-25920941 Msa0015810:CDS 35.0%
!!! TGATGATGGCATGGATTTTT+GGG - chr1_1:25920923-25920942 Msa0015810:CDS 35.0%
TTGTTCGTTACAATAGGTGA+AGG - chr1_1:25921080-25921099 Msa0015810:intron 35.0%
TGTTCGTTACAATAGGTGAA+GGG - chr1_1:25921081-25921100 Msa0015810:intron 35.0%
AGCAAGTCATTCATTGGTAA+AGG - chr1_1:25921129-25921148 Msa0015810:CDS 35.0%
GCAAGTCATTCATTGGTAAA+GGG - chr1_1:25921130-25921149 Msa0015810:CDS 35.0%
! AGCTAACCTAATGTTTTGCA+CGG + chr1_1:25921207-25921226 None:intergenic 35.0%
GGTTACAAGTTCACATAACT+CGG + chr1_1:25921305-25921324 None:intergenic 35.0%
! GCTCCTTGTTGTGAAAAGAA+GGG - chr1_1:25919262-25919281 Msa0015810:three_prime_UTR 40.0%
GAGGATTTCATCTTCCTCTA+AGG + chr1_1:25919308-25919327 None:intergenic 40.0%
! GAAAGAGTTGTCGATTGAGA+TGG - chr1_1:25919546-25919565 Msa0015810:CDS 40.0%
ATCAAGATGCATGAGTCACT+GGG - chr1_1:25919632-25919651 Msa0015810:CDS 40.0%
AGCTAGCATCCTACTATATG+AGG + chr1_1:25919751-25919770 None:intergenic 40.0%
GCATAGTGCTATGTATGTCA+AGG + chr1_1:25920236-25920255 None:intergenic 40.0%
! CATAGAATTTGAAGGCATGG+TGG + chr1_1:25920823-25920842 None:intergenic 40.0%
GTTGACGTGTTCATCAAATC+AGG - chr1_1:25920945-25920964 Msa0015810:CDS 40.0%
! GCTCCTTGTTGTGAAAAGAA+GGG - chr1_1:25919262-25919281 Msa0015810:three_prime_UTR 40.0%
GAGGATTTCATCTTCCTCTA+AGG + chr1_1:25919308-25919327 None:intergenic 40.0%
! GAAAGAGTTGTCGATTGAGA+TGG - chr1_1:25919546-25919565 Msa0015810:CDS 40.0%
ATCAAGATGCATGAGTCACT+GGG - chr1_1:25919632-25919651 Msa0015810:CDS 40.0%
AGCTAGCATCCTACTATATG+AGG + chr1_1:25919751-25919770 None:intergenic 40.0%
GCATAGTGCTATGTATGTCA+AGG + chr1_1:25920236-25920255 None:intergenic 40.0%
! CATAGAATTTGAAGGCATGG+TGG + chr1_1:25920823-25920842 None:intergenic 40.0%
GTTGACGTGTTCATCAAATC+AGG - chr1_1:25920945-25920964 Msa0015810:CDS 40.0%
! GGCTCCTTGTTGTGAAAAGA+AGG - chr1_1:25919261-25919280 Msa0015810:three_prime_UTR 45.0%
AGGGATTGAAAAAGGGTCCT+TGG - chr1_1:25919281-25919300 Msa0015810:three_prime_UTR 45.0%
!! TCATCTTCCTCTAAGGTCCA+AGG + chr1_1:25919301-25919320 None:intergenic 45.0%
CATCAAGATGCATGAGTCAC+TGG - chr1_1:25919631-25919650 Msa0015810:CDS 45.0%
TCAAGATGCATGAGTCACTG+GGG - chr1_1:25919633-25919652 Msa0015810:CDS 45.0%
! TCCAGGCAATTTTGCTGCTA+TGG + chr1_1:25920439-25920458 None:intergenic 45.0%
! GGCTCCTTGTTGTGAAAAGA+AGG - chr1_1:25919261-25919280 Msa0015810:three_prime_UTR 45.0%
AGGGATTGAAAAAGGGTCCT+TGG - chr1_1:25919281-25919300 Msa0015810:three_prime_UTR 45.0%
!! TCATCTTCCTCTAAGGTCCA+AGG + chr1_1:25919301-25919320 None:intergenic 45.0%
CATCAAGATGCATGAGTCAC+TGG - chr1_1:25919631-25919650 Msa0015810:CDS 45.0%
TCAAGATGCATGAGTCACTG+GGG - chr1_1:25919633-25919652 Msa0015810:CDS 45.0%
! TCCAGGCAATTTTGCTGCTA+TGG + chr1_1:25920439-25920458 None:intergenic 45.0%
!!! AATTATACAATTATTTTTTT+AGG - chr1_1:25920189-25920208 Msa0015810:intron 5.0%
!!! AATTATACAATTATTTTTTT+AGG - chr1_1:25920189-25920208 Msa0015810:intron 5.0%
AAAGGGTCCTTGGACCTTAG+AGG - chr1_1:25919291-25919310 Msa0015810:three_prime_UTR 50.0%
GCCATAGCAGCAAAATTGCC+TGG - chr1_1:25920435-25920454 Msa0015810:intron 50.0%
AAAGGGTCCTTGGACCTTAG+AGG - chr1_1:25919291-25919310 Msa0015810:three_prime_UTR 50.0%
GCCATAGCAGCAAAATTGCC+TGG - chr1_1:25920435-25920454 Msa0015810:intron 50.0%
CGTGCCCTACCAAAACATGC+AGG - chr1_1:25919364-25919383 Msa0015810:three_prime_UTR 55.0%
TGCATGAGTCACTGGGGAAC+AGG - chr1_1:25919639-25919658 Msa0015810:CDS 55.0%
CGTGCCCTACCAAAACATGC+AGG - chr1_1:25919364-25919383 Msa0015810:three_prime_UTR 55.0%
TGCATGAGTCACTGGGGAAC+AGG - chr1_1:25919639-25919658 Msa0015810:CDS 55.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 25919165 25921340 25919165 ID=Msa0015810;Name=Msa0015810
chr1_1 mRNA 25919165 25921340 25919165 ID=Msa0015810-mRNA-1;Parent=Msa0015810;Name=Msa0015810-mRNA-1;_AED=0.21;_eAED=0.21;_QI=88|0.5|0.66|1|1|1|3|345|282
chr1_1 exon 25919165 25920077 25919165 ID=Msa0015810-mRNA-1:exon:8848;Parent=Msa0015810-mRNA-1
chr1_1 exon 25920845 25920992 25920845 ID=Msa0015810-mRNA-1:exon:8847;Parent=Msa0015810-mRNA-1
chr1_1 exon 25921120 25921340 25921120 ID=Msa0015810-mRNA-1:exon:8846;Parent=Msa0015810-mRNA-1
chr1_1 five_prime_UTR 25921253 25921340 25921253 ID=Msa0015810-mRNA-1:five_prime_utr;Parent=Msa0015810-mRNA-1
chr1_1 CDS 25921120 25921252 25921120 ID=Msa0015810-mRNA-1:cds;Parent=Msa0015810-mRNA-1
chr1_1 CDS 25920845 25920992 25920845 ID=Msa0015810-mRNA-1:cds;Parent=Msa0015810-mRNA-1
chr1_1 CDS 25919510 25920077 25919510 ID=Msa0015810-mRNA-1:cds;Parent=Msa0015810-mRNA-1
chr1_1 three_prime_UTR 25919165 25919509 25919165 ID=Msa0015810-mRNA-1:three_prime_utr;Parent=Msa0015810-mRNA-1
Gene Sequence

>Msa0015810

ATGGTTAGGGCTCCTTGTTGTGAAAAGAAGGGATTGAAAAAGGGTCCTTGGACCTTAGAGGAAGATGAAATCCTCACATCATACATCAATAAACATGGACATAGCAATTGGCGTGCCCTACCAAAACATGCAGGTTTTGTAAATTTTGCAGGTTTATTAAGATGTGGAAAGAGTTGTCGATTGAGATGGATTAACTATTTAAAACCTGATATTAAGAGAGGAAATTTTTCAAATGAAGAAGAGGAAACTATCATCAAGATGCATGAGTCACTGGGGAACAGGTGGTCAGCCATAGCAGCAAAATTGCCTGGAAGAACAGACAATGAAATAAAAAATGTATGGCACACTCACTTGAAGAAAAGACTATTGAATACCAATAATAACCAACCCAATTCAAACACCAAAAAGAGAGTATTAAAACAAAAAATCAAAAGATCTGATTCCAATTCCAGCACTATAACTGAATCATATGAACCTTCTAATAGTCCTAATAATCATTTCATTGAAATGGAAACTACATCATCAAATTGCACATTTTCTAGTGATTTTTCATCACAAGGAAAAAATTTGGACAATAGCATCATTTGTGAAGAGCCTGAAGACTCATTTGTGACAATGCCTGAAATTGATGAAAGCTTTTGGTCAGAGACAGTAATTGATGATGAAATTAGTTCCACCATGCCTTCAAATTCTATGACAAATATTTCAAATGAACTACCAAATCAACCATACCCTTTCAATAATTCAGTGGAAAATTTCCAAAACCCTTTTGATGATGATGATGGCATGGATTTTTGGGTTGACGTGTTCATCAAATCAGGAGAATCAACAGAATTGCCAGAGTTTTAG
Protein sequence

>Msa0015810

MVRAPCCEKKGLKKGPWTLEEDEILTSYINKHGHSNWRALPKHAGFVNFAGLLRCGKSCRLRWINYLKPDIKRGNFSNEEEETIIKMHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLLNTNNNQPNSNTKKRVLKQKIKRSDSNSSTITESYEPSNSPNNHFIEMETTSSNCTFSSDFSSQGKNLDNSIICEEPEDSFVTMPEIDESFWSETVIDDEISSTMPSNSMTNISNELPNQPYPFNNSVENFQNPFDDDDGMDFWVDVFIKSGESTELPEF*