Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431280 | XP_003590399.1 | 96.567 | 233 | 7 | 1 | 1 | 233 | 1 | 232 | 1.06e-165 | 466 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431280 | sp|Q9LZR0|ATB51_ARATH | 48.529 | 204 | 87 | 6 | 1 | 186 | 1 | 204 | 5.18e-47 | 158 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431280 | G7I9C4 | 96.567 | 233 | 7 | 1 | 1 | 233 | 1 | 232 | 5.07e-166 | 466 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1431280 | TF | HB-HD-ZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025030 | Msa1431280 | 0.954880 | 1.087310e-112 | -8.615850e-47 |
| Msa1431280 | Msa1431850 | 0.802214 | 6.238065e-49 | -8.615850e-47 |
| Msa0782230 | Msa1431280 | 0.810352 | 1.203156e-50 | -8.615850e-47 |
| Msa0124130 | Msa1431280 | 0.803464 | 3.443326e-49 | -8.615850e-47 |
| Msa0161970 | Msa1431280 | 0.971648 | 1.703904e-133 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431280 | MtrunA17_Chr7g0265521 | 56.327 | 245 | 82 | 11 | 1 | 233 | 1 | 232 | 1.78e-77 | 233 |
| Msa1431280 | MtrunA17_Chr1g0179581 | 97.297 | 111 | 2 | 1 | 32 | 142 | 1 | 110 | 7.94e-72 | 214 |
| Msa1431280 | MtrunA17_Chr1g0179591 | 90.625 | 96 | 9 | 0 | 138 | 233 | 34 | 129 | 8.92e-62 | 189 |
| Msa1431280 | MtrunA17_Chr6g0450991 | 55.882 | 102 | 38 | 1 | 59 | 153 | 66 | 167 | 1.89e-30 | 114 |
| Msa1431280 | MtrunA17_Chr6g0453021 | 55.670 | 97 | 43 | 0 | 54 | 150 | 90 | 186 | 1.09e-28 | 109 |
| Msa1431280 | MtrunA17_Chr4g0060031 | 49.580 | 119 | 53 | 1 | 49 | 160 | 84 | 202 | 1.26e-28 | 110 |
| Msa1431280 | MtrunA17_Chr8g0362151 | 55.670 | 97 | 36 | 1 | 57 | 146 | 74 | 170 | 3.52e-28 | 108 |
| Msa1431280 | MtrunA17_Chr3g0123691 | 38.764 | 178 | 87 | 5 | 55 | 221 | 55 | 221 | 4.54e-27 | 105 |
| Msa1431280 | MtrunA17_Chr5g0416391 | 56.180 | 89 | 39 | 0 | 59 | 147 | 76 | 164 | 1.18e-26 | 103 |
| Msa1431280 | MtrunA17_Chr3g0119291 | 42.953 | 149 | 80 | 3 | 59 | 207 | 58 | 201 | 3.61e-26 | 102 |
| Msa1431280 | MtrunA17_Chr8g0381741 | 39.355 | 155 | 81 | 4 | 48 | 189 | 39 | 193 | 5.24e-26 | 102 |
| Msa1431280 | MtrunA17_Chr5g0415941 | 58.427 | 89 | 37 | 0 | 58 | 146 | 85 | 173 | 1.09e-25 | 102 |
| Msa1431280 | MtrunA17_Chr8g0362751 | 53.608 | 97 | 38 | 1 | 60 | 149 | 89 | 185 | 3.80e-25 | 100 |
| Msa1431280 | MtrunA17_Chr3g0127511 | 49.038 | 104 | 45 | 2 | 62 | 158 | 40 | 142 | 8.70e-25 | 98.2 |
| Msa1431280 | MtrunA17_Chr7g0217111 | 54.639 | 97 | 37 | 1 | 58 | 147 | 78 | 174 | 1.14e-24 | 98.6 |
| Msa1431280 | MtrunA17_Chr8g0346251 | 41.538 | 130 | 57 | 3 | 64 | 183 | 45 | 165 | 5.95e-23 | 93.6 |
| Msa1431280 | MtrunA17_Chr5g0403701 | 43.396 | 106 | 60 | 0 | 55 | 160 | 48 | 153 | 9.80e-20 | 84.0 |
| Msa1431280 | MtrunA17_Chr4g0054421 | 48.315 | 89 | 46 | 0 | 60 | 148 | 127 | 215 | 7.01e-19 | 82.8 |
| Msa1431280 | MtrunA17_Chr7g0258831 | 45.161 | 93 | 51 | 0 | 60 | 152 | 160 | 252 | 1.54e-18 | 82.4 |
| Msa1431280 | MtrunA17_Chr4g0055851 | 46.067 | 89 | 48 | 0 | 60 | 148 | 120 | 208 | 1.57e-18 | 82.0 |
| Msa1431280 | MtrunA17_Chr1g0151971 | 43.119 | 109 | 55 | 2 | 47 | 148 | 110 | 218 | 4.60e-18 | 80.9 |
| Msa1431280 | MtrunA17_Chr1g0175651 | 44.944 | 89 | 49 | 0 | 60 | 148 | 154 | 242 | 1.36e-17 | 79.7 |
| Msa1431280 | MtrunA17_Chr5g0403691 | 41.593 | 113 | 59 | 1 | 55 | 160 | 48 | 160 | 2.22e-17 | 77.8 |
| Msa1431280 | MtrunA17_Chr5g0399491 | 47.191 | 89 | 47 | 0 | 60 | 148 | 136 | 224 | 2.68e-17 | 79.0 |
| Msa1431280 | MtrunA17_Chr8g0335131 | 46.067 | 89 | 48 | 0 | 60 | 148 | 146 | 234 | 6.57e-17 | 78.2 |
| Msa1431280 | MtrunA17_Chr4g0044091 | 38.931 | 131 | 69 | 2 | 55 | 184 | 60 | 180 | 8.63e-17 | 75.9 |
| Msa1431280 | MtrunA17_Chr2g0308611 | 43.820 | 89 | 50 | 0 | 60 | 148 | 200 | 288 | 9.72e-17 | 77.8 |
| Msa1431280 | MtrunA17_Chr4g0071411 | 45.349 | 86 | 47 | 0 | 63 | 148 | 91 | 176 | 3.25e-16 | 74.7 |
| Msa1431280 | MtrunA17_Chr5g0400781 | 43.820 | 89 | 50 | 0 | 60 | 148 | 123 | 211 | 8.67e-16 | 74.3 |
| Msa1431280 | MtrunA17_Chr3g0135331 | 43.820 | 89 | 50 | 0 | 60 | 148 | 145 | 233 | 2.55e-14 | 70.9 |
| Msa1431280 | MtrunA17_Chr2g0299031 | 42.697 | 89 | 51 | 0 | 60 | 148 | 82 | 170 | 2.87e-13 | 66.6 |
| Msa1431280 | MtrunA17_Chr2g0331581 | 39.024 | 82 | 50 | 0 | 63 | 144 | 145 | 226 | 3.41e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431280 | AT5G03790.1 | 48.529 | 204 | 87 | 6 | 1 | 186 | 1 | 204 | 5.26e-48 | 158 |
| Msa1431280 | AT5G03790.2 | 53.086 | 162 | 59 | 5 | 1 | 145 | 1 | 162 | 1.18e-41 | 140 |
| Msa1431280 | AT2G36610.1 | 48.603 | 179 | 66 | 7 | 7 | 162 | 5 | 180 | 1.67e-40 | 137 |
| Msa1431280 | AT4G40060.1 | 41.250 | 160 | 83 | 3 | 27 | 177 | 28 | 185 | 8.98e-31 | 115 |
| Msa1431280 | AT1G69780.1 | 44.755 | 143 | 66 | 1 | 57 | 199 | 82 | 211 | 5.25e-30 | 113 |
| Msa1431280 | AT5G15150.1 | 61.290 | 93 | 36 | 0 | 57 | 149 | 112 | 204 | 1.10e-28 | 110 |
| Msa1431280 | AT3G01470.1 | 37.059 | 170 | 97 | 2 | 57 | 219 | 65 | 231 | 1.93e-28 | 108 |
| Msa1431280 | AT5G65310.1 | 41.667 | 144 | 72 | 4 | 12 | 151 | 28 | 163 | 2.53e-28 | 109 |
| Msa1431280 | AT5G65310.2 | 41.667 | 144 | 72 | 4 | 12 | 151 | 10 | 145 | 2.62e-28 | 108 |
| Msa1431280 | AT2G22430.1 | 53.465 | 101 | 40 | 1 | 56 | 149 | 58 | 158 | 1.06e-27 | 107 |
| Msa1431280 | AT2G46680.1 | 49.541 | 109 | 48 | 1 | 45 | 146 | 17 | 125 | 2.09e-27 | 105 |
| Msa1431280 | AT2G46680.2 | 47.826 | 115 | 53 | 1 | 45 | 152 | 17 | 131 | 1.10e-26 | 103 |
| Msa1431280 | AT3G61890.1 | 39.264 | 163 | 70 | 3 | 63 | 214 | 33 | 177 | 1.41e-26 | 103 |
| Msa1431280 | AT3G01220.1 | 52.294 | 109 | 45 | 1 | 57 | 158 | 84 | 192 | 1.86e-26 | 103 |
| Msa1431280 | AT1G26960.1 | 42.958 | 142 | 60 | 3 | 57 | 193 | 68 | 193 | 2.90e-25 | 100 |
| Msa1431280 | AT2G18550.1 | 40.476 | 126 | 71 | 1 | 55 | 176 | 56 | 181 | 2.89e-24 | 96.7 |
| Msa1431280 | AT4G36740.2 | 50.526 | 95 | 47 | 0 | 55 | 149 | 51 | 145 | 7.20e-24 | 95.5 |
| Msa1431280 | AT4G36740.1 | 50.526 | 95 | 47 | 0 | 55 | 149 | 50 | 144 | 7.43e-24 | 95.5 |
| Msa1431280 | AT1G27045.1 | 48.039 | 102 | 46 | 1 | 60 | 154 | 68 | 169 | 2.11e-21 | 89.4 |
| Msa1431280 | AT1G27045.5 | 48.039 | 102 | 46 | 1 | 60 | 154 | 25 | 126 | 2.30e-21 | 88.2 |
| Msa1431280 | AT1G27045.3 | 48.039 | 102 | 46 | 1 | 60 | 154 | 25 | 126 | 2.30e-21 | 88.2 |
| Msa1431280 | AT5G66700.1 | 48.913 | 92 | 47 | 0 | 60 | 151 | 71 | 162 | 2.66e-21 | 89.0 |
| Msa1431280 | AT1G27045.2 | 48.039 | 102 | 46 | 1 | 60 | 154 | 17 | 118 | 2.73e-21 | 87.8 |
| Msa1431280 | AT1G27045.4 | 42.727 | 110 | 59 | 1 | 60 | 169 | 68 | 173 | 9.56e-20 | 85.5 |
| Msa1431280 | AT4G16780.1 | 43.617 | 94 | 53 | 0 | 55 | 148 | 124 | 217 | 1.38e-17 | 80.1 |
| Msa1431280 | AT5G53980.1 | 44.211 | 95 | 53 | 0 | 60 | 154 | 11 | 105 | 8.84e-17 | 75.1 |
| Msa1431280 | AT5G06710.1 | 44.944 | 89 | 49 | 0 | 60 | 148 | 190 | 278 | 1.00e-16 | 78.2 |
| Msa1431280 | AT2G01430.1 | 48.315 | 89 | 46 | 0 | 60 | 148 | 139 | 227 | 2.03e-16 | 76.6 |
| Msa1431280 | AT3G60390.1 | 46.067 | 89 | 48 | 0 | 60 | 148 | 162 | 250 | 2.17e-16 | 77.0 |
| Msa1431280 | AT4G17460.1 | 41.489 | 94 | 55 | 0 | 55 | 148 | 130 | 223 | 2.46e-16 | 76.6 |
| Msa1431280 | AT2G22800.1 | 42.553 | 94 | 54 | 0 | 55 | 148 | 108 | 201 | 3.08e-16 | 76.3 |
| Msa1431280 | AT4G37790.1 | 42.553 | 94 | 54 | 0 | 55 | 148 | 121 | 214 | 5.79e-16 | 75.5 |
| Msa1431280 | AT5G47370.1 | 31.973 | 147 | 91 | 2 | 11 | 148 | 72 | 218 | 8.60e-16 | 75.1 |
| Msa1431280 | AT2G44910.1 | 42.697 | 89 | 51 | 0 | 60 | 148 | 163 | 251 | 3.49e-15 | 73.6 |
| Msa1431280 | AT1G70920.2 | 41.489 | 94 | 55 | 0 | 55 | 148 | 34 | 127 | 1.59e-12 | 64.3 |
| Msa1431280 | AT1G70920.1 | 41.489 | 94 | 55 | 0 | 55 | 148 | 64 | 157 | 1.89e-12 | 64.7 |
| Msa1431280 | AT5G06710.4 | 53.846 | 52 | 24 | 0 | 60 | 111 | 190 | 241 | 1.23e-11 | 63.2 |
| Msa1431280 | AT2G01430.2 | 56.604 | 53 | 23 | 0 | 60 | 112 | 139 | 191 | 2.31e-11 | 61.6 |
Find 48 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACCTAGCACGCCTATTT+TGG | 0.156053 | tig0026815:-58647 | None:intergenic |
| TTGCTATTTGGTTCCAAAAT+AGG | 0.158232 | tig0026815:+58634 | Msa1431280:CDS |
| AGCCTCGTCAAATTGCTATT+TGG | 0.235729 | tig0026815:+58622 | Msa1431280:CDS |
| CCTTGGACACAACCTCAAAT+TGG | 0.274196 | tig0026815:-58710 | None:intergenic |
| AAACTGTTGTTTCAATTTAG+AGG | 0.288321 | tig0026815:+60177 | Msa1431280:CDS |
| ATGAAGCTTTCCAAGGAGTT+AGG | 0.302805 | tig0026815:+58594 | Msa1431280:CDS |
| CTTTCCCTTCACCTCTCTGT+TGG | 0.348637 | tig0026815:-60125 | None:intergenic |
| GAAAGCTTCATCTTCCTTTG+AGG | 0.362313 | tig0026815:-58582 | None:intergenic |
| AATTAAGGGTGATAGTTATA+AGG | 0.365223 | tig0026815:-60253 | None:intergenic |
| AGATACAATGTTCCCAGAAA+TGG | 0.367312 | tig0026815:+58455 | Msa1431280:CDS |
| AAAGCTTCATCTTCCTTTGA+GGG | 0.383872 | tig0026815:-58581 | None:intergenic |
| AACAGTAGAAAGCACATTAG+AGG | 0.384105 | tig0026815:+60087 | Msa1431280:CDS |
| GCAGGCCAGTAGGGCAATAG+TGG | 0.385106 | tig0026815:-60223 | None:intergenic |
| GTAGTTGTAGAGGAAGCTTA+AGG | 0.434188 | tig0026815:-58025 | None:intergenic |
| GTGTTCCACTATTGCCCTAC+TGG | 0.465761 | tig0026815:+60218 | Msa1431280:CDS |
| TGAAGCTTTCCAAGGAGTTA+GGG | 0.476348 | tig0026815:+58595 | Msa1431280:CDS |
| CCAATTTGAGGTTGTGTCCA+AGG | 0.478928 | tig0026815:+58710 | Msa1431280:CDS |
| TGGAAGTGAAACAGCAAGAC+TGG | 0.490760 | tig0026815:+58430 | Msa1431280:CDS |
| ATACAAGTGTTCAAGTTGCT+TGG | 0.493063 | tig0026815:-58673 | None:intergenic |
| GGTACAGAAGCAGGCCAGTA+GGG | 0.495028 | tig0026815:-60232 | None:intergenic |
| AGGCTGTAGCCCTAACTCCT+TGG | 0.496406 | tig0026815:-58604 | None:intergenic |
| TGTTCAGGTTGTGAAGTTGA+AGG | 0.499837 | tig0026815:+59988 | Msa1431280:intron |
| TTTACTTAGACACCAATTTG+AGG | 0.500502 | tig0026815:+58698 | Msa1431280:CDS |
| GTGTGTTTGTTAAGGAATGA+TGG | 0.508746 | tig0026815:+58410 | Msa1431280:intron |
| GGTTCCAAAATAGGCGTGCT+AGG | 0.516451 | tig0026815:+58643 | Msa1431280:CDS |
| TACAACCAATGCTCATATCA+AGG | 0.516637 | tig0026815:+58045 | Msa1431280:CDS |
| TAGTTATAAGGTACAGAAGC+AGG | 0.517499 | tig0026815:-60241 | None:intergenic |
| CAACAGTTGAACATTGATGA+AGG | 0.518077 | tig0026815:+60154 | Msa1431280:CDS |
| AAAACAGCAGCTTCAGGATG+AGG | 0.518698 | tig0026815:+58734 | Msa1431280:CDS |
| AGCATTGGTTGTAGTTGTAG+AGG | 0.525273 | tig0026815:-58035 | None:intergenic |
| TAGATAATTATGGAATGGAA+TGG | 0.526946 | tig0026815:+57967 | None:intergenic |
| AACTCTTGTGGTAGAATGCA+AGG | 0.527714 | tig0026815:+60031 | Msa1431280:CDS |
| GAGTGAACAGATGGAATCAC+TGG | 0.535577 | tig0026815:+58527 | Msa1431280:CDS |
| AGGTACAGAAGCAGGCCAGT+AGG | 0.540474 | tig0026815:-60233 | None:intergenic |
| GCGATTAACGAGTGAACAGA+TGG | 0.542500 | tig0026815:+58518 | Msa1431280:CDS |
| ACAGATAGATAATTATGGAA+TGG | 0.549629 | tig0026815:+57962 | None:intergenic |
| CTTAAGGAAGACTCTGGTTG+AGG | 0.556116 | tig0026815:-58009 | None:intergenic |
| TTGCTCCAACAGAGAGGTGA+AGG | 0.556685 | tig0026815:+60120 | Msa1431280:CDS |
| AGATCAAACTAGACCCTCAA+AGG | 0.558248 | tig0026815:+58568 | Msa1431280:CDS |
| AAAGAACAAGGTAACTCTTG+TGG | 0.599344 | tig0026815:+60019 | Msa1431280:CDS |
| AGGAAGCTTAAGGAAGACTC+TGG | 0.609695 | tig0026815:-58015 | None:intergenic |
| AAGGAAGATGAAGCTTTCCA+AGG | 0.615641 | tig0026815:+58587 | Msa1431280:CDS |
| AAGGCTATGTTGAAAGAACA+AGG | 0.632753 | tig0026815:+60007 | Msa1431280:CDS |
| TCCAAAATAGGCGTGCTAGG+TGG | 0.637372 | tig0026815:+58646 | Msa1431280:CDS |
| TTACTATACAGAAATGTCAG+TGG | 0.650416 | tig0026815:+60054 | Msa1431280:CDS |
| TGCTCCAACAGAGAGGTGAA+GGG | 0.655501 | tig0026815:+60121 | Msa1431280:CDS |
| AACCAAATAGCAATTTGACG+AGG | 0.698239 | tig0026815:-58624 | None:intergenic |
| TCTACGTTGCTCCAACAGAG+AGG | 0.709736 | tig0026815:+60114 | Msa1431280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCATAAGTTTAAATATA+GGG | - | tig0026815:58166-58185 | None:intergenic | 10.0% |
| !! | TTAATCATAAGTTTAAATAT+AGG | - | tig0026815:58167-58186 | None:intergenic | 10.0% |
| !!! | TGTTATTTTAAATAATCAAA+TGG | + | tig0026815:58970-58989 | Msa1431280:intron | 10.0% |
| !! | AGAGAAAAATAAATTATTTA+AGG | + | tig0026815:59113-59132 | Msa1431280:intron | 10.0% |
| !! | TAATCATAAGTTTAAATATA+GGG | - | tig0026815:58166-58185 | None:intergenic | 10.0% |
| !! | TTAATCATAAGTTTAAATAT+AGG | - | tig0026815:58167-58186 | None:intergenic | 10.0% |
| !!! | TGTTATTTTAAATAATCAAA+TGG | + | tig0026815:58970-58989 | Msa1431280:intron | 10.0% |
| !! | AGAGAAAAATAAATTATTTA+AGG | + | tig0026815:59113-59132 | Msa1431280:intron | 10.0% |
| !!! | TTTTTTTCTTCTTCTATATA+TGG | + | tig0026815:58223-58242 | Msa1431280:intron | 15.0% |
| !! | ACAATATTGTTTAAAAGTTT+AGG | - | tig0026815:58390-58409 | None:intergenic | 15.0% |
| !!! | ATAATTTATTTTTCTCTTCT+TGG | - | tig0026815:59110-59129 | None:intergenic | 15.0% |
| !! | TACGTAAAAAAAATCTAAAA+TGG | + | tig0026815:59198-59217 | Msa1431280:intron | 15.0% |
| !!! | GAAGTATATGTTTTTATTTT+CGG | + | tig0026815:59305-59324 | Msa1431280:intron | 15.0% |
| !!! | TTATTACAATGTGTTATTTT+AGG | + | tig0026815:59454-59473 | Msa1431280:intron | 15.0% |
| !!! | TATTACAATGTGTTATTTTA+GGG | + | tig0026815:59455-59474 | Msa1431280:intron | 15.0% |
| !!! | TCTTCTCTTATTTATATTAT+TGG | + | tig0026815:59654-59673 | Msa1431280:intron | 15.0% |
| !! | TATTAAATATTAAAGTAGCA+TGG | - | tig0026815:59855-59874 | None:intergenic | 15.0% |
| !! | AAAGTAAAATAGAGTTTAAT+TGG | + | tig0026815:59884-59903 | Msa1431280:intron | 15.0% |
| !!! | ATTTATATATGTAATTTGCA+TGG | - | tig0026815:59957-59976 | None:intergenic | 15.0% |
| !!! | TTTTTTTCTTCTTCTATATA+TGG | + | tig0026815:58223-58242 | Msa1431280:intron | 15.0% |
| !! | ACAATATTGTTTAAAAGTTT+AGG | - | tig0026815:58390-58409 | None:intergenic | 15.0% |
| !!! | ATAATTTATTTTTCTCTTCT+TGG | - | tig0026815:59110-59129 | None:intergenic | 15.0% |
| !! | TACGTAAAAAAAATCTAAAA+TGG | + | tig0026815:59198-59217 | Msa1431280:intron | 15.0% |
| !!! | GAAGTATATGTTTTTATTTT+CGG | + | tig0026815:59305-59324 | Msa1431280:intron | 15.0% |
| !!! | TTATTACAATGTGTTATTTT+AGG | + | tig0026815:59454-59473 | Msa1431280:intron | 15.0% |
| !!! | TATTACAATGTGTTATTTTA+GGG | + | tig0026815:59455-59474 | Msa1431280:intron | 15.0% |
| !!! | TCTTCTCTTATTTATATTAT+TGG | + | tig0026815:59654-59673 | Msa1431280:intron | 15.0% |
| !! | TATTAAATATTAAAGTAGCA+TGG | - | tig0026815:59855-59874 | None:intergenic | 15.0% |
| !! | AAAGTAAAATAGAGTTTAAT+TGG | + | tig0026815:59884-59903 | Msa1431280:intron | 15.0% |
| !!! | ATTTATATATGTAATTTGCA+TGG | - | tig0026815:59957-59976 | None:intergenic | 15.0% |
| !!! | ATTACATTCTAGAAGTTATT+AGG | - | tig0026815:58136-58155 | None:intergenic | 20.0% |
| !! | AGAAAAAAACTATATATGCA+TGG | - | tig0026815:58212-58231 | None:intergenic | 20.0% |
| !! | ATTCAAAATTTACGTATGTT+TGG | + | tig0026815:58271-58290 | Msa1431280:intron | 20.0% |
| !! | TCATTCTCATATATTATTAC+CGG | + | tig0026815:58347-58366 | Msa1431280:intron | 20.0% |
| !! | TAAATAGAGAAATACTTACA+TGG | - | tig0026815:59040-59059 | None:intergenic | 20.0% |
| !! | ATCGAAAACGTATAAATATA+TGG | + | tig0026815:59158-59177 | Msa1431280:intron | 20.0% |
| !!! | TAAATATATGGTGTTGATAT+TGG | + | tig0026815:59170-59189 | Msa1431280:intron | 20.0% |
| !!! | AAATATATGGTGTTGATATT+GGG | + | tig0026815:59171-59190 | Msa1431280:intron | 20.0% |
| !!! | TTATTTTGTCATAATCCTTA+CGG | + | tig0026815:59232-59251 | Msa1431280:intron | 20.0% |
| !! | TATATCAATGACTTATATTG+AGG | - | tig0026815:59392-59411 | None:intergenic | 20.0% |
| !!! | ATTACATTCTAGAAGTTATT+AGG | - | tig0026815:58136-58155 | None:intergenic | 20.0% |
| !! | AGAAAAAAACTATATATGCA+TGG | - | tig0026815:58212-58231 | None:intergenic | 20.0% |
| !! | ATTCAAAATTTACGTATGTT+TGG | + | tig0026815:58271-58290 | Msa1431280:intron | 20.0% |
| !! | TCATTCTCATATATTATTAC+CGG | + | tig0026815:58347-58366 | Msa1431280:intron | 20.0% |
| !! | TAAATAGAGAAATACTTACA+TGG | - | tig0026815:59040-59059 | None:intergenic | 20.0% |
| !! | ATCGAAAACGTATAAATATA+TGG | + | tig0026815:59158-59177 | Msa1431280:intron | 20.0% |
| !!! | TAAATATATGGTGTTGATAT+TGG | + | tig0026815:59170-59189 | Msa1431280:intron | 20.0% |
| !!! | AAATATATGGTGTTGATATT+GGG | + | tig0026815:59171-59190 | Msa1431280:intron | 20.0% |
| !!! | TTATTTTGTCATAATCCTTA+CGG | + | tig0026815:59232-59251 | Msa1431280:intron | 20.0% |
| !! | TATATCAATGACTTATATTG+AGG | - | tig0026815:59392-59411 | None:intergenic | 20.0% |
| ! | AAAAACTATATATGCATGGT+TGG | - | tig0026815:58208-58227 | None:intergenic | 25.0% |
| ! | TATATGGCATATATATAGCT+TGG | + | tig0026815:58239-58258 | Msa1431280:intron | 25.0% |
| !! | AATATTGTGTGTGTTTGTTA+AGG | + | tig0026815:58402-58421 | Msa1431280:intron | 25.0% |
| !!! | TCATCATTTTTTCCATTTCT+GGG | - | tig0026815:58470-58489 | None:intergenic | 25.0% |
| !!! | TTCATCATTTTTTCCATTTC+TGG | - | tig0026815:58471-58490 | None:intergenic | 25.0% |
| ! | ATGGAAAAAATGATGAAGTA+TGG | + | tig0026815:58474-58493 | Msa1431280:CDS | 25.0% |
| ! | TGGAAAAAATGATGAAGTAT+GGG | + | tig0026815:58475-58494 | Msa1431280:CDS | 25.0% |
| !!! | AAGCGCAAATAACTTTATTT+TGG | + | tig0026815:58897-58916 | Msa1431280:intron | 25.0% |
| ! | TTTACCTTCTCATTGAAATT+TGG | - | tig0026815:59262-59281 | None:intergenic | 25.0% |
| ! | AATGAAGGCAAAATATAGTT+TGG | + | tig0026815:59335-59354 | Msa1431280:intron | 25.0% |
| !! | GTAAGTTGGAGTAATATATT+TGG | - | tig0026815:59365-59384 | None:intergenic | 25.0% |
| ! | ATAAATTTATTCTAACGGTC+TGG | + | tig0026815:59414-59433 | Msa1431280:intron | 25.0% |
| ! | TTTATGAGTTTATGGATTCA+CGG | - | tig0026815:59622-59641 | None:intergenic | 25.0% |
| ! | TGATCAACTTTATGAGTTTA+TGG | - | tig0026815:59630-59649 | None:intergenic | 25.0% |
| ! | ACACATACATACATACATAT+TGG | - | tig0026815:59745-59764 | None:intergenic | 25.0% |
| !!! | AAACTGTTGTTTCAATTTAG+AGG | + | tig0026815:60177-60196 | Msa1431280:CDS | 25.0% |
| ! | AAAAACTATATATGCATGGT+TGG | - | tig0026815:58208-58227 | None:intergenic | 25.0% |
| ! | TATATGGCATATATATAGCT+TGG | + | tig0026815:58239-58258 | Msa1431280:intron | 25.0% |
| !! | AATATTGTGTGTGTTTGTTA+AGG | + | tig0026815:58402-58421 | Msa1431280:intron | 25.0% |
| !!! | TCATCATTTTTTCCATTTCT+GGG | - | tig0026815:58470-58489 | None:intergenic | 25.0% |
| !!! | TTCATCATTTTTTCCATTTC+TGG | - | tig0026815:58471-58490 | None:intergenic | 25.0% |
| ! | ATGGAAAAAATGATGAAGTA+TGG | + | tig0026815:58474-58493 | Msa1431280:CDS | 25.0% |
| ! | TGGAAAAAATGATGAAGTAT+GGG | + | tig0026815:58475-58494 | Msa1431280:CDS | 25.0% |
| !!! | AAGCGCAAATAACTTTATTT+TGG | + | tig0026815:58897-58916 | Msa1431280:intron | 25.0% |
| ! | TTTACCTTCTCATTGAAATT+TGG | - | tig0026815:59262-59281 | None:intergenic | 25.0% |
| ! | AATGAAGGCAAAATATAGTT+TGG | + | tig0026815:59335-59354 | Msa1431280:intron | 25.0% |
| !! | GTAAGTTGGAGTAATATATT+TGG | - | tig0026815:59365-59384 | None:intergenic | 25.0% |
| ! | ATAAATTTATTCTAACGGTC+TGG | + | tig0026815:59414-59433 | Msa1431280:intron | 25.0% |
| ! | TTTATGAGTTTATGGATTCA+CGG | - | tig0026815:59622-59641 | None:intergenic | 25.0% |
| ! | TGATCAACTTTATGAGTTTA+TGG | - | tig0026815:59630-59649 | None:intergenic | 25.0% |
| ! | ACACATACATACATACATAT+TGG | - | tig0026815:59745-59764 | None:intergenic | 25.0% |
| !!! | AAACTGTTGTTTCAATTTAG+AGG | + | tig0026815:60177-60196 | Msa1431280:CDS | 25.0% |
| ! | TTTTACCTTGATATGAGCAT+TGG | - | tig0026815:58053-58072 | None:intergenic | 30.0% |
| !! | TTGCTATTTGGTTCCAAAAT+AGG | + | tig0026815:58634-58653 | Msa1431280:CDS | 30.0% |
| TTTACTTAGACACCAATTTG+AGG | + | tig0026815:58698-58717 | Msa1431280:CDS | 30.0% | |
| GTCAATGAACAATACCTAAA+TGG | + | tig0026815:58844-58863 | Msa1431280:intron | 30.0% | |
| GAACAATACCTAAATGGTTA+CGG | + | tig0026815:58850-58869 | Msa1431280:intron | 30.0% | |
| AGTATTTGTGTGTGTCTAAA+TGG | + | tig0026815:58995-59014 | Msa1431280:intron | 30.0% | |
| ! | GTCTAAATGGATTTCATTTG+TGG | + | tig0026815:59008-59027 | Msa1431280:intron | 30.0% |
| TAGTCCAAATTTCAATGAGA+AGG | + | tig0026815:59255-59274 | Msa1431280:intron | 30.0% | |
| ! | ATTTTCGGTGAACTTAATGA+AGG | + | tig0026815:59320-59339 | Msa1431280:intron | 30.0% |
| AGTTGGAGTAATATATTTGG+TGG | - | tig0026815:59362-59381 | None:intergenic | 30.0% | |
| ATCAATGACTTATATTGAGG+TGG | - | tig0026815:59389-59408 | None:intergenic | 30.0% | |
| !!! | TGTTATTTTAGGGTGTAAGT+TGG | + | tig0026815:59465-59484 | Msa1431280:intron | 30.0% |
| !!! | GTTATTTTAGGGTGTAAGTT+GGG | + | tig0026815:59466-59485 | Msa1431280:intron | 30.0% |
| !!! | TTATTTTAGGGTGTAAGTTG+GGG | + | tig0026815:59467-59486 | Msa1431280:intron | 30.0% |
| TGTCACCATGATTTCATTAA+GGG | - | tig0026815:59524-59543 | None:intergenic | 30.0% | |
| TTACTATACAGAAATGTCAG+TGG | + | tig0026815:60054-60073 | Msa1431280:CDS | 30.0% | |
| ! | TTTTACCTTGATATGAGCAT+TGG | - | tig0026815:58053-58072 | None:intergenic | 30.0% |
| !! | TTGCTATTTGGTTCCAAAAT+AGG | + | tig0026815:58634-58653 | Msa1431280:CDS | 30.0% |
| TTTACTTAGACACCAATTTG+AGG | + | tig0026815:58698-58717 | Msa1431280:CDS | 30.0% | |
| GTCAATGAACAATACCTAAA+TGG | + | tig0026815:58844-58863 | Msa1431280:intron | 30.0% | |
| GAACAATACCTAAATGGTTA+CGG | + | tig0026815:58850-58869 | Msa1431280:intron | 30.0% | |
| AGTATTTGTGTGTGTCTAAA+TGG | + | tig0026815:58995-59014 | Msa1431280:intron | 30.0% | |
| ! | GTCTAAATGGATTTCATTTG+TGG | + | tig0026815:59008-59027 | Msa1431280:intron | 30.0% |
| TAGTCCAAATTTCAATGAGA+AGG | + | tig0026815:59255-59274 | Msa1431280:intron | 30.0% | |
| ! | ATTTTCGGTGAACTTAATGA+AGG | + | tig0026815:59320-59339 | Msa1431280:intron | 30.0% |
| AGTTGGAGTAATATATTTGG+TGG | - | tig0026815:59362-59381 | None:intergenic | 30.0% | |
| ATCAATGACTTATATTGAGG+TGG | - | tig0026815:59389-59408 | None:intergenic | 30.0% | |
| !!! | TGTTATTTTAGGGTGTAAGT+TGG | + | tig0026815:59465-59484 | Msa1431280:intron | 30.0% |
| !!! | GTTATTTTAGGGTGTAAGTT+GGG | + | tig0026815:59466-59485 | Msa1431280:intron | 30.0% |
| !!! | TTATTTTAGGGTGTAAGTTG+GGG | + | tig0026815:59467-59486 | Msa1431280:intron | 30.0% |
| TGTCACCATGATTTCATTAA+GGG | - | tig0026815:59524-59543 | None:intergenic | 30.0% | |
| TTACTATACAGAAATGTCAG+TGG | + | tig0026815:60054-60073 | Msa1431280:CDS | 30.0% | |
| TACAACCAATGCTCATATCA+AGG | + | tig0026815:58045-58064 | Msa1431280:CDS | 35.0% | |
| ACACACGTAACTACATACAA+TGG | + | tig0026815:58321-58340 | Msa1431280:intron | 35.0% | |
| TATTACCGGTGTCTACATAT+CGG | + | tig0026815:58361-58380 | Msa1431280:intron | 35.0% | |
| ! | GTGTGTTTGTTAAGGAATGA+TGG | + | tig0026815:58410-58429 | Msa1431280:intron | 35.0% |
| AGATACAATGTTCCCAGAAA+TGG | + | tig0026815:58455-58474 | Msa1431280:CDS | 35.0% | |
| AAAGCTTCATCTTCCTTTGA+GGG | - | tig0026815:58584-58603 | None:intergenic | 35.0% | |
| AACCAAATAGCAATTTGACG+AGG | - | tig0026815:58627-58646 | None:intergenic | 35.0% | |
| !! | ATACAAGTGTTCAAGTTGCT+TGG | - | tig0026815:58676-58695 | None:intergenic | 35.0% |
| !!! | TATTTTGGCGCATACACAAA+TGG | + | tig0026815:58912-58931 | Msa1431280:intron | 35.0% |
| CGTCTACACTTATTCGTATA+TGG | - | tig0026815:59081-59100 | None:intergenic | 35.0% | |
| ATACGAATAAGTGTAGACGT+CGG | + | tig0026815:59082-59101 | Msa1431280:intron | 35.0% | |
| TTGAAATTTGGACTACCGTA+AGG | - | tig0026815:59250-59269 | None:intergenic | 35.0% | |
| TATATTGAGGTGGTGTAAGT+TGG | - | tig0026815:59379-59398 | None:intergenic | 35.0% | |
| TGACACCCTTAATGAAATCA+TGG | + | tig0026815:59516-59535 | Msa1431280:intron | 35.0% | |
| GTGTCACCATGATTTCATTA+AGG | - | tig0026815:59525-59544 | None:intergenic | 35.0% | |
| !! | AAATTTGTTGTTCCCTGTTC+AGG | + | tig0026815:59973-59992 | Msa1431280:intron | 35.0% |
| AAGGCTATGTTGAAAGAACA+AGG | + | tig0026815:60007-60026 | Msa1431280:CDS | 35.0% | |
| AAAGAACAAGGTAACTCTTG+TGG | + | tig0026815:60019-60038 | Msa1431280:CDS | 35.0% | |
| ! | AACAGTAGAAAGCACATTAG+AGG | + | tig0026815:60087-60106 | Msa1431280:CDS | 35.0% |
| CAACAGTTGAACATTGATGA+AGG | + | tig0026815:60154-60173 | Msa1431280:CDS | 35.0% | |
| TAGTTATAAGGTACAGAAGC+AGG | - | tig0026815:60244-60263 | None:intergenic | 35.0% | |
| TACAACCAATGCTCATATCA+AGG | + | tig0026815:58045-58064 | Msa1431280:CDS | 35.0% | |
| ACACACGTAACTACATACAA+TGG | + | tig0026815:58321-58340 | Msa1431280:intron | 35.0% | |
| TATTACCGGTGTCTACATAT+CGG | + | tig0026815:58361-58380 | Msa1431280:intron | 35.0% | |
| ! | GTGTGTTTGTTAAGGAATGA+TGG | + | tig0026815:58410-58429 | Msa1431280:intron | 35.0% |
| AGATACAATGTTCCCAGAAA+TGG | + | tig0026815:58455-58474 | Msa1431280:CDS | 35.0% | |
| AAAGCTTCATCTTCCTTTGA+GGG | - | tig0026815:58584-58603 | None:intergenic | 35.0% | |
| AACCAAATAGCAATTTGACG+AGG | - | tig0026815:58627-58646 | None:intergenic | 35.0% | |
| !! | ATACAAGTGTTCAAGTTGCT+TGG | - | tig0026815:58676-58695 | None:intergenic | 35.0% |
| !!! | TATTTTGGCGCATACACAAA+TGG | + | tig0026815:58912-58931 | Msa1431280:intron | 35.0% |
| CGTCTACACTTATTCGTATA+TGG | - | tig0026815:59081-59100 | None:intergenic | 35.0% | |
| ATACGAATAAGTGTAGACGT+CGG | + | tig0026815:59082-59101 | Msa1431280:intron | 35.0% | |
| TTGAAATTTGGACTACCGTA+AGG | - | tig0026815:59250-59269 | None:intergenic | 35.0% | |
| TATATTGAGGTGGTGTAAGT+TGG | - | tig0026815:59379-59398 | None:intergenic | 35.0% | |
| TGACACCCTTAATGAAATCA+TGG | + | tig0026815:59516-59535 | Msa1431280:intron | 35.0% | |
| GTGTCACCATGATTTCATTA+AGG | - | tig0026815:59525-59544 | None:intergenic | 35.0% | |
| !! | AAATTTGTTGTTCCCTGTTC+AGG | + | tig0026815:59973-59992 | Msa1431280:intron | 35.0% |
| AAGGCTATGTTGAAAGAACA+AGG | + | tig0026815:60007-60026 | Msa1431280:CDS | 35.0% | |
| AAAGAACAAGGTAACTCTTG+TGG | + | tig0026815:60019-60038 | Msa1431280:CDS | 35.0% | |
| ! | AACAGTAGAAAGCACATTAG+AGG | + | tig0026815:60087-60106 | Msa1431280:CDS | 35.0% |
| CAACAGTTGAACATTGATGA+AGG | + | tig0026815:60154-60173 | Msa1431280:CDS | 35.0% | |
| TAGTTATAAGGTACAGAAGC+AGG | - | tig0026815:60244-60263 | None:intergenic | 35.0% | |
| GTAGTTGTAGAGGAAGCTTA+AGG | - | tig0026815:58028-58047 | None:intergenic | 40.0% | |
| !! | AGCATTGGTTGTAGTTGTAG+AGG | - | tig0026815:58038-58057 | None:intergenic | 40.0% |
| ! | TACGTGTGTCGATATCATGT+TGG | - | tig0026815:58310-58329 | None:intergenic | 40.0% |
| !! | ACTGGAGAGTAGTTTTCAAG+AGG | + | tig0026815:58545-58564 | Msa1431280:CDS | 40.0% |
| AGATCAAACTAGACCCTCAA+AGG | + | tig0026815:58568-58587 | Msa1431280:CDS | 40.0% | |
| GAAAGCTTCATCTTCCTTTG+AGG | - | tig0026815:58585-58604 | None:intergenic | 40.0% | |
| AAGGAAGATGAAGCTTTCCA+AGG | + | tig0026815:58587-58606 | Msa1431280:CDS | 40.0% | |
| ATGAAGCTTTCCAAGGAGTT+AGG | + | tig0026815:58594-58613 | Msa1431280:CDS | 40.0% | |
| TGAAGCTTTCCAAGGAGTTA+GGG | + | tig0026815:58595-58614 | Msa1431280:CDS | 40.0% | |
| ! | AGCCTCGTCAAATTGCTATT+TGG | + | tig0026815:58622-58641 | Msa1431280:CDS | 40.0% |
| TAACACAGCCGTAACCATTT+AGG | - | tig0026815:58861-58880 | None:intergenic | 40.0% | |
| !! | ACGGCTGTGTTATTTAGATG+AGG | + | tig0026815:58869-58888 | Msa1431280:intron | 40.0% |
| !! | CGGCTGTGTTATTTAGATGA+GGG | + | tig0026815:58870-58889 | Msa1431280:intron | 40.0% |
| ! | GTAAGTTGGGGCATTCTATT+TGG | + | tig0026815:59479-59498 | Msa1431280:intron | 40.0% |
| CGAACGCGTAACTAAAATCA+TGG | + | tig0026815:59563-59582 | Msa1431280:intron | 40.0% | |
| ! | CCATGTCTCTTTTGTAGACA+CGG | + | tig0026815:59715-59734 | Msa1431280:intron | 40.0% |
| GAAACAAAGTTGCAGTGCTA+TGG | - | tig0026815:59781-59800 | None:intergenic | 40.0% | |
| TCAACTTCACAACCTGAACA+GGG | - | tig0026815:59988-60007 | None:intergenic | 40.0% | |
| TTCAACTTCACAACCTGAAC+AGG | - | tig0026815:59989-60008 | None:intergenic | 40.0% | |
| !! | TGTTCAGGTTGTGAAGTTGA+AGG | + | tig0026815:59988-60007 | Msa1431280:intron | 40.0% |
| AACTCTTGTGGTAGAATGCA+AGG | + | tig0026815:60031-60050 | Msa1431280:CDS | 40.0% | |
| GTAGTTGTAGAGGAAGCTTA+AGG | - | tig0026815:58028-58047 | None:intergenic | 40.0% | |
| !! | AGCATTGGTTGTAGTTGTAG+AGG | - | tig0026815:58038-58057 | None:intergenic | 40.0% |
| ! | TACGTGTGTCGATATCATGT+TGG | - | tig0026815:58310-58329 | None:intergenic | 40.0% |
| !! | ACTGGAGAGTAGTTTTCAAG+AGG | + | tig0026815:58545-58564 | Msa1431280:CDS | 40.0% |
| AGATCAAACTAGACCCTCAA+AGG | + | tig0026815:58568-58587 | Msa1431280:CDS | 40.0% | |
| GAAAGCTTCATCTTCCTTTG+AGG | - | tig0026815:58585-58604 | None:intergenic | 40.0% | |
| AAGGAAGATGAAGCTTTCCA+AGG | + | tig0026815:58587-58606 | Msa1431280:CDS | 40.0% | |
| ATGAAGCTTTCCAAGGAGTT+AGG | + | tig0026815:58594-58613 | Msa1431280:CDS | 40.0% | |
| TGAAGCTTTCCAAGGAGTTA+GGG | + | tig0026815:58595-58614 | Msa1431280:CDS | 40.0% | |
| ! | AGCCTCGTCAAATTGCTATT+TGG | + | tig0026815:58622-58641 | Msa1431280:CDS | 40.0% |
| TAACACAGCCGTAACCATTT+AGG | - | tig0026815:58861-58880 | None:intergenic | 40.0% | |
| !! | ACGGCTGTGTTATTTAGATG+AGG | + | tig0026815:58869-58888 | Msa1431280:intron | 40.0% |
| !! | CGGCTGTGTTATTTAGATGA+GGG | + | tig0026815:58870-58889 | Msa1431280:intron | 40.0% |
| ! | GTAAGTTGGGGCATTCTATT+TGG | + | tig0026815:59479-59498 | Msa1431280:intron | 40.0% |
| CGAACGCGTAACTAAAATCA+TGG | + | tig0026815:59563-59582 | Msa1431280:intron | 40.0% | |
| ! | CCATGTCTCTTTTGTAGACA+CGG | + | tig0026815:59715-59734 | Msa1431280:intron | 40.0% |
| GAAACAAAGTTGCAGTGCTA+TGG | - | tig0026815:59781-59800 | None:intergenic | 40.0% | |
| TCAACTTCACAACCTGAACA+GGG | - | tig0026815:59988-60007 | None:intergenic | 40.0% | |
| TTCAACTTCACAACCTGAAC+AGG | - | tig0026815:59989-60008 | None:intergenic | 40.0% | |
| !! | TGTTCAGGTTGTGAAGTTGA+AGG | + | tig0026815:59988-60007 | Msa1431280:intron | 40.0% |
| AACTCTTGTGGTAGAATGCA+AGG | + | tig0026815:60031-60050 | Msa1431280:CDS | 40.0% | |
| CTTAAGGAAGACTCTGGTTG+AGG | - | tig0026815:58012-58031 | None:intergenic | 45.0% | |
| AGGAAGCTTAAGGAAGACTC+TGG | - | tig0026815:58018-58037 | None:intergenic | 45.0% | |
| TGGAAGTGAAACAGCAAGAC+TGG | + | tig0026815:58430-58449 | Msa1431280:CDS | 45.0% | |
| GCGATTAACGAGTGAACAGA+TGG | + | tig0026815:58518-58537 | Msa1431280:CDS | 45.0% | |
| GAGTGAACAGATGGAATCAC+TGG | + | tig0026815:58527-58546 | Msa1431280:CDS | 45.0% | |
| CCTTGGACACAACCTCAAAT+TGG | - | tig0026815:58713-58732 | None:intergenic | 45.0% | |
| ! | CCAATTTGAGGTTGTGTCCA+AGG | + | tig0026815:58710-58729 | Msa1431280:CDS | 45.0% |
| !!! | CTGAAGCTGCTGTTTTTCCT+TGG | - | tig0026815:58730-58749 | None:intergenic | 45.0% |
| CAAGGAAAAACAGCAGCTTC+AGG | + | tig0026815:58728-58747 | Msa1431280:CDS | 45.0% | |
| AAAACAGCAGCTTCAGGATG+AGG | + | tig0026815:58734-58753 | Msa1431280:CDS | 45.0% | |
| ! | AGTTGGGGCATTCTATTTGG+TGG | + | tig0026815:59482-59501 | Msa1431280:intron | 45.0% |
| CCGTGTCTACAAAAGAGACA+TGG | - | tig0026815:59718-59737 | None:intergenic | 45.0% | |
| CTTAAGGAAGACTCTGGTTG+AGG | - | tig0026815:58012-58031 | None:intergenic | 45.0% | |
| AGGAAGCTTAAGGAAGACTC+TGG | - | tig0026815:58018-58037 | None:intergenic | 45.0% | |
| TGGAAGTGAAACAGCAAGAC+TGG | + | tig0026815:58430-58449 | Msa1431280:CDS | 45.0% | |
| GCGATTAACGAGTGAACAGA+TGG | + | tig0026815:58518-58537 | Msa1431280:CDS | 45.0% | |
| GAGTGAACAGATGGAATCAC+TGG | + | tig0026815:58527-58546 | Msa1431280:CDS | 45.0% | |
| CCTTGGACACAACCTCAAAT+TGG | - | tig0026815:58713-58732 | None:intergenic | 45.0% | |
| ! | CCAATTTGAGGTTGTGTCCA+AGG | + | tig0026815:58710-58729 | Msa1431280:CDS | 45.0% |
| !!! | CTGAAGCTGCTGTTTTTCCT+TGG | - | tig0026815:58730-58749 | None:intergenic | 45.0% |
| CAAGGAAAAACAGCAGCTTC+AGG | + | tig0026815:58728-58747 | Msa1431280:CDS | 45.0% | |
| AAAACAGCAGCTTCAGGATG+AGG | + | tig0026815:58734-58753 | Msa1431280:CDS | 45.0% | |
| ! | AGTTGGGGCATTCTATTTGG+TGG | + | tig0026815:59482-59501 | Msa1431280:intron | 45.0% |
| CCGTGTCTACAAAAGAGACA+TGG | - | tig0026815:59718-59737 | None:intergenic | 45.0% | |
| !! | ATATTATAAATTTATTCTAA+CGG | + | tig0026815:59409-59428 | Msa1431280:intron | 5.0% |
| !! | ATATTATAAATTTATTCTAA+CGG | + | tig0026815:59409-59428 | Msa1431280:intron | 5.0% |
| GGACACCGATATGTAGACAC+CGG | - | tig0026815:58369-58388 | None:intergenic | 50.0% | |
| GGTTCCAAAATAGGCGTGCT+AGG | + | tig0026815:58643-58662 | Msa1431280:CDS | 50.0% | |
| TCCAAAATAGGCGTGCTAGG+TGG | + | tig0026815:58646-58665 | Msa1431280:CDS | 50.0% | |
| ! | TCCACCTAGCACGCCTATTT+TGG | - | tig0026815:58650-58669 | None:intergenic | 50.0% |
| TCTACGTTGCTCCAACAGAG+AGG | + | tig0026815:60114-60133 | Msa1431280:CDS | 50.0% | |
| TTGCTCCAACAGAGAGGTGA+AGG | + | tig0026815:60120-60139 | Msa1431280:CDS | 50.0% | |
| TGCTCCAACAGAGAGGTGAA+GGG | + | tig0026815:60121-60140 | Msa1431280:CDS | 50.0% | |
| CTTTCCCTTCACCTCTCTGT+TGG | - | tig0026815:60128-60147 | None:intergenic | 50.0% | |
| GTGTTCCACTATTGCCCTAC+TGG | + | tig0026815:60218-60237 | Msa1431280:CDS | 50.0% | |
| GGACACCGATATGTAGACAC+CGG | - | tig0026815:58369-58388 | None:intergenic | 50.0% | |
| GGTTCCAAAATAGGCGTGCT+AGG | + | tig0026815:58643-58662 | Msa1431280:CDS | 50.0% | |
| TCCAAAATAGGCGTGCTAGG+TGG | + | tig0026815:58646-58665 | Msa1431280:CDS | 50.0% | |
| ! | TCCACCTAGCACGCCTATTT+TGG | - | tig0026815:58650-58669 | None:intergenic | 50.0% |
| TCTACGTTGCTCCAACAGAG+AGG | + | tig0026815:60114-60133 | Msa1431280:CDS | 50.0% | |
| TTGCTCCAACAGAGAGGTGA+AGG | + | tig0026815:60120-60139 | Msa1431280:CDS | 50.0% | |
| TGCTCCAACAGAGAGGTGAA+GGG | + | tig0026815:60121-60140 | Msa1431280:CDS | 50.0% | |
| CTTTCCCTTCACCTCTCTGT+TGG | - | tig0026815:60128-60147 | None:intergenic | 50.0% | |
| GTGTTCCACTATTGCCCTAC+TGG | + | tig0026815:60218-60237 | Msa1431280:CDS | 50.0% | |
| AGGCTGTAGCCCTAACTCCT+TGG | - | tig0026815:58607-58626 | None:intergenic | 55.0% | |
| GGTACAGAAGCAGGCCAGTA+GGG | - | tig0026815:60235-60254 | None:intergenic | 55.0% | |
| AGGTACAGAAGCAGGCCAGT+AGG | - | tig0026815:60236-60255 | None:intergenic | 55.0% | |
| AGGCTGTAGCCCTAACTCCT+TGG | - | tig0026815:58607-58626 | None:intergenic | 55.0% | |
| GGTACAGAAGCAGGCCAGTA+GGG | - | tig0026815:60235-60254 | None:intergenic | 55.0% | |
| AGGTACAGAAGCAGGCCAGT+AGG | - | tig0026815:60236-60255 | None:intergenic | 55.0% | |
| GCAGGCCAGTAGGGCAATAG+TGG | - | tig0026815:60226-60245 | None:intergenic | 60.0% | |
| GCAGGCCAGTAGGGCAATAG+TGG | - | tig0026815:60226-60245 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026815 | gene | 57976 | 60273 | 57976 | ID=Msa1431280;Name=Msa1431280 |
| tig0026815 | mRNA | 57976 | 60273 | 57976 | ID=Msa1431280-mRNA-1;Parent=Msa1431280;Name=Msa1431280-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|233 |
| tig0026815 | exon | 57976 | 58066 | 57976 | ID=Msa1431280-mRNA-1:exon:7470;Parent=Msa1431280-mRNA-1 |
| tig0026815 | exon | 58424 | 58755 | 58424 | ID=Msa1431280-mRNA-1:exon:7471;Parent=Msa1431280-mRNA-1 |
| tig0026815 | exon | 59995 | 60273 | 59995 | ID=Msa1431280-mRNA-1:exon:7472;Parent=Msa1431280-mRNA-1 |
| tig0026815 | CDS | 57976 | 58066 | 57976 | ID=Msa1431280-mRNA-1:cds;Parent=Msa1431280-mRNA-1 |
| tig0026815 | CDS | 58424 | 58755 | 58424 | ID=Msa1431280-mRNA-1:cds;Parent=Msa1431280-mRNA-1 |
| tig0026815 | CDS | 59995 | 60273 | 59995 | ID=Msa1431280-mRNA-1:cds;Parent=Msa1431280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
