AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0159980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0159980 MtrunA17_Chr1g0187001 85.331 634 52 7 408 1009 23 647 0.0 1070
Msa0159980 MtrunA17_Chr1g0187001 39.934 303 146 4 53 330 2 293 3.33e-54 200
Msa0159980 MtrunA17_Chr1g0187001 43.902 82 44 1 311 392 368 447 1.38e-15 81.6
Msa0159980 MtrunA17_Chr1g0187001 51.613 62 24 1 389 444 565 626 7.43e-12 69.3
Msa0159980 MtrunA17_Chr1g0186981 56.114 597 222 9 441 1000 71 664 0.0 668
Msa0159980 MtrunA17_Chr1g0186981 46.474 312 133 7 43 322 8 317 3.46e-65 233
Msa0159980 MtrunA17_Chr1g0186981 47.945 73 38 0 311 383 393 465 1.91e-14 77.8
Msa0159980 MtrunA17_Chr1g0186981 53.333 60 23 1 389 443 593 652 1.72e-12 71.6
Msa0159980 MtrunA17_Chr1g0186991 48.142 592 261 9 449 1000 83 668 0.0 551
Msa0159980 MtrunA17_Chr1g0186991 73.375 323 53 3 32 322 1 322 1.76e-146 452
Msa0159980 MtrunA17_Chr1g0186991 60.000 115 32 1 274 388 377 477 4.52e-33 137
Msa0159980 MtrunA17_Chr1g0186991 87.500 56 7 0 388 443 601 656 3.41e-24 108
Msa0159980 MtrunA17_Chr1g0165791 45.696 639 281 13 424 1007 65 692 2.66e-173 523
Msa0159980 MtrunA17_Chr1g0165791 31.778 343 174 8 32 322 1 335 1.29e-33 139
Msa0159980 MtrunA17_Chr1g0165791 49.296 71 34 1 313 383 413 481 1.09e-13 75.5
Msa0159980 MtrunA17_Chr1g0186841 31.137 607 345 16 452 1008 87 670 2.13e-80 275
Msa0159980 MtrunA17_Chr1g0186841 28.239 301 153 7 62 303 21 317 2.84e-21 99.8
Msa0159980 MtrunA17_Chr1g0186851 30.705 596 345 14 451 998 85 660 5.94e-79 271
Msa0159980 MtrunA17_Chr1g0186851 25.625 320 175 8 62 322 20 335 1.34e-21 100
Msa0159980 MtrunA17_Chr1g0187041 30.435 598 346 15 451 998 85 662 3.12e-77 266
Msa0159980 MtrunA17_Chr1g0186861 30.705 596 345 14 451 998 87 662 4.58e-74 258
Msa0159980 MtrunA17_Chr1g0186861 23.457 324 179 8 62 322 20 337 8.17e-19 92.0
Msa0159980 MtrunA17_Chr1g0186911 30.862 580 333 14 467 998 1 560 7.83e-73 251
Msa0159980 MtrunA17_Chr1g0186911 26.180 233 151 6 107 322 7 235 1.65e-14 77.8
Msa0159980 MtrunA17_Chr8g0364451 66.897 145 32 4 415 557 9 139 3.00e-47 166
Msa0159980 MtrunA17_Chr8g0364451 47.253 91 47 1 103 192 51 141 6.75e-16 76.6
Msa0159980 MtrunA17_Chr7g0226571 26.466 631 349 25 463 1000 104 712 4.94e-41 162
Msa0159980 MtrunA17_Chr8g0381301 25.512 635 368 21 453 999 87 704 4.18e-38 152
Msa0159980 MtrunA17_Chr3g0116601 24.960 625 355 21 463 997 104 704 5.39e-32 134
Msa0159980 MtrunA17_Chr3g0116601 28.627 255 152 10 85 313 90 340 4.85e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0159980 AT3G01680.1 25.000 676 389 26 420 998 74 728 2.52e-38 154
Msa0159980 AT3G01670.2 24.346 612 341 25 480 997 261 844 3.36e-26 116
Msa0159980 AT3G01670.1 24.346 612 341 25 480 997 237 820 4.17e-26 116

Find 194 sgRNAs with CRISPR-Local

Find 801 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATCTTGTCACATGCTTAT+TGG 0.174326 1_4:+31737122 Msa0159980:CDS
CTTGGGAGGTACCATTCTTT+TGG 0.182584 1_4:-31736307 None:intergenic
TAACCATCTTGTTTCCTAAA+AGG 0.185586 1_4:-31749636 None:intergenic
CCAAAACCATTCCCATTTCT+TGG 0.191978 1_4:-31739490 None:intergenic
TAAGAGAGCATTTGAACTTT+TGG 0.194897 1_4:+31749520 Msa0159980:CDS
GCTGCTTTCACTTTGGAATA+TGG 0.196918 1_4:+31748262 Msa0159980:CDS
AAGTTTGCTATAGCTTAATT+TGG 0.200512 1_4:+31750507 Msa0159980:three_prime_UTR
ATTAATATCCTCAAGCTTAA+AGG 0.201141 1_4:-31736354 None:intergenic
CCAAGAAATGGGAATGGTTT+TGG 0.231767 1_4:+31739490 Msa0159980:CDS
AAGAATCAAATTTGGTCTTC+TGG 0.234379 1_4:-31749434 None:intergenic
GTGCAATTATGTATCTTAAT+AGG 0.245870 1_4:+31737019 Msa0159980:CDS
TGGTGGTGCCATCATATATT+AGG 0.251348 1_4:-31749132 None:intergenic
ATTCTTCAAAGAATCAAATT+TGG 0.263389 1_4:-31749442 None:intergenic
TCTGCCTCAACTCAGATTTC+TGG 0.271962 1_4:+31736464 Msa0159980:CDS
AAGAAATCTATAATATCTTT+AGG 0.277385 1_4:-31749076 None:intergenic
GAAAATTGCAGAGTGGAAAT+TGG 0.278729 1_4:+31737472 Msa0159980:CDS
AACTCTAGCTGCATTCTCTT+TGG 0.285355 1_4:+31736990 Msa0159980:CDS
CAAATACCACCAATATTTAT+AGG 0.291356 1_4:+31737700 Msa0159980:CDS
GCTGCATTCTCTTTGGAGTA+TGG 0.291746 1_4:+31736997 Msa0159980:CDS
GCCACTGATTGGTACATCTT+TGG 0.299017 1_4:-31736276 None:intergenic
AGCTTCAGTGTGCGAAATTC+TGG 0.306542 1_4:-31748014 None:intergenic
CAAGGGTGGAAAATAAATTA+TGG 0.321706 1_4:+31750649 Msa0159980:three_prime_UTR
GTCCCGGTGTTGGGCCCTTT+AGG 0.323698 1_4:+31749555 Msa0159980:CDS
GGAGCTGAGATTTCTGTTCT+TGG 0.330206 1_4:-31736325 None:intergenic
AGATTTGGTGGAGTTGATAA+TGG 0.334362 1_4:+31748390 Msa0159980:CDS
CTGAAGATATCTCCAAGAAA+TGG 0.341798 1_4:+31739478 Msa0159980:CDS
AAACTAATCAAATCACAAAT+AGG 0.346211 1_4:+31748903 Msa0159980:CDS
ACACGTCCACAAGTAGGATT+TGG 0.347065 1_4:-31750382 None:intergenic
AAGCTTAACATTGTAGCCTT+TGG 0.355728 1_4:-31750161 None:intergenic
TTAATATCCTCAAGCTTAAA+GGG 0.359624 1_4:-31736353 None:intergenic
CACTGTCCCTGTCACAGATT+TGG 0.361754 1_4:+31748375 Msa0159980:CDS
CATTCATTATTTCACCTAAA+GGG 0.366267 1_4:-31749569 None:intergenic
CCTCAAGCTTAAAGGGATTA+GGG 0.368926 1_4:-31736346 None:intergenic
CAAGGAAAATTATCTTTCAA+TGG 0.370179 1_4:+31739421 Msa0159980:CDS
TCCTCAAGCTTAAAGGGATT+AGG 0.375897 1_4:-31736347 None:intergenic
AAGCCTATTGTCCCGGTGTT+GGG 0.376535 1_4:+31749546 Msa0159980:CDS
GGGCCCAACACCGGGACAAT+AGG 0.377596 1_4:-31749549 None:intergenic
TAATGAGTTGAGGCCTCGTT+TGG 0.377882 1_4:+31737450 Msa0159980:CDS
AAAGGCATGAAACTATCTTA+AGG 0.378342 1_4:+31749954 Msa0159980:CDS
GAGCTGAGATTTCTGTTCTT+GGG 0.379012 1_4:-31736324 None:intergenic
GGATTCCTCTTGTTGTGTAT+TGG 0.381172 1_4:+31737235 Msa0159980:CDS
TGGGCAGACTGGTCTGCTTT+CGG 0.383729 1_4:+31737168 Msa0159980:CDS
GACAGATACATATTCATCTA+TGG 0.392852 1_4:+31749878 Msa0159980:CDS
AAGGAAAATTATCTTTCAAT+GGG 0.392951 1_4:+31739422 Msa0159980:CDS
TAGCATTGGAGAAAACAAAA+AGG 0.395952 1_4:+31749936 Msa0159980:CDS
ACTGAAGCTGATTTCTTGTC+AGG 0.401068 1_4:+31748028 Msa0159980:CDS
AACAGCTGAAAACCTATTCA+TGG 0.408837 1_4:+31748215 Msa0159980:CDS
ATCACCTCAGAGACTTCTCC+TGG 0.410904 1_4:+31736950 Msa0159980:CDS
AACCATCTTGTTTCCTAAAA+GGG 0.413161 1_4:-31749635 None:intergenic
TCATTCATTATTTCACCTAA+AGG 0.415370 1_4:-31749570 None:intergenic
TGGTTGTTGCCTATAAATAT+TGG 0.423025 1_4:-31737709 None:intergenic
ATCTATAATATCTTTAGGAT+TGG 0.424394 1_4:-31749071 None:intergenic
AGTTTGCTATAGCTTAATTT+GGG 0.424593 1_4:+31750508 Msa0159980:three_prime_UTR
TTCTATCCATGACAGATTGC+AGG 0.426349 1_4:+31749335 Msa0159980:CDS
TGGGTTGCAGTGCCACTGAT+TGG 0.434139 1_4:-31736287 None:intergenic
GTCTGCTTTCGGTTATGACT+TGG 0.434816 1_4:+31737179 Msa0159980:CDS
GAGAGTGAATCTTGGAATAC+AGG 0.438911 1_4:+31749701 Msa0159980:CDS
AAGGCATGAAACTATCTTAA+GGG 0.447013 1_4:+31749955 Msa0159980:CDS
CACACGTCCACAAGTAGGAT+TGG 0.462764 1_4:-31740993 None:intergenic
TGTTGGAGACAAGCTTGAAA+AGG 0.463060 1_4:-31736436 None:intergenic
TAAGCCTATTGTCCCGGTGT+TGG 0.463421 1_4:+31749545 Msa0159980:CDS
GGGTGAGATAAACTTTGTTA+AGG 0.465516 1_4:-31736379 None:intergenic
GATAAGAGGTTACAAGAAAG+AGG 0.466169 1_4:+31749374 Msa0159980:CDS
AATGTTGATAACAATATCAA+TGG 0.468009 1_4:+31750334 Msa0159980:CDS
TCAGCATCATTTATCCCAAA+AGG 0.468946 1_4:-31739459 None:intergenic
TAACCTCTTATCACTTCTTG+TGG 0.473257 1_4:-31749363 None:intergenic
TTCTCTGAGCTACCAGGGCG+TGG 0.475211 1_4:+31739309 Msa0159980:intron
CACGTCCACAAGTAGGATTT+GGG 0.476123 1_4:-31750381 None:intergenic
TGAAGATATCTCCAAGAAAT+GGG 0.476600 1_4:+31739479 Msa0159980:CDS
GCTACCATTGTTGCATGTAC+TGG 0.479451 1_4:+31737264 Msa0159980:CDS
TTCTGGTCATCGTCAAAGAC+GGG 0.481056 1_4:-31749417 None:intergenic
AGCCCTAGCTGCTTTCACTT+TGG 0.482034 1_4:+31748255 Msa0159980:CDS
CATTCATTATAACACCTTGA+GGG 0.485580 1_4:-31739392 None:intergenic
CACCTAAAGGGCCCAACACC+GGG 0.486188 1_4:-31749557 None:intergenic
CAAACAAGATCCACAAGGTT+GGG 0.491870 1_4:+31750129 Msa0159980:CDS
GTTACAAAGAGAGTGAATCT+TGG 0.495476 1_4:+31749693 Msa0159980:CDS
CACCTTGCTTAATTTCTGCT+AGG 0.495896 1_4:-31736172 None:intergenic
GAACCTTTCTGAATTGAACT+TGG 0.497414 1_4:-31737086 None:intergenic
CCCTAATCCCTTTAAGCTTG+AGG 0.498886 1_4:+31736346 Msa0159980:CDS
AGATAATGAGGAATATGATA+AGG 0.499016 1_4:+31736409 Msa0159980:CDS
TGTCCCTGTCACAGATTTGG+TGG 0.499340 1_4:+31748378 Msa0159980:CDS
GGAATCCATTGCATAGCATC+AGG 0.501216 1_4:-31737219 None:intergenic
TTCCTCATTATCTTTGACAT+GGG 0.501830 1_4:-31736399 None:intergenic
AACTCCACCAAATCTGTGAC+AGG 0.502153 1_4:-31748382 None:intergenic
CCAAGACTTCACCTTAGCAT+TGG 0.504765 1_4:+31749922 Msa0159980:CDS
GTTGGAGACAAGCTTGAAAA+GGG 0.511266 1_4:-31736435 None:intergenic
ATATTCATGAGTGGGCCACT+TGG 0.511273 1_4:+31748425 Msa0159980:CDS
AGGAGAAGTCTCTGAGGTGA+TGG 0.514175 1_4:-31736948 None:intergenic
TTGGGATAAGCCTATTGTCC+CGG 0.514609 1_4:+31749539 Msa0159980:CDS
CCAATGCTAAGGTGAAGTCT+TGG 0.515050 1_4:-31749922 None:intergenic
GTGTAAACAAGGTGGTTACA+TGG 0.516368 1_4:-31750619 None:intergenic
AGACAAGGCTAGCAGAAAGC+AGG 0.517579 1_4:+31747979 Msa0159980:intron
TAGCCAAGTTCAATTCAGAA+AGG 0.519066 1_4:+31737083 Msa0159980:CDS
GCAAGATGTGAATCTGAGAA+AGG 0.521040 1_4:+31750467 Msa0159980:exon
TTCTTTATTATCCCACGCCC+TGG 0.524143 1_4:-31739321 None:intergenic
GGAGATTATCTCCATTGCGT+TGG 0.528009 1_4:-31749111 None:intergenic
CACCCATGTCAAAGATAATG+AGG 0.528329 1_4:+31736397 Msa0159980:CDS
GAACACTTCTCTGAGCTACC+AGG 0.528519 1_4:+31739303 Msa0159980:intron
ACATTAAACAGTGGGCAGAC+TGG 0.529337 1_4:+31737157 Msa0159980:CDS
CTTGTTTACACTTTGATGCA+AGG 0.531412 1_4:+31750631 Msa0159980:three_prime_UTR
GAAAGTAGATATCAATATTG+AGG 0.532242 1_4:+31739524 Msa0159980:CDS
TTCTTGAGACTTCTGCTCAA+AGG 0.532253 1_4:+31737664 Msa0159980:CDS
AGTTGAGGCAGAGAGGATGT+TGG 0.533320 1_4:-31736453 None:intergenic
TCTCACAGTCTATAGCATCT+TGG 0.533674 1_4:-31750075 None:intergenic
GATAATCTCCTAATATATGA+TGG 0.534586 1_4:+31749124 Msa0159980:CDS
ACAAGATCAGTTATATCAGC+AGG 0.534782 1_4:-31737108 None:intergenic
TTGTTTACACTTTGATGCAA+GGG 0.535036 1_4:+31750632 Msa0159980:three_prime_UTR
TCCTACTTGTGGACGTGTGA+TGG 0.538034 1_4:+31750387 Msa0159980:CDS
CTGAGATTTCTGTTCTTGGG+AGG 0.538881 1_4:-31736321 None:intergenic
GTGAATCTGAGAAAGGGAAG+AGG 0.540503 1_4:+31750474 Msa0159980:exon
TCAAACAAGATCCACAAGGT+TGG 0.540906 1_4:+31750128 Msa0159980:CDS
ACACGTCCACAAGTAGGATT+GGG 0.544645 1_4:-31740992 None:intergenic
ATTCCTCATTATCTTTGACA+TGG 0.544802 1_4:-31736400 None:intergenic
ATTCCAAAGTGAAAGCAGCT+AGG 0.545603 1_4:-31748258 None:intergenic
AGGCTAGCAGAAAGCAGGGC+TGG 0.547942 1_4:+31747984 Msa0159980:CDS
AATCCACAAGAAGTGATAAG+AGG 0.548578 1_4:+31749360 Msa0159980:CDS
TCACCTAAAGGGCCCAACAC+CGG 0.548774 1_4:-31749558 None:intergenic
GGCACTGCAACCCAAAAGAA+TGG 0.549435 1_4:+31736296 Msa0159980:CDS
TCCTACTTGTGGACGTGTGA+TGG 0.553449 1_4:+31740997 Msa0159980:CDS
TCAACCAAAGTTTGACACAT+AGG 0.558825 1_4:-31750199 None:intergenic
TTCCAAAGTGAAAGCAGCTA+GGG 0.561594 1_4:-31748257 None:intergenic
GATGCTGCTGCTGCACAGAA+TGG 0.562892 1_4:+31750445 Msa0159980:CDS
CAAGGTGGTTACATGGCACT+AGG 0.562955 1_4:-31750612 None:intergenic
GTTAACAAGTTGATCTGATG+AGG 0.564705 1_4:-31748314 None:intergenic
ATAATAGAACACTATCACTT+GGG 0.564964 1_4:+31749986 Msa0159980:CDS
CAAGATGTGAATCTGAGAAA+GGG 0.565554 1_4:+31750468 Msa0159980:exon
TGAGCCTATGTGTCAAACTT+TGG 0.565697 1_4:+31750195 Msa0159980:CDS
TCTCATCGTCAACTTTGTTG+AGG 0.566939 1_4:-31749299 None:intergenic
TCATTCATTATAACACCTTG+AGG 0.567246 1_4:-31739393 None:intergenic
GATTACTCTTCTGAGTTACC+TGG 0.567472 1_4:+31749486 Msa0159980:CDS
CTTTGCCTGATGCTATGCAA+TGG 0.569668 1_4:+31737214 Msa0159980:CDS
CTTCTGGTCATCGTCAAAGA+CGG 0.570611 1_4:-31749418 None:intergenic
TATAATAGAACACTATCACT+TGG 0.574606 1_4:+31749985 Msa0159980:CDS
TTATAATGAATGAGAATGCA+AGG 0.574786 1_4:+31739403 Msa0159980:CDS
ACAGCTGAAAACCTATTCAT+GGG 0.576028 1_4:+31748216 Msa0159980:CDS
TGGGCCACTTGGTCTAGTGT+TGG 0.577097 1_4:+31748436 Msa0159980:CDS
TTGTTGCCTATAAATATTGG+TGG 0.577295 1_4:-31737706 None:intergenic
TATGTGAGTTACTAGGTGAA+AGG 0.578694 1_4:+31749854 Msa0159980:intron
TACATCTTTGGACAATGTAG+TGG 0.581007 1_4:-31736264 None:intergenic
GATTGTCCTGCAATCTGTCA+TGG 0.583670 1_4:-31749341 None:intergenic
GACAAGGCTAGCAGAAAGCA+GGG 0.584742 1_4:+31747980 Msa0159980:intron
ACTGTCCAATACACAACAAG+AGG 0.585978 1_4:-31737240 None:intergenic
TGCAATGCATCAGACAAAGA+AGG 0.586363 1_4:-31748478 None:intergenic
TTTACACTTTGATGCAAGGG+TGG 0.591700 1_4:+31750635 Msa0159980:three_prime_UTR
ACTTGTCCCAATCCTACTTG+TGG 0.591971 1_4:+31740986 Msa0159980:CDS
ATAGCGTTCGCCACGAGGCG+TGG 0.598525 1_4:-31748164 None:intergenic
AATAATGAATGATGATGCAA+TGG 0.598632 1_4:+31749581 Msa0159980:CDS
TGCTTCTGCATATTCATGAG+TGG 0.600233 1_4:+31748416 Msa0159980:CDS
TCATGCCCAAATCCTACTTG+TGG 0.601063 1_4:+31750376 Msa0159980:CDS
AGTTCCAGAAATCTGAGTTG+AGG 0.604866 1_4:-31736468 None:intergenic
AAGCTTCTGATCCAACGCAA+TGG 0.610030 1_4:+31749100 Msa0159980:CDS
ATGTGGTGGTTAATGAGTTG+AGG 0.610867 1_4:+31737440 Msa0159980:CDS
GTGAGAATAACCCAACCTTG+TGG 0.613884 1_4:-31750139 None:intergenic
TCTCTTATGAGTCTAATGCC+AGG 0.615558 1_4:-31749504 None:intergenic
CTTGCATCAAAGTGTAAACA+AGG 0.615589 1_4:-31750630 None:intergenic
AAACTGAATTATGATATTGG+TGG 0.615844 1_4:+31739345 Msa0159980:CDS
ATTCAATCATCAGACACACT+TGG 0.616321 1_4:+31737042 Msa0159980:CDS
GCTTCTGCATATTCATGAGT+GGG 0.617235 1_4:+31748417 Msa0159980:CDS
GGTTGGGTTATTCTCACCAA+AGG 0.619142 1_4:+31750145 Msa0159980:CDS
GCATGTACTGGTAACCTCGT+CGG 0.621064 1_4:+31737276 Msa0159980:CDS
ATATCTCCAAGAAATGGGAA+TGG 0.621656 1_4:+31739484 Msa0159980:CDS
TCTCTGAGCTACCAGGGCGT+GGG 0.623157 1_4:+31739310 Msa0159980:intron
AAATCTGAGTTGAGGCAGAG+AGG 0.625519 1_4:-31736460 None:intergenic
GTTACAAGACATTAAACAGT+GGG 0.627387 1_4:+31737149 Msa0159980:CDS
TTTGCAGTGATCAACCCTCA+AGG 0.628286 1_4:+31739378 Msa0159980:CDS
TCTGTGCAGCAGCAGCATCA+CGG 0.629610 1_4:-31750441 None:intergenic
TCACCTCAGAGACTTCTCCT+GGG 0.638066 1_4:+31736951 Msa0159980:CDS
TGCACATAGCGTTCGCCACG+AGG 0.640747 1_4:-31748169 None:intergenic
TCCAAAGATGTACCAATCAG+TGG 0.640910 1_4:+31736275 Msa0159980:CDS
CACCTAGCAGAAATTAAGCA+AGG 0.644336 1_4:+31736170 Msa0159980:CDS
AGGAAAATTATCTTTCAATG+GGG 0.652359 1_4:+31739423 Msa0159980:CDS
TCCATCACACGTCCACAAGT+AGG 0.659029 1_4:-31740998 None:intergenic
TCCATCACACGTCCACAAGT+AGG 0.659029 1_4:-31750388 None:intergenic
ATAACCAACACTAGACCAAG+TGG 0.664243 1_4:-31748440 None:intergenic
GTTACCAGTACATGCAACAA+TGG 0.666126 1_4:-31737268 None:intergenic
AGATACATATTCATCTATGG+AGG 0.669824 1_4:+31749881 Msa0159980:CDS
TCAACATTGATCATTTCACA+TGG 0.671206 1_4:-31750319 None:intergenic
CAGATGATAACCACGCCTCG+TGG 0.673775 1_4:+31748154 Msa0159980:intron
CTTCCCAGGAGAAGTCTCTG+AGG 0.675866 1_4:-31736954 None:intergenic
TCTGGTCATCGTCAAAGACG+GGG 0.681366 1_4:-31749416 None:intergenic
TACTTGTGGACGTGTGATGG+AGG 0.687419 1_4:+31741000 Msa0159980:CDS
TACTTGTGGACGTGTGATGG+AGG 0.687419 1_4:+31750390 Msa0159980:CDS
AACACTTCTCTGAGCTACCA+GGG 0.697242 1_4:+31739304 Msa0159980:intron
ACTCCACCAAATCTGTGACA+GGG 0.697458 1_4:-31748381 None:intergenic
TTTGGACAATGTAGTGGACA+TGG 0.697724 1_4:-31736258 None:intergenic
GCATCAAAGTGTAAACAAGG+TGG 0.698034 1_4:-31750627 None:intergenic
TCGTTTGGAAAATTGCAGAG+TGG 0.698789 1_4:+31737465 Msa0159980:CDS
ATGTGCATCAAACAACAATG+TGG 0.704575 1_4:+31748185 Msa0159980:CDS
TGTTACAAGACATTAAACAG+TGG 0.717621 1_4:+31737148 Msa0159980:CDS
GTGCAGCAGCAGCATCACGG+TGG 0.719648 1_4:-31750438 None:intergenic
TGTCTCAAACAAGATCCACA+AGG 0.723177 1_4:+31750124 Msa0159980:CDS
GTGCACACCAGACAACAATG+TGG 0.739193 1_4:+31736920 Msa0159980:intron
ATGAGGTTGAAGTCTCAGTG+AGG 0.764223 1_4:-31748297 None:intergenic
GAACTTACGATATACCGACG+AGG 0.806189 1_4:-31737290 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAAAAAGTTCAT+CGG + chr1_4:31736729-31736748 Msa0159980:intron 10.0%
!!! TTTTATTAATTTGTATGAAA+TGG + chr1_4:31736804-31736823 Msa0159980:intron 10.0%
!! TATTATCAGATTATAAAAAA+AGG + chr1_4:31737410-31737429 Msa0159980:CDS 10.0%
!!! TAATTTTCTCAAATTATTAA+TGG - chr1_4:31739115-31739134 None:intergenic 10.0%
!!! TTGTTTTTGTTTTTAATAAA+AGG + chr1_4:31739271-31739290 Msa0159980:intron 10.0%
!!! GTTTTTTTTTTAAAGAATTT+AGG + chr1_4:31739722-31739741 Msa0159980:intron 10.0%
!!! TACTAAAAAAATAACTTTTT+TGG - chr1_4:31741572-31741591 None:intergenic 10.0%
!!! TATTTTTTTAGTAAAATAAG+AGG + chr1_4:31741579-31741598 Msa0159980:intron 10.0%
!! TTCATGAAAATAATAATTTA+AGG + chr1_4:31741904-31741923 Msa0159980:intron 10.0%
!! TCATGAAAATAATAATTTAA+GGG + chr1_4:31741905-31741924 Msa0159980:intron 10.0%
!!! TTTTTTTTTTCTTTTCAAAA+AGG - chr1_4:31742169-31742188 None:intergenic 10.0%
!!! TTTTCGTATAAATTATATTT+TGG - chr1_4:31745522-31745541 None:intergenic 10.0%
!! CAAAAAAAATAAATATCAAT+TGG - chr1_4:31745715-31745734 None:intergenic 10.0%
!! TATTAAAATGTATAAGTGAA+AGG - chr1_4:31736521-31736540 None:intergenic 15.0%
!! AGTATATGAAGAAAAAAATT+GGG - chr1_4:31738532-31738551 None:intergenic 15.0%
!! TAGTATATGAAGAAAAAAAT+TGG - chr1_4:31738533-31738552 None:intergenic 15.0%
!! TAAAAGATAACATAGTAAAA+GGG - chr1_4:31738740-31738759 None:intergenic 15.0%
!! AACTTTAGATTTATGAAATA+CGG + chr1_4:31739049-31739068 Msa0159980:intron 15.0%
!! AAAAAACTGAATTATGATAT+TGG + chr1_4:31739342-31739361 Msa0159980:CDS 15.0%
!!! CATTTAACTTCTTTAAATTT+AGG - chr1_4:31741622-31741641 None:intergenic 15.0%
!! TTAAATGTTAAAACAATTGA+AGG - chr1_4:31741767-31741786 None:intergenic 15.0%
!!! TTGTATTGTTTTATTGTATA+TGG - chr1_4:31742479-31742498 None:intergenic 15.0%
!! AAACAATACAAAATAGTAAA+AGG + chr1_4:31742488-31742507 Msa0159980:intron 15.0%
!!! ATTTTATCATACATTTTTGT+AGG - chr1_4:31743009-31743028 None:intergenic 15.0%
!!! GAAAAGAAAAATTCTAAAAT+CGG + chr1_4:31744542-31744561 Msa0159980:intron 15.0%
!!! AAAAGAAAAATTCTAAAATC+GGG + chr1_4:31744543-31744562 Msa0159980:intron 15.0%
!! TCTCAATTTATGAAAATAAA+TGG - chr1_4:31744820-31744839 None:intergenic 15.0%
!!! ATTTATTTTCATAAATTGAG+AGG + chr1_4:31744819-31744838 Msa0159980:intron 15.0%
!!! ATTATTACTTTGTTATTTCA+AGG - chr1_4:31745259-31745278 None:intergenic 15.0%
!! AATTTATACGAAAAAGATTT+AGG + chr1_4:31745528-31745547 Msa0159980:intron 15.0%
!! ATTTATACGAAAAAGATTTA+GGG + chr1_4:31745529-31745548 Msa0159980:intron 15.0%
!!! TTTTTTTGAAAAAAAATGAC+CGG + chr1_4:31745727-31745746 Msa0159980:intron 15.0%
!!! AATTTTTTAATAATGTATCG+AGG + chr1_4:31746323-31746342 Msa0159980:intron 15.0%
!! TTTATTGATAAGTAACATTA+AGG + chr1_4:31746671-31746690 Msa0159980:intron 15.0%
!! AAAAAGTAAAATCAAATAAC+TGG - chr1_4:31746738-31746757 None:intergenic 15.0%
!! TTATCAGTAAATAAGTAAAT+TGG - chr1_4:31747069-31747088 None:intergenic 15.0%
!! ATATTGATAAATTCAACTTT+AGG - chr1_4:31747095-31747114 None:intergenic 15.0%
!! AATAAAAAATGAACATAAGA+AGG - chr1_4:31747275-31747294 None:intergenic 15.0%
!!! CAAATATAAGTTAAATTTTG+AGG - chr1_4:31747798-31747817 None:intergenic 15.0%
!!! ATTTGCATAATATATGATTT+TGG + chr1_4:31747919-31747938 Msa0159980:intron 15.0%
!!! ATTTTTTTTGTATACATGTT+AGG + chr1_4:31748940-31748959 Msa0159980:intron 15.0%
!!! AAGTTATTTTCAATCATTTT+TGG + chr1_4:31748968-31748987 Msa0159980:intron 15.0%
!! AAGAAATCTATAATATCTTT+AGG - chr1_4:31749079-31749098 None:intergenic 15.0%
!! TATATACATGTAAGTGTAAA+TGG + chr1_4:31737362-31737381 Msa0159980:intron 20.0%
!! TACATAAATAACTACATATG+TGG + chr1_4:31737495-31737514 Msa0159980:intron 20.0%
!! GTGTGTCTATATATATATAT+GGG - chr1_4:31737973-31737992 None:intergenic 20.0%
!! TGTGTGTCTATATATATATA+TGG - chr1_4:31737974-31737993 None:intergenic 20.0%
!!! GTTGACATTCTTTTTATTTT+AGG - chr1_4:31738091-31738110 None:intergenic 20.0%
!! AATCTGAGTACAATTATATT+GGG - chr1_4:31738134-31738153 None:intergenic 20.0%
!! TCTTGTAAATGAATAAAACA+TGG + chr1_4:31738179-31738198 Msa0159980:intron 20.0%
!! CACATGAAAATTAATCTTAA+TGG - chr1_4:31738233-31738252 None:intergenic 20.0%
!! AGTAAATTTCATTAACATGT+CGG - chr1_4:31738288-31738307 None:intergenic 20.0%
!! GAAAATCATATCATTCAAAA+TGG - chr1_4:31738367-31738386 None:intergenic 20.0%
!! GTAAAAGATAACATAGTAAA+AGG - chr1_4:31738741-31738760 None:intergenic 20.0%
!!! ATTATAAAGAAAGCATGAAA+TGG + chr1_4:31738998-31739017 Msa0159980:intron 20.0%
!! TTTAGTGTAAATATATGTGT+CGG + chr1_4:31739140-31739159 Msa0159980:intron 20.0%
!!! TAAATAATTTCCATGCATTT+TGG + chr1_4:31739234-31739253 Msa0159980:intron 20.0%
!!! TTTTAATAAAAGGTATGTGT+TGG + chr1_4:31739281-31739300 Msa0159980:intron 20.0%
!! AAGGAAAATTATCTTTCAAT+GGG + chr1_4:31739422-31739441 Msa0159980:CDS 20.0%
!! TTAGATTAACAAGAGATTTA+TGG - chr1_4:31739668-31739687 None:intergenic 20.0%
!!! TTTTTGTCTTGTCATTTTTT+TGG - chr1_4:31740064-31740083 None:intergenic 20.0%
!! TTAATTGTTCTTATGATTGA+AGG - chr1_4:31740221-31740240 None:intergenic 20.0%
!! ACATCAAACAATAAAAAATG+TGG + chr1_4:31740577-31740596 Msa0159980:intron 20.0%
!! TTAAAGAAGTTAAATGAGAA+AGG + chr1_4:31741626-31741645 Msa0159980:intron 20.0%
!!! CTTAAGATAACTTGTTAAAA+AGG + chr1_4:31741845-31741864 Msa0159980:intron 20.0%
!!! ATTTTATATTATGTTCGAGT+TGG - chr1_4:31741958-31741977 None:intergenic 20.0%
!! CCAAATATCGAAATATATAT+AGG - chr1_4:31742078-31742097 None:intergenic 20.0%
!! CCTATATATATTTCGATATT+TGG + chr1_4:31742075-31742094 Msa0159980:intron 20.0%
!! TATCAGTTTCACAAATAATT+TGG - chr1_4:31742244-31742263 None:intergenic 20.0%
!! CGAATCAATAAAAATTGATT+AGG - chr1_4:31742321-31742340 None:intergenic 20.0%
!!! TTTAAGTTTGACCATTTTTT+AGG - chr1_4:31742395-31742414 None:intergenic 20.0%
!!! TATTATGGATTGTGTATTTA+GGG - chr1_4:31742561-31742580 None:intergenic 20.0%
!!! ATATTATGGATTGTGTATTT+AGG - chr1_4:31742562-31742581 None:intergenic 20.0%
!!! TTAATTTGAGTCAAATTTAG+TGG - chr1_4:31742820-31742839 None:intergenic 20.0%
!! TATGATAAAATTAAAGTGAC+AGG + chr1_4:31743018-31743037 Msa0159980:intron 20.0%
!! GATTATTCAATCAAAGATTT+GGG - chr1_4:31743078-31743097 None:intergenic 20.0%
!! TGATTATTCAATCAAAGATT+TGG - chr1_4:31743079-31743098 None:intergenic 20.0%
!! AATAAGAGTTTCAATACAAT+TGG + chr1_4:31743546-31743565 Msa0159980:intron 20.0%
!! ATAAGAGTTTCAATACAATT+GGG + chr1_4:31743547-31743566 Msa0159980:intron 20.0%
!! TTACACGAATTTAATGTTAT+CGG + chr1_4:31744404-31744423 Msa0159980:intron 20.0%
!!! AAAGAAAAATTCTAAAATCG+GGG + chr1_4:31744544-31744563 Msa0159980:intron 20.0%
!! TTGTATGACATATTTAATGA+TGG + chr1_4:31744746-31744765 Msa0159980:intron 20.0%
!! TGTATGACATATTTAATGAT+GGG + chr1_4:31744747-31744766 Msa0159980:intron 20.0%
!! GTAGATAAAATATTTGCTTT+GGG - chr1_4:31744877-31744896 None:intergenic 20.0%
!! TGTAGATAAAATATTTGCTT+TGG - chr1_4:31744878-31744897 None:intergenic 20.0%
!! TTTAGATCTACAAATACATT+AGG - chr1_4:31744926-31744945 None:intergenic 20.0%
!!! CTAAAACGAATTTTAAATTG+AGG + chr1_4:31744941-31744960 Msa0159980:intron 20.0%
!! TTATTTCAAGGTTTAACAAT+CGG - chr1_4:31745247-31745266 None:intergenic 20.0%
!!! TTTTTTTCCTTTGCATATTT+TGG + chr1_4:31745307-31745326 Msa0159980:intron 20.0%
!! TAGTATAACTTTAAACATGT+TGG - chr1_4:31746618-31746637 None:intergenic 20.0%
!!! AACAATCTTTTACAAAAGTT+TGG + chr1_4:31746779-31746798 Msa0159980:intron 20.0%
!! CATAAAGAGAAAAATATACT+TGG - chr1_4:31746936-31746955 None:intergenic 20.0%
!! ATATAATTCAGTGTAATCAT+AGG + chr1_4:31747398-31747417 Msa0159980:intron 20.0%
!! TAACTAATAAACATATGTAG+TGG - chr1_4:31747593-31747612 None:intergenic 20.0%
!! TTGATAAAAACAAGAGAAAA+CGG + chr1_4:31747763-31747782 Msa0159980:intron 20.0%
!! TGTCTTACATTTATAACTTA+AGG - chr1_4:31748612-31748631 None:intergenic 20.0%
!! AGAACGAAAAATAAACTTAA+CGG - chr1_4:31748642-31748661 None:intergenic 20.0%
!!! TTTTTTTTTGTTCTTGTTTC+AGG + chr1_4:31748814-31748833 Msa0159980:intron 20.0%
!!! TTTTTTTTGTTCTTGTTTCA+GGG + chr1_4:31748815-31748834 Msa0159980:intron 20.0%
!! AAACTAATCAAATCACAAAT+AGG + chr1_4:31748903-31748922 Msa0159980:CDS 20.0%
!!! ATCTATAATATCTTTAGGAT+TGG - chr1_4:31749074-31749093 None:intergenic 20.0%
!! ATTCTTCAAAGAATCAAATT+TGG - chr1_4:31749445-31749464 None:intergenic 20.0%
!!! AATGTTGATAACAATATCAA+TGG + chr1_4:31750334-31750353 Msa0159980:CDS 20.0%
! TTAATATCCTCAAGCTTAAA+GGG - chr1_4:31736356-31736375 None:intergenic 25.0%
! ATTAATATCCTCAAGCTTAA+AGG - chr1_4:31736357-31736376 None:intergenic 25.0%
! AGATAATGAGGAATATGATA+AGG + chr1_4:31736409-31736428 Msa0159980:CDS 25.0%
!! AAAAAGTTCATCGGTTAATA+AGG + chr1_4:31736738-31736757 Msa0159980:intron 25.0%
! GTGCAATTATGTATCTTAAT+AGG + chr1_4:31737019-31737038 Msa0159980:CDS 25.0%
! ATGTATATACGATATAGTGA+CGG - chr1_4:31737351-31737370 None:intergenic 25.0%
!!! AATGGTTCTTTTTTTCTTGT+AGG + chr1_4:31737380-31737399 Msa0159980:intron 25.0%
!!! ATGGTTCTTTTTTTCTTGTA+GGG + chr1_4:31737381-31737400 Msa0159980:intron 25.0%
!! ATATTGTTTCCAATTTTTGC+AGG + chr1_4:31737580-31737599 Msa0159980:intron 25.0%
!! TATTGTTTCCAATTTTTGCA+GGG + chr1_4:31737581-31737600 Msa0159980:intron 25.0%
! CAAATACCACCAATATTTAT+AGG + chr1_4:31737700-31737719 Msa0159980:CDS 25.0%
!!! GAAGGGTATTATAATTTGTA+CGG + chr1_4:31737903-31737922 Msa0159980:intron 25.0%
!!! GTTTTCGTGATTATTTTTCT+CGG + chr1_4:31737933-31737952 Msa0159980:intron 25.0%
!!! TTTTCGTGATTATTTTTCTC+GGG + chr1_4:31737934-31737953 Msa0159980:intron 25.0%
! TGGGATCACTATAAAAAAAA+TGG - chr1_4:31738115-31738134 None:intergenic 25.0%
! GAATCTGAGTACAATTATAT+TGG - chr1_4:31738135-31738154 None:intergenic 25.0%
! TAAATTTCATTAACATGTCG+GGG - chr1_4:31738286-31738305 None:intergenic 25.0%
! GTAAATTTCATTAACATGTC+GGG - chr1_4:31738287-31738306 None:intergenic 25.0%
! CAAAATGGAAAACAAAAATC+TGG - chr1_4:31738352-31738371 None:intergenic 25.0%
!! ATGTATTCATGTGTTTTACA+AGG - chr1_4:31738433-31738452 None:intergenic 25.0%
! TTGTTTCATGTATTCTTACT+TGG + chr1_4:31738595-31738614 Msa0159980:intron 25.0%
! TGTATTCTTACTTGGTAAAA+AGG + chr1_4:31738603-31738622 Msa0159980:intron 25.0%
!!! AATTTTTTTTTTCCCAACAC+AGG + chr1_4:31738765-31738784 Msa0159980:intron 25.0%
!!! ATTTTTTTTTTCCCAACACA+GGG + chr1_4:31738766-31738785 Msa0159980:intron 25.0%
! TCTCAAATTATTAATGGTGT+TGG - chr1_4:31739109-31739128 None:intergenic 25.0%
! ATTGTTAATACCAAAATGCA+TGG - chr1_4:31739247-31739266 None:intergenic 25.0%
! AAACTGAATTATGATATTGG+TGG + chr1_4:31739345-31739364 Msa0159980:CDS 25.0%
! TTATAATGAATGAGAATGCA+AGG + chr1_4:31739403-31739422 Msa0159980:CDS 25.0%
! CAAGGAAAATTATCTTTCAA+TGG + chr1_4:31739421-31739440 Msa0159980:CDS 25.0%
! AGGAAAATTATCTTTCAATG+GGG + chr1_4:31739423-31739442 Msa0159980:CDS 25.0%
! GAAAGTAGATATCAATATTG+AGG + chr1_4:31739524-31739543 Msa0159980:CDS 25.0%
! TTAAAAATGTGTCTGTAGTT+TGG - chr1_4:31739555-31739574 None:intergenic 25.0%
! TAGTGAATAGTAGAAAAGAA+AGG - chr1_4:31739585-31739604 None:intergenic 25.0%
! AAATGATCCACAATATTAGA+TGG + chr1_4:31739997-31740016 Msa0159980:intron 25.0%
! GTAGAGATATTTAACATGAT+AGG - chr1_4:31740268-31740287 None:intergenic 25.0%
! TGAAAAGTGGAAAAATAATG+TGG + chr1_4:31740850-31740869 Msa0159980:intron 25.0%
!!! AATGGGTTGAAACTAAATAA+TGG + chr1_4:31741261-31741280 Msa0159980:intron 25.0%
! AAAATGTTTCCAAAGAAGAA+AGG + chr1_4:31741483-31741502 Msa0159980:intron 25.0%
! ATAATTTAAGGGACCAATTA+AGG + chr1_4:31741916-31741935 Msa0159980:intron 25.0%
! GGTTTATTATCATCCTTAAT+TGG - chr1_4:31741932-31741951 None:intergenic 25.0%
!!! TAGTTCAAGTTTAACTTGTT+TGG - chr1_4:31742019-31742038 None:intergenic 25.0%
!!! TCAATTTTTATTGATTCGAG+TGG + chr1_4:31742323-31742342 Msa0159980:intron 25.0%
! TTAAGACCAATCCTAAAAAA+TGG + chr1_4:31742381-31742400 Msa0159980:intron 25.0%
! CAAACTTAAAAACCACAAAT+AGG + chr1_4:31742405-31742424 Msa0159980:intron 25.0%
! AAAGGAAAAATTCCTATTTG+TGG - chr1_4:31742420-31742439 None:intergenic 25.0%
! ACGAGTATCTATTTGTAAAA+AGG - chr1_4:31742438-31742457 None:intergenic 25.0%
!! TGTGATTTTCTACTGAAATT+GGG - chr1_4:31742538-31742557 None:intergenic 25.0%
! GACGATTGAAATGAAAAAAA+AGG - chr1_4:31742609-31742628 None:intergenic 25.0%
!! CGTCTATCCAAATAATTTTA+TGG + chr1_4:31742625-31742644 Msa0159980:intron 25.0%
! AAGCAAAGAACAATTATTAG+TGG - chr1_4:31742654-31742673 None:intergenic 25.0%
! TCCAAGTTAATAGCATATAA+CGG + chr1_4:31742976-31742995 Msa0159980:intron 25.0%
!! CCTTTAAAAAAAAGATTCAG+AGG - chr1_4:31743500-31743519 None:intergenic 25.0%
!!! CCTCTGAATCTTTTTTTTAA+AGG + chr1_4:31743497-31743516 Msa0159980:intron 25.0%
!! TGAAACTTTAGGTTTACATT+TGG - chr1_4:31743830-31743849 None:intergenic 25.0%
! TACATATCCTTGTATTGTTT+CGG - chr1_4:31743863-31743882 None:intergenic 25.0%
! ATATAAATGCAACATCAATG+CGG - chr1_4:31743968-31743987 None:intergenic 25.0%
! TGCTATATCTACTATTGTTT+CGG - chr1_4:31744290-31744309 None:intergenic 25.0%
! ATCTCTCTAAATGAAACAAA+TGG - chr1_4:31744695-31744714 None:intergenic 25.0%
! GATAGACACAAAAAAATAGA+TGG - chr1_4:31744778-31744797 None:intergenic 25.0%
!!! AAATTGAGGTCTCTTTTTTT+TGG + chr1_4:31744955-31744974 Msa0159980:intron 25.0%
!!! AAAAAAGTTCTAGCATTGAT+GGG - chr1_4:31745154-31745173 None:intergenic 25.0%
!! TAAAAAAGTTCTAGCATTGA+TGG - chr1_4:31745155-31745174 None:intergenic 25.0%
!! ATGAATATGATGTCAGTTTT+TGG - chr1_4:31745360-31745379 None:intergenic 25.0%
! CATAAATGTAGCTATTTGTT+TGG - chr1_4:31745421-31745440 None:intergenic 25.0%
!!! TTCACCATTTTTGAAGTATT+GGG - chr1_4:31745619-31745638 None:intergenic 25.0%
!! AATATGTAAGACAGAAGTAT+CGG - chr1_4:31745787-31745806 None:intergenic 25.0%
! AGAGAGAAGAAGATATTAAT+GGG - chr1_4:31746043-31746062 None:intergenic 25.0%
! TAGAGAGAAGAAGATATTAA+TGG - chr1_4:31746044-31746063 None:intergenic 25.0%
! AATATCTTCTTCTCTCTAAT+TGG + chr1_4:31746046-31746065 Msa0159980:intron 25.0%
! ATATCTTCTTCTCTCTAATT+GGG + chr1_4:31746047-31746066 Msa0159980:intron 25.0%
! TATACGATACGATATTGATA+CGG - chr1_4:31746420-31746439 None:intergenic 25.0%
! TTTCGTCTGATATATTATTC+TGG + chr1_4:31746541-31746560 Msa0159980:intron 25.0%
! ATATATCATTGTTCTTTCCT+TGG + chr1_4:31746695-31746714 Msa0159980:intron 25.0%
!!! ACTTTTTCCTATTATAACAG+TGG + chr1_4:31746751-31746770 Msa0159980:intron 25.0%
! TTTCATTCCACTGTTATAAT+AGG - chr1_4:31746761-31746780 None:intergenic 25.0%
!! ATATCAATGTCTTTTTGCTT+GGG - chr1_4:31746811-31746830 None:intergenic 25.0%
! TTTAGAGGCTATAAATATGT+GGG + chr1_4:31747017-31747036 Msa0159980:intron 25.0%
! TAATGATTTCCTATAAAGCA+CGG + chr1_4:31747326-31747345 Msa0159980:intron 25.0%
! ATATAAGTACATTGAGAAAG+TGG - chr1_4:31747540-31747559 None:intergenic 25.0%
!!! TGATTTTAAGTATAAGTCTG+CGG - chr1_4:31747650-31747669 None:intergenic 25.0%
! TTGTCAGGTTAATTATTTGA+TGG + chr1_4:31748043-31748062 Msa0159980:intron 25.0%
!!! TCTGTTTTGAATTTGATTCA+GGG - chr1_4:31748350-31748369 None:intergenic 25.0%
!!! TTCTGTTTTGAATTTGATTC+AGG - chr1_4:31748351-31748370 None:intergenic 25.0%
! TATAACTTAAGGAACCAAAA+TGG - chr1_4:31748601-31748620 None:intergenic 25.0%
! GTTATAAATGTAAGACACTT+AGG + chr1_4:31748615-31748634 Msa0159980:intron 25.0%
!!! TTTTGTTGATTCTAAGTTGA+AGG + chr1_4:31748872-31748891 Msa0159980:CDS 25.0%
! GAATCTGCAACAAATATATA+TGG - chr1_4:31749016-31749035 None:intergenic 25.0%
! GATAATCTCCTAATATATGA+TGG + chr1_4:31749124-31749143 Msa0159980:CDS 25.0%
! GTTTGATACATGAAAACAAA+AGG - chr1_4:31749230-31749249 None:intergenic 25.0%
!!! TTTGTTTTCATGTATCAAAC+AGG + chr1_4:31749230-31749249 Msa0159980:intron 25.0%
! CATTCATTATTTCACCTAAA+GGG - chr1_4:31749572-31749591 None:intergenic 25.0%
! TCATTCATTATTTCACCTAA+AGG - chr1_4:31749573-31749592 None:intergenic 25.0%
!! AATAATGAATGATGATGCAA+TGG + chr1_4:31749581-31749600 Msa0159980:CDS 25.0%
!!! AATGGACTTGATTTTTCAAT+GGG + chr1_4:31749599-31749618 Msa0159980:CDS 25.0%
! GTTATGATCTTACTCAAAAA+TGG + chr1_4:31749655-31749674 Msa0159980:CDS 25.0%
! TATAATAGAACACTATCACT+TGG + chr1_4:31749985-31750004 Msa0159980:CDS 25.0%
! ATAATAGAACACTATCACTT+GGG + chr1_4:31749986-31750005 Msa0159980:CDS 25.0%
!!! CTTTGGTTGATTTTGATATA+TGG + chr1_4:31750212-31750231 Msa0159980:CDS 25.0%
!!! AAGTTTGCTATAGCTTAATT+TGG + chr1_4:31750507-31750526 Msa0159980:three_prime_UTR 25.0%
!!! AGTTTGCTATAGCTTAATTT+GGG + chr1_4:31750508-31750527 Msa0159980:three_prime_UTR 25.0%
TTCCTCATTATCTTTGACAT+GGG - chr1_4:31736402-31736421 None:intergenic 30.0%
ATTCCTCATTATCTTTGACA+TGG - chr1_4:31736403-31736422 None:intergenic 30.0%
TGTTACAAGACATTAAACAG+TGG + chr1_4:31737148-31737167 Msa0159980:CDS 30.0%
GTTACAAGACATTAAACAGT+GGG + chr1_4:31737149-31737168 Msa0159980:CDS 30.0%
TTGTTGCCTATAAATATTGG+TGG - chr1_4:31737709-31737728 None:intergenic 30.0%
TGGTTGTTGCCTATAAATAT+TGG - chr1_4:31737712-31737731 None:intergenic 30.0%
! GGTATTATAATTTGTACGGT+CGG + chr1_4:31737907-31737926 Msa0159980:intron 30.0%
! GTATTATAATTTGTACGGTC+GGG + chr1_4:31737908-31737927 Msa0159980:intron 30.0%
GTACTCAGATTCTTTAAGTA+AGG + chr1_4:31738143-31738162 Msa0159980:intron 30.0%
TTACTAAATGATTACCATGC+AGG + chr1_4:31738456-31738475 Msa0159980:intron 30.0%
TACTAAATGATTACCATGCA+GGG + chr1_4:31738457-31738476 Msa0159980:intron 30.0%
AATTGGGTAATAATCTAGTG+TGG - chr1_4:31738516-31738535 None:intergenic 30.0%
TTAAAGCACAAGAGCAAAAA+TGG - chr1_4:31738640-31738659 None:intergenic 30.0%
! GTGCTTTAAGTGTAACTAAT+TGG + chr1_4:31738651-31738670 Msa0159980:intron 30.0%
AAGATAACATAGTAAAAGGG+CGG - chr1_4:31738737-31738756 None:intergenic 30.0%
AAACCACAAGAAGTGAAAAA+AGG + chr1_4:31738895-31738914 Msa0159980:intron 30.0%
!!! AAACCTTTTTTCACTTCTTG+TGG - chr1_4:31738901-31738920 None:intergenic 30.0%
GAAAAAAGGTTTCAAGAAAG+AGG + chr1_4:31738909-31738928 Msa0159980:intron 30.0%
! AAGAGGATTTCAAGATTTTG+TGG + chr1_4:31738926-31738945 Msa0159980:intron 30.0%
ATGAAATACGGATACAAAGA+CGG + chr1_4:31739061-31739080 Msa0159980:intron 30.0%
CATTCATTATAACACCTTGA+GGG - chr1_4:31739395-31739414 None:intergenic 30.0%
TCATTCATTATAACACCTTG+AGG - chr1_4:31739396-31739415 None:intergenic 30.0%
TGAAGATATCTCCAAGAAAT+GGG + chr1_4:31739479-31739498 Msa0159980:CDS 30.0%
!! TGAACTCTTGTTGTACTTTT+CGG - chr1_4:31739835-31739854 None:intergenic 30.0%
GTTTACTCCATCTAATATTG+TGG - chr1_4:31740007-31740026 None:intergenic 30.0%
TTCTTATGATTGAAGGTTTC+CGG - chr1_4:31740214-31740233 None:intergenic 30.0%
TATGATGTTACCTATGATTC+AGG + chr1_4:31740363-31740382 Msa0159980:intron 30.0%
ATGATGTTACCTATGATTCA+GGG + chr1_4:31740364-31740383 Msa0159980:intron 30.0%
! CAATTGCTCTTTTGAATTCT+TGG - chr1_4:31740544-31740563 None:intergenic 30.0%
CAAGAATTCAAAAGAGCAAT+TGG + chr1_4:31740542-31740561 Msa0159980:intron 30.0%
! AAAAGTATGGAATCTTTGTC+GGG - chr1_4:31740640-31740659 None:intergenic 30.0%
! CAAAAGTATGGAATCTTTGT+CGG - chr1_4:31740641-31740660 None:intergenic 30.0%
! AAAGATTCCATACTTTTGGA+TGG + chr1_4:31740643-31740662 Msa0159980:intron 30.0%
! AAGATTCCATACTTTTGGAT+GGG + chr1_4:31740644-31740663 Msa0159980:intron 30.0%
CAAAACAAAACATGCAAAGA+CGG + chr1_4:31740686-31740705 Msa0159980:intron 30.0%
TCAACAACAGTTTGTAACAT+AGG - chr1_4:31740827-31740846 None:intergenic 30.0%
!!! CTGTTGTTGATTTTGAAAAG+TGG + chr1_4:31740837-31740856 Msa0159980:intron 30.0%
TGTTGAAGGAGAATTAATCA+TGG + chr1_4:31741086-31741105 Msa0159980:intron 30.0%
! ATGCATATGTATGTGTGTTT+TGG + chr1_4:31741189-31741208 Msa0159980:intron 30.0%
! AGATTTTGAACTTTGAACTC+TGG + chr1_4:31741432-31741451 Msa0159980:intron 30.0%
ACATGTATACCTTTCTTCTT+TGG - chr1_4:31741495-31741514 None:intergenic 30.0%
! ACTTGTTAAAAAGGCTAACA+AGG + chr1_4:31741854-31741873 Msa0159980:intron 30.0%
!!! GTTTGACCATTTTTTAGGAT+TGG - chr1_4:31742390-31742409 None:intergenic 30.0%
! TGATTTTCTACTGAAATTGG+GGG - chr1_4:31742536-31742555 None:intergenic 30.0%
! GTGATTTTCTACTGAAATTG+GGG - chr1_4:31742537-31742556 None:intergenic 30.0%
! GTGTGATTTTCTACTGAAAT+TGG - chr1_4:31742539-31742558 None:intergenic 30.0%
! AACTCTGTTTTCATCATACA+TGG - chr1_4:31742712-31742731 None:intergenic 30.0%
CTCTCTTACAACATTTACTT+TGG - chr1_4:31742778-31742797 None:intergenic 30.0%
! TTGAGTCAAATTTAGTGGAT+TGG - chr1_4:31742815-31742834 None:intergenic 30.0%
! AGTGATTTTCACATAGATCT+AGG - chr1_4:31743216-31743235 None:intergenic 30.0%
ATAGTGAGAAAAAGATGAAG+AGG + chr1_4:31743249-31743268 Msa0159980:intron 30.0%
TAGTGAGAAAAAGATGAAGA+GGG + chr1_4:31743250-31743269 Msa0159980:intron 30.0%
TCTTTCAGTTTCTTCATTGA+GGG - chr1_4:31743310-31743329 None:intergenic 30.0%
TCTTACATTTCTTGTATACG+TGG + chr1_4:31743472-31743491 Msa0159980:intron 30.0%
ACATGCTTATAGCATTTCAT+TGG + chr1_4:31743522-31743541 Msa0159980:intron 30.0%
GGGTATATCATAATAAACAG+CGG + chr1_4:31743567-31743586 Msa0159980:intron 30.0%
GGTATATCATAATAAACAGC+GGG + chr1_4:31743568-31743587 Msa0159980:intron 30.0%
! CTCTTTCTTTTCTAACTCTA+GGG - chr1_4:31743665-31743684 None:intergenic 30.0%
CAAACGACAAGATGAAATAA+TGG + chr1_4:31743693-31743712 Msa0159980:intron 30.0%
!! GTTTACATTTGGCTTTACAA+TGG - chr1_4:31743819-31743838 None:intergenic 30.0%
ACAAGGATATGTAATAGTCT+TGG + chr1_4:31743870-31743889 Msa0159980:intron 30.0%
CATTTCAATCATACAGGTAT+TGG - chr1_4:31743934-31743953 None:intergenic 30.0%
!! TTTCAGCTAGAGTTATTTTG+TGG - chr1_4:31744585-31744604 None:intergenic 30.0%
GACACAAAAAAATAGATGGT+GGG - chr1_4:31744774-31744793 None:intergenic 30.0%
AGACACAAAAAAATAGATGG+TGG - chr1_4:31744775-31744794 None:intergenic 30.0%
TGTGTCTATCTCTTTCATAA+TGG + chr1_4:31744788-31744807 Msa0159980:intron 30.0%
! ACAATTGATTCATCATGTTG+TGG + chr1_4:31745100-31745119 Msa0159980:intron 30.0%
! CAATTGATTCATCATGTTGT+GGG + chr1_4:31745101-31745120 Msa0159980:intron 30.0%
!! AAAAAGTTCTAGCATTGATG+GGG - chr1_4:31745153-31745172 None:intergenic 30.0%
CTACAACTATCAATCAAGTT+AGG + chr1_4:31745468-31745487 Msa0159980:intron 30.0%
!!! AGTTTTTTAGGCCAAATATC+AGG - chr1_4:31745556-31745575 None:intergenic 30.0%
GATATTTGGCCTAAAAAACT+TGG + chr1_4:31745556-31745575 Msa0159980:intron 30.0%
!!! TCACCATTTTTGAAGTATTG+GGG - chr1_4:31745618-31745637 None:intergenic 30.0%
!!! CTTCACCATTTTTGAAGTAT+TGG - chr1_4:31745620-31745639 None:intergenic 30.0%
CTCTTCTAACACAGAAAAAT+AGG + chr1_4:31745860-31745879 Msa0159980:intron 30.0%
ATTGAGTTAATCGGTTGTAA+TGG - chr1_4:31745927-31745946 None:intergenic 30.0%
GATGTTGAGATTGAGTTAAT+CGG - chr1_4:31745936-31745955 None:intergenic 30.0%
GATACGATATGATATCGATA+CGG - chr1_4:31746388-31746407 None:intergenic 30.0%
! AGAAAAATGTTTTGTCTCCA+AGG - chr1_4:31746715-31746734 None:intergenic 30.0%
! GATATCAATGTCTTTTTGCT+TGG - chr1_4:31746812-31746831 None:intergenic 30.0%
TTGTGAAAATCATATCAGAG+TGG + chr1_4:31746873-31746892 Msa0159980:intron 30.0%
! TATACTTGGTAGCTTCTAAT+GGG - chr1_4:31746922-31746941 None:intergenic 30.0%
! ATATACTTGGTAGCTTCTAA+TGG - chr1_4:31746923-31746942 None:intergenic 30.0%
AAGTCATAAGAGTTTACACT+TGG - chr1_4:31746999-31747018 None:intergenic 30.0%
GTAAACTCTTATGACTTTAG+AGG + chr1_4:31747002-31747021 Msa0159980:intron 30.0%
! CTTTAGAGGCTATAAATATG+TGG + chr1_4:31747016-31747035 Msa0159980:intron 30.0%
ATCAATATGTCATTGTCCAA+TGG + chr1_4:31747107-31747126 Msa0159980:intron 30.0%
TTCTGTCCAATGTTATACTT+AGG + chr1_4:31747240-31747259 Msa0159980:intron 30.0%
TCTGTCCAATGTTATACTTA+GGG + chr1_4:31747241-31747260 Msa0159980:intron 30.0%
GTTTACCCTAAGTATAACAT+TGG - chr1_4:31747249-31747268 None:intergenic 30.0%
!! GATTTTAAGTATAAGTCTGC+GGG - chr1_4:31747649-31747668 None:intergenic 30.0%
!!! TCTACTTTTGGGATTAAAGT+TGG - chr1_4:31747688-31747707 None:intergenic 30.0%
!! GATCGTAAACTTCTACTTTT+GGG - chr1_4:31747699-31747718 None:intergenic 30.0%
TCTTAGACATTACGACAATA+AGG - chr1_4:31747721-31747740 None:intergenic 30.0%
TTATCAAACTGACATCGATA+AGG - chr1_4:31747750-31747769 None:intergenic 30.0%
! GTGTAGGTTTGAAATAAACA+GGG - chr1_4:31747825-31747844 None:intergenic 30.0%
TGTTTATTTCAAACCTACAC+CGG + chr1_4:31747825-31747844 Msa0159980:intron 30.0%
!! TGGAGCACTAACATTTTTAT+TGG + chr1_4:31747939-31747958 Msa0159980:intron 30.0%
TTATCCAATAAACAGCAACA+GGG - chr1_4:31748510-31748529 None:intergenic 30.0%
ATTATCCAATAAACAGCAAC+AGG - chr1_4:31748511-31748530 None:intergenic 30.0%
! ATCTTCTTTTCGTTCCATTT+TGG + chr1_4:31748584-31748603 Msa0159980:intron 30.0%
!!! AGTACTAACCGTTTTGTTTT+TGG - chr1_4:31749155-31749174 None:intergenic 30.0%
! AAGAGGATTTCAAGATTTTG+TGG + chr1_4:31738926-31738945 Msa0159980:intron 30.0%
! AAGAATCAAATTTGGTCTTC+TGG - chr1_4:31749437-31749456 None:intergenic 30.0%
! TAAGATCAGATTTTATGCAG+TGG + chr1_4:31749464-31749483 Msa0159980:CDS 30.0%
!!! TAAGAGAGCATTTGAACTTT+TGG + chr1_4:31749520-31749539 Msa0159980:CDS 30.0%
!!! AAGAGAGCATTTGAACTTTT+GGG + chr1_4:31749521-31749540 Msa0159980:CDS 30.0%
!! CAATGGACTTGATTTTTCAA+TGG + chr1_4:31749598-31749617 Msa0159980:CDS 30.0%
!! ATGGACTTGATTTTTCAATG+GGG + chr1_4:31749600-31749619 Msa0159980:CDS 30.0%
! AACCATCTTGTTTCCTAAAA+GGG - chr1_4:31749638-31749657 None:intergenic 30.0%
! TAACCATCTTGTTTCCTAAA+AGG - chr1_4:31749639-31749658 None:intergenic 30.0%
ATCTTACTCAAAAATGGAAG+TGG + chr1_4:31749661-31749680 Msa0159980:CDS 30.0%
! TCAAAAATGGAAGTGGTTTT+GGG + chr1_4:31749668-31749687 Msa0159980:CDS 30.0%
! TGTTTTCTATGTGAGTTACT+AGG + chr1_4:31749847-31749866 Msa0159980:intron 30.0%
GACAGATACATATTCATCTA+TGG + chr1_4:31749878-31749897 Msa0159980:CDS 30.0%
AGATACATATTCATCTATGG+AGG + chr1_4:31749881-31749900 Msa0159980:CDS 30.0%
!!! TTTTGTTTTCTCCAATGCTA+AGG - chr1_4:31749936-31749955 None:intergenic 30.0%
! TAGCATTGGAGAAAACAAAA+AGG + chr1_4:31749936-31749955 Msa0159980:CDS 30.0%
! AAAGGCATGAAACTATCTTA+AGG + chr1_4:31749954-31749973 Msa0159980:CDS 30.0%
AAGGCATGAAACTATCTTAA+GGG + chr1_4:31749955-31749974 Msa0159980:CDS 30.0%
AAAAACGAGGAACAATCTTA+GGG - chr1_4:31750021-31750040 None:intergenic 30.0%
TCTATTTCAATCCAAAAACG+AGG - chr1_4:31750034-31750053 None:intergenic 30.0%
! GCTACAATGTTAAGCTTTTA+GGG + chr1_4:31750167-31750186 Msa0159980:CDS 30.0%
! ATAGAGTGCTACAAAAAGAA+GGG + chr1_4:31750239-31750258 Msa0159980:CDS 30.0%
TCAACATTGATCATTTCACA+TGG - chr1_4:31750322-31750341 None:intergenic 30.0%
TTGTTTACACTTTGATGCAA+GGG + chr1_4:31750632-31750651 Msa0159980:three_prime_UTR 30.0%
CAAGGGTGGAAAATAAATTA+TGG + chr1_4:31750649-31750668 Msa0159980:three_prime_UTR 30.0%
TACATCTTTGGACAATGTAG+TGG - chr1_4:31736267-31736286 None:intergenic 35.0%
GGGTGAGATAAACTTTGTTA+AGG - chr1_4:31736382-31736401 None:intergenic 35.0%
GATACACGAAAGAAACAAGA+TGG - chr1_4:31736781-31736800 None:intergenic 35.0%
ATTCAATCATCAGACACACT+TGG + chr1_4:31737042-31737061 Msa0159980:CDS 35.0%
TAGCCAAGTTCAATTCAGAA+AGG + chr1_4:31737083-31737102 Msa0159980:CDS 35.0%
GAACCTTTCTGAATTGAACT+TGG - chr1_4:31737089-31737108 None:intergenic 35.0%
ACAAGATCAGTTATATCAGC+AGG - chr1_4:31737111-31737130 None:intergenic 35.0%
TGATCTTGTCACATGCTTAT+TGG + chr1_4:31737122-31737141 Msa0159980:CDS 35.0%
TAAAAAAAGGCTCTCTCATG+TGG + chr1_4:31737423-31737442 Msa0159980:CDS 35.0%
GAAAATTGCAGAGTGGAAAT+TGG + chr1_4:31737472-31737491 Msa0159980:CDS 35.0%
TGTACATTCCCTGCAAAAAT+TGG - chr1_4:31737592-31737611 None:intergenic 35.0%
TCTAACGGTTACAATCTTTC+TGG - chr1_4:31737836-31737855 None:intergenic 35.0%
TGTGTAAAGGCAACATCTAA+CGG - chr1_4:31737851-31737870 None:intergenic 35.0%
GCCTTTACACAATACATGAA+TGG + chr1_4:31737860-31737879 Msa0159980:intron 35.0%
GCCATTCATGTATTGTGTAA+AGG - chr1_4:31737864-31737883 None:intergenic 35.0%
TTACACAATACATGAATGGC+TGG + chr1_4:31737864-31737883 Msa0159980:intron 35.0%
GAATAAAACATGGTTGTGAG+TGG + chr1_4:31738189-31738208 Msa0159980:intron 35.0%
ACTAAATGATTACCATGCAG+GGG + chr1_4:31738458-31738477 Msa0159980:intron 35.0%
TTTAGTCACACCAATATCGA+TGG + chr1_4:31738704-31738723 Msa0159980:intron 35.0%
!! ATTTCGAGTTTAGACAGCAT+TGG + chr1_4:31738826-31738845 Msa0159980:intron 35.0%
GATTCCCATTGTGGATAAAT+GGG + chr1_4:31738948-31738967 Msa0159980:intron 35.0%
TCATCCCATTTATCCACAAT+GGG - chr1_4:31738955-31738974 None:intergenic 35.0%
TTCATCCCATTTATCCACAA+TGG - chr1_4:31738956-31738975 None:intergenic 35.0%
TCATTGAATTAGACGTGTTC+CGG - chr1_4:31739182-31739201 None:intergenic 35.0%
! GAATCGATGCTTTTCCTTTT+GGG + chr1_4:31739445-31739464 Msa0159980:CDS 35.0%
TCAGCATCATTTATCCCAAA+AGG - chr1_4:31739462-31739481 None:intergenic 35.0%
CTGAAGATATCTCCAAGAAA+TGG + chr1_4:31739478-31739497 Msa0159980:CDS 35.0%
ATATCTCCAAGAAATGGGAA+TGG + chr1_4:31739484-31739503 Msa0159980:CDS 35.0%
! TACTTTTCGGTTGTCTTAGA+TGG - chr1_4:31739822-31739841 None:intergenic 35.0%
TCAAAACCCATTCTTATGTG+CGG - chr1_4:31739886-31739905 None:intergenic 35.0%
TATCTGTTTGGTACTTCTTC+CGG - chr1_4:31739976-31739995 None:intergenic 35.0%
GTGGATCATTTCTATCTGTT+TGG - chr1_4:31739988-31740007 None:intergenic 35.0%
TATGGTAGTTGGTTAGGAAT+TGG - chr1_4:31740036-31740055 None:intergenic 35.0%
!!! GTCATTTTTTTGGCCAGTTA+TGG - chr1_4:31740054-31740073 None:intergenic 35.0%
!! TAGAGGCATTATTACTTCTG+AGG - chr1_4:31740137-31740156 None:intergenic 35.0%
TCTTATGATTGAAGGTTTCC+GGG - chr1_4:31740213-31740232 None:intergenic 35.0%
TATGATTCAGGGCATGAAAT+GGG + chr1_4:31740375-31740394 Msa0159980:intron 35.0%
! CGACAAAGATTCCATACTTT+TGG + chr1_4:31740639-31740658 Msa0159980:intron 35.0%
TCTATACCCATCCAAAAGTA+TGG - chr1_4:31740653-31740672 None:intergenic 35.0%
! TACTTTTGGATGGGTATAGA+TGG + chr1_4:31740653-31740672 Msa0159980:intron 35.0%
!! CATGTTACACTTTTTGGTCA+CGG + chr1_4:31740797-31740816 Msa0159980:intron 35.0%
!! AAGCTTTGATGAAGCTTTTC+AGG + chr1_4:31740883-31740902 Msa0159980:CDS 35.0%
AACTATTTGGATCATCACGA+TGG - chr1_4:31741051-31741070 None:intergenic 35.0%
ATTCAGATGCAGCAACTATT+TGG - chr1_4:31741064-31741083 None:intergenic 35.0%
CTGCATCTGAATTATGTTGA+AGG + chr1_4:31741072-31741091 Msa0159980:intron 35.0%
ATTCAACAAGTGGAACAAAC+TGG - chr1_4:31741244-31741263 None:intergenic 35.0%
! AGTTTGTTCCACTTGTTGAA+TGG + chr1_4:31741243-31741262 Msa0159980:intron 35.0%
! GTTTGTTCCACTTGTTGAAT+GGG + chr1_4:31741244-31741263 Msa0159980:intron 35.0%
!! TTGAAGGTCTTGTTCAAACA+TGG - chr1_4:31741751-31741770 None:intergenic 35.0%
!! ATATTATGTTCGAGTTGGCT+CGG - chr1_4:31741953-31741972 None:intergenic 35.0%
! TGTTTATCTTTTGTACGCTC+TGG + chr1_4:31742137-31742156 Msa0159980:intron 35.0%
CCAGAGCTGTCTTTATATTA+TGG - chr1_4:31742576-31742595 None:intergenic 35.0%
CCATAATATAAAGACAGCTC+TGG + chr1_4:31742573-31742592 Msa0159980:intron 35.0%
GTGGCTGCCATAAAATTATT+TGG - chr1_4:31742635-31742654 None:intergenic 35.0%
GAAAACAGAGTTCTTGAGTA+AGG + chr1_4:31742720-31742739 Msa0159980:intron 35.0%
! TTCTTTTCTGCATGTACGAA+TGG - chr1_4:31742750-31742769 None:intergenic 35.0%
TCAACACTGCTAAAACGTAA+AGG + chr1_4:31742927-31742946 Msa0159980:intron 35.0%
GCCGTTATATGCTATTAACT+TGG - chr1_4:31742980-31742999 None:intergenic 35.0%
TAAAGTGACAGGAATATCCA+TGG + chr1_4:31743029-31743048 Msa0159980:intron 35.0%
ATTTCATCATCTAAGTGTGG+TGG - chr1_4:31743180-31743199 None:intergenic 35.0%
GTGATTTCATCATCTAAGTG+TGG - chr1_4:31743183-31743202 None:intergenic 35.0%
AGTGAGAAAAAGATGAAGAG+GGG + chr1_4:31743251-31743270 Msa0159980:intron 35.0%
!! TTTTGGGTCAATTTTTGACC+TGG - chr1_4:31743283-31743302 None:intergenic 35.0%
CTTTCAGTTTCTTCATTGAG+GGG - chr1_4:31743309-31743328 None:intergenic 35.0%
CTCTTTCAGTTTCTTCATTG+AGG - chr1_4:31743311-31743330 None:intergenic 35.0%
!! TTTCTTTTCTAACTCTAGGG+TGG - chr1_4:31743662-31743681 None:intergenic 35.0%
! GCTCTTTCTTTTCTAACTCT+AGG - chr1_4:31743666-31743685 None:intergenic 35.0%
! GTTGATGTTGGTGAAACTTT+AGG - chr1_4:31743841-31743860 None:intergenic 35.0%
! TGTATTGTTTCGGTTGATGT+TGG - chr1_4:31743853-31743872 None:intergenic 35.0%
ACATCAACCGAAACAATACA+AGG + chr1_4:31743853-31743872 Msa0159980:intron 35.0%
ATTTGTGTTCGTGATTCAGA+CGG - chr1_4:31743910-31743929 None:intergenic 35.0%
ACCTGTATGATTGAAATGAG+AGG + chr1_4:31743936-31743955 Msa0159980:intron 35.0%
TCCTCTCATTTCAATCATAC+AGG - chr1_4:31743940-31743959 None:intergenic 35.0%
ATGTTGCATTTATATCTCCC+CGG + chr1_4:31743973-31743992 Msa0159980:intron 35.0%
! TCCAAACCTCCATGAATTTT+TGG + chr1_4:31744341-31744360 Msa0159980:intron 35.0%
ACCAAAAATTCATGGAGGTT+TGG - chr1_4:31744345-31744364 None:intergenic 35.0%
ATACACGCACCAAAAATTCA+TGG - chr1_4:31744353-31744372 None:intergenic 35.0%
ACCAATATGAGAGAGAGATA+TGG + chr1_4:31744476-31744495 Msa0159980:intron 35.0%
ATCTTAACTCGTATGCATCA+GGG - chr1_4:31744651-31744670 None:intergenic 35.0%
AATCTTAACTCGTATGCATC+AGG - chr1_4:31744652-31744671 None:intergenic 35.0%
CATGCAACCAAAATATGCAA+AGG - chr1_4:31745317-31745336 None:intergenic 35.0%
AGATTTAGGGACCTGATATT+TGG + chr1_4:31745542-31745561 Msa0159980:intron 35.0%
ATTTGGCCTAAAAAACTTGG+AGG + chr1_4:31745559-31745578 Msa0159980:intron 35.0%
ACAGATTGTCACTAAAGCAA+CGG - chr1_4:31745591-31745610 None:intergenic 35.0%
AAGCCCCAATACTTCAAAAA+TGG + chr1_4:31745612-31745631 Msa0159980:intron 35.0%
AACAAAGTATAACTCACTGG+AGG - chr1_4:31745984-31746003 None:intergenic 35.0%
GGAAACAAAGTATAACTCAC+TGG - chr1_4:31745987-31746006 None:intergenic 35.0%
CACAAGCAACATAACATAGA+GGG - chr1_4:31746013-31746032 None:intergenic 35.0%
ACACAAGCAACATAACATAG+AGG - chr1_4:31746014-31746033 None:intergenic 35.0%
TCAAAACTCCCGATATGATA+CGG - chr1_4:31746349-31746368 None:intergenic 35.0%
ATATGTATCGTGTGCTTCAT+AGG + chr1_4:31746437-31746456 Msa0159980:intron 35.0%
ATTAGTCACGTAAGATGCTT+AGG - chr1_4:31746834-31746853 None:intergenic 35.0%
GTGACTAATGAAGCCTATAA+GGG + chr1_4:31746845-31746864 Msa0159980:intron 35.0%
TGACTAATGAAGCCTATAAG+GGG + chr1_4:31746846-31746865 Msa0159980:intron 35.0%
! ATACTTGGTAGCTTCTAATG+GGG - chr1_4:31746921-31746940 None:intergenic 35.0%
GATACTTTGTGTTGCAGTAT+TGG - chr1_4:31747047-31747066 None:intergenic 35.0%
GAGTCAGATAAACTTTATCC+AGG - chr1_4:31747175-31747194 None:intergenic 35.0%
TATCACACTTGTCATCATCA+TGG - chr1_4:31747202-31747221 None:intergenic 35.0%
GTATAACATTGGACAGAATG+TGG - chr1_4:31747238-31747257 None:intergenic 35.0%
ATCTGATATCCGTGCTTTAT+AGG - chr1_4:31747338-31747357 None:intergenic 35.0%
CACGGATATCAGATATGATA+CGG + chr1_4:31747344-31747363 Msa0159980:intron 35.0%
TATGAAACACAGACAATCCT+CGG - chr1_4:31747475-31747494 None:intergenic 35.0%
! GGATCGTAAACTTCTACTTT+TGG - chr1_4:31747700-31747719 None:intergenic 35.0%
! GGTGTAGGTTTGAAATAAAC+AGG - chr1_4:31747826-31747845 None:intergenic 35.0%
GTTTATGTTCCTTTGTCCTT+GGG - chr1_4:31747870-31747889 None:intergenic 35.0%
AGTTTATGTTCCTTTGTCCT+TGG - chr1_4:31747871-31747890 None:intergenic 35.0%
AGGAACATAAACTCTTACTG+TGG + chr1_4:31747878-31747897 Msa0159980:intron 35.0%
TATGCAAATGCTAAGTTCTG+AGG - chr1_4:31747908-31747927 None:intergenic 35.0%
TACCAAATGAATCACAGACA+AGG + chr1_4:31747964-31747983 Msa0159980:intron 35.0%
!! ATCTGTTGATAATGTCAGAG+AGG - chr1_4:31748139-31748158 None:intergenic 35.0%
ATGTGCATCAAACAACAATG+TGG + chr1_4:31748185-31748204 Msa0159980:CDS 35.0%
AACAGCTGAAAACCTATTCA+TGG + chr1_4:31748215-31748234 Msa0159980:CDS 35.0%
ACAGCTGAAAACCTATTCAT+GGG + chr1_4:31748216-31748235 Msa0159980:CDS 35.0%
!! GTTAACAAGTTGATCTGATG+AGG - chr1_4:31748317-31748336 None:intergenic 35.0%
!! AGATTTGGTGGAGTTGATAA+TGG + chr1_4:31748390-31748409 Msa0159980:CDS 35.0%
!! TTATCCCTGTTGCTGTTTAT+TGG + chr1_4:31748503-31748522 Msa0159980:intron 35.0%
!!! ACTAACCGTTTTGTTTTTGG+TGG - chr1_4:31749152-31749171 None:intergenic 35.0%
AATCCACAAGAAGTGATAAG+AGG + chr1_4:31749360-31749379 Msa0159980:CDS 35.0%
TAACCTCTTATCACTTCTTG+TGG - chr1_4:31749366-31749385 None:intergenic 35.0%
GATAAGAGGTTACAAGAAAG+AGG + chr1_4:31749374-31749393 Msa0159980:CDS 35.0%
!! TGGACTTGATTTTTCAATGG+GGG + chr1_4:31749601-31749620 Msa0159980:CDS 35.0%
! CTCAAAAATGGAAGTGGTTT+TGG + chr1_4:31749667-31749686 Msa0159980:CDS 35.0%
GTTACAAAGAGAGTGAATCT+TGG + chr1_4:31749693-31749712 Msa0159980:CDS 35.0%
TATGTGAGTTACTAGGTGAA+AGG + chr1_4:31749854-31749873 Msa0159980:intron 35.0%
ATGGAGGTAGTGACAAAAAA+TGG + chr1_4:31749897-31749916 Msa0159980:CDS 35.0%
CAAAAACGAGGAACAATCTT+AGG - chr1_4:31750022-31750041 None:intergenic 35.0%
! CTAAGATTGTTCCTCGTTTT+TGG + chr1_4:31750020-31750039 Msa0159980:CDS 35.0%
AAGCTTAACATTGTAGCCTT+TGG - chr1_4:31750164-31750183 None:intergenic 35.0%
! GGCTACAATGTTAAGCTTTT+AGG + chr1_4:31750166-31750185 Msa0159980:CDS 35.0%
!!! AATGTTAAGCTTTTAGGGCA+TGG + chr1_4:31750172-31750191 Msa0159980:CDS 35.0%
TCAACCAAAGTTTGACACAT+AGG - chr1_4:31750202-31750221 None:intergenic 35.0%
! GATAGAGTGCTACAAAAAGA+AGG + chr1_4:31750238-31750257 Msa0159980:CDS 35.0%
CAAGATGTGAATCTGAGAAA+GGG + chr1_4:31750468-31750487 Msa0159980:exon 35.0%
CTTGCATCAAAGTGTAAACA+AGG - chr1_4:31750633-31750652 None:intergenic 35.0%
CTTGTTTACACTTTGATGCA+AGG + chr1_4:31750631-31750650 Msa0159980:three_prime_UTR 35.0%
CACCTAGCAGAAATTAAGCA+AGG + chr1_4:31736170-31736189 Msa0159980:CDS 40.0%
CACCTTGCTTAATTTCTGCT+AGG - chr1_4:31736175-31736194 None:intergenic 40.0%
!! TTTGGACAATGTAGTGGACA+TGG - chr1_4:31736261-31736280 None:intergenic 40.0%
TCCAAAGATGTACCAATCAG+TGG + chr1_4:31736275-31736294 Msa0159980:CDS 40.0%
!!! TTGGGAGGTACCATTCTTTT+GGG - chr1_4:31736309-31736328 None:intergenic 40.0%
GAGCTGAGATTTCTGTTCTT+GGG - chr1_4:31736327-31736346 None:intergenic 40.0%
CCTCAAGCTTAAAGGGATTA+GGG - chr1_4:31736349-31736368 None:intergenic 40.0%
TCCTCAAGCTTAAAGGGATT+AGG - chr1_4:31736350-31736369 None:intergenic 40.0%
CACCCATGTCAAAGATAATG+AGG + chr1_4:31736397-31736416 Msa0159980:CDS 40.0%
GTTGGAGACAAGCTTGAAAA+GGG - chr1_4:31736438-31736457 None:intergenic 40.0%
TGTTGGAGACAAGCTTGAAA+AGG - chr1_4:31736439-31736458 None:intergenic 40.0%
AGTTCCAGAAATCTGAGTTG+AGG - chr1_4:31736471-31736490 None:intergenic 40.0%
! GTCAGGTTAGTTGTCAATGT+CGG + chr1_4:31736668-31736687 Msa0159980:intron 40.0%
! TATCAATGCTTTTGCTTCCC+AGG - chr1_4:31736971-31736990 None:intergenic 40.0%
AACTCTAGCTGCATTCTCTT+TGG + chr1_4:31736990-31737009 Msa0159980:CDS 40.0%
! GGATTCCTCTTGTTGTGTAT+TGG + chr1_4:31737235-31737254 Msa0159980:CDS 40.0%
ACTGTCCAATACACAACAAG+AGG - chr1_4:31737243-31737262 None:intergenic 40.0%
GTTACCAGTACATGCAACAA+TGG - chr1_4:31737271-31737290 None:intergenic 40.0%
ATGTGGTGGTTAATGAGTTG+AGG + chr1_4:31737440-31737459 Msa0159980:CDS 40.0%
! ACTCTGCAATTTTCCAAACG+AGG - chr1_4:31737466-31737485 None:intergenic 40.0%
TCGTTTGGAAAATTGCAGAG+TGG + chr1_4:31737465-31737484 Msa0159980:CDS 40.0%
TTCTTGAGACTTCTGCTCAA+AGG + chr1_4:31737664-31737683 Msa0159980:CDS 40.0%
AGGCAACAACCAAGTTAAAC+AGG + chr1_4:31737720-31737739 Msa0159980:intron 40.0%
CAGCACTAACCTGTTTAACT+TGG - chr1_4:31737732-31737751 None:intergenic 40.0%
CAAGTTAAACAGGTTAGTGC+TGG + chr1_4:31737730-31737749 Msa0159980:intron 40.0%
AATTCGCTGTGTTTCCAATC+GGG - chr1_4:31737810-31737829 None:intergenic 40.0%
GAATTCGCTGTGTTTCCAAT+CGG - chr1_4:31737811-31737830 None:intergenic 40.0%
GCCAAAAAAGAGTTGGAGAA+GGG + chr1_4:31737886-31737905 Msa0159980:intron 40.0%
!!! ACCCTTCTCCAACTCTTTTT+TGG - chr1_4:31737890-31737909 None:intergenic 40.0%
ATCCAACATAAGGCATAGTG+TGG + chr1_4:31738484-31738503 Msa0159980:intron 40.0%
GCACAAGAGCAAAAATGGTT+TGG - chr1_4:31738635-31738654 None:intergenic 40.0%
! GATTTTGTGGATTCCCATTG+TGG + chr1_4:31738939-31738958 Msa0159980:intron 40.0%
GGATTCCCATTGTGGATAAA+TGG + chr1_4:31738947-31738966 Msa0159980:intron 40.0%
! GGGTTGATCACTGCAAAAAT+AGG - chr1_4:31739375-31739394 None:intergenic 40.0%
! GGAATCGATGCTTTTCCTTT+TGG + chr1_4:31739444-31739463 Msa0159980:CDS 40.0%
CCAAAACCATTCCCATTTCT+TGG - chr1_4:31739493-31739512 None:intergenic 40.0%
! CCAAGAAATGGGAATGGTTT+TGG + chr1_4:31739490-31739509 Msa0159980:CDS 40.0%
CAATACCCGCACATAAGAAT+GGG + chr1_4:31739877-31739896 Msa0159980:intron 40.0%
CAAAACCCATTCTTATGTGC+GGG - chr1_4:31739885-31739904 None:intergenic 40.0%
! ACATCGAGATTTTCCATAGC+CGG + chr1_4:31739954-31739973 Msa0159980:intron 40.0%
TAGTTGGTTAGGAATTGGCT+TGG - chr1_4:31740031-31740050 None:intergenic 40.0%
TCCTAACCAACTACCATAAC+TGG + chr1_4:31740038-31740057 Msa0159980:intron 40.0%
! TTTTGGCCAGTTATGGTAGT+TGG - chr1_4:31740047-31740066 None:intergenic 40.0%
CATTTCATGCCCTGAATCAT+AGG - chr1_4:31740376-31740395 None:intergenic 40.0%
CTATGATTCAGGGCATGAAA+TGG + chr1_4:31740374-31740393 Msa0159980:intron 40.0%
! TGAATTCTTGGACCCACTTT+TGG - chr1_4:31740532-31740551 None:intergenic 40.0%
! GACATTGATTACCACCAACT+AGG + chr1_4:31740605-31740624 Msa0159980:intron 40.0%
!!! GGTTTTTTTCTCCTAGTTGG+TGG - chr1_4:31740619-31740638 None:intergenic 40.0%
!!! TCGGGTTTTTTTCTCCTAGT+TGG - chr1_4:31740622-31740641 None:intergenic 40.0%
TTAGAAGAACCCATCCTGAT+GGG - chr1_4:31740766-31740785 None:intergenic 40.0%
! GATGGGTTCTTCTAAGTAGA+GGG + chr1_4:31740771-31740790 Msa0159980:intron 40.0%
GTTTCAACCCATTCAACAAG+TGG - chr1_4:31741254-31741273 None:intergenic 40.0%
!! GGTTAATGAGTTGACTCGTT+TGG + chr1_4:31742096-31742115 Msa0159980:intron 40.0%
!! TAAAGACAGCTCTGGAAGAT+TGG + chr1_4:31742581-31742600 Msa0159980:intron 40.0%
AAATGAACACCGCAAGAAGA+CGG + chr1_4:31743116-31743135 Msa0159980:intron 40.0%
! TTTGATTTCCCGTCTTCTTG+CGG - chr1_4:31743128-31743147 None:intergenic 40.0%
GTGAGAAAAAGATGAAGAGG+GGG + chr1_4:31743252-31743271 Msa0159980:intron 40.0%
ACCTAGAGAGAGAGAAAACT+AGG + chr1_4:31743334-31743353 Msa0159980:intron 40.0%
CCTAGAGAGAGAGAAAACTA+GGG + chr1_4:31743335-31743354 Msa0159980:intron 40.0%
CTAGAGAGAGAGAAAACTAG+GGG + chr1_4:31743336-31743355 Msa0159980:intron 40.0%
AGGAACGACACATCTGAATT+CGG - chr1_4:31743721-31743740 None:intergenic 40.0%
! GGACTCTAAGTTGACATTTG+AGG - chr1_4:31743758-31743777 None:intergenic 40.0%
!!! CGATAGCGTCGATTTTGAAA+CGG - chr1_4:31743779-31743798 None:intergenic 40.0%
! TTCAGACGGTACTTTTGTTC+TGG - chr1_4:31743896-31743915 None:intergenic 40.0%
ATTTATATCTCCCCGGCATA+GGG + chr1_4:31743980-31743999 Msa0159980:intron 40.0%
CTAGGAATATGGTCGTTGAT+TGG - chr1_4:31744119-31744138 None:intergenic 40.0%
!! TGTCCCAAACTCTAAGATTG+CGG + chr1_4:31744175-31744194 Msa0159980:intron 40.0%
ACACCGCAATCTTAGAGTTT+GGG - chr1_4:31744181-31744200 None:intergenic 40.0%
AACACCGCAATCTTAGAGTT+TGG - chr1_4:31744182-31744201 None:intergenic 40.0%
!!! CAACTGTCTTTTGGAGCATT+TGG - chr1_4:31744206-31744225 None:intergenic 40.0%
ATGCTCCAAAAGACAGTTGT+CGG + chr1_4:31744207-31744226 Msa0159980:intron 40.0%
! AATTCATGGAGGTTTGGAAC+AGG - chr1_4:31744339-31744358 None:intergenic 40.0%
GCCATATCTCTCTCTCATAT+TGG - chr1_4:31744480-31744499 None:intergenic 40.0%
TTGATTCATCATGTTGTGGG+AGG + chr1_4:31745104-31745123 Msa0159980:intron 40.0%
ATTGATGGGGTTGAGTCTAA+CGG - chr1_4:31745140-31745159 None:intergenic 40.0%
!!! CTTAGGCCTCCAAGTTTTTT+AGG - chr1_4:31745568-31745587 None:intergenic 40.0%
ACTTCTCTGATACGCGTATT+GGG - chr1_4:31745687-31745706 None:intergenic 40.0%
TACTTCTCTGATACGCGTAT+TGG - chr1_4:31745688-31745707 None:intergenic 40.0%
AAAAAATGACCGGTACGTGT+CGG + chr1_4:31745737-31745756 Msa0159980:intron 40.0%
!! TAAGACAGAAGTATCGGTGT+CGG - chr1_4:31745781-31745800 None:intergenic 40.0%
GCTATCGCTTAATTGTGACA+AGG - chr1_4:31745889-31745908 None:intergenic 40.0%
CGGTTGTAATGGTTAGAAGA+GGG - chr1_4:31745916-31745935 None:intergenic 40.0%
TCGGTTGTAATGGTTAGAAG+AGG - chr1_4:31745917-31745936 None:intergenic 40.0%
AGCAACATAACATAGAGGGA+GGG - chr1_4:31746009-31746028 None:intergenic 40.0%
AAGCAACATAACATAGAGGG+AGG - chr1_4:31746010-31746029 None:intergenic 40.0%
TTCATAGGTGACAATCCCTT+TGG + chr1_4:31746452-31746471 Msa0159980:intron 40.0%
TCATAGGTGACAATCCCTTT+GGG + chr1_4:31746453-31746472 Msa0159980:intron 40.0%
CGTGACTAATGAAGCCTATA+AGG + chr1_4:31746844-31746863 Msa0159980:intron 40.0%
TTTCACAACATGCCCCTTAT+AGG - chr1_4:31746861-31746880 None:intergenic 40.0%
! TCATCCAGATCAAATGGGTT+TGG - chr1_4:31747143-31747162 None:intergenic 40.0%
GAGACTCATCCAGATCAAAT+GGG - chr1_4:31747148-31747167 None:intergenic 40.0%
TGAGACTCATCCAGATCAAA+TGG - chr1_4:31747149-31747168 None:intergenic 40.0%
CATTGGACAGAATGTGGAAA+AGG - chr1_4:31747232-31747251 None:intergenic 40.0%
ATATGATACGGACACTGACA+CGG + chr1_4:31747356-31747375 Msa0159980:intron 40.0%
! TGTAATCATAGGTGTCGTGT+TGG + chr1_4:31747409-31747428 Msa0159980:intron 40.0%
! AAGTATAAGTCTGCGGGTTA+AGG - chr1_4:31747643-31747662 None:intergenic 40.0%
! AGCCTTGTCTGTGATTCATT+TGG - chr1_4:31747969-31747988 None:intergenic 40.0%
! ACTGAAGCTGATTTCTTGTC+AGG + chr1_4:31748028-31748047 Msa0159980:CDS 40.0%
! TGCTTTTGCATCCCATGAAT+AGG - chr1_4:31748230-31748249 None:intergenic 40.0%
TTCCAAAGTGAAAGCAGCTA+GGG - chr1_4:31748260-31748279 None:intergenic 40.0%
ATTCCAAAGTGAAAGCAGCT+AGG - chr1_4:31748261-31748280 None:intergenic 40.0%
!! GCTGCTTTCACTTTGGAATA+TGG + chr1_4:31748262-31748281 Msa0159980:CDS 40.0%
TGCTTCTGCATATTCATGAG+TGG + chr1_4:31748416-31748435 Msa0159980:CDS 40.0%
GCTTCTGCATATTCATGAGT+GGG + chr1_4:31748417-31748436 Msa0159980:CDS 40.0%
ATAACCAACACTAGACCAAG+TGG - chr1_4:31748443-31748462 None:intergenic 40.0%
TGCAATGCATCAGACAAAGA+AGG - chr1_4:31748481-31748500 None:intergenic 40.0%
TCACAAATAGGTGACACACT+TGG + chr1_4:31748915-31748934 Msa0159980:intron 40.0%
!! TGGTGGTGCCATCATATATT+AGG - chr1_4:31749135-31749154 None:intergenic 40.0%
TGGCACCACCAAAAACAAAA+CGG + chr1_4:31749144-31749163 Msa0159980:CDS 40.0%
TCTCATCGTCAACTTTGTTG+AGG - chr1_4:31749302-31749321 None:intergenic 40.0%
TTCTATCCATGACAGATTGC+AGG + chr1_4:31749335-31749354 Msa0159980:CDS 40.0%
GATTACTCTTCTGAGTTACC+TGG + chr1_4:31749486-31749505 Msa0159980:CDS 40.0%
TCTCTTATGAGTCTAATGCC+AGG - chr1_4:31749507-31749526 None:intergenic 40.0%
!! CTCCCTTTTAGGAAACAAGA+TGG + chr1_4:31749633-31749652 Msa0159980:CDS 40.0%
GAGAGTGAATCTTGGAATAC+AGG + chr1_4:31749701-31749720 Msa0159980:CDS 40.0%
TCTCACAGTCTATAGCATCT+TGG - chr1_4:31750078-31750097 None:intergenic 40.0%
TGTCTCAAACAAGATCCACA+AGG + chr1_4:31750124-31750143 Msa0159980:CDS 40.0%
TCAAACAAGATCCACAAGGT+TGG + chr1_4:31750128-31750147 Msa0159980:CDS 40.0%
CAAACAAGATCCACAAGGTT+GGG + chr1_4:31750129-31750148 Msa0159980:CDS 40.0%
TGAGCCTATGTGTCAAACTT+TGG + chr1_4:31750195-31750214 Msa0159980:CDS 40.0%
GCAAGATGTGAATCTGAGAA+AGG + chr1_4:31750467-31750486 Msa0159980:exon 40.0%
GTGTAAACAAGGTGGTTACA+TGG - chr1_4:31750622-31750641 None:intergenic 40.0%
GCATCAAAGTGTAAACAAGG+TGG - chr1_4:31750630-31750649 None:intergenic 40.0%
TTTACACTTTGATGCAAGGG+TGG + chr1_4:31750635-31750654 Msa0159980:three_prime_UTR 40.0%
! GCCACTGATTGGTACATCTT+TGG - chr1_4:31736279-31736298 None:intergenic 45.0%
!!! CTTGGGAGGTACCATTCTTT+TGG - chr1_4:31736310-31736329 None:intergenic 45.0%
CTGAGATTTCTGTTCTTGGG+AGG - chr1_4:31736324-31736343 None:intergenic 45.0%
GGAGCTGAGATTTCTGTTCT+TGG - chr1_4:31736328-31736347 None:intergenic 45.0%
CCCTAATCCCTTTAAGCTTG+AGG + chr1_4:31736346-31736365 Msa0159980:CDS 45.0%
! AAATCTGAGTTGAGGCAGAG+AGG - chr1_4:31736463-31736482 None:intergenic 45.0%
TCTGCCTCAACTCAGATTTC+TGG + chr1_4:31736464-31736483 Msa0159980:CDS 45.0%
CCTGACAAGAAATCCTCTTC+AGG - chr1_4:31736654-31736673 None:intergenic 45.0%
CCTGAAGAGGATTTCTTGTC+AGG + chr1_4:31736651-31736670 Msa0159980:intron 45.0%
GGAGAATCCACATTGTTGTC+TGG - chr1_4:31736930-31736949 None:intergenic 45.0%
!! GCTGCATTCTCTTTGGAGTA+TGG + chr1_4:31736997-31737016 Msa0159980:CDS 45.0%
ACATTAAACAGTGGGCAGAC+TGG + chr1_4:31737157-31737176 Msa0159980:CDS 45.0%
GTCTGCTTTCGGTTATGACT+TGG + chr1_4:31737179-31737198 Msa0159980:CDS 45.0%
CTTTGCCTGATGCTATGCAA+TGG + chr1_4:31737214-31737233 Msa0159980:CDS 45.0%
GGAATCCATTGCATAGCATC+AGG - chr1_4:31737222-31737241 None:intergenic 45.0%
GCTACCATTGTTGCATGTAC+TGG + chr1_4:31737264-31737283 Msa0159980:CDS 45.0%
GAACTTACGATATACCGACG+AGG - chr1_4:31737293-31737312 None:intergenic 45.0%
AAAAAGGCTCTCTCATGTGG+TGG + chr1_4:31737426-31737445 Msa0159980:CDS 45.0%
! TAATGAGTTGAGGCCTCGTT+TGG + chr1_4:31737450-31737469 Msa0159980:CDS 45.0%
! ATGGCTGGCCAAAAAAGAGT+TGG + chr1_4:31737879-31737898 Msa0159980:intron 45.0%
GGCCAAAAAAGAGTTGGAGA+AGG + chr1_4:31737885-31737904 Msa0159980:intron 45.0%
AGCCACACTATGCCTTATGT+TGG - chr1_4:31738489-31738508 None:intergenic 45.0%
CACACCAATATCGATGGTCT+AGG + chr1_4:31738710-31738729 Msa0159980:intron 45.0%
AGACTTCAACACCCTGTGTT+GGG - chr1_4:31738780-31738799 None:intergenic 45.0%
AAGACTTCAACACCCTGTGT+TGG - chr1_4:31738781-31738800 None:intergenic 45.0%
!! TATATGTGTCGGTGTCGTGT+CGG + chr1_4:31739151-31739170 Msa0159980:intron 45.0%
AACACTTCTCTGAGCTACCA+GGG + chr1_4:31739304-31739323 Msa0159980:intron 45.0%
TTCTTTATTATCCCACGCCC+TGG - chr1_4:31739324-31739343 None:intergenic 45.0%
TTTGCAGTGATCAACCCTCA+AGG + chr1_4:31739378-31739397 Msa0159980:CDS 45.0%
CCATTCTTATGTGCGGGTAT+TGG - chr1_4:31739879-31739898 None:intergenic 45.0%
CCAATACCCGCACATAAGAA+TGG + chr1_4:31739876-31739895 Msa0159980:intron 45.0%
TTTGGTACTTCTTCCGGCTA+TGG - chr1_4:31739970-31739989 None:intergenic 45.0%
GCCAGTTATGGTAGTTGGTT+AGG - chr1_4:31740042-31740061 None:intergenic 45.0%
!! GGTTTGCTTGGGGTCTTTTT+CGG - chr1_4:31740192-31740211 None:intergenic 45.0%
AAAAAGACCCCAAGCAAACC+CGG + chr1_4:31740192-31740211 Msa0159980:intron 45.0%
TGTCTCAAACAAGACCCATC+AGG + chr1_4:31740749-31740768 Msa0159980:intron 45.0%
TCAAACAAGACCCATCAGGA+TGG + chr1_4:31740753-31740772 Msa0159980:intron 45.0%
CAAACAAGACCCATCAGGAT+GGG + chr1_4:31740754-31740773 Msa0159980:intron 45.0%
CTTAGAAGAACCCATCCTGA+TGG - chr1_4:31740767-31740786 None:intergenic 45.0%
! GGATGGGTTCTTCTAAGTAG+AGG + chr1_4:31740770-31740789 Msa0159980:intron 45.0%
! GGGCAGCATGTTACACTTTT+TGG + chr1_4:31740791-31740810 Msa0159980:intron 45.0%
ACTTGTCCCAATCCTACTTG+TGG + chr1_4:31740986-31741005 Msa0159980:CDS 45.0%
ACACGTCCACAAGTAGGATT+GGG - chr1_4:31740995-31741014 None:intergenic 45.0%
AATGAACACCGCAAGAAGAC+GGG + chr1_4:31743117-31743136 Msa0159980:intron 45.0%
! TTGTTGTTCGTCGTCTTGTG+CGG - chr1_4:31743156-31743175 None:intergenic 45.0%
! CTTCATTGAGGGGTGGTTTT+GGG - chr1_4:31743299-31743318 None:intergenic 45.0%
! TCTTCATTGAGGGGTGGTTT+TGG - chr1_4:31743300-31743319 None:intergenic 45.0%
TCAGTTTCTTCATTGAGGGG+TGG - chr1_4:31743306-31743325 None:intergenic 45.0%
!! CCCTAGTTTTCTCTCTCTCT+AGG - chr1_4:31743338-31743357 None:intergenic 45.0%
AGAGAGAGAAAACTAGGGGT+CGG + chr1_4:31743340-31743359 Msa0159980:intron 45.0%
AAAACTAGGGGTCGGACAAA+GGG + chr1_4:31743348-31743367 Msa0159980:intron 45.0%
!! ACTCTAGGGTGGAGTTTGTT+AGG - chr1_4:31743651-31743670 None:intergenic 45.0%
GTCGTTCCTAGTAGACTGAA+AGG + chr1_4:31743732-31743751 Msa0159980:intron 45.0%
TTGAGGCCTTTCAGTCTACT+AGG - chr1_4:31743741-31743760 None:intergenic 45.0%
CATTTATATCTCCCCGGCAT+AGG + chr1_4:31743979-31743998 Msa0159980:intron 45.0%
CACAACATGTTGTTACTGCG+TGG - chr1_4:31744011-31744030 None:intergenic 45.0%
! TATGGTCGTTGATTGGCAAC+TGG - chr1_4:31744112-31744131 None:intergenic 45.0%
TGCTCCAAAAGACAGTTGTC+GGG + chr1_4:31744208-31744227 Msa0159980:intron 45.0%
CACGCACCAAAAATTCATGG+AGG - chr1_4:31744350-31744369 None:intergenic 45.0%
AATCGGGGTAAAGTCCAAGA+CGG + chr1_4:31744559-31744578 Msa0159980:intron 45.0%
!! GAGTTATTTTGTGGCCGTCT+TGG - chr1_4:31744576-31744595 None:intergenic 45.0%
TGTCACTAAAGCAACGGCTT+AGG - chr1_4:31745585-31745604 None:intergenic 45.0%
!! TAACTCACTGGAGGTGTTGA+TGG - chr1_4:31745975-31745994 None:intergenic 45.0%
GCAACATAACATAGAGGGAG+GGG - chr1_4:31746008-31746027 None:intergenic 45.0%
GTATCGAGGCCGTATCATAT+CGG + chr1_4:31746337-31746356 Msa0159980:intron 45.0%
TATCGAGGCCGTATCATATC+GGG + chr1_4:31746338-31746357 Msa0159980:intron 45.0%
GCATGTTTCACACCTGAACA+AGG + chr1_4:31746895-31746914 Msa0159980:intron 45.0%
GTTTGGCAGCTTAGTTCCAT+TGG - chr1_4:31747126-31747145 None:intergenic 45.0%
TCTGGATGAGTCTCAAATCC+TGG + chr1_4:31747154-31747173 Msa0159980:intron 45.0%
CACACTTGTCATCATCATGG+AGG - chr1_4:31747199-31747218 None:intergenic 45.0%
TCCTCGGATTAAGTGTGTCT+CGG - chr1_4:31747459-31747478 None:intergenic 45.0%
! TATAAGTCTGCGGGTTAAGG+TGG - chr1_4:31747640-31747659 None:intergenic 45.0%
AATGAGGCGGTAAATCGATC+CGG - chr1_4:31747847-31747866 None:intergenic 45.0%
TTCCTTTGTCCTTGGGAATG+AGG - chr1_4:31747863-31747882 None:intergenic 45.0%
!! GCAAATGCTAAGTTCTGAGG+TGG - chr1_4:31747905-31747924 None:intergenic 45.0%
AGCTTCAGTGTGCGAAATTC+TGG - chr1_4:31748017-31748036 None:intergenic 45.0%
ATGAGGTTGAAGTCTCAGTG+AGG - chr1_4:31748300-31748319 None:intergenic 45.0%
ACTCCACCAAATCTGTGACA+GGG - chr1_4:31748384-31748403 None:intergenic 45.0%
AACTCCACCAAATCTGTGAC+AGG - chr1_4:31748385-31748404 None:intergenic 45.0%
ATATTCATGAGTGGGCCACT+TGG + chr1_4:31748425-31748444 Msa0159980:CDS 45.0%
AAGCTTCTGATCCAACGCAA+TGG + chr1_4:31749100-31749119 Msa0159980:CDS 45.0%
GGAGATTATCTCCATTGCGT+TGG - chr1_4:31749114-31749133 None:intergenic 45.0%
GATTGTCCTGCAATCTGTCA+TGG - chr1_4:31749344-31749363 None:intergenic 45.0%
TTCTGGTCATCGTCAAAGAC+GGG - chr1_4:31749420-31749439 None:intergenic 45.0%
CTTCTGGTCATCGTCAAAGA+CGG - chr1_4:31749421-31749440 None:intergenic 45.0%
TTGGGATAAGCCTATTGTCC+CGG + chr1_4:31749539-31749558 Msa0159980:CDS 45.0%
! GGATAGATGCACTCCCTTTT+AGG + chr1_4:31749622-31749641 Msa0159980:CDS 45.0%
CCAATGCTAAGGTGAAGTCT+TGG - chr1_4:31749925-31749944 None:intergenic 45.0%
CCAAGACTTCACCTTAGCAT+TGG + chr1_4:31749922-31749941 Msa0159980:CDS 45.0%
GTGAGAATAACCCAACCTTG+TGG - chr1_4:31750142-31750161 None:intergenic 45.0%
GGTTGGGTTATTCTCACCAA+AGG + chr1_4:31750145-31750164 Msa0159980:CDS 45.0%
TCATGCCCAAATCCTACTTG+TGG + chr1_4:31750376-31750395 Msa0159980:CDS 45.0%
CACGTCCACAAGTAGGATTT+GGG - chr1_4:31750384-31750403 None:intergenic 45.0%
ACACGTCCACAAGTAGGATT+TGG - chr1_4:31740995-31741014 None:intergenic 45.0%
GTGAATCTGAGAAAGGGAAG+AGG + chr1_4:31750474-31750493 Msa0159980:exon 45.0%
!!! TAAATTCTTTAAAAAAAAAA+CGG - chr1_4:31739723-31739742 None:intergenic 5.0%
!!! TTTTTTTTTTAAAGAATTTA+GGG + chr1_4:31739723-31739742 Msa0159980:intron 5.0%
!!! AATGTTAATAATTATTTTTT+AGG + chr1_4:31741705-31741724 Msa0159980:intron 5.0%
GGCACTGCAACCCAAAAGAA+TGG + chr1_4:31736296-31736315 Msa0159980:CDS 50.0%
AGTTGAGGCAGAGAGGATGT+TGG - chr1_4:31736456-31736475 None:intergenic 50.0%
CTCTTCAGGACAGAGAAGTC+TGG - chr1_4:31736640-31736659 None:intergenic 50.0%
CAGACTTCTCTGTCCTGAAG+AGG + chr1_4:31736638-31736657 Msa0159980:intron 50.0%
! TGACAGATGATAACGACCCG+CGG + chr1_4:31736886-31736905 Msa0159980:intron 50.0%
GTGCACACCAGACAACAATG+TGG + chr1_4:31736920-31736939 Msa0159980:intron 50.0%
!! AGGAGAAGTCTCTGAGGTGA+TGG - chr1_4:31736951-31736970 None:intergenic 50.0%
ATCACCTCAGAGACTTCTCC+TGG + chr1_4:31736950-31736969 Msa0159980:CDS 50.0%
TCACCTCAGAGACTTCTCCT+GGG + chr1_4:31736951-31736970 Msa0159980:CDS 50.0%
! GCATGTACTGGTAACCTCGT+CGG + chr1_4:31737276-31737295 Msa0159980:CDS 50.0%
! GCAGTGCTATTGATCCCGAT+TGG + chr1_4:31737793-31737812 Msa0159980:intron 50.0%
CGGACCTAGACCATCGATAT+TGG - chr1_4:31738717-31738736 None:intergenic 50.0%
GAACACTTCTCTGAGCTACC+AGG + chr1_4:31739303-31739322 Msa0159980:intron 50.0%
CGCTTAGTTCGCTTGTTCGT+GGG - chr1_4:31739911-31739930 None:intergenic 50.0%
TCGCTTAGTTCGCTTGTTCG+TGG - chr1_4:31739912-31739931 None:intergenic 50.0%
!! AGCTGTGTGTTTCTGGCTGT+GGG - chr1_4:31740111-31740130 None:intergenic 50.0%
! AAGGTTTCCGGGTTTGCTTG+GGG - chr1_4:31740202-31740221 None:intergenic 50.0%
! GAAGGTTTCCGGGTTTGCTT+GGG - chr1_4:31740203-31740222 None:intergenic 50.0%
! TGAAGGTTTCCGGGTTTGCT+TGG - chr1_4:31740204-31740223 None:intergenic 50.0%
CACACGTCCACAAGTAGGAT+TGG - chr1_4:31740996-31741015 None:intergenic 50.0%
TCCTACTTGTGGACGTGTGA+TGG + chr1_4:31740997-31741016 Msa0159980:CDS 50.0%
TCCATCACACGTCCACAAGT+AGG - chr1_4:31741001-31741020 None:intergenic 50.0%
TACTTGTGGACGTGTGATGG+AGG + chr1_4:31741000-31741019 Msa0159980:CDS 50.0%
ACAGGAATATCCATGGCCTC+CGG + chr1_4:31743036-31743055 Msa0159980:intron 50.0%
GAAAACTAGGGGTCGGACAA+AGG + chr1_4:31743347-31743366 Msa0159980:intron 50.0%
TGTTAGGCGACAAACCAACG+CGG - chr1_4:31743635-31743654 None:intergenic 50.0%
!! GTAGTAGAAGCACCCACATC+CGG + chr1_4:31744033-31744052 Msa0159980:intron 50.0%
GCTGATGCGCATTTGATGCA+AGG + chr1_4:31744070-31744089 Msa0159980:intron 50.0%
GCATTTGATGCAAGGACAGC+AGG + chr1_4:31744078-31744097 Msa0159980:intron 50.0%
! AACGCCCGACAACTGTCTTT+TGG - chr1_4:31744215-31744234 None:intergenic 50.0%
AAAAGACAGTTGTCGGGCGT+TGG + chr1_4:31744214-31744233 Msa0159980:intron 50.0%
CTGAATAGTGCCCCACAATC+CGG + chr1_4:31744312-31744331 Msa0159980:intron 50.0%
TTGGAACAGGACCGGATTGT+GGG - chr1_4:31744326-31744345 None:intergenic 50.0%
! TTTGGAACAGGACCGGATTG+TGG - chr1_4:31744327-31744346 None:intergenic 50.0%
! ATGGAGGTTTGGAACAGGAC+CGG - chr1_4:31744334-31744353 None:intergenic 50.0%
CATCTCAGTACACTCTGTCG+AGG + chr1_4:31744896-31744915 Msa0159980:intron 50.0%
TCAGTACACTCTGTCGAGGT+CGG + chr1_4:31744900-31744919 Msa0159980:intron 50.0%
ATGGGGTTGAGTCTAACGGA+AGG - chr1_4:31745136-31745155 None:intergenic 50.0%
!! CTTCTAATGGGGCCTTGTTC+AGG - chr1_4:31746910-31746929 None:intergenic 50.0%
GCTGCCAAACCCATTTGATC+TGG + chr1_4:31747136-31747155 Msa0159980:intron 50.0%
! CATAGGTGTCGTGTTGGTGT+CGG + chr1_4:31747415-31747434 Msa0159980:intron 50.0%
!! TGTCTCGGTGTCAGACACAT+CGG - chr1_4:31747444-31747463 None:intergenic 50.0%
ACCGAGACACACTTAATCCG+AGG + chr1_4:31747455-31747474 Msa0159980:intron 50.0%
GATTTACCGCCTCATTCCCA+AGG + chr1_4:31747851-31747870 Msa0159980:intron 50.0%
CTTTGTCCTTGGGAATGAGG+CGG - chr1_4:31747860-31747879 None:intergenic 50.0%
AGACAAGGCTAGCAGAAAGC+AGG + chr1_4:31747979-31747998 Msa0159980:intron 50.0%
GACAAGGCTAGCAGAAAGCA+GGG + chr1_4:31747980-31747999 Msa0159980:intron 50.0%
! AGCCCTAGCTGCTTTCACTT+TGG + chr1_4:31748255-31748274 Msa0159980:CDS 50.0%
CACTGTCCCTGTCACAGATT+TGG + chr1_4:31748375-31748394 Msa0159980:CDS 50.0%
TGTCCCTGTCACAGATTTGG+TGG + chr1_4:31748378-31748397 Msa0159980:CDS 50.0%
GCTTCCATTGTTGCTGCTAC+TGG + chr1_4:31748532-31748551 Msa0159980:intron 50.0%
GTTGCCAGTAGCAGCAACAA+TGG - chr1_4:31748539-31748558 None:intergenic 50.0%
GCTGCTACTGGCAACATCAT+TGG + chr1_4:31748544-31748563 Msa0159980:intron 50.0%
TCTGGTCATCGTCAAAGACG+GGG - chr1_4:31749419-31749438 None:intergenic 50.0%
TAAGCCTATTGTCCCGGTGT+TGG + chr1_4:31749545-31749564 Msa0159980:CDS 50.0%
AAGCCTATTGTCCCGGTGTT+GGG + chr1_4:31749546-31749565 Msa0159980:CDS 50.0%
TCCTACTTGTGGACGTGTGA+TGG + chr1_4:31740997-31741016 Msa0159980:CDS 50.0%
TCCATCACACGTCCACAAGT+AGG - chr1_4:31741001-31741020 None:intergenic 50.0%
TACTTGTGGACGTGTGATGG+AGG + chr1_4:31741000-31741019 Msa0159980:CDS 50.0%
CAAGGTGGTTACATGGCACT+AGG - chr1_4:31750615-31750634 None:intergenic 50.0%
! TGGGTTGCAGTGCCACTGAT+TGG - chr1_4:31736290-31736309 None:intergenic 55.0%
TGCACATTCTGTTGTGCCGC+GGG - chr1_4:31736905-31736924 None:intergenic 55.0%
GTGCACATTCTGTTGTGCCG+CGG - chr1_4:31736906-31736925 None:intergenic 55.0%
CTTCCCAGGAGAAGTCTCTG+AGG - chr1_4:31736957-31736976 None:intergenic 55.0%
!! TGGGCAGACTGGTCTGCTTT+CGG + chr1_4:31737168-31737187 Msa0159980:CDS 55.0%
ATGTTGGATGCTCCCCTGCA+TGG - chr1_4:31738473-31738492 None:intergenic 55.0%
!! GCAGGGGAGCATCCAACATA+AGG + chr1_4:31738474-31738493 Msa0159980:intron 55.0%
!! TGTTTCTGGCTGTGGGCAAC+AGG - chr1_4:31740104-31740123 None:intergenic 55.0%
!! CAGCTGTGTGTTTCTGGCTG+TGG - chr1_4:31740112-31740131 None:intergenic 55.0%
GAGGCTCAGCTGTGTGTTTC+TGG - chr1_4:31740118-31740137 None:intergenic 55.0%
GATGAAGAGGGGGTGATTCC+AGG + chr1_4:31743262-31743281 Msa0159980:intron 55.0%
!! AGCGGGACTAGCTAATAGCG+TGG + chr1_4:31743585-31743604 Msa0159980:intron 55.0%
! AAGAGCATGAGCAACCGCGT+TGG + chr1_4:31743618-31743637 Msa0159980:intron 55.0%
TGTGGAGCGCGCTAGGAATA+TGG - chr1_4:31744130-31744149 None:intergenic 55.0%
TGGAACAGGACCGGATTGTG+GGG - chr1_4:31744325-31744344 None:intergenic 55.0%
TATGCATCAGGGTCGTGGTG+GGG - chr1_4:31744640-31744659 None:intergenic 55.0%
GTATGCATCAGGGTCGTGGT+GGG - chr1_4:31744641-31744660 None:intergenic 55.0%
ACTCGTATGCATCAGGGTCG+TGG - chr1_4:31744645-31744664 None:intergenic 55.0%
TGGGACGTATCGAGACGTGT+CGG - chr1_4:31745668-31745687 None:intergenic 55.0%
TGACCGGTACGTGTCGGATA+CGG + chr1_4:31745743-31745762 Msa0159980:intron 55.0%
TAGCCGTATCCGACACGTAC+CGG - chr1_4:31745749-31745768 None:intergenic 55.0%
!! CTCACTGGAGGTGTTGATGG+AGG - chr1_4:31745972-31745991 None:intergenic 55.0%
AGGTGACAATCCCTTTGGGC+AGG + chr1_4:31746457-31746476 Msa0159980:intron 55.0%
GCGGTAAATCGATCCGGTGT+AGG - chr1_4:31747841-31747860 None:intergenic 55.0%
CGCCTCATTCCCAAGGACAA+AGG + chr1_4:31747858-31747877 Msa0159980:intron 55.0%
TGGGCCACTTGGTCTAGTGT+TGG + chr1_4:31748436-31748455 Msa0159980:CDS 55.0%
TCACCTAAAGGGCCCAACAC+CGG - chr1_4:31749561-31749580 None:intergenic 55.0%
TCTGTGCAGCAGCAGCATCA+CGG - chr1_4:31750444-31750463 None:intergenic 55.0%
GATGCTGCTGCTGCACAGAA+TGG + chr1_4:31750445-31750464 Msa0159980:CDS 55.0%
TTCTCTGAGCTACCAGGGCG+TGG + chr1_4:31739309-31739328 Msa0159980:intron 60.0%
TCTCTGAGCTACCAGGGCGT+GGG + chr1_4:31739310-31739329 Msa0159980:intron 60.0%
CGTCAACGTTGCAGATCCGG+AGG - chr1_4:31743055-31743074 None:intergenic 60.0%
GGGCGTCAACGTTGCAGATC+CGG - chr1_4:31743058-31743077 None:intergenic 60.0%
! GAAGCACCCACATCCGGAGT+CGG + chr1_4:31744039-31744058 Msa0159980:intron 60.0%
!! CCTTCACCGACTCCGGATGT+GGG - chr1_4:31744048-31744067 None:intergenic 60.0%
!! TCAGCAGCCTTCACCGACTC+CGG - chr1_4:31744055-31744074 None:intergenic 60.0%
CGTATGCATCAGGGTCGTGG+TGG - chr1_4:31744642-31744661 None:intergenic 60.0%
GAGTGCAGAGCCTGCCCAAA+GGG - chr1_4:31746470-31746489 None:intergenic 60.0%
AGAGTGCAGAGCCTGCCCAA+AGG - chr1_4:31746471-31746490 None:intergenic 60.0%
AGGCTAGCAGAAAGCAGGGC+TGG + chr1_4:31747984-31748003 Msa0159980:CDS 60.0%
TGCACATAGCGTTCGCCACG+AGG - chr1_4:31748172-31748191 None:intergenic 60.0%
CACCTAAAGGGCCCAACACC+GGG - chr1_4:31749560-31749579 None:intergenic 60.0%
!! CGGTGTCGTGTCGGTGTCAC+CGG + chr1_4:31739160-31739179 Msa0159980:intron 65.0%
CGTTGCAGATCCGGAGGCCA+TGG - chr1_4:31743049-31743068 None:intergenic 65.0%
TGCGTGGCAGCACCCTATGC+CGG - chr1_4:31743995-31744014 None:intergenic 65.0%
CCCACATCCGGAGTCGGTGA+AGG + chr1_4:31744045-31744064 Msa0159980:intron 65.0%
!! GCCTTCACCGACTCCGGATG+TGG - chr1_4:31744049-31744068 None:intergenic 65.0%
CTACGGTTGTGGAGCGCGCT+AGG - chr1_4:31744137-31744156 None:intergenic 65.0%
GCGCTCCACAACCGTAGCAC+TGG + chr1_4:31744140-31744159 Msa0159980:intron 65.0%
GGGCCCAACACCGGGACAAT+AGG - chr1_4:31749552-31749571 None:intergenic 65.0%
! GTCCCGGTGTTGGGCCCTTT+AGG + chr1_4:31749555-31749574 Msa0159980:CDS 65.0%
GTGCAGCAGCAGCATCACGG+TGG - chr1_4:31750441-31750460 None:intergenic 65.0%
CGTGGCAGCACCCTATGCCG+GGG - chr1_4:31743993-31744012 None:intergenic 70.0%
GCGTGGCAGCACCCTATGCC+GGG - chr1_4:31743994-31744013 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 31736167 31750751 31736167 ID=Msa0159980;Name=Msa0159980
chr1_4 mRNA 31736167 31750751 31736167 ID=Msa0159980-mRNA-1;Parent=Msa0159980;Name=Msa0159980-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.54|0.5|1|0.81|0.83|12|274|1009
chr1_4 exon 31736167 31736505 31736167 ID=Msa0159980-mRNA-1:exon:10016;Parent=Msa0159980-mRNA-1
chr1_4 exon 31736931 31737304 31736931 ID=Msa0159980-mRNA-1:exon:10017;Parent=Msa0159980-mRNA-1
chr1_4 exon 31737402 31737493 31737402 ID=Msa0159980-mRNA-1:exon:10018;Parent=Msa0159980-mRNA-1
chr1_4 exon 31737602 31737732 31737602 ID=Msa0159980-mRNA-1:exon:10019;Parent=Msa0159980-mRNA-1
chr1_4 exon 31739318 31739545 31739318 ID=Msa0159980-mRNA-1:exon:10020;Parent=Msa0159980-mRNA-1
chr1_4 exon 31740857 31741021 31740857 ID=Msa0159980-mRNA-1:exon:10021;Parent=Msa0159980-mRNA-1
chr1_4 exon 31747981 31748049 31747981 ID=Msa0159980-mRNA-1:exon:10022;Parent=Msa0159980-mRNA-1
chr1_4 exon 31748157 31748485 31748157 ID=Msa0159980-mRNA-1:exon:10023;Parent=Msa0159980-mRNA-1
chr1_4 exon 31748836 31748924 31748836 ID=Msa0159980-mRNA-1:exon:10024;Parent=Msa0159980-mRNA-1
chr1_4 exon 31749032 31749165 31749032 ID=Msa0159980-mRNA-1:exon:10025;Parent=Msa0159980-mRNA-1
chr1_4 exon 31749252 31749722 31749252 ID=Msa0159980-mRNA-1:exon:10026;Parent=Msa0159980-mRNA-1
chr1_4 exon 31749869 31750751 31749869 ID=Msa0159980-mRNA-1:exon:10027;Parent=Msa0159980-mRNA-1
chr1_4 CDS 31736167 31736505 31736167 ID=Msa0159980-mRNA-1:cds;Parent=Msa0159980-mRNA-1
chr1_4 CDS 31736931 31737304 31736931 ID=Msa0159980-mRNA-1:cds;Parent=Msa0159980-mRNA-1
chr1_4 CDS 31737402 31737493 31737402 ID=Msa0159980-mRNA-1:cds;Parent=Msa0159980-mRNA-1
chr1_4 CDS 31737602 31737732 31737602 ID=Msa0159980-mRNA-1:cds;Parent=Msa0159980-mRNA-1
chr1_4 CDS 31739318 31739545 31739318 ID=Msa0159980-mRNA-1:cds;Parent=Msa0159980-mRNA-1
chr1_4 CDS 31740857 31741021 31740857 ID=Msa0159980-mRNA-1:cds;Parent=Msa0159980-mRNA-1
chr1_4 CDS 31747981 31748049 31747981 ID=Msa0159980-mRNA-1:cds;Parent=Msa0159980-mRNA-1
chr1_4 CDS 31748157 31748485 31748157 ID=Msa0159980-mRNA-1:cds;Parent=Msa0159980-mRNA-1
chr1_4 CDS 31748836 31748924 31748836 ID=Msa0159980-mRNA-1:cds;Parent=Msa0159980-mRNA-1
chr1_4 CDS 31749032 31749165 31749032 ID=Msa0159980-mRNA-1:cds;Parent=Msa0159980-mRNA-1
chr1_4 CDS 31749252 31749722 31749252 ID=Msa0159980-mRNA-1:cds;Parent=Msa0159980-mRNA-1
chr1_4 CDS 31749869 31750477 31749869 ID=Msa0159980-mRNA-1:cds;Parent=Msa0159980-mRNA-1
chr1_4 three_prime_UTR 31750478 31750751 31750478 ID=Msa0159980-mRNA-1:three_prime_utr;Parent=Msa0159980-mRNA-1
Gene Sequence

>Msa0159980

ATGCACCTAGCAGAAATTAAGCAAGGTGAGATAATTAATTTGCTAATTAATTACTTATATCAAATCTTATTAATTTCTACACAATTCATCACCATGTCCACTACATTGTCCAAAGATGTACCAATCAGTGGCACTGCAACCCAAAAGAATGGTACCTCCCAAGAACAGAAATCTCAGCTCCCTAATCCCTTTAAGCTTGAGGATATTAATATCCTTAACAAAGTTTATCTCACCCATGTCAAAGATAATGAGGAATATGATAAGGAAACCCTTTTCAAGCTTGTCTCCAACATCCTCTCTGCCTCAACTCAGATTTCTGGAACTAATTCTGCACTTAACACAACAATGTGGATTCTCCATCACCTCAGAGACTTCTCCTGGGAAGCAAAAGCATTGATAACTCTAGCTGCATTCTCTTTGGAGTATGGTGCAATTATGTATCTTAATAGGATTCAATCATCAGACACACTTGGAAACTCATTGAAGCAACTTAGCCAAGTTCAATTCAGAAAGGTTCCTGCTGATATAACTGATCTTGTCACATGCTTATTGGATGTGTTACAAGACATTAAACAGTGGGCAGACTGGTCTGCTTTCGGTTATGACTTGGACGATGTTGATTCTTTGCCTGATGCTATGCAATGGATTCCTCTTGTTGTGTATTGGACAGTTGCTACCATTGTTGCATGTACTGGTAACCTCGTCGGTATATCGGAGCATATATTATCAGATTATAAAAAAAGGCTCTCTCATGTGGTGGTTAATGAGTTGAGGCCTCGTTTGGAAAATTGCAGAGTGGAAATTGGGAATGTACACGCAAATGAAGATCGTCTGAAAGAGTCTGATAATATTAAAGATGTTGTTGCTTTCTTGAGACTTCTGCTCAAAGGCAAAGAAACTGATCAAATACCACCAATATTTATAGGCAACAACCAACTACCAGGGCGTGGGATAATAAAGAAAAAACTGAATTATGATATTGGTGGCGATCCTATTTTTGCAGTGATCAACCCTCAAGGTGTTATAATGAATGAGAATGCAAGGAAAATTATCTTTCAATGGGGAATCGATGCTTTTCCTTTTGGGATAAATGATGCTGAAGATATCTCCAAGAAATGGGAATGGTTTTGGAAGTTATTGAAGAAAGTAGATATCAATATTGAGTGGAAAAATAATGTGGTTGAGAAAGAAAGCTTTGATGAAGCTTTTCAGGAATATTATAAAACTAAGCTTACAGAGATGTCTTCTAGTGCTTCATGTGCTATTAATTCTTCAGATGTTCTTGCTACTATAACTTGTCCCAATCCTACTTGTGGACGTGTGATGGAGACAAGGCTAGCAGAAAGCAGGGCTGGTTTCGAGCCAGAATTTCGCACACTGAAGCTGATTTCTTGTCAGATGATAACCACGCCTCGTGGCGAACGCTATGTGCATCAAACAACAATGTGGATACTTCAACAGCTGAAAACCTATTCATGGGATGCAAAAGCACTTGTAGCCCTAGCTGCTTTCACTTTGGAATATGGAAATCTTTTGTACCTCACTGAGACTTCAACCTCATCAGATCAACTTGTTAACTCTTTGAAAACCCTGAATCAAATTCAAAACAGAAAGATCACTGTCCCTGTCACAGATTTGGTGGAGTTGATAATGGAAGTGCTTCTGCATATTCATGAGTGGGCCACTTGGTCTAGTGTTGGTTATGACACTCTTGATGTTCCTTCTTTGGACTATACACTATCAGATTTTAAAGACAAACTTAATTTTGTTGATTCTAAGTTGAAGGAACATCTGAAACTAATCAAATCACAAATAGATTCTGTTGAAGAATACTTGAAGCGCAAGAAAGCATTTTCCAATCCTAAAGATATTATAGATTTCTTGAAGCTTCTGATCCAACGCAATGGAGATAATCTCCTAATATATGATGGCACCACCAAAAACAAAACGGATATCAAAGTCTTCAAAGACAAATATGTGCTGTTGTTCATTTCAAGCCTCAACAAAGTTGACGATGAGATTCTGCTGTTAAATTCTATCCATGACAGATTGCAGGACAATCCACAAGAAGTGATAAGAGGTTACAAGAAAGAGGATTTCAAGATTTTGTGGATCCCCGTCTTTGACGATGACCAGAAGACCAAATTTGATTCTTTGAAGAATAAGATCAGATTTTATGCAGTGGATTACTCTTCTGAGTTACCTGGCATTAGACTCATAAGAGAGCATTTGAACTTTTGGGATAAGCCTATTGTCCCGGTGTTGGGCCCTTTAGGTGAAATAATGAATGATGATGCAATGGACTTGATTTTTCAATGGGGGATAGATGCACTCCCTTTTAGGAAACAAGATGGTTATGATCTTACTCAAAAATGGAAGTGGTTTTGGGATGTTACAAAGAGAGTGAATCTTGGAATACAGGTGAAAGGTGACAGATACATATTCATCTATGGAGGTAGTGACAAAAAATGGATCCAAGACTTCACCTTAGCATTGGAGAAAACAAAAAGGCATGAAACTATCTTAAGGGCAGATGCTATAATAGAACACTATCACTTGGGAAAAGATGACCCTAAGATTGTTCCTCGTTTTTGGATTGAAATAGAAAGCAAGAGACTCAAGAAACACCAAGATGCTATAGACTGTGAGATTCAAGATATTGTGAAGAGTTTGCTTTGTCTCAAACAAGATCCACAAGGTTGGGTTATTCTCACCAAAGGCTACAATGTTAAGCTTTTAGGGCATGGTGAGCCTATGTGTCAAACTTTGGTTGATTTTGATATATGGAAAGATAGAGTGCTACAAAAAGAAGGGTTTGATATTGCATTCAAAGAATATTATGAGACTGTTAAAGATACATATGCTAAGCAACCATGTGAAATGATCAATGTTGATAACAATATCAATGGAAATGTTATAGCTACTATATCATGCCCAAATCCTACTTGTGGACGTGTGATGGAGGTGACTTCTGTTAACTACAAGTGTTGCCACCGTGATGCTGCTGCTGCACAGAATGGCAAGATGTGA
Protein sequence

>Msa0159980

MHLAEIKQGEIINLLINYLYQILLISTQFITMSTTLSKDVPISGTATQKNGTSQEQKSQLPNPFKLEDINILNKVYLTHVKDNEEYDKETLFKLVSNILSASTQISGTNSALNTTMWILHHLRDFSWEAKALITLAAFSLEYGAIMYLNRIQSSDTLGNSLKQLSQVQFRKVPADITDLVTCLLDVLQDIKQWADWSAFGYDLDDVDSLPDAMQWIPLVVYWTVATIVACTGNLVGISEHILSDYKKRLSHVVVNELRPRLENCRVEIGNVHANEDRLKESDNIKDVVAFLRLLLKGKETDQIPPIFIGNNQLPGRGIIKKKLNYDIGGDPIFAVINPQGVIMNENARKIIFQWGIDAFPFGINDAEDISKKWEWFWKLLKKVDINIEWKNNVVEKESFDEAFQEYYKTKLTEMSSSASCAINSSDVLATITCPNPTCGRVMETRLAESRAGFEPEFRTLKLISCQMITTPRGERYVHQTTMWILQQLKTYSWDAKALVALAAFTLEYGNLLYLTETSTSSDQLVNSLKTLNQIQNRKITVPVTDLVELIMEVLLHIHEWATWSSVGYDTLDVPSLDYTLSDFKDKLNFVDSKLKEHLKLIKSQIDSVEEYLKRKKAFSNPKDIIDFLKLLIQRNGDNLLIYDGTTKNKTDIKVFKDKYVLLFISSLNKVDDEILLLNSIHDRLQDNPQEVIRGYKKEDFKILWIPVFDDDQKTKFDSLKNKIRFYAVDYSSELPGIRLIREHLNFWDKPIVPVLGPLGEIMNDDAMDLIFQWGIDALPFRKQDGYDLTQKWKWFWDVTKRVNLGIQVKGDRYIFIYGGSDKKWIQDFTLALEKTKRHETILRADAIIEHYHLGKDDPKIVPRFWIEIESKRLKKHQDAIDCEIQDIVKSLLCLKQDPQGWVILTKGYNVKLLGHGEPMCQTLVDFDIWKDRVLQKEGFDIAFKEYYETVKDTYAKQPCEMINVDNNINGNVIATISCPNPTCGRVMEVTSVNYKCCHRDAAAAQNGKM*