Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161970 | sp|Q9LZR0|ATB51_ARATH | 50.521 | 192 | 77 | 6 | 1 | 175 | 1 | 191 | 2.04e-47 | 157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161970 | G7I9C4 | 97.207 | 179 | 4 | 1 | 1 | 179 | 1 | 178 | 1.62e-121 | 352 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0161970 | TF | HB-HD-ZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025030 | Msa0161970 | 0.927121 | 1.827060e-91 | -8.615850e-47 |
| Msa0161970 | Msa1431280 | 0.971648 | 1.703904e-133 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161970 | MtrunA17_Chr1g0179581 | 97.297 | 111 | 2 | 1 | 32 | 142 | 1 | 110 | 1.63e-72 | 214 |
| Msa0161970 | MtrunA17_Chr7g0265521 | 63.243 | 185 | 56 | 5 | 1 | 181 | 1 | 177 | 1.42e-69 | 211 |
| Msa0161970 | MtrunA17_Chr6g0450991 | 55.882 | 102 | 38 | 1 | 59 | 153 | 66 | 167 | 6.90e-31 | 113 |
| Msa0161970 | MtrunA17_Chr6g0453021 | 55.670 | 97 | 43 | 0 | 54 | 150 | 90 | 186 | 3.69e-29 | 108 |
| Msa0161970 | MtrunA17_Chr4g0060031 | 54.808 | 104 | 40 | 1 | 49 | 145 | 84 | 187 | 6.80e-29 | 109 |
| Msa0161970 | MtrunA17_Chr8g0362151 | 55.670 | 97 | 36 | 1 | 57 | 146 | 74 | 170 | 8.02e-29 | 108 |
| Msa0161970 | MtrunA17_Chr5g0416391 | 56.180 | 89 | 39 | 0 | 59 | 147 | 76 | 164 | 2.71e-27 | 104 |
| Msa0161970 | MtrunA17_Chr3g0123691 | 48.148 | 108 | 49 | 1 | 55 | 155 | 55 | 162 | 9.30e-27 | 103 |
| Msa0161970 | MtrunA17_Chr8g0381741 | 46.957 | 115 | 51 | 2 | 48 | 152 | 39 | 153 | 3.74e-26 | 101 |
| Msa0161970 | MtrunA17_Chr5g0415941 | 58.427 | 89 | 37 | 0 | 58 | 146 | 85 | 173 | 3.85e-26 | 102 |
| Msa0161970 | MtrunA17_Chr8g0362751 | 53.608 | 97 | 38 | 1 | 60 | 149 | 89 | 185 | 6.48e-26 | 100 |
| Msa0161970 | MtrunA17_Chr3g0119291 | 48.649 | 111 | 57 | 0 | 59 | 169 | 58 | 168 | 1.13e-25 | 99.4 |
| Msa0161970 | MtrunA17_Chr3g0127511 | 49.038 | 104 | 45 | 2 | 62 | 158 | 40 | 142 | 1.90e-25 | 98.6 |
| Msa0161970 | MtrunA17_Chr7g0217111 | 46.763 | 139 | 55 | 4 | 17 | 147 | 47 | 174 | 2.33e-25 | 99.0 |
| Msa0161970 | MtrunA17_Chr8g0346251 | 47.872 | 94 | 42 | 1 | 64 | 150 | 45 | 138 | 5.30e-23 | 92.0 |
| Msa0161970 | MtrunA17_Chr5g0403701 | 43.396 | 106 | 60 | 0 | 55 | 160 | 48 | 153 | 3.68e-20 | 84.0 |
| Msa0161970 | MtrunA17_Chr4g0055851 | 39.200 | 125 | 66 | 2 | 60 | 183 | 120 | 235 | 1.27e-19 | 84.0 |
| Msa0161970 | MtrunA17_Chr4g0054421 | 48.315 | 89 | 46 | 0 | 60 | 148 | 127 | 215 | 2.53e-19 | 82.8 |
| Msa0161970 | MtrunA17_Chr7g0258831 | 46.067 | 89 | 48 | 0 | 60 | 148 | 160 | 248 | 6.52e-19 | 82.0 |
| Msa0161970 | MtrunA17_Chr5g0399491 | 40.000 | 125 | 65 | 2 | 60 | 183 | 136 | 251 | 1.52e-18 | 81.3 |
| Msa0161970 | MtrunA17_Chr1g0151971 | 43.119 | 109 | 55 | 2 | 47 | 148 | 110 | 218 | 2.06e-18 | 80.5 |
| Msa0161970 | MtrunA17_Chr1g0175651 | 44.944 | 89 | 49 | 0 | 60 | 148 | 154 | 242 | 5.59e-18 | 79.7 |
| Msa0161970 | MtrunA17_Chr5g0403691 | 41.593 | 113 | 59 | 1 | 55 | 160 | 48 | 160 | 7.76e-18 | 77.8 |
| Msa0161970 | MtrunA17_Chr1g0179591 | 83.721 | 43 | 7 | 0 | 137 | 179 | 33 | 75 | 1.04e-17 | 75.5 |
| Msa0161970 | MtrunA17_Chr8g0335131 | 46.067 | 89 | 48 | 0 | 60 | 148 | 146 | 234 | 3.05e-17 | 77.8 |
| Msa0161970 | MtrunA17_Chr2g0308611 | 43.820 | 89 | 50 | 0 | 60 | 148 | 200 | 288 | 3.81e-17 | 77.8 |
| Msa0161970 | MtrunA17_Chr4g0044091 | 44.681 | 94 | 52 | 0 | 55 | 148 | 60 | 153 | 7.87e-17 | 74.7 |
| Msa0161970 | MtrunA17_Chr4g0071411 | 45.349 | 86 | 47 | 0 | 63 | 148 | 91 | 176 | 1.70e-16 | 74.3 |
| Msa0161970 | MtrunA17_Chr5g0400781 | 43.820 | 89 | 50 | 0 | 60 | 148 | 123 | 211 | 4.54e-16 | 73.9 |
| Msa0161970 | MtrunA17_Chr3g0135331 | 43.820 | 89 | 50 | 0 | 60 | 148 | 145 | 233 | 1.42e-14 | 70.5 |
| Msa0161970 | MtrunA17_Chr2g0299031 | 42.697 | 89 | 51 | 0 | 60 | 148 | 82 | 170 | 1.57e-13 | 66.2 |
| Msa0161970 | MtrunA17_Chr2g0331581 | 39.024 | 82 | 50 | 0 | 63 | 144 | 145 | 226 | 2.75e-11 | 61.6 |
| Msa0161970 | MtrunA17_Chr5g0410711 | 34.783 | 115 | 62 | 3 | 53 | 156 | 74 | 186 | 6.72e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161970 | AT5G03790.1 | 50.521 | 192 | 77 | 6 | 1 | 175 | 1 | 191 | 2.08e-48 | 157 |
| Msa0161970 | AT5G03790.2 | 53.086 | 162 | 59 | 5 | 1 | 145 | 1 | 162 | 7.66e-43 | 142 |
| Msa0161970 | AT2G36610.1 | 48.603 | 179 | 66 | 7 | 7 | 162 | 5 | 180 | 1.68e-41 | 138 |
| Msa0161970 | AT4G40060.1 | 41.509 | 159 | 82 | 3 | 28 | 177 | 29 | 185 | 1.65e-31 | 115 |
| Msa0161970 | AT5G15150.1 | 61.290 | 93 | 36 | 0 | 57 | 149 | 112 | 204 | 2.84e-29 | 110 |
| Msa0161970 | AT5G65310.1 | 41.667 | 144 | 72 | 4 | 12 | 151 | 28 | 163 | 5.04e-29 | 109 |
| Msa0161970 | AT5G65310.2 | 41.667 | 144 | 72 | 4 | 12 | 151 | 10 | 145 | 5.46e-29 | 109 |
| Msa0161970 | AT1G69780.1 | 58.242 | 91 | 38 | 0 | 57 | 147 | 82 | 172 | 1.12e-28 | 108 |
| Msa0161970 | AT2G22430.1 | 53.465 | 101 | 40 | 1 | 56 | 149 | 58 | 158 | 2.32e-28 | 108 |
| Msa0161970 | AT2G46680.1 | 49.541 | 109 | 48 | 1 | 45 | 146 | 17 | 125 | 8.83e-28 | 105 |
| Msa0161970 | AT3G01470.1 | 47.414 | 116 | 54 | 1 | 57 | 165 | 65 | 180 | 9.49e-28 | 105 |
| Msa0161970 | AT2G46680.2 | 49.533 | 107 | 47 | 1 | 45 | 144 | 17 | 123 | 5.76e-27 | 103 |
| Msa0161970 | AT3G01220.1 | 52.294 | 109 | 45 | 1 | 57 | 158 | 84 | 192 | 7.67e-27 | 103 |
| Msa0161970 | AT3G61890.1 | 45.763 | 118 | 53 | 2 | 63 | 169 | 33 | 150 | 1.60e-25 | 99.0 |
| Msa0161970 | AT1G26960.1 | 54.839 | 93 | 42 | 0 | 57 | 149 | 68 | 160 | 1.91e-25 | 99.0 |
| Msa0161970 | AT2G18550.1 | 40.157 | 127 | 72 | 1 | 55 | 177 | 56 | 182 | 7.89e-25 | 96.7 |
| Msa0161970 | AT4G36740.2 | 50.526 | 95 | 47 | 0 | 55 | 149 | 51 | 145 | 1.20e-24 | 96.3 |
| Msa0161970 | AT4G36740.1 | 50.526 | 95 | 47 | 0 | 55 | 149 | 50 | 144 | 1.27e-24 | 95.9 |
| Msa0161970 | AT1G27045.5 | 48.039 | 102 | 46 | 1 | 60 | 154 | 25 | 126 | 4.49e-22 | 88.6 |
| Msa0161970 | AT1G27045.3 | 48.039 | 102 | 46 | 1 | 60 | 154 | 25 | 126 | 4.49e-22 | 88.6 |
| Msa0161970 | AT5G66700.1 | 48.913 | 92 | 47 | 0 | 60 | 151 | 71 | 162 | 5.31e-22 | 89.4 |
| Msa0161970 | AT1G27045.2 | 48.039 | 102 | 46 | 1 | 60 | 154 | 17 | 118 | 5.46e-22 | 88.2 |
| Msa0161970 | AT1G27045.1 | 48.039 | 102 | 46 | 1 | 60 | 154 | 68 | 169 | 6.03e-22 | 89.4 |
| Msa0161970 | AT1G27045.4 | 42.857 | 112 | 56 | 2 | 60 | 169 | 68 | 173 | 2.77e-20 | 85.5 |
| Msa0161970 | AT4G16780.1 | 38.636 | 132 | 71 | 2 | 55 | 185 | 124 | 246 | 4.73e-20 | 85.5 |
| Msa0161970 | AT5G06710.1 | 44.944 | 89 | 49 | 0 | 60 | 148 | 190 | 278 | 2.71e-17 | 78.6 |
| Msa0161970 | AT5G53980.1 | 44.211 | 95 | 53 | 0 | 60 | 154 | 11 | 105 | 3.47e-17 | 75.1 |
| Msa0161970 | AT4G17460.1 | 41.489 | 94 | 55 | 0 | 55 | 148 | 130 | 223 | 8.44e-17 | 76.6 |
| Msa0161970 | AT3G60390.1 | 46.067 | 89 | 48 | 0 | 60 | 148 | 162 | 250 | 8.89e-17 | 77.0 |
| Msa0161970 | AT2G01430.1 | 48.315 | 89 | 46 | 0 | 60 | 148 | 139 | 227 | 1.36e-16 | 75.9 |
| Msa0161970 | AT2G22800.1 | 42.553 | 94 | 54 | 0 | 55 | 148 | 108 | 201 | 1.70e-16 | 75.5 |
| Msa0161970 | AT4G37790.1 | 42.553 | 94 | 54 | 0 | 55 | 148 | 121 | 214 | 2.59e-16 | 75.1 |
| Msa0161970 | AT2G44910.1 | 42.697 | 89 | 51 | 0 | 60 | 148 | 163 | 251 | 1.15e-15 | 73.9 |
| Msa0161970 | AT5G47370.1 | 31.973 | 147 | 91 | 2 | 11 | 148 | 72 | 218 | 1.48e-15 | 73.2 |
| Msa0161970 | AT1G70920.2 | 41.489 | 94 | 55 | 0 | 55 | 148 | 34 | 127 | 1.36e-12 | 63.5 |
| Msa0161970 | AT1G70920.1 | 41.489 | 94 | 55 | 0 | 55 | 148 | 64 | 157 | 1.90e-12 | 63.5 |
| Msa0161970 | AT5G06710.4 | 53.846 | 52 | 24 | 0 | 60 | 111 | 190 | 241 | 4.74e-12 | 63.5 |
| Msa0161970 | AT3G61150.1 | 35.897 | 117 | 64 | 5 | 57 | 170 | 108 | 216 | 1.03e-11 | 63.2 |
| Msa0161970 | AT2G01430.2 | 56.604 | 53 | 23 | 0 | 60 | 112 | 139 | 191 | 1.15e-11 | 61.6 |
| Msa0161970 | AT1G79840.5 | 30.597 | 134 | 83 | 3 | 53 | 184 | 95 | 220 | 1.93e-11 | 62.4 |
| Msa0161970 | AT1G79840.2 | 30.597 | 134 | 83 | 3 | 53 | 184 | 124 | 249 | 2.42e-11 | 62.0 |
| Msa0161970 | AT1G79840.4 | 30.597 | 134 | 83 | 3 | 53 | 184 | 95 | 220 | 2.45e-11 | 62.0 |
| Msa0161970 | AT1G79840.1 | 30.597 | 134 | 83 | 3 | 53 | 184 | 95 | 220 | 2.66e-11 | 62.0 |
| Msa0161970 | AT1G79840.3 | 30.597 | 134 | 83 | 3 | 53 | 184 | 37 | 162 | 3.14e-11 | 62.0 |
| Msa0161970 | AT1G79840.6 | 30.597 | 134 | 83 | 3 | 53 | 184 | 37 | 162 | 3.14e-11 | 62.0 |
Find 38 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACCTAGCACGCCTATTT+TGG | 0.156053 | 1_4:-38123973 | None:intergenic |
| TTGCTATTTGGTTCCAAAAT+AGG | 0.158232 | 1_4:+38123960 | Msa0161970:CDS |
| AGCCTCGTCAAATTGCTATT+TGG | 0.235729 | 1_4:+38123948 | Msa0161970:CDS |
| CCTTGGACACAACCTCAAAT+TGG | 0.274196 | 1_4:-38124036 | None:intergenic |
| ATGAAGCTTTCCAAGGAGTT+AGG | 0.302805 | 1_4:+38123920 | Msa0161970:CDS |
| CTTTCCCTTCACCTCTCTGT+TGG | 0.348637 | 1_4:-38125449 | None:intergenic |
| GAAAGCTTCATCTTCCTTTG+AGG | 0.362313 | 1_4:-38123908 | None:intergenic |
| AGATACAATGTTCCCAGAAA+TGG | 0.367312 | 1_4:+38123781 | Msa0161970:CDS |
| AAAGCTTCATCTTCCTTTGA+GGG | 0.383872 | 1_4:-38123907 | None:intergenic |
| GTAGTTGTAGAGGAAGCTTA+AGG | 0.434188 | 1_4:-38123351 | None:intergenic |
| TGAAGCTTTCCAAGGAGTTA+GGG | 0.476348 | 1_4:+38123921 | Msa0161970:CDS |
| CCAATTTGAGGTTGTGTCCA+AGG | 0.478928 | 1_4:+38124036 | Msa0161970:CDS |
| TGGAAGTGAAACAGCAAGAC+TGG | 0.490760 | 1_4:+38123756 | Msa0161970:CDS |
| ATACAAGTGTTCAAGTTGCT+TGG | 0.493063 | 1_4:-38123999 | None:intergenic |
| AGGCTGTAGCCCTAACTCCT+TGG | 0.496406 | 1_4:-38123930 | None:intergenic |
| TGTTCAGGTTGTGAAGTTGA+AGG | 0.499837 | 1_4:+38125313 | Msa0161970:intron |
| TTTACTTAGACACCAATTTG+AGG | 0.500502 | 1_4:+38124024 | Msa0161970:CDS |
| GTGTGTTTGTTAAGGAATGA+TGG | 0.508746 | 1_4:+38123736 | Msa0161970:intron |
| GGTTCCAAAATAGGCGTGCT+AGG | 0.516451 | 1_4:+38123969 | Msa0161970:CDS |
| TACAACCAATGCTCATATCA+AGG | 0.516637 | 1_4:+38123371 | Msa0161970:CDS |
| AAAACAGCAGCTTCAGGATG+AGG | 0.518698 | 1_4:+38124060 | Msa0161970:CDS |
| AGCATTGGTTGTAGTTGTAG+AGG | 0.525273 | 1_4:-38123361 | None:intergenic |
| TAGATAATTATGGAATGGAA+TGG | 0.526946 | 1_4:+38123293 | None:intergenic |
| AACTCTTGTGGTAGAATGCA+AGG | 0.527714 | 1_4:+38125356 | Msa0161970:CDS |
| GAGTGAACAGATGGAATCAC+TGG | 0.535577 | 1_4:+38123853 | Msa0161970:CDS |
| GCGATTAACGAGTGAACAGA+TGG | 0.542500 | 1_4:+38123844 | Msa0161970:CDS |
| ACAGATAGATAATTATGGAA+TGG | 0.549629 | 1_4:+38123288 | None:intergenic |
| CTTAAGGAAGACTCTGGTTG+AGG | 0.556116 | 1_4:-38123335 | None:intergenic |
| TTGCTCCAACAGAGAGGTGA+AGG | 0.556685 | 1_4:+38125444 | Msa0161970:CDS |
| AGATCAAACTAGACCCTCAA+AGG | 0.558248 | 1_4:+38123894 | Msa0161970:CDS |
| AAAGAACAAGGTAACTCTTG+TGG | 0.599344 | 1_4:+38125344 | Msa0161970:CDS |
| AGGAAGCTTAAGGAAGACTC+TGG | 0.609695 | 1_4:-38123341 | None:intergenic |
| AAGGAAGATGAAGCTTTCCA+AGG | 0.615641 | 1_4:+38123913 | Msa0161970:CDS |
| AAGGCTATGTTGAAAGAACA+AGG | 0.632753 | 1_4:+38125332 | Msa0161970:CDS |
| TCCAAAATAGGCGTGCTAGG+TGG | 0.637372 | 1_4:+38123972 | Msa0161970:CDS |
| TTACTATACAGAAATGTCAG+TGG | 0.650416 | 1_4:+38125379 | Msa0161970:CDS |
| AACCAAATAGCAATTTGACG+AGG | 0.698239 | 1_4:-38123950 | None:intergenic |
| TCTACGTTGCTCCAACAGAG+AGG | 0.709736 | 1_4:+38125438 | Msa0161970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCATAAGTTTAAATATA+GGG | - | chr1_4:38123492-38123511 | None:intergenic | 10.0% |
| !! | TTAATCATAAGTTTAAATAT+AGG | - | chr1_4:38123493-38123512 | None:intergenic | 10.0% |
| !!! | TGTTATTTTAAATAATCAAA+TGG | + | chr1_4:38124294-38124313 | Msa0161970:intron | 10.0% |
| !! | AGAGAAAAATAAATTATTTA+AGG | + | chr1_4:38124437-38124456 | Msa0161970:intron | 10.0% |
| !! | TAATCATAAGTTTAAATATA+GGG | - | chr1_4:38123492-38123511 | None:intergenic | 10.0% |
| !! | TTAATCATAAGTTTAAATAT+AGG | - | chr1_4:38123493-38123512 | None:intergenic | 10.0% |
| !!! | TGTTATTTTAAATAATCAAA+TGG | + | chr1_4:38124294-38124313 | Msa0161970:intron | 10.0% |
| !! | AGAGAAAAATAAATTATTTA+AGG | + | chr1_4:38124437-38124456 | Msa0161970:intron | 10.0% |
| !!! | TTTTTTTCTTCTTCTATATA+TGG | + | chr1_4:38123549-38123568 | Msa0161970:intron | 15.0% |
| !! | ACAATATTGTTTAAAAGTTT+AGG | - | chr1_4:38123716-38123735 | None:intergenic | 15.0% |
| !!! | ATAATTTATTTTTCTCTTCT+TGG | - | chr1_4:38124434-38124453 | None:intergenic | 15.0% |
| !! | TACGTAAAAAAAATCTAAAA+TGG | + | chr1_4:38124522-38124541 | Msa0161970:intron | 15.0% |
| !!! | GAAGTATATGTTTTTATTTT+CGG | + | chr1_4:38124629-38124648 | Msa0161970:intron | 15.0% |
| !!! | TCTTCTCTTATTTATATTAT+TGG | + | chr1_4:38124979-38124998 | Msa0161970:intron | 15.0% |
| !! | TATTAAATATTAAAGTAGCA+TGG | - | chr1_4:38125180-38125199 | None:intergenic | 15.0% |
| !! | AAAGTAAAATAGAGTTTAAT+TGG | + | chr1_4:38125209-38125228 | Msa0161970:intron | 15.0% |
| !!! | ATTTATATATGTAATTTGCA+TGG | - | chr1_4:38125282-38125301 | None:intergenic | 15.0% |
| !!! | TTTTTTTCTTCTTCTATATA+TGG | + | chr1_4:38123549-38123568 | Msa0161970:intron | 15.0% |
| !! | ACAATATTGTTTAAAAGTTT+AGG | - | chr1_4:38123716-38123735 | None:intergenic | 15.0% |
| !!! | ATAATTTATTTTTCTCTTCT+TGG | - | chr1_4:38124434-38124453 | None:intergenic | 15.0% |
| !! | TACGTAAAAAAAATCTAAAA+TGG | + | chr1_4:38124522-38124541 | Msa0161970:intron | 15.0% |
| !!! | GAAGTATATGTTTTTATTTT+CGG | + | chr1_4:38124629-38124648 | Msa0161970:intron | 15.0% |
| !!! | TCTTCTCTTATTTATATTAT+TGG | + | chr1_4:38124979-38124998 | Msa0161970:intron | 15.0% |
| !! | TATTAAATATTAAAGTAGCA+TGG | - | chr1_4:38125180-38125199 | None:intergenic | 15.0% |
| !! | AAAGTAAAATAGAGTTTAAT+TGG | + | chr1_4:38125209-38125228 | Msa0161970:intron | 15.0% |
| !!! | ATTTATATATGTAATTTGCA+TGG | - | chr1_4:38125282-38125301 | None:intergenic | 15.0% |
| !!! | ATTACATTCTAGAAGTTATT+AGG | - | chr1_4:38123462-38123481 | None:intergenic | 20.0% |
| !! | AGAAAAAAACTATATATGCA+TGG | - | chr1_4:38123538-38123557 | None:intergenic | 20.0% |
| !! | ATTCAAAATTTACGTATGTT+TGG | + | chr1_4:38123597-38123616 | Msa0161970:intron | 20.0% |
| !! | TCATTCTCATATATTATTAC+CGG | + | chr1_4:38123673-38123692 | Msa0161970:intron | 20.0% |
| !! | TAAATAGAGAAATACTTACA+TGG | - | chr1_4:38124364-38124383 | None:intergenic | 20.0% |
| !! | ATCGAAAACGTATAAATATA+TGG | + | chr1_4:38124482-38124501 | Msa0161970:intron | 20.0% |
| !!! | TAAATATATGGTGTTGATAT+TGG | + | chr1_4:38124494-38124513 | Msa0161970:intron | 20.0% |
| !!! | AAATATATGGTGTTGATATT+GGG | + | chr1_4:38124495-38124514 | Msa0161970:intron | 20.0% |
| !!! | TTATTTTGTCATAATCCTTA+CGG | + | chr1_4:38124556-38124575 | Msa0161970:intron | 20.0% |
| !! | TATATCAATGACTTATATTG+AGG | - | chr1_4:38124716-38124735 | None:intergenic | 20.0% |
| !!! | ATTACAATGTGTTATTTTAG+TGG | + | chr1_4:38124780-38124799 | Msa0161970:intron | 20.0% |
| !!! | ATTACATTCTAGAAGTTATT+AGG | - | chr1_4:38123462-38123481 | None:intergenic | 20.0% |
| !! | AGAAAAAAACTATATATGCA+TGG | - | chr1_4:38123538-38123557 | None:intergenic | 20.0% |
| !! | ATTCAAAATTTACGTATGTT+TGG | + | chr1_4:38123597-38123616 | Msa0161970:intron | 20.0% |
| !! | TCATTCTCATATATTATTAC+CGG | + | chr1_4:38123673-38123692 | Msa0161970:intron | 20.0% |
| !! | TAAATAGAGAAATACTTACA+TGG | - | chr1_4:38124364-38124383 | None:intergenic | 20.0% |
| !! | ATCGAAAACGTATAAATATA+TGG | + | chr1_4:38124482-38124501 | Msa0161970:intron | 20.0% |
| !!! | TAAATATATGGTGTTGATAT+TGG | + | chr1_4:38124494-38124513 | Msa0161970:intron | 20.0% |
| !!! | AAATATATGGTGTTGATATT+GGG | + | chr1_4:38124495-38124514 | Msa0161970:intron | 20.0% |
| !!! | TTATTTTGTCATAATCCTTA+CGG | + | chr1_4:38124556-38124575 | Msa0161970:intron | 20.0% |
| !! | TATATCAATGACTTATATTG+AGG | - | chr1_4:38124716-38124735 | None:intergenic | 20.0% |
| !!! | ATTACAATGTGTTATTTTAG+TGG | + | chr1_4:38124780-38124799 | Msa0161970:intron | 20.0% |
| ! | AAAAACTATATATGCATGGT+TGG | - | chr1_4:38123534-38123553 | None:intergenic | 25.0% |
| ! | TATATGGCATATATATAGCT+TGG | + | chr1_4:38123565-38123584 | Msa0161970:intron | 25.0% |
| !! | AATATTGTGTGTGTTTGTTA+AGG | + | chr1_4:38123728-38123747 | Msa0161970:intron | 25.0% |
| !!! | TCATCATTTTTTCCATTTCT+GGG | - | chr1_4:38123796-38123815 | None:intergenic | 25.0% |
| !!! | TTCATCATTTTTTCCATTTC+TGG | - | chr1_4:38123797-38123816 | None:intergenic | 25.0% |
| ! | ATGGAAAAAATGATGAAGTA+TGG | + | chr1_4:38123800-38123819 | Msa0161970:CDS | 25.0% |
| ! | TGGAAAAAATGATGAAGTAT+GGG | + | chr1_4:38123801-38123820 | Msa0161970:CDS | 25.0% |
| ! | TTTACCTTCTCATTGAAATT+TGG | - | chr1_4:38124586-38124605 | None:intergenic | 25.0% |
| ! | AATGAAGGCAAAATATAGTT+TGG | + | chr1_4:38124659-38124678 | Msa0161970:intron | 25.0% |
| !! | GTAAGTTGGAGTAATATATT+TGG | - | chr1_4:38124689-38124708 | None:intergenic | 25.0% |
| ! | ATAAATTTATTCTAACGGTC+TGG | + | chr1_4:38124738-38124757 | Msa0161970:intron | 25.0% |
| !!! | TTATTTTAGTGGTGTAAGTT+GGG | + | chr1_4:38124791-38124810 | Msa0161970:intron | 25.0% |
| ! | TTTATGAGTTTATGGATTCA+CGG | - | chr1_4:38124947-38124966 | None:intergenic | 25.0% |
| ! | TGATCAACTTTATGAGTTTA+TGG | - | chr1_4:38124955-38124974 | None:intergenic | 25.0% |
| ! | ACACATACATACATACATAT+TGG | - | chr1_4:38125070-38125089 | None:intergenic | 25.0% |
| ! | AAAAACTATATATGCATGGT+TGG | - | chr1_4:38123534-38123553 | None:intergenic | 25.0% |
| ! | TATATGGCATATATATAGCT+TGG | + | chr1_4:38123565-38123584 | Msa0161970:intron | 25.0% |
| !! | AATATTGTGTGTGTTTGTTA+AGG | + | chr1_4:38123728-38123747 | Msa0161970:intron | 25.0% |
| !!! | TCATCATTTTTTCCATTTCT+GGG | - | chr1_4:38123796-38123815 | None:intergenic | 25.0% |
| !!! | TTCATCATTTTTTCCATTTC+TGG | - | chr1_4:38123797-38123816 | None:intergenic | 25.0% |
| ! | ATGGAAAAAATGATGAAGTA+TGG | + | chr1_4:38123800-38123819 | Msa0161970:CDS | 25.0% |
| ! | TGGAAAAAATGATGAAGTAT+GGG | + | chr1_4:38123801-38123820 | Msa0161970:CDS | 25.0% |
| ! | TTTACCTTCTCATTGAAATT+TGG | - | chr1_4:38124586-38124605 | None:intergenic | 25.0% |
| ! | AATGAAGGCAAAATATAGTT+TGG | + | chr1_4:38124659-38124678 | Msa0161970:intron | 25.0% |
| !! | GTAAGTTGGAGTAATATATT+TGG | - | chr1_4:38124689-38124708 | None:intergenic | 25.0% |
| ! | ATAAATTTATTCTAACGGTC+TGG | + | chr1_4:38124738-38124757 | Msa0161970:intron | 25.0% |
| !!! | TTATTTTAGTGGTGTAAGTT+GGG | + | chr1_4:38124791-38124810 | Msa0161970:intron | 25.0% |
| ! | TTTATGAGTTTATGGATTCA+CGG | - | chr1_4:38124947-38124966 | None:intergenic | 25.0% |
| ! | TGATCAACTTTATGAGTTTA+TGG | - | chr1_4:38124955-38124974 | None:intergenic | 25.0% |
| ! | ACACATACATACATACATAT+TGG | - | chr1_4:38125070-38125089 | None:intergenic | 25.0% |
| ! | TTTTACCTTGATATGAGCAT+TGG | - | chr1_4:38123379-38123398 | None:intergenic | 30.0% |
| !! | TTGCTATTTGGTTCCAAAAT+AGG | + | chr1_4:38123960-38123979 | Msa0161970:CDS | 30.0% |
| TTTACTTAGACACCAATTTG+AGG | + | chr1_4:38124024-38124043 | Msa0161970:CDS | 30.0% | |
| GTCAATGAACAATACCTAAA+TGG | + | chr1_4:38124170-38124189 | Msa0161970:intron | 30.0% | |
| GAACAATACCTAAATGGTTA+CGG | + | chr1_4:38124176-38124195 | Msa0161970:intron | 30.0% | |
| CAAGCGCAAATAACTTTATT+TGG | + | chr1_4:38124222-38124241 | Msa0161970:intron | 30.0% | |
| AGTATTTGTGTGTGTCTAAA+TGG | + | chr1_4:38124319-38124338 | Msa0161970:intron | 30.0% | |
| ! | GTCTAAATGGATTTCATTTG+TGG | + | chr1_4:38124332-38124351 | Msa0161970:intron | 30.0% |
| TAGTCCAAATTTCAATGAGA+AGG | + | chr1_4:38124579-38124598 | Msa0161970:intron | 30.0% | |
| ! | ATTTTCGGTGAACTTAATGA+AGG | + | chr1_4:38124644-38124663 | Msa0161970:intron | 30.0% |
| AGTTGGAGTAATATATTTGG+TGG | - | chr1_4:38124686-38124705 | None:intergenic | 30.0% | |
| ATCAATGACTTATATTGAGG+TGG | - | chr1_4:38124713-38124732 | None:intergenic | 30.0% | |
| !!! | GTTATTTTAGTGGTGTAAGT+TGG | + | chr1_4:38124790-38124809 | Msa0161970:intron | 30.0% |
| !!! | TATTTTAGTGGTGTAAGTTG+GGG | + | chr1_4:38124792-38124811 | Msa0161970:intron | 30.0% |
| TGTCACCATGATTTCATTAA+GGG | - | chr1_4:38124849-38124868 | None:intergenic | 30.0% | |
| TTACTATACAGAAATGTCAG+TGG | + | chr1_4:38125379-38125398 | Msa0161970:CDS | 30.0% | |
| ! | TTTTACCTTGATATGAGCAT+TGG | - | chr1_4:38123379-38123398 | None:intergenic | 30.0% |
| !! | TTGCTATTTGGTTCCAAAAT+AGG | + | chr1_4:38123960-38123979 | Msa0161970:CDS | 30.0% |
| TTTACTTAGACACCAATTTG+AGG | + | chr1_4:38124024-38124043 | Msa0161970:CDS | 30.0% | |
| GTCAATGAACAATACCTAAA+TGG | + | chr1_4:38124170-38124189 | Msa0161970:intron | 30.0% | |
| GAACAATACCTAAATGGTTA+CGG | + | chr1_4:38124176-38124195 | Msa0161970:intron | 30.0% | |
| CAAGCGCAAATAACTTTATT+TGG | + | chr1_4:38124222-38124241 | Msa0161970:intron | 30.0% | |
| AGTATTTGTGTGTGTCTAAA+TGG | + | chr1_4:38124319-38124338 | Msa0161970:intron | 30.0% | |
| ! | GTCTAAATGGATTTCATTTG+TGG | + | chr1_4:38124332-38124351 | Msa0161970:intron | 30.0% |
| TAGTCCAAATTTCAATGAGA+AGG | + | chr1_4:38124579-38124598 | Msa0161970:intron | 30.0% | |
| ! | ATTTTCGGTGAACTTAATGA+AGG | + | chr1_4:38124644-38124663 | Msa0161970:intron | 30.0% |
| AGTTGGAGTAATATATTTGG+TGG | - | chr1_4:38124686-38124705 | None:intergenic | 30.0% | |
| ATCAATGACTTATATTGAGG+TGG | - | chr1_4:38124713-38124732 | None:intergenic | 30.0% | |
| !!! | GTTATTTTAGTGGTGTAAGT+TGG | + | chr1_4:38124790-38124809 | Msa0161970:intron | 30.0% |
| !!! | TATTTTAGTGGTGTAAGTTG+GGG | + | chr1_4:38124792-38124811 | Msa0161970:intron | 30.0% |
| TGTCACCATGATTTCATTAA+GGG | - | chr1_4:38124849-38124868 | None:intergenic | 30.0% | |
| TTACTATACAGAAATGTCAG+TGG | + | chr1_4:38125379-38125398 | Msa0161970:CDS | 30.0% | |
| TACAACCAATGCTCATATCA+AGG | + | chr1_4:38123371-38123390 | Msa0161970:CDS | 35.0% | |
| ACACACGTAACTACATACAA+TGG | + | chr1_4:38123647-38123666 | Msa0161970:intron | 35.0% | |
| TATTACCGGTGTCTACATAT+CGG | + | chr1_4:38123687-38123706 | Msa0161970:intron | 35.0% | |
| ! | GTGTGTTTGTTAAGGAATGA+TGG | + | chr1_4:38123736-38123755 | Msa0161970:intron | 35.0% |
| AGATACAATGTTCCCAGAAA+TGG | + | chr1_4:38123781-38123800 | Msa0161970:CDS | 35.0% | |
| AAAGCTTCATCTTCCTTTGA+GGG | - | chr1_4:38123910-38123929 | None:intergenic | 35.0% | |
| AACCAAATAGCAATTTGACG+AGG | - | chr1_4:38123953-38123972 | None:intergenic | 35.0% | |
| !! | ATACAAGTGTTCAAGTTGCT+TGG | - | chr1_4:38124002-38124021 | None:intergenic | 35.0% |
| TTATTTGGCGCATACACAAA+TGG | + | chr1_4:38124237-38124256 | Msa0161970:intron | 35.0% | |
| CGTCTACACTTATTCGTATA+TGG | - | chr1_4:38124405-38124424 | None:intergenic | 35.0% | |
| ATACGAATAAGTGTAGACGT+CGG | + | chr1_4:38124406-38124425 | Msa0161970:intron | 35.0% | |
| TTGAAATTTGGACTACCGTA+AGG | - | chr1_4:38124574-38124593 | None:intergenic | 35.0% | |
| TATATTGAGGTGGTGTAAGT+TGG | - | chr1_4:38124703-38124722 | None:intergenic | 35.0% | |
| TGACACCCTTAATGAAATCA+TGG | + | chr1_4:38124841-38124860 | Msa0161970:intron | 35.0% | |
| GTGTCACCATGATTTCATTA+AGG | - | chr1_4:38124850-38124869 | None:intergenic | 35.0% | |
| !! | AAATTTGTTGTTCCCTGTTC+AGG | + | chr1_4:38125298-38125317 | Msa0161970:intron | 35.0% |
| AAGGCTATGTTGAAAGAACA+AGG | + | chr1_4:38125332-38125351 | Msa0161970:CDS | 35.0% | |
| AAAGAACAAGGTAACTCTTG+TGG | + | chr1_4:38125344-38125363 | Msa0161970:CDS | 35.0% | |
| TACAACCAATGCTCATATCA+AGG | + | chr1_4:38123371-38123390 | Msa0161970:CDS | 35.0% | |
| ACACACGTAACTACATACAA+TGG | + | chr1_4:38123647-38123666 | Msa0161970:intron | 35.0% | |
| TATTACCGGTGTCTACATAT+CGG | + | chr1_4:38123687-38123706 | Msa0161970:intron | 35.0% | |
| ! | GTGTGTTTGTTAAGGAATGA+TGG | + | chr1_4:38123736-38123755 | Msa0161970:intron | 35.0% |
| AGATACAATGTTCCCAGAAA+TGG | + | chr1_4:38123781-38123800 | Msa0161970:CDS | 35.0% | |
| AAAGCTTCATCTTCCTTTGA+GGG | - | chr1_4:38123910-38123929 | None:intergenic | 35.0% | |
| AACCAAATAGCAATTTGACG+AGG | - | chr1_4:38123953-38123972 | None:intergenic | 35.0% | |
| !! | ATACAAGTGTTCAAGTTGCT+TGG | - | chr1_4:38124002-38124021 | None:intergenic | 35.0% |
| TTATTTGGCGCATACACAAA+TGG | + | chr1_4:38124237-38124256 | Msa0161970:intron | 35.0% | |
| CGTCTACACTTATTCGTATA+TGG | - | chr1_4:38124405-38124424 | None:intergenic | 35.0% | |
| ATACGAATAAGTGTAGACGT+CGG | + | chr1_4:38124406-38124425 | Msa0161970:intron | 35.0% | |
| TTGAAATTTGGACTACCGTA+AGG | - | chr1_4:38124574-38124593 | None:intergenic | 35.0% | |
| TATATTGAGGTGGTGTAAGT+TGG | - | chr1_4:38124703-38124722 | None:intergenic | 35.0% | |
| TGACACCCTTAATGAAATCA+TGG | + | chr1_4:38124841-38124860 | Msa0161970:intron | 35.0% | |
| GTGTCACCATGATTTCATTA+AGG | - | chr1_4:38124850-38124869 | None:intergenic | 35.0% | |
| !! | AAATTTGTTGTTCCCTGTTC+AGG | + | chr1_4:38125298-38125317 | Msa0161970:intron | 35.0% |
| AAGGCTATGTTGAAAGAACA+AGG | + | chr1_4:38125332-38125351 | Msa0161970:CDS | 35.0% | |
| AAAGAACAAGGTAACTCTTG+TGG | + | chr1_4:38125344-38125363 | Msa0161970:CDS | 35.0% | |
| GTAGTTGTAGAGGAAGCTTA+AGG | - | chr1_4:38123354-38123373 | None:intergenic | 40.0% | |
| !! | AGCATTGGTTGTAGTTGTAG+AGG | - | chr1_4:38123364-38123383 | None:intergenic | 40.0% |
| ! | TACGTGTGTCGATATCATGT+TGG | - | chr1_4:38123636-38123655 | None:intergenic | 40.0% |
| !! | ACTGGAGAGTAGTTTTCAAG+AGG | + | chr1_4:38123871-38123890 | Msa0161970:CDS | 40.0% |
| AGATCAAACTAGACCCTCAA+AGG | + | chr1_4:38123894-38123913 | Msa0161970:CDS | 40.0% | |
| GAAAGCTTCATCTTCCTTTG+AGG | - | chr1_4:38123911-38123930 | None:intergenic | 40.0% | |
| AAGGAAGATGAAGCTTTCCA+AGG | + | chr1_4:38123913-38123932 | Msa0161970:CDS | 40.0% | |
| ATGAAGCTTTCCAAGGAGTT+AGG | + | chr1_4:38123920-38123939 | Msa0161970:CDS | 40.0% | |
| TGAAGCTTTCCAAGGAGTTA+GGG | + | chr1_4:38123921-38123940 | Msa0161970:CDS | 40.0% | |
| ! | AGCCTCGTCAAATTGCTATT+TGG | + | chr1_4:38123948-38123967 | Msa0161970:CDS | 40.0% |
| TAACACAGCCGTAACCATTT+AGG | - | chr1_4:38124187-38124206 | None:intergenic | 40.0% | |
| !! | ACGGCTGTGTTATTTAGATG+AGG | + | chr1_4:38124195-38124214 | Msa0161970:intron | 40.0% |
| !! | CGGCTGTGTTATTTAGATGA+GGG | + | chr1_4:38124196-38124215 | Msa0161970:intron | 40.0% |
| ! | GTAAGTTGGGGCATTCTATT+TGG | + | chr1_4:38124804-38124823 | Msa0161970:intron | 40.0% |
| CGAACGCGTAACTAAAATCA+TGG | + | chr1_4:38124888-38124907 | Msa0161970:intron | 40.0% | |
| ! | CCATGTCTCTTTTGTAGACA+CGG | + | chr1_4:38125040-38125059 | Msa0161970:intron | 40.0% |
| GAAACAAAGTTGCAGTGCTA+TGG | - | chr1_4:38125106-38125125 | None:intergenic | 40.0% | |
| TCAACTTCACAACCTGAACA+GGG | - | chr1_4:38125313-38125332 | None:intergenic | 40.0% | |
| TTCAACTTCACAACCTGAAC+AGG | - | chr1_4:38125314-38125333 | None:intergenic | 40.0% | |
| !! | TGTTCAGGTTGTGAAGTTGA+AGG | + | chr1_4:38125313-38125332 | Msa0161970:intron | 40.0% |
| AACTCTTGTGGTAGAATGCA+AGG | + | chr1_4:38125356-38125375 | Msa0161970:CDS | 40.0% | |
| GTAGTTGTAGAGGAAGCTTA+AGG | - | chr1_4:38123354-38123373 | None:intergenic | 40.0% | |
| !! | AGCATTGGTTGTAGTTGTAG+AGG | - | chr1_4:38123364-38123383 | None:intergenic | 40.0% |
| ! | TACGTGTGTCGATATCATGT+TGG | - | chr1_4:38123636-38123655 | None:intergenic | 40.0% |
| !! | ACTGGAGAGTAGTTTTCAAG+AGG | + | chr1_4:38123871-38123890 | Msa0161970:CDS | 40.0% |
| AGATCAAACTAGACCCTCAA+AGG | + | chr1_4:38123894-38123913 | Msa0161970:CDS | 40.0% | |
| GAAAGCTTCATCTTCCTTTG+AGG | - | chr1_4:38123911-38123930 | None:intergenic | 40.0% | |
| AAGGAAGATGAAGCTTTCCA+AGG | + | chr1_4:38123913-38123932 | Msa0161970:CDS | 40.0% | |
| ATGAAGCTTTCCAAGGAGTT+AGG | + | chr1_4:38123920-38123939 | Msa0161970:CDS | 40.0% | |
| TGAAGCTTTCCAAGGAGTTA+GGG | + | chr1_4:38123921-38123940 | Msa0161970:CDS | 40.0% | |
| ! | AGCCTCGTCAAATTGCTATT+TGG | + | chr1_4:38123948-38123967 | Msa0161970:CDS | 40.0% |
| TAACACAGCCGTAACCATTT+AGG | - | chr1_4:38124187-38124206 | None:intergenic | 40.0% | |
| !! | ACGGCTGTGTTATTTAGATG+AGG | + | chr1_4:38124195-38124214 | Msa0161970:intron | 40.0% |
| !! | CGGCTGTGTTATTTAGATGA+GGG | + | chr1_4:38124196-38124215 | Msa0161970:intron | 40.0% |
| ! | GTAAGTTGGGGCATTCTATT+TGG | + | chr1_4:38124804-38124823 | Msa0161970:intron | 40.0% |
| CGAACGCGTAACTAAAATCA+TGG | + | chr1_4:38124888-38124907 | Msa0161970:intron | 40.0% | |
| ! | CCATGTCTCTTTTGTAGACA+CGG | + | chr1_4:38125040-38125059 | Msa0161970:intron | 40.0% |
| GAAACAAAGTTGCAGTGCTA+TGG | - | chr1_4:38125106-38125125 | None:intergenic | 40.0% | |
| TCAACTTCACAACCTGAACA+GGG | - | chr1_4:38125313-38125332 | None:intergenic | 40.0% | |
| TTCAACTTCACAACCTGAAC+AGG | - | chr1_4:38125314-38125333 | None:intergenic | 40.0% | |
| !! | TGTTCAGGTTGTGAAGTTGA+AGG | + | chr1_4:38125313-38125332 | Msa0161970:intron | 40.0% |
| AACTCTTGTGGTAGAATGCA+AGG | + | chr1_4:38125356-38125375 | Msa0161970:CDS | 40.0% | |
| CTTAAGGAAGACTCTGGTTG+AGG | - | chr1_4:38123338-38123357 | None:intergenic | 45.0% | |
| AGGAAGCTTAAGGAAGACTC+TGG | - | chr1_4:38123344-38123363 | None:intergenic | 45.0% | |
| TGGAAGTGAAACAGCAAGAC+TGG | + | chr1_4:38123756-38123775 | Msa0161970:CDS | 45.0% | |
| GCGATTAACGAGTGAACAGA+TGG | + | chr1_4:38123844-38123863 | Msa0161970:CDS | 45.0% | |
| GAGTGAACAGATGGAATCAC+TGG | + | chr1_4:38123853-38123872 | Msa0161970:CDS | 45.0% | |
| CCTTGGACACAACCTCAAAT+TGG | - | chr1_4:38124039-38124058 | None:intergenic | 45.0% | |
| ! | CCAATTTGAGGTTGTGTCCA+AGG | + | chr1_4:38124036-38124055 | Msa0161970:CDS | 45.0% |
| !!! | CTGAAGCTGCTGTTTTTCCT+TGG | - | chr1_4:38124056-38124075 | None:intergenic | 45.0% |
| CAAGGAAAAACAGCAGCTTC+AGG | + | chr1_4:38124054-38124073 | Msa0161970:CDS | 45.0% | |
| AAAACAGCAGCTTCAGGATG+AGG | + | chr1_4:38124060-38124079 | Msa0161970:CDS | 45.0% | |
| ! | AGTTGGGGCATTCTATTTGG+TGG | + | chr1_4:38124807-38124826 | Msa0161970:intron | 45.0% |
| CCGTGTCTACAAAAGAGACA+TGG | - | chr1_4:38125043-38125062 | None:intergenic | 45.0% | |
| CTTAAGGAAGACTCTGGTTG+AGG | - | chr1_4:38123338-38123357 | None:intergenic | 45.0% | |
| AGGAAGCTTAAGGAAGACTC+TGG | - | chr1_4:38123344-38123363 | None:intergenic | 45.0% | |
| TGGAAGTGAAACAGCAAGAC+TGG | + | chr1_4:38123756-38123775 | Msa0161970:CDS | 45.0% | |
| GCGATTAACGAGTGAACAGA+TGG | + | chr1_4:38123844-38123863 | Msa0161970:CDS | 45.0% | |
| GAGTGAACAGATGGAATCAC+TGG | + | chr1_4:38123853-38123872 | Msa0161970:CDS | 45.0% | |
| CCTTGGACACAACCTCAAAT+TGG | - | chr1_4:38124039-38124058 | None:intergenic | 45.0% | |
| ! | CCAATTTGAGGTTGTGTCCA+AGG | + | chr1_4:38124036-38124055 | Msa0161970:CDS | 45.0% |
| !!! | CTGAAGCTGCTGTTTTTCCT+TGG | - | chr1_4:38124056-38124075 | None:intergenic | 45.0% |
| CAAGGAAAAACAGCAGCTTC+AGG | + | chr1_4:38124054-38124073 | Msa0161970:CDS | 45.0% | |
| AAAACAGCAGCTTCAGGATG+AGG | + | chr1_4:38124060-38124079 | Msa0161970:CDS | 45.0% | |
| ! | AGTTGGGGCATTCTATTTGG+TGG | + | chr1_4:38124807-38124826 | Msa0161970:intron | 45.0% |
| CCGTGTCTACAAAAGAGACA+TGG | - | chr1_4:38125043-38125062 | None:intergenic | 45.0% | |
| !! | ATATTATAAATTTATTCTAA+CGG | + | chr1_4:38124733-38124752 | Msa0161970:intron | 5.0% |
| !! | ATATTATAAATTTATTCTAA+CGG | + | chr1_4:38124733-38124752 | Msa0161970:intron | 5.0% |
| GGACACCGATATGTAGACAC+CGG | - | chr1_4:38123695-38123714 | None:intergenic | 50.0% | |
| GGTTCCAAAATAGGCGTGCT+AGG | + | chr1_4:38123969-38123988 | Msa0161970:CDS | 50.0% | |
| TCCAAAATAGGCGTGCTAGG+TGG | + | chr1_4:38123972-38123991 | Msa0161970:CDS | 50.0% | |
| ! | TCCACCTAGCACGCCTATTT+TGG | - | chr1_4:38123976-38123995 | None:intergenic | 50.0% |
| TCTACGTTGCTCCAACAGAG+AGG | + | chr1_4:38125438-38125457 | Msa0161970:CDS | 50.0% | |
| GGACACCGATATGTAGACAC+CGG | - | chr1_4:38123695-38123714 | None:intergenic | 50.0% | |
| GGTTCCAAAATAGGCGTGCT+AGG | + | chr1_4:38123969-38123988 | Msa0161970:CDS | 50.0% | |
| TCCAAAATAGGCGTGCTAGG+TGG | + | chr1_4:38123972-38123991 | Msa0161970:CDS | 50.0% | |
| ! | TCCACCTAGCACGCCTATTT+TGG | - | chr1_4:38123976-38123995 | None:intergenic | 50.0% |
| TCTACGTTGCTCCAACAGAG+AGG | + | chr1_4:38125438-38125457 | Msa0161970:CDS | 50.0% | |
| AGGCTGTAGCCCTAACTCCT+TGG | - | chr1_4:38123933-38123952 | None:intergenic | 55.0% | |
| AGGCTGTAGCCCTAACTCCT+TGG | - | chr1_4:38123933-38123952 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 38123302 | 38125463 | 38123302 | ID=Msa0161970;Name=Msa0161970 |
| chr1_4 | mRNA | 38123302 | 38125463 | 38123302 | ID=Msa0161970-mRNA-1;Parent=Msa0161970;Name=Msa0161970-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|3|0|188 |
| chr1_4 | exon | 38123302 | 38123392 | 38123302 | ID=Msa0161970-mRNA-1:exon:11164;Parent=Msa0161970-mRNA-1 |
| chr1_4 | exon | 38123750 | 38124081 | 38123750 | ID=Msa0161970-mRNA-1:exon:11165;Parent=Msa0161970-mRNA-1 |
| chr1_4 | exon | 38125320 | 38125463 | 38125320 | ID=Msa0161970-mRNA-1:exon:11166;Parent=Msa0161970-mRNA-1 |
| chr1_4 | CDS | 38123302 | 38123392 | 38123302 | ID=Msa0161970-mRNA-1:cds;Parent=Msa0161970-mRNA-1 |
| chr1_4 | CDS | 38123750 | 38124081 | 38123750 | ID=Msa0161970-mRNA-1:cds;Parent=Msa0161970-mRNA-1 |
| chr1_4 | CDS | 38125320 | 38125463 | 38125320 | ID=Msa0161970-mRNA-1:cds;Parent=Msa0161970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
