Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162060 | XP_003590783.1 | 95.769 | 520 | 22 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1028 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162060 | sp|Q0WUY1|NADKC_ARATH | 65.272 | 478 | 157 | 3 | 42 | 516 | 59 | 530 | 0.0 | 604 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162060 | G7I3Y0 | 95.769 | 520 | 22 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1028 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0161990 | Msa0162060 | 0.810509 | 1.112832e-50 | -8.615850e-47 |
| Msa0162020 | Msa0162060 | 0.972426 | 9.556280e-135 | -8.615850e-47 |
| Msa0162060 | Msa0162090 | 0.960933 | 4.042472e-119 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162060 | MtrunA17_Chr1g0187021 | 95.769 | 520 | 22 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1028 |
| Msa0162060 | MtrunA17_Chr1g0187051 | 80.000 | 520 | 87 | 4 | 1 | 519 | 1 | 504 | 0.0 | 845 |
| Msa0162060 | MtrunA17_Chr1g0187071 | 70.079 | 508 | 135 | 3 | 12 | 519 | 28 | 518 | 0.0 | 689 |
| Msa0162060 | MtrunA17_Chr1g0184551 | 62.333 | 523 | 177 | 8 | 1 | 515 | 1 | 511 | 0.0 | 647 |
| Msa0162060 | MtrunA17_Chr7g0260781 | 68.975 | 361 | 102 | 4 | 158 | 515 | 17 | 370 | 8.80e-166 | 474 |
| Msa0162060 | MtrunA17_Chr7g0260791 | 48.667 | 150 | 72 | 2 | 15 | 163 | 28 | 173 | 7.69e-41 | 145 |
| Msa0162060 | MtrunA17_Chr1g0187031 | 90.385 | 52 | 5 | 0 | 17 | 68 | 4 | 55 | 6.59e-24 | 95.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162060 | AT1G06750.3 | 62.795 | 508 | 170 | 7 | 13 | 515 | 14 | 507 | 0.0 | 615 |
| Msa0162060 | AT1G06750.1 | 62.795 | 508 | 170 | 7 | 13 | 515 | 14 | 507 | 0.0 | 615 |
| Msa0162060 | AT1G06750.2 | 62.795 | 508 | 170 | 7 | 13 | 515 | 21 | 514 | 0.0 | 615 |
| Msa0162060 | AT1G04280.2 | 65.272 | 478 | 157 | 3 | 42 | 516 | 5 | 476 | 0.0 | 605 |
| Msa0162060 | AT1G04280.1 | 65.272 | 478 | 157 | 3 | 42 | 516 | 59 | 530 | 0.0 | 604 |
| Msa0162060 | AT2G30630.1 | 61.493 | 509 | 177 | 8 | 12 | 515 | 27 | 521 | 0.0 | 601 |
| Msa0162060 | AT2G30630.2 | 59.245 | 530 | 176 | 9 | 12 | 515 | 27 | 542 | 0.0 | 589 |
| Msa0162060 | AT2G30630.3 | 60.105 | 381 | 134 | 7 | 15 | 391 | 31 | 397 | 9.08e-148 | 429 |
Find 142 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAAGTTTGCAATATTT+TGG | 0.119289 | 1_4:+38224379 | None:intergenic |
| TTTCACACAAAACAGCTTAT+TGG | 0.163896 | 1_4:-38224213 | Msa0162060:intron |
| CGGCTGCTGCCTCGCGTTAC+CGG | 0.199019 | 1_4:-38229022 | Msa0162060:CDS |
| ATGGCTTTGGCAGATCATTT+TGG | 0.259344 | 1_4:-38225124 | Msa0162060:intron |
| TCTTGTCACCTTCAGATTCT+TGG | 0.267503 | 1_4:+38225691 | None:intergenic |
| GTCAGCTACAGCTTCTTCTT+TGG | 0.273218 | 1_4:-38229260 | Msa0162060:five_prime_UTR |
| GTTCTGGCTGCCTCCTTTGC+CGG | 0.296647 | 1_4:-38229056 | Msa0162060:CDS |
| TGAATCTCTCTATGTCAAAT+TGG | 0.306179 | 1_4:-38226186 | Msa0162060:CDS |
| CAAAGCATCTTTGAATATCT+TGG | 0.313200 | 1_4:-38226224 | Msa0162060:CDS |
| AGCAGCCGCGGCAATCAAAC+CGG | 0.340708 | 1_4:+38229037 | None:intergenic |
| TGTTCTTCTGCTTCATTCAC+TGG | 0.342257 | 1_4:+38224688 | None:intergenic |
| CGTCCGCCTCACACATGTTC+TGG | 0.358002 | 1_4:-38229072 | Msa0162060:CDS |
| TATGTAAAGTAGATGAAATA+TGG | 0.360129 | 1_4:-38229365 | Msa0162060:five_prime_UTR |
| GATGCTTTGATCACATCCTT+TGG | 0.362853 | 1_4:+38226238 | None:intergenic |
| CATGCTTCAAACTGCTGAAT+TGG | 0.363240 | 1_4:-38225003 | Msa0162060:intron |
| CAATGGAACCTGGTTCTGTT+TGG | 0.366252 | 1_4:-38224068 | Msa0162060:CDS |
| GTACAATTAATGAAAATTAC+TGG | 0.366745 | 1_4:-38224714 | Msa0162060:CDS |
| CAAGTTGATAAAACAGAATC+TGG | 0.373214 | 1_4:-38228957 | Msa0162060:CDS |
| ACAGAACCAGGTTCCATTGC+TGG | 0.377964 | 1_4:+38224072 | None:intergenic |
| TTCTGAACACTTGACCTTGA+AGG | 0.379470 | 1_4:+38224027 | None:intergenic |
| CATGGTGACCCCTAGAGTTA+AGG | 0.381657 | 1_4:+38225030 | None:intergenic |
| AGCTCCATTTGTTATTAGTC+AGG | 0.384574 | 1_4:-38226111 | Msa0162060:intron |
| GTGTTGGCAGCTAGGCAAAT+AGG | 0.386266 | 1_4:-38226323 | Msa0162060:intron |
| TAAAACAGAATCTGGTCGTT+TGG | 0.388807 | 1_4:-38228949 | Msa0162060:CDS |
| CACAATTGCAATCTCACAAA+AGG | 0.389289 | 1_4:-38224417 | Msa0162060:CDS |
| CTCCTCTCACTGAGGGCCAT+GGG | 0.393070 | 1_4:+38225596 | None:intergenic |
| AATACCTTGCTCCATCTTGT+TGG | 0.394670 | 1_4:+38229194 | None:intergenic |
| GAAGAGATGAAAGTAATAAA+TGG | 0.394683 | 1_4:-38225650 | Msa0162060:CDS |
| CACAAACATAAGTACAGAAT+GGG | 0.394745 | 1_4:-38224763 | Msa0162060:CDS |
| CTTTGGCTCTAGTCTATTTG+TGG | 0.405028 | 1_4:-38229243 | Msa0162060:five_prime_UTR |
| ACTCCTCTCACTGAGGGCCA+TGG | 0.405385 | 1_4:+38225595 | None:intergenic |
| GGATATCTTGCAGTTATTAG+AGG | 0.406489 | 1_4:-38224586 | Msa0162060:CDS |
| TTGCAGTTATTAGAGGCATT+AGG | 0.422529 | 1_4:-38224579 | Msa0162060:intron |
| ACTTTGTTCTGTCACCTTCA+AGG | 0.433602 | 1_4:-38224041 | Msa0162060:CDS |
| CCAGGTTCCATTGCTGGGCT+AGG | 0.437394 | 1_4:+38224078 | None:intergenic |
| ATGTTCATGGGTGGTGGCAT+GGG | 0.437437 | 1_4:-38225563 | Msa0162060:CDS |
| TGAATATCTTGGCAATGAAA+AGG | 0.438416 | 1_4:-38226213 | Msa0162060:CDS |
| ATGGGTGGTGGCATGGGAGC+AGG | 0.440674 | 1_4:-38225557 | Msa0162060:CDS |
| CAACAAGAGGAAAATTCTAC+AGG | 0.441415 | 1_4:-38224664 | Msa0162060:CDS |
| AATGTTCATGGGTGGTGGCA+TGG | 0.442939 | 1_4:-38225564 | Msa0162060:CDS |
| CAAGTGTTCAGAAAGAGTTA+AGG | 0.445444 | 1_4:-38224017 | Msa0162060:CDS |
| CTCTATTGCACAGATGCTAT+TGG | 0.445603 | 1_4:-38224346 | Msa0162060:CDS |
| ATGGTGACCCCTAGAGTTAA+GGG | 0.446844 | 1_4:+38225031 | None:intergenic |
| GGTTCTGGCAGCAGCCATAT+TGG | 0.447845 | 1_4:+38223952 | None:intergenic |
| CTTTACATATATTAAATAAG+TGG | 0.451411 | 1_4:+38229379 | None:intergenic |
| TATATAAAGCCCTTAACTCT+AGG | 0.453952 | 1_4:-38225040 | Msa0162060:CDS |
| GAAGCTGAAAGAAATTCTAT+TGG | 0.458873 | 1_4:-38225961 | Msa0162060:CDS |
| CGCGGCAATCAAACCGGCAA+AGG | 0.461673 | 1_4:+38229043 | None:intergenic |
| TTCCATCTGTGAACTTTACA+AGG | 0.465735 | 1_4:-38224103 | Msa0162060:CDS |
| TTTACTAAGATAAGAAAGAA+AGG | 0.466255 | 1_4:-38223819 | Msa0162060:three_prime_UTR |
| CACAAAAGGTTCCCATGATA+AGG | 0.467626 | 1_4:+38224816 | None:intergenic |
| TGAACCTGACTAATAACAAA+TGG | 0.468847 | 1_4:+38226107 | None:intergenic |
| CCACCCATGAACATTAGAAC+TGG | 0.479997 | 1_4:+38225572 | None:intergenic |
| ATATAAAGCCCTTAACTCTA+GGG | 0.487320 | 1_4:-38225039 | Msa0162060:CDS |
| AAGTGTTCAGAAAGAGTTAA+GGG | 0.487553 | 1_4:-38224016 | Msa0162060:CDS |
| GAGTCCAGTTCTAATGTTCA+TGG | 0.488035 | 1_4:-38225576 | Msa0162060:CDS |
| GACAAGAGTGTTCTCTACTT+TGG | 0.492501 | 1_4:-38225675 | Msa0162060:CDS |
| GCAATAGTCTGCTCCACAAA+AGG | 0.495733 | 1_4:+38224802 | None:intergenic |
| CCACCGTCGACTCTTGCTTC+CGG | 0.496739 | 1_4:+38229003 | None:intergenic |
| AACAGGAGAGCTATTATGAC+AGG | 0.506463 | 1_4:-38224460 | Msa0162060:intron |
| TCATGGACGGTACCTTATCA+TGG | 0.507812 | 1_4:-38224828 | Msa0162060:CDS |
| GCAAACTTGTTGACAGTGCT+AGG | 0.509508 | 1_4:-38224369 | Msa0162060:CDS |
| GGCAATCAAACCGGCAAAGG+AGG | 0.512110 | 1_4:+38229046 | None:intergenic |
| AAGACAGTAACACTTGGTTC+TGG | 0.512285 | 1_4:+38223937 | None:intergenic |
| GTTCTAATGTTCATGGGTGG+TGG | 0.513078 | 1_4:-38225569 | Msa0162060:CDS |
| CTAGTTGGTGTGGTTTGTGA+TGG | 0.513280 | 1_4:-38224607 | Msa0162060:CDS |
| TCACAAACATAAGTACAGAA+TGG | 0.515042 | 1_4:-38224764 | Msa0162060:CDS |
| CCTAGCCCAGCAATGGAACC+TGG | 0.516557 | 1_4:-38224078 | Msa0162060:CDS |
| TCCTCTCACTGAGGGCCATG+GGG | 0.524414 | 1_4:+38225597 | None:intergenic |
| CCAACTAGCTCAATTCTGTA+AGG | 0.525410 | 1_4:+38224622 | None:intergenic |
| CCTTACAGAATTGAGCTAGT+TGG | 0.526663 | 1_4:-38224622 | Msa0162060:CDS |
| TAGAGATGATGCAGCATCAG+TGG | 0.527175 | 1_4:+38224885 | None:intergenic |
| CAGAATTGAGCTAGTTGGTG+TGG | 0.527716 | 1_4:-38224617 | Msa0162060:CDS |
| AGGAGCAGCTTCAAAGGCTG+TGG | 0.528800 | 1_4:-38225099 | Msa0162060:CDS |
| TTCAAAGGCTGTGGTTGTTG+AGG | 0.529864 | 1_4:-38225090 | Msa0162060:CDS |
| ACACAAAACAGCTTATTGGA+TGG | 0.530711 | 1_4:-38224209 | Msa0162060:intron |
| TTCCTTGTAAAGTTCACAGA+TGG | 0.536025 | 1_4:+38224101 | None:intergenic |
| GGAACCTGGTTCTGTTTGGA+AGG | 0.537364 | 1_4:-38224064 | Msa0162060:CDS |
| TTGGTTAGGAGCAGCTTCAA+AGG | 0.537556 | 1_4:-38225105 | Msa0162060:CDS |
| TGTGGAGCAGACTATTGCTA+TGG | 0.539450 | 1_4:-38224797 | Msa0162060:CDS |
| TATTGCACAGATGCTATTGG+TGG | 0.547648 | 1_4:-38224343 | Msa0162060:CDS |
| GTAACGCGAGGCAGCAGCCG+CGG | 0.551342 | 1_4:+38229025 | None:intergenic |
| CAGAACCAGGTTCCATTGCT+GGG | 0.554057 | 1_4:+38224073 | None:intergenic |
| AAATTCTATTGGCAGCTACA+AGG | 0.556844 | 1_4:-38225950 | Msa0162060:intron |
| CCACTTGATTTGAGTGCTAG+AGG | 0.560233 | 1_4:-38229297 | Msa0162060:five_prime_UTR |
| CAAAGGGCGAGATGTGATCA+TGG | 0.564773 | 1_4:-38224845 | Msa0162060:CDS |
| AATCTCAATCTCCAACAAGA+TGG | 0.565138 | 1_4:-38229205 | Msa0162060:exon |
| TCCCCATGGCCCTCAGTGAG+AGG | 0.570944 | 1_4:-38225598 | Msa0162060:CDS |
| TTCACAAACTAAAGAAGTCA+TGG | 0.573532 | 1_4:-38225621 | Msa0162060:CDS |
| AAGTCCTTCCAAACAGAACC+AGG | 0.574180 | 1_4:+38224060 | None:intergenic |
| AGTGCTAGAGGTAACAATCA+AGG | 0.575528 | 1_4:-38229285 | Msa0162060:five_prime_UTR |
| TGCTATTGGTGGTCCACCGA+AGG | 0.575982 | 1_4:-38224332 | Msa0162060:intron |
| TATGACAGGAAGGGCAGTGA+GGG | 0.577678 | 1_4:-38224446 | Msa0162060:CDS |
| GGAGAGCTATTATGACAGGA+AGG | 0.580051 | 1_4:-38224456 | Msa0162060:CDS |
| GAAAAGTTCTCCCACTATGT+TGG | 0.580569 | 1_4:-38228918 | Msa0162060:intron |
| CAAGGAACCTAGCCCAGCAA+TGG | 0.583071 | 1_4:-38224085 | Msa0162060:CDS |
| GCATTACATACCAACATAGT+GGG | 0.583296 | 1_4:+38228908 | None:intergenic |
| TACAATTAATGAAAATTACT+GGG | 0.585080 | 1_4:-38224713 | Msa0162060:CDS |
| AACTGGACTCCTCTCACTGA+GGG | 0.586342 | 1_4:+38225589 | None:intergenic |
| CAGCTTATTGGATGGAAGGA+GGG | 0.587320 | 1_4:-38224201 | Msa0162060:CDS |
| AAAACAGCTTATTGGATGGA+AGG | 0.588568 | 1_4:-38224205 | Msa0162060:intron |
| CAGAACATGTGTGAGGCGGA+CGG | 0.590928 | 1_4:+38229073 | None:intergenic |
| ATCTCCAACAAGATGGAGCA+AGG | 0.592137 | 1_4:-38229198 | Msa0162060:intron |
| TAGTGGCGGCTCTAAACAAA+GGG | 0.593741 | 1_4:-38224861 | Msa0162060:CDS |
| CTTCATAAGACAGTAACACT+TGG | 0.596432 | 1_4:+38223931 | None:intergenic |
| TGCATCATCTCTACTAGTGG+CGG | 0.597453 | 1_4:-38224875 | Msa0162060:CDS |
| TAAAGAAGTCATGGTCCCCA+TGG | 0.598959 | 1_4:-38225612 | Msa0162060:CDS |
| TGCTGCATCATCTCTACTAG+TGG | 0.599865 | 1_4:-38224878 | Msa0162060:CDS |
| AGTCCAGTTCTAATGTTCAT+GGG | 0.602486 | 1_4:-38225575 | Msa0162060:CDS |
| CATGGACGGTACCTTATCAT+GGG | 0.602582 | 1_4:-38224827 | Msa0162060:CDS |
| AACAAGAGGAAAATTCTACA+GGG | 0.606029 | 1_4:-38224663 | Msa0162060:CDS |
| AGCAGAAGAACATCAACAAG+AGG | 0.607492 | 1_4:-38224677 | Msa0162060:CDS |
| GAGATGAAAGTAATAAATGG+TGG | 0.609786 | 1_4:-38225647 | Msa0162060:CDS |
| CCTCTAGCACTCAAATCAAG+TGG | 0.612479 | 1_4:+38229297 | None:intergenic |
| CAGTTTGAAGCATGTCAGCA+TGG | 0.615090 | 1_4:+38225012 | None:intergenic |
| AGCATTACATACCAACATAG+TGG | 0.615576 | 1_4:+38228907 | None:intergenic |
| ACAGCTTATTGGATGGAAGG+AGG | 0.616233 | 1_4:-38224202 | Msa0162060:intron |
| TGGGCAAGTATGCATAACTC+TGG | 0.617131 | 1_4:+38226278 | None:intergenic |
| GAGAGCTATTATGACAGGAA+GGG | 0.618202 | 1_4:-38224455 | Msa0162060:CDS |
| GGATATAAAGTAGCTGCGGA+TGG | 0.621827 | 1_4:-38224736 | Msa0162060:CDS |
| CTCTTGCTTCCGGTAACGCG+AGG | 0.623457 | 1_4:+38229013 | None:intergenic |
| TGTTCACATACAGGAAACAA+AGG | 0.629269 | 1_4:-38225727 | Msa0162060:intron |
| GGGCGAGATGTGATCATGGA+CGG | 0.630170 | 1_4:-38224841 | Msa0162060:CDS |
| CTAGTGGCGGCTCTAAACAA+AGG | 0.630500 | 1_4:-38224862 | Msa0162060:CDS |
| AGGATTTGAAGATGCAAGTG+AGG | 0.631153 | 1_4:-38226303 | Msa0162060:CDS |
| GAGAGTAACCAAGAATCTGA+AGG | 0.632638 | 1_4:-38225699 | Msa0162060:CDS |
| CTTTGCCGGTTTGATTGCCG+CGG | 0.633840 | 1_4:-38229042 | Msa0162060:CDS |
| AATCTACTAGAGGATCCTGT+AGG | 0.641211 | 1_4:-38224171 | Msa0162060:CDS |
| CCAGTTCTAATGTTCATGGG+TGG | 0.641784 | 1_4:-38225572 | Msa0162060:CDS |
| TATAAAGCCCTTAACTCTAG+GGG | 0.644037 | 1_4:-38225038 | Msa0162060:CDS |
| CAGCCAGAACATGTGTGAGG+CGG | 0.646050 | 1_4:+38229069 | None:intergenic |
| GGGTGATCACAATCTACTAG+AGG | 0.647681 | 1_4:-38224181 | Msa0162060:CDS |
| AATGAAATGCAAAATAACTG+AGG | 0.656048 | 1_4:+38226141 | None:intergenic |
| TTACCGGAAGCAAGAGTCGA+CGG | 0.658682 | 1_4:-38229006 | Msa0162060:CDS |
| ACAAACATAAGTACAGAATG+GGG | 0.664528 | 1_4:-38224762 | Msa0162060:CDS |
| AGGCAGCCAGAACATGTGTG+AGG | 0.672431 | 1_4:+38229066 | None:intergenic |
| GAACTGGACTCCTCTCACTG+AGG | 0.673724 | 1_4:+38225588 | None:intergenic |
| GGTAGGATATAAAGTAGCTG+CGG | 0.692491 | 1_4:-38224740 | Msa0162060:CDS |
| ACAAGAGGAAAATTCTACAG+GGG | 0.709176 | 1_4:-38224662 | Msa0162060:CDS |
| TTATGACAGGAAGGGCAGTG+AGG | 0.719044 | 1_4:-38224447 | Msa0162060:CDS |
| CAAACATAAGTACAGAATGG+GGG | 0.724586 | 1_4:-38224761 | Msa0162060:CDS |
| CCGGAAGCAAGAGTCGACGG+TGG | 0.756030 | 1_4:-38229003 | Msa0162060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCTATAAATATTTATGT+CGG | - | chr1_4:38224759-38224778 | Msa0162060:CDS | 10.0% |
| !!! | TTTTAATTAACAATTTATGT+GGG | + | chr1_4:38224835-38224854 | None:intergenic | 10.0% |
| !! | AAAATTAAATGATTTGAATT+GGG | + | chr1_4:38225636-38225655 | None:intergenic | 10.0% |
| !! | AAAAATTAAATGATTTGAAT+TGG | + | chr1_4:38225637-38225656 | None:intergenic | 10.0% |
| !! | ATTCAAAACAATTTATTATT+AGG | + | chr1_4:38225799-38225818 | None:intergenic | 10.0% |
| !!! | AGGTTTTTTTTTTTTTTTTA+TGG | - | chr1_4:38229359-38229378 | Msa0162060:five_prime_UTR | 10.0% |
| !!! | GGTTTTTTTTTTTTTTTTAT+GGG | - | chr1_4:38229360-38229379 | Msa0162060:five_prime_UTR | 10.0% |
| !! | CTTTACATATATTAAATAAG+TGG | + | chr1_4:38223782-38223801 | None:intergenic | 15.0% |
| !! | AAATCACTACTATAATATAA+AGG | - | chr1_4:38224532-38224551 | Msa0162060:intron | 15.0% |
| !! | AAAAGAAAATTCTCATATTA+TGG | - | chr1_4:38224580-38224599 | Msa0162060:CDS | 15.0% |
| !! | AAAGAAAATTCTCATATTAT+GGG | - | chr1_4:38224581-38224600 | Msa0162060:CDS | 15.0% |
| !! | ATCAAAAAATTGTAACAAAA+TGG | - | chr1_4:38224696-38224715 | Msa0162060:CDS | 15.0% |
| !!! | CTTTTAATTAACAATTTATG+TGG | + | chr1_4:38224836-38224855 | None:intergenic | 15.0% |
| !! | ATACCCAAATAAATATTATT+TGG | - | chr1_4:38225061-38225080 | Msa0162060:CDS | 15.0% |
| !! | TACCCAAATAAATATTATTT+GGG | - | chr1_4:38225062-38225081 | Msa0162060:CDS | 15.0% |
| !! | ACATTAAGTAAGTATATTAA+CGG | - | chr1_4:38225473-38225492 | Msa0162060:intron | 15.0% |
| !! | AAATTAAATGATTTGAATTG+GGG | + | chr1_4:38225635-38225654 | None:intergenic | 15.0% |
| !! | AATCATTTGAATTAACTAAA+TGG | - | chr1_4:38225672-38225691 | Msa0162060:CDS | 15.0% |
| !!! | TTCAAAACAACTTTTTTTTT+AGG | + | chr1_4:38225823-38225842 | None:intergenic | 15.0% |
| !! | AACTTTAGTCTATAAAAATT+AGG | - | chr1_4:38225917-38225936 | Msa0162060:intron | 15.0% |
| !!! | CAAAATTCAGAATTTTAATT+TGG | - | chr1_4:38226797-38226816 | Msa0162060:intron | 15.0% |
| !! | TTATGCCTAAATAAATATTA+TGG | - | chr1_4:38228015-38228034 | Msa0162060:intron | 15.0% |
| !! | TACAATTAATGAAAATTACT+GGG | - | chr1_4:38228445-38228464 | Msa0162060:intron | 15.0% |
| !! | ACTATATTAATATACTTTAG+TGG | - | chr1_4:38228625-38228644 | Msa0162060:intron | 15.0% |
| !!! | TTTTTTTTTTTTATGGGTTT+TGG | - | chr1_4:38229366-38229385 | Msa0162060:five_prime_UTR | 15.0% |
| !! | TATGTAAAGTAGATGAAATA+TGG | - | chr1_4:38223793-38223812 | Msa0162060:three_prime_UTR | 20.0% |
| !! | AAAGAAAAAAAAGTAGTGTA+AGG | - | chr1_4:38224457-38224476 | Msa0162060:CDS | 20.0% |
| !!! | TTCTTTTGAAGGATAATTTT+AGG | + | chr1_4:38224567-38224586 | None:intergenic | 20.0% |
| !!! | ATATGAGAATTTTCTTTTGA+AGG | + | chr1_4:38224578-38224597 | None:intergenic | 20.0% |
| !! | AAGAAAATTCTCATATTATG+GGG | - | chr1_4:38224582-38224601 | Msa0162060:CDS | 20.0% |
| !! | AAAGAAAGATAATTCAAAAC+AGG | - | chr1_4:38224999-38225018 | Msa0162060:intron | 20.0% |
| !! | AAGAAAGATAATTCAAAACA+GGG | - | chr1_4:38225000-38225019 | Msa0162060:intron | 20.0% |
| !! | TGCCCAAATAATATTTATTT+GGG | + | chr1_4:38225067-38225086 | None:intergenic | 20.0% |
| !! | TACCTAAATCAACATTATTT+GGG | + | chr1_4:38225176-38225195 | None:intergenic | 20.0% |
| !! | ATACCTAAATCAACATTATT+TGG | + | chr1_4:38225177-38225196 | None:intergenic | 20.0% |
| !!! | AACATGTGTCATATTTTTAT+TGG | + | chr1_4:38225273-38225292 | None:intergenic | 20.0% |
| !!! | ACATTAACTATTTTCATACA+AGG | - | chr1_4:38225421-38225440 | Msa0162060:intron | 20.0% |
| !! | CATTAAGTAAGTATATTAAC+GGG | - | chr1_4:38225474-38225493 | Msa0162060:intron | 20.0% |
| !! | TGAATTAACTAAATGGAAAT+TGG | - | chr1_4:38225679-38225698 | Msa0162060:CDS | 20.0% |
| !!! | TTAAGCTTTGAATATTTGAT+AGG | + | chr1_4:38225875-38225894 | None:intergenic | 20.0% |
| !! | TAACTTAATTAAGACTATCT+TGG | + | chr1_4:38226008-38226027 | None:intergenic | 20.0% |
| !! | TGTTTACAAATTTACTCTAA+AGG | + | chr1_4:38226090-38226109 | None:intergenic | 20.0% |
| !! | ACGAATGTAATAAAAAATAG+CGG | - | chr1_4:38226191-38226210 | Msa0162060:CDS | 20.0% |
| !! | TAAGAACAAAAATATCAACA+AGG | + | chr1_4:38226282-38226301 | None:intergenic | 20.0% |
| !! | AACATTAATATCTCATTGAA+GGG | + | chr1_4:38226344-38226363 | None:intergenic | 20.0% |
| !! | TTTCAAAACATTTAAAAGAG+TGG | + | chr1_4:38226671-38226690 | None:intergenic | 20.0% |
| !!! | TATAATGATGTGACATTTTA+AGG | + | chr1_4:38227326-38227345 | None:intergenic | 20.0% |
| !! | CAAAGCCATAATATTTATTT+AGG | + | chr1_4:38228023-38228042 | None:intergenic | 20.0% |
| !! | CTAAATAAATATTATGGCTT+TGG | - | chr1_4:38228021-38228040 | Msa0162060:intron | 20.0% |
| !! | GTACAATTAATGAAAATTAC+TGG | - | chr1_4:38228444-38228463 | Msa0162060:intron | 20.0% |
| !!! | TATAGTTAACATTTTCCTTT+TGG | - | chr1_4:38228669-38228688 | Msa0162060:intron | 20.0% |
| !! | AAGTGTGATGTTATAAAAAA+AGG | - | chr1_4:38229247-38229266 | Msa0162060:five_prime_UTR | 20.0% |
| !! | AGTGTGATGTTATAAAAAAA+GGG | - | chr1_4:38229248-38229267 | Msa0162060:five_prime_UTR | 20.0% |
| !! | TAAAAAAAGGGAAATGTTAA+CGG | - | chr1_4:38229260-38229279 | Msa0162060:five_prime_UTR | 20.0% |
| !! | TTTACTAAGATAAGAAAGAA+AGG | - | chr1_4:38229339-38229358 | Msa0162060:five_prime_UTR | 20.0% |
| !!! | AGTTCATAATGTTTTTCAGA+TGG | - | chr1_4:38224051-38224070 | Msa0162060:CDS | 25.0% |
| !!! | TAATGTTTTTCAGATGGTAT+TGG | - | chr1_4:38224057-38224076 | Msa0162060:CDS | 25.0% |
| !!! | ATGTAATGCTTCACTTTTTT+TGG | - | chr1_4:38224264-38224283 | Msa0162060:intron | 25.0% |
| !!! | TGTAATGCTTCACTTTTTTT+GGG | - | chr1_4:38224265-38224284 | Msa0162060:intron | 25.0% |
| !! | ATTCATTTCTCTTTTGTTAG+AGG | - | chr1_4:38224735-38224754 | Msa0162060:CDS | 25.0% |
| !! | TTCATTTCTCTTTTGTTAGA+GGG | - | chr1_4:38224736-38224755 | Msa0162060:CDS | 25.0% |
| !!! | ATATTTATGTCGGTGTTTTT+TGG | - | chr1_4:38224769-38224788 | Msa0162060:CDS | 25.0% |
| ! | AGAAAGATAATTCAAAACAG+GGG | - | chr1_4:38225001-38225020 | Msa0162060:intron | 25.0% |
| ! | GTGCCCAAATAATATTTATT+TGG | + | chr1_4:38225068-38225087 | None:intergenic | 25.0% |
| ! | TGGTGTAAGAATAATATCTT+AGG | + | chr1_4:38225249-38225268 | None:intergenic | 25.0% |
| !!! | TGTGTCATATTTTTATTGGT+TGG | + | chr1_4:38225269-38225288 | None:intergenic | 25.0% |
| ! | TTGAAATTTCGATACATTGA+AGG | - | chr1_4:38225574-38225593 | Msa0162060:CDS | 25.0% |
| ! | AAGGAATATTGTAGATACAA+CGG | - | chr1_4:38225593-38225612 | Msa0162060:CDS | 25.0% |
| !! | AACTAAATGGAAATTGGTTT+AGG | - | chr1_4:38225685-38225704 | Msa0162060:CDS | 25.0% |
| !! | TATCTGACGTTAATTTGATT+GGG | + | chr1_4:38225763-38225782 | None:intergenic | 25.0% |
| !! | ATATCTGACGTTAATTTGAT+TGG | + | chr1_4:38225764-38225783 | None:intergenic | 25.0% |
| ! | ATCACAAGAATTAAGAAAGT+TGG | + | chr1_4:38226144-38226163 | None:intergenic | 25.0% |
| ! | CGAATGTAATAAAAAATAGC+GGG | - | chr1_4:38226192-38226211 | Msa0162060:CDS | 25.0% |
| ! | CAACATTAATATCTCATTGA+AGG | + | chr1_4:38226345-38226364 | None:intergenic | 25.0% |
| !! | CATATTCTAGAAAATCAGTA+AGG | - | chr1_4:38226365-38226384 | Msa0162060:intron | 25.0% |
| ! | AATGAAATGCAAAATAACTG+AGG | + | chr1_4:38227020-38227039 | None:intergenic | 25.0% |
| !!! | TCAGTTATTTTGCATTTCAT+TGG | - | chr1_4:38227019-38227038 | Msa0162060:intron | 25.0% |
| ! | TTATAGAGTTAGACAATTCA+AGG | - | chr1_4:38227341-38227360 | Msa0162060:intron | 25.0% |
| ! | GAAGAGATGAAAGTAATAAA+TGG | - | chr1_4:38227508-38227527 | Msa0162060:intron | 25.0% |
| !!! | ATACATGCATTTTTTGTGAA+AGG | - | chr1_4:38227922-38227941 | Msa0162060:intron | 25.0% |
| ! | AAACATTTCAAAATCTGAAC+AGG | - | chr1_4:38228238-38228257 | Msa0162060:intron | 25.0% |
| !!! | TTTCCTTTTGGAATTTTAAC+AGG | - | chr1_4:38228681-38228700 | Msa0162060:intron | 25.0% |
| !! | TCAACAAGTTTGCAATATTT+TGG | + | chr1_4:38228782-38228801 | None:intergenic | 25.0% |
| ! | AAAAAAAGGGAAATGTTAAC+GGG | - | chr1_4:38229261-38229280 | Msa0162060:five_prime_UTR | 25.0% |
| ! | GATTCTGTTTTATCAACTTG+AGG | + | chr1_4:38224201-38224220 | None:intergenic | 30.0% |
| !! | CAAGTTGATAAAACAGAATC+TGG | - | chr1_4:38224201-38224220 | Msa0162060:CDS | 30.0% |
| ACAGTGAGATTGAAAAAGAA+AGG | + | chr1_4:38224320-38224339 | None:intergenic | 30.0% | |
| !! | TGCCCAAATAATGTTGATTT+AGG | - | chr1_4:38225171-38225190 | Msa0162060:intron | 30.0% |
| TCAATGGAAAAAGTCTTTCA+TGG | + | chr1_4:38225204-38225223 | None:intergenic | 30.0% | |
| TTCATGCAAGAATATCTCAA+TGG | + | chr1_4:38225220-38225239 | None:intergenic | 30.0% | |
| ! | ATAGTTAATGTCAGTGTTGA+AGG | + | chr1_4:38225412-38225431 | None:intergenic | 30.0% |
| ! | AAATGGAAATTGGTTTAGGT+AGG | - | chr1_4:38225689-38225708 | Msa0162060:CDS | 30.0% |
| AACAAGGTCATTCTTTACTA+GGG | + | chr1_4:38226266-38226285 | None:intergenic | 30.0% | |
| AATTGTTGCCATATACTAGT+AGG | - | chr1_4:38226303-38226322 | Msa0162060:CDS | 30.0% | |
| AAAGCTTACCTACTAGTATA+TGG | + | chr1_4:38226314-38226333 | None:intergenic | 30.0% | |
| ! | TATACTAGTAGGTAAGCTTT+TGG | - | chr1_4:38226314-38226333 | Msa0162060:CDS | 30.0% |
| TTAATATCTCATTGAAGGGA+GGG | + | chr1_4:38226340-38226359 | None:intergenic | 30.0% | |
| ATTAATATCTCATTGAAGGG+AGG | + | chr1_4:38226341-38226360 | None:intergenic | 30.0% | |
| GAACTAAAAAATTGCATTGG+AGG | - | chr1_4:38226524-38226543 | Msa0162060:intron | 30.0% | |
| TAAAAAATTGCATTGGAGGA+GGG | - | chr1_4:38226528-38226547 | Msa0162060:intron | 30.0% | |
| ! | GGATTTTTGCAGATATTCTT+GGG | + | chr1_4:38226902-38226921 | None:intergenic | 30.0% |
| ! | TGGATTTTTGCAGATATTCT+TGG | + | chr1_4:38226903-38226922 | None:intergenic | 30.0% |
| GAATATCTGCAAAAATCCAA+AGG | - | chr1_4:38226904-38226923 | Msa0162060:intron | 30.0% | |
| ! | CAAAGCATCTTTGAATATCT+TGG | - | chr1_4:38226934-38226953 | Msa0162060:intron | 30.0% |
| TGAATATCTTGGCAATGAAA+AGG | - | chr1_4:38226945-38226964 | Msa0162060:intron | 30.0% | |
| TGAATCTCTCTATGTCAAAT+TGG | - | chr1_4:38226972-38226991 | Msa0162060:intron | 30.0% | |
| TGAACCTGACTAATAACAAA+TGG | + | chr1_4:38227054-38227073 | None:intergenic | 30.0% | |
| ACATACTCAATACTTAACTG+AGG | + | chr1_4:38227127-38227146 | None:intergenic | 30.0% | |
| GTATTGAGTATGTCTTTCTT+CGG | - | chr1_4:38227134-38227153 | Msa0162060:intron | 30.0% | |
| ! | AGTTTTCAGTACCTAGAATT+TGG | + | chr1_4:38227160-38227179 | None:intergenic | 30.0% |
| GAAGCTGAAAGAAATTCTAT+TGG | - | chr1_4:38227197-38227216 | Msa0162060:intron | 30.0% | |
| GAGATGAAAGTAATAAATGG+TGG | - | chr1_4:38227511-38227530 | Msa0162060:intron | 30.0% | |
| TTCACAAACTAAAGAAGTCA+TGG | - | chr1_4:38227537-38227556 | Msa0162060:intron | 30.0% | |
| ATAATCCAACAATCGAATTG+AGG | + | chr1_4:38227775-38227794 | None:intergenic | 30.0% | |
| GATTATTTAGTGTCTGCATT+TGG | - | chr1_4:38227789-38227808 | Msa0162060:intron | 30.0% | |
| TATATAAAGCCCTTAACTCT+AGG | - | chr1_4:38228118-38228137 | Msa0162060:intron | 30.0% | |
| ATATAAAGCCCTTAACTCTA+GGG | - | chr1_4:38228119-38228138 | Msa0162060:intron | 30.0% | |
| TCACAAACATAAGTACAGAA+TGG | - | chr1_4:38228394-38228413 | Msa0162060:intron | 30.0% | |
| CACAAACATAAGTACAGAAT+GGG | - | chr1_4:38228395-38228414 | Msa0162060:intron | 30.0% | |
| ACAAACATAAGTACAGAATG+GGG | - | chr1_4:38228396-38228415 | Msa0162060:intron | 30.0% | |
| AACAAGAGGAAAATTCTACA+GGG | - | chr1_4:38228495-38228514 | Msa0162060:intron | 30.0% | |
| ATTAGGTGTATATATGCTTG+TGG | - | chr1_4:38228596-38228615 | Msa0162060:intron | 30.0% | |
| TCTCCTGTTAAAATTCCAAA+AGG | + | chr1_4:38228687-38228706 | None:intergenic | 30.0% | |
| TGTAAAATCAAACACAAGCA+AGG | + | chr1_4:38228871-38228890 | None:intergenic | 30.0% | |
| TTTCACACAAAACAGCTTAT+TGG | - | chr1_4:38228945-38228964 | Msa0162060:CDS | 30.0% | |
| AAAAGCTTGAAAAATGTAGC+AGG | - | chr1_4:38229014-38229033 | Msa0162060:CDS | 30.0% | |
| AAGTGTTCAGAAAGAGTTAA+GGG | - | chr1_4:38229142-38229161 | Msa0162060:intron | 30.0% | |
| !!! | GGACTTCTCTATTTTTTGAA+TGG | + | chr1_4:38229171-38229190 | None:intergenic | 30.0% |
| ! | TATTGGTCACATTTTTCTGA+TGG | + | chr1_4:38229192-38229211 | None:intergenic | 30.0% |
| TCAGAAAAATGTGACCAATA+TGG | - | chr1_4:38229192-38229211 | Msa0162060:intron | 30.0% | |
| AAAAAAGGGAAATGTTAACG+GGG | - | chr1_4:38229262-38229281 | Msa0162060:five_prime_UTR | 30.0% | |
| !!! | TTTTATGGGTTTTGGACTTT+TGG | - | chr1_4:38229374-38229393 | Msa0162060:five_prime_UTR | 30.0% |
| AATCTCAATCTCCAACAAGA+TGG | - | chr1_4:38223953-38223972 | Msa0162060:three_prime_UTR | 35.0% | |
| TAAAACAGAATCTGGTCGTT+TGG | - | chr1_4:38224209-38224228 | Msa0162060:intron | 35.0% | |
| GCATTACATACCAACATAGT+GGG | + | chr1_4:38224253-38224272 | None:intergenic | 35.0% | |
| AGCATTACATACCAACATAG+TGG | + | chr1_4:38224254-38224273 | None:intergenic | 35.0% | |
| !!! | GAGTTTTGAGGCTATCATTT+TGG | + | chr1_4:38224412-38224431 | None:intergenic | 35.0% |
| ! | AATACACCACTTGAGTTTTG+AGG | + | chr1_4:38224424-38224443 | None:intergenic | 35.0% |
| AGTGGTGTATTAGTCAAAAG+AGG | - | chr1_4:38224433-38224452 | Msa0162060:CDS | 35.0% | |
| !!! | TTTTGAAACTCGACGAACAA+AGG | + | chr1_4:38224807-38224826 | None:intergenic | 35.0% |
| ATCTGCAAAATCAACTGTGT+TGG | - | chr1_4:38224940-38224959 | Msa0162060:intron | 35.0% | |
| !! | ACAGGGGTAATAGTCATTTT+CGG | - | chr1_4:38225017-38225036 | Msa0162060:CDS | 35.0% |
| GATAGATTGAAAAACGACTC+TGG | + | chr1_4:38225323-38225342 | None:intergenic | 35.0% | |
| TGGTGAATGACAGAATTCAT+TGG | + | chr1_4:38225988-38226007 | None:intergenic | 35.0% | |
| ! | GTAATAAAAAATAGCGGGAC+AGG | - | chr1_4:38226197-38226216 | Msa0162060:CDS | 35.0% |
| CAACAAGGTCATTCTTTACT+AGG | + | chr1_4:38226267-38226286 | None:intergenic | 35.0% | |
| TGGAAGAAATAGAGGAAACT+GGG | - | chr1_4:38226442-38226461 | Msa0162060:intron | 35.0% | |
| AATACTAAACCCTCCTCATT+TGG | - | chr1_4:38226499-38226518 | Msa0162060:intron | 35.0% | |
| ATACTAAACCCTCCTCATTT+GGG | - | chr1_4:38226500-38226519 | Msa0162060:intron | 35.0% | |
| !!! | TTTTTTAGTTCCCCCAAATG+AGG | + | chr1_4:38226515-38226534 | None:intergenic | 35.0% |
| GGGGAACTAAAAAATTGCAT+TGG | - | chr1_4:38226521-38226540 | Msa0162060:intron | 35.0% | |
| CTAAAAAATTGCATTGGAGG+AGG | - | chr1_4:38226527-38226546 | Msa0162060:intron | 35.0% | |
| GTGGAAAATATGAGGGAAAA+TGG | + | chr1_4:38226701-38226720 | None:intergenic | 35.0% | |
| ATTCAGCTGCATTTCATCTT+AGG | + | chr1_4:38226770-38226789 | None:intergenic | 35.0% | |
| !! | AGCTCCATTTGTTATTAGTC+AGG | - | chr1_4:38227047-38227066 | Msa0162060:intron | 35.0% |
| AAATTCTATTGGCAGCTACA+AGG | - | chr1_4:38227208-38227227 | Msa0162060:intron | 35.0% | |
| TGCTGTATATGTTCACATAC+AGG | - | chr1_4:38227422-38227441 | Msa0162060:intron | 35.0% | |
| TGTTCACATACAGGAAACAA+AGG | - | chr1_4:38227431-38227450 | Msa0162060:intron | 35.0% | |
| ! | AGTCCAGTTCTAATGTTCAT+GGG | - | chr1_4:38227583-38227602 | Msa0162060:intron | 35.0% |
| TTTGGATCAATCCAACTATG+AGG | - | chr1_4:38227807-38227826 | Msa0162060:intron | 35.0% | |
| TCATATGTATGACACACGTT+TGG | + | chr1_4:38227858-38227877 | None:intergenic | 35.0% | |
| !!! | TTTGGCAGATCATTTTGGTT+AGG | - | chr1_4:38228039-38228058 | Msa0162060:intron | 35.0% |
| TATAAAGCCCTTAACTCTAG+GGG | - | chr1_4:38228120-38228139 | Msa0162060:intron | 35.0% | |
| ACCTTCATGCAATGTTACTA+TGG | - | chr1_4:38228201-38228220 | Msa0162060:intron | 35.0% | |
| ACCATAGTAACATTGCATGA+AGG | + | chr1_4:38228205-38228224 | None:intergenic | 35.0% | |
| CAAACATAAGTACAGAATGG+GGG | - | chr1_4:38228397-38228416 | Msa0162060:intron | 35.0% | |
| CAACAAGAGGAAAATTCTAC+AGG | - | chr1_4:38228494-38228513 | Msa0162060:intron | 35.0% | |
| ACAAGAGGAAAATTCTACAG+GGG | - | chr1_4:38228496-38228515 | Msa0162060:intron | 35.0% | |
| GGATATCTTGCAGTTATTAG+AGG | - | chr1_4:38228572-38228591 | Msa0162060:intron | 35.0% | |
| !! | TTGCAGTTATTAGAGGCATT+AGG | - | chr1_4:38228579-38228598 | Msa0162060:intron | 35.0% |
| !!! | GGTGTGATTTTTTGTTATGC+TGG | - | chr1_4:38228646-38228665 | Msa0162060:intron | 35.0% |
| CACAATTGCAATCTCACAAA+AGG | - | chr1_4:38228741-38228760 | Msa0162060:intron | 35.0% | |
| ACACAAAACAGCTTATTGGA+TGG | - | chr1_4:38228949-38228968 | Msa0162060:CDS | 35.0% | |
| AAAACAGCTTATTGGATGGA+AGG | - | chr1_4:38228953-38228972 | Msa0162060:CDS | 35.0% | |
| ! | TTCAAGCTTTTGATACCTAC+AGG | + | chr1_4:38229005-38229024 | None:intergenic | 35.0% |
| TTCCATCTGTGAACTTTACA+AGG | - | chr1_4:38229055-38229074 | Msa0162060:CDS | 35.0% | |
| TTCCTTGTAAAGTTCACAGA+TGG | + | chr1_4:38229060-38229079 | None:intergenic | 35.0% | |
| CAAGTGTTCAGAAAGAGTTA+AGG | - | chr1_4:38229141-38229160 | Msa0162060:intron | 35.0% | |
| CTTCATAAGACAGTAACACT+TGG | + | chr1_4:38229230-38229249 | None:intergenic | 35.0% | |
| AAAAAGGGAAATGTTAACGG+GGG | - | chr1_4:38229263-38229282 | Msa0162060:five_prime_UTR | 35.0% | |
| AGTGCTAGAGGTAACAATCA+AGG | - | chr1_4:38223873-38223892 | Msa0162060:intron | 40.0% | |
| !! | CTTTGGCTCTAGTCTATTTG+TGG | - | chr1_4:38223915-38223934 | Msa0162060:intron | 40.0% |
| AATACCTTGCTCCATCTTGT+TGG | + | chr1_4:38223967-38223986 | None:intergenic | 40.0% | |
| GAAAAGTTCTCCCACTATGT+TGG | - | chr1_4:38224240-38224259 | Msa0162060:intron | 40.0% | |
| TGATAGCCTCAAAACTCAAG+TGG | - | chr1_4:38224415-38224434 | Msa0162060:CDS | 40.0% | |
| !! | CAGGGGTAATAGTCATTTTC+GGG | - | chr1_4:38225018-38225037 | Msa0162060:CDS | 40.0% |
| AACGTCAGATATCACATCAC+TGG | - | chr1_4:38225772-38225791 | Msa0162060:intron | 40.0% | |
| AGGTCATTCTTTACTAGGGA+TGG | + | chr1_4:38226262-38226281 | None:intergenic | 40.0% | |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | - | chr1_4:38226383-38226402 | Msa0162060:intron | 40.0% |
| GTGGAAGAAATAGAGGAAAC+TGG | - | chr1_4:38226441-38226460 | Msa0162060:intron | 40.0% | |
| AAGAAATAGAGGAAACTGGG+AGG | - | chr1_4:38226445-38226464 | Msa0162060:intron | 40.0% | |
| AGAAATAGAGGAAACTGGGA+GGG | - | chr1_4:38226446-38226465 | Msa0162060:intron | 40.0% | |
| AAGAAAAGTTAACCCCCCAA+AGG | + | chr1_4:38226476-38226495 | None:intergenic | 40.0% | |
| TACTAAACCCTCCTCATTTG+GGG | - | chr1_4:38226501-38226520 | Msa0162060:intron | 40.0% | |
| TTGAGGGGTGGAAAATATGA+GGG | + | chr1_4:38226708-38226727 | None:intergenic | 40.0% | |
| TTTGAGGGGTGGAAAATATG+AGG | + | chr1_4:38226709-38226728 | None:intergenic | 40.0% | |
| !! | TTAGGCTTTGTTTGCGAGTT+TGG | + | chr1_4:38226752-38226771 | None:intergenic | 40.0% |
| AGGATTTGAAGATGCAAGTG+AGG | - | chr1_4:38226855-38226874 | Msa0162060:intron | 40.0% | |
| GATGCTTTGATCACATCCTT+TGG | + | chr1_4:38226923-38226942 | None:intergenic | 40.0% | |
| TCTTTCTTCGGCCAAATTCT+AGG | - | chr1_4:38227146-38227165 | Msa0162060:intron | 40.0% | |
| GAGAGTAACCAAGAATCTGA+AGG | - | chr1_4:38227459-38227478 | Msa0162060:intron | 40.0% | |
| TCTTGTCACCTTCAGATTCT+TGG | + | chr1_4:38227470-38227489 | None:intergenic | 40.0% | |
| !! | GACAAGAGTGTTCTCTACTT+TGG | - | chr1_4:38227483-38227502 | Msa0162060:intron | 40.0% |
| ! | GAGTCCAGTTCTAATGTTCA+TGG | - | chr1_4:38227582-38227601 | Msa0162060:intron | 40.0% |
| AAACCTGCGAGAGTAGAATT+AGG | + | chr1_4:38227675-38227694 | None:intergenic | 40.0% | |
| ATCAATCCAACTATGAGGTG+CGG | - | chr1_4:38227812-38227831 | Msa0162060:intron | 40.0% | |
| TTTGCAAGACTCATGCATAC+AGG | + | chr1_4:38227886-38227905 | None:intergenic | 40.0% | |
| ACAAAGTAAGCAGGCATGTA+TGG | + | chr1_4:38227979-38227998 | None:intergenic | 40.0% | |
| GCTCTTACTACAAAGTAAGC+AGG | + | chr1_4:38227988-38228007 | None:intergenic | 40.0% | |
| !!! | ATGGCTTTGGCAGATCATTT+TGG | - | chr1_4:38228034-38228053 | Msa0162060:intron | 40.0% |
| ! | TGTTGAGGCAGATGCTTTTA+AGG | - | chr1_4:38228083-38228102 | Msa0162060:intron | 40.0% |
| CATGCTTCAAACTGCTGAAT+TGG | - | chr1_4:38228155-38228174 | Msa0162060:intron | 40.0% | |
| CACAAAAGGTTCCCATGATA+AGG | + | chr1_4:38228345-38228364 | None:intergenic | 40.0% | |
| ! | CTTATCATGGGAACCTTTTG+TGG | - | chr1_4:38228343-38228362 | Msa0162060:intron | 40.0% |
| GGTAGGATATAAAGTAGCTG+CGG | - | chr1_4:38228418-38228437 | Msa0162060:intron | 40.0% | |
| TGTTCTTCTGCTTCATTCAC+TGG | + | chr1_4:38228473-38228492 | None:intergenic | 40.0% | |
| AGCAGAAGAACATCAACAAG+AGG | - | chr1_4:38228481-38228500 | Msa0162060:intron | 40.0% | |
| CCAACTAGCTCAATTCTGTA+AGG | + | chr1_4:38228539-38228558 | None:intergenic | 40.0% | |
| CCTTACAGAATTGAGCTAGT+TGG | - | chr1_4:38228536-38228555 | Msa0162060:intron | 40.0% | |
| AACAGGAGAGCTATTATGAC+AGG | - | chr1_4:38228698-38228717 | Msa0162060:intron | 40.0% | |
| GAGAGCTATTATGACAGGAA+GGG | - | chr1_4:38228703-38228722 | Msa0162060:intron | 40.0% | |
| CTCTATTGCACAGATGCTAT+TGG | - | chr1_4:38228812-38228831 | Msa0162060:intron | 40.0% | |
| TATTGCACAGATGCTATTGG+TGG | - | chr1_4:38228815-38228834 | Msa0162060:intron | 40.0% | |
| !!! | GTTGCTCCTGTTTTTACCTT+CGG | + | chr1_4:38228845-38228864 | None:intergenic | 40.0% |
| AATCTACTAGAGGATCCTGT+AGG | - | chr1_4:38228987-38229006 | Msa0162060:CDS | 40.0% | |
| ACTTTGTTCTGTCACCTTCA+AGG | - | chr1_4:38229117-38229136 | Msa0162060:intron | 40.0% | |
| TTCTGAACACTTGACCTTGA+AGG | + | chr1_4:38229134-38229153 | None:intergenic | 40.0% | |
| AAGACAGTAACACTTGGTTC+TGG | + | chr1_4:38229224-38229243 | None:intergenic | 40.0% | |
| CCTCTAGCACTCAAATCAAG+TGG | + | chr1_4:38223864-38223883 | None:intergenic | 45.0% | |
| ! | CCACTTGATTTGAGTGCTAG+AGG | - | chr1_4:38223861-38223880 | Msa0162060:intron | 45.0% |
| GTCAGCTACAGCTTCTTCTT+TGG | - | chr1_4:38223898-38223917 | Msa0162060:intron | 45.0% | |
| ATCTCCAACAAGATGGAGCA+AGG | - | chr1_4:38223960-38223979 | Msa0162060:exon | 45.0% | |
| ! | AAATCAACTGTGTTGGTCCG+AGG | - | chr1_4:38224947-38224966 | Msa0162060:intron | 45.0% |
| ! | AATCAACTGTGTTGGTCCGA+GGG | - | chr1_4:38224948-38224967 | Msa0162060:intron | 45.0% |
| TTTCGGGAGAAAGTCTTGCA+TGG | - | chr1_4:38225034-38225053 | Msa0162060:CDS | 45.0% | |
| ! | AAAAATAGCGGGACAGGTAG+CGG | - | chr1_4:38226203-38226222 | Msa0162060:CDS | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr1_4:38226387-38226406 | Msa0162060:intron | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr1_4:38226388-38226407 | Msa0162060:intron | 45.0% |
| GGAAAGGAGGTTGGAAAAGA+AGG | - | chr1_4:38226409-38226428 | Msa0162060:intron | 45.0% | |
| GAAAAGAAGGAACGAGCAAG+TGG | - | chr1_4:38226422-38226441 | Msa0162060:intron | 45.0% | |
| CGAGCAAGTGGAAGAAATAG+AGG | - | chr1_4:38226434-38226453 | Msa0162060:intron | 45.0% | |
| GAAATAGAGGAAACTGGGAG+GGG | - | chr1_4:38226447-38226466 | Msa0162060:intron | 45.0% | |
| ACTAAACCCTCCTCATTTGG+GGG | - | chr1_4:38226502-38226521 | Msa0162060:intron | 45.0% | |
| TTAGTTCCCCCAAATGAGGA+GGG | + | chr1_4:38226511-38226530 | None:intergenic | 45.0% | |
| ! | TTTAGTTCCCCCAAATGAGG+AGG | + | chr1_4:38226512-38226531 | None:intergenic | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr1_4:38226388-38226407 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr1_4:38226387-38226406 | None:intergenic | 45.0% |
| TGGGCAAGTATGCATAACTC+TGG | + | chr1_4:38226883-38226902 | None:intergenic | 45.0% | |
| TAAAGAAGTCATGGTCCCCA+TGG | - | chr1_4:38227546-38227565 | Msa0162060:intron | 45.0% | |
| CCACCCATGAACATTAGAAC+TGG | + | chr1_4:38227589-38227608 | None:intergenic | 45.0% | |
| ! | CCAGTTCTAATGTTCATGGG+TGG | - | chr1_4:38227586-38227605 | Msa0162060:intron | 45.0% |
| GTTCTAATGTTCATGGGTGG+TGG | - | chr1_4:38227589-38227608 | Msa0162060:intron | 45.0% | |
| CTGCGAGAGTAGAATTAGGA+TGG | + | chr1_4:38227671-38227690 | None:intergenic | 45.0% | |
| CATCCTAATTCTACTCTCGC+AGG | - | chr1_4:38227669-38227688 | Msa0162060:intron | 45.0% | |
| ACGCACCTCAATTCGATTGT+TGG | - | chr1_4:38227767-38227786 | Msa0162060:intron | 45.0% | |
| CAAGACTCATGCATACAGGA+TGG | + | chr1_4:38227882-38227901 | None:intergenic | 45.0% | |
| TTGGTTAGGAGCAGCTTCAA+AGG | - | chr1_4:38228053-38228072 | Msa0162060:intron | 45.0% | |
| TTCAAAGGCTGTGGTTGTTG+AGG | - | chr1_4:38228068-38228087 | Msa0162060:intron | 45.0% | |
| ATGGTGACCCCTAGAGTTAA+GGG | + | chr1_4:38228130-38228149 | None:intergenic | 45.0% | |
| ! | CAGTTTGAAGCATGTCAGCA+TGG | + | chr1_4:38228149-38228168 | None:intergenic | 45.0% |
| TAGAGATGATGCAGCATCAG+TGG | + | chr1_4:38228276-38228295 | None:intergenic | 45.0% | |
| TGCTGCATCATCTCTACTAG+TGG | - | chr1_4:38228280-38228299 | Msa0162060:intron | 45.0% | |
| TGCATCATCTCTACTAGTGG+CGG | - | chr1_4:38228283-38228302 | Msa0162060:intron | 45.0% | |
| !! | TAGTGGCGGCTCTAAACAAA+GGG | - | chr1_4:38228297-38228316 | Msa0162060:intron | 45.0% |
| TCATGGACGGTACCTTATCA+TGG | - | chr1_4:38228330-38228349 | Msa0162060:intron | 45.0% | |
| CATGGACGGTACCTTATCAT+GGG | - | chr1_4:38228331-38228350 | Msa0162060:intron | 45.0% | |
| GCAATAGTCTGCTCCACAAA+AGG | + | chr1_4:38228359-38228378 | None:intergenic | 45.0% | |
| TGTGGAGCAGACTATTGCTA+TGG | - | chr1_4:38228361-38228380 | Msa0162060:intron | 45.0% | |
| CATAAGTACAGAATGGGGGT+AGG | - | chr1_4:38228401-38228420 | Msa0162060:intron | 45.0% | |
| GGATATAAAGTAGCTGCGGA+TGG | - | chr1_4:38228422-38228441 | Msa0162060:intron | 45.0% | |
| ! | CAGAATTGAGCTAGTTGGTG+TGG | - | chr1_4:38228541-38228560 | Msa0162060:intron | 45.0% |
| ! | CTAGTTGGTGTGGTTTGTGA+TGG | - | chr1_4:38228551-38228570 | Msa0162060:intron | 45.0% |
| GGAGAGCTATTATGACAGGA+AGG | - | chr1_4:38228702-38228721 | Msa0162060:intron | 45.0% | |
| !! | GCAAACTTGTTGACAGTGCT+AGG | - | chr1_4:38228789-38228808 | Msa0162060:intron | 45.0% |
| ACAGCTTATTGGATGGAAGG+AGG | - | chr1_4:38228956-38228975 | Msa0162060:CDS | 45.0% | |
| CAGCTTATTGGATGGAAGGA+GGG | - | chr1_4:38228957-38228976 | Msa0162060:CDS | 45.0% | |
| GGGTGATCACAATCTACTAG+AGG | - | chr1_4:38228977-38228996 | Msa0162060:CDS | 45.0% | |
| !! | CAATGGAACCTGGTTCTGTT+TGG | - | chr1_4:38229090-38229109 | Msa0162060:CDS | 45.0% |
| AAGTCCTTCCAAACAGAACC+AGG | + | chr1_4:38229101-38229120 | None:intergenic | 45.0% | |
| !!! | ATATTAACAAAATATTTTAA+CGG | - | chr1_4:38225508-38225527 | Msa0162060:intron | 5.0% |
| !!! | AATCATTTAATTTTTTTTTT+TGG | - | chr1_4:38225642-38225661 | Msa0162060:CDS | 5.0% |
| !!! | ATCATTTAATTTTTTTTTTT+GGG | - | chr1_4:38225643-38225662 | Msa0162060:CDS | 5.0% |
| !! | AAATAAATATTTAAAAAGTA+AGG | - | chr1_4:38225947-38225966 | Msa0162060:intron | 5.0% |
| !! | AAAAAATAAAAATGAATAAA+TGG | + | chr1_4:38227081-38227100 | None:intergenic | 5.0% |
| !!! | ACATTTATTTATTTTTAAAT+AGG | - | chr1_4:38227372-38227391 | Msa0162060:intron | 5.0% |
| !!! | AAACAATATTTTTTTTTTAT+GGG | + | chr1_4:38229304-38229323 | None:intergenic | 5.0% |
| !!! | TAAACAATATTTTTTTTTTA+TGG | + | chr1_4:38229305-38229324 | None:intergenic | 5.0% |
| TTACCGGAAGCAAGAGTCGA+CGG | - | chr1_4:38224152-38224171 | Msa0162060:CDS | 50.0% | |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr1_4:38226386-38226405 | Msa0162060:intron | 50.0% |
| TTTGCGAGTTTGGAGGGGAA+AGG | - | chr1_4:38226393-38226412 | Msa0162060:intron | 50.0% | |
| ! | TGCATTGGAGGAGGGTTTTG+AGG | - | chr1_4:38226536-38226555 | Msa0162060:intron | 50.0% |
| !! | GCATTGGAGGAGGGTTTTGA+GGG | - | chr1_4:38226537-38226556 | Msa0162060:intron | 50.0% |
| !!! | CATTGGAGGAGGGTTTTGAG+GGG | - | chr1_4:38226538-38226557 | Msa0162060:intron | 50.0% |
| !!! | AGGAGGGTTTTGAGGGGTTT+TGG | - | chr1_4:38226544-38226563 | Msa0162060:intron | 50.0% |
| !!! | AGGGTTTTGAGGGGTTTTGG+AGG | - | chr1_4:38226547-38226566 | Msa0162060:intron | 50.0% |
| !!! | GGGTTTTGAGGGGTTTTGGA+GGG | - | chr1_4:38226548-38226567 | Msa0162060:intron | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr1_4:38226386-38226405 | None:intergenic | 50.0% |
| GCTTGTGTGTTTGCGAGTGT+TGG | - | chr1_4:38226819-38226838 | Msa0162060:intron | 50.0% | |
| ! | GTGTTGGCAGCTAGGCAAAT+AGG | - | chr1_4:38226835-38226854 | Msa0162060:intron | 50.0% |
| AACTGGACTCCTCTCACTGA+GGG | + | chr1_4:38227572-38227591 | None:intergenic | 50.0% | |
| ! | AATGTTCATGGGTGGTGGCA+TGG | - | chr1_4:38227594-38227613 | Msa0162060:intron | 50.0% |
| ! | ATGTTCATGGGTGGTGGCAT+GGG | - | chr1_4:38227595-38227614 | Msa0162060:intron | 50.0% |
| CATGGTGACCCCTAGAGTTA+AGG | + | chr1_4:38228131-38228150 | None:intergenic | 50.0% | |
| !! | CTAGTGGCGGCTCTAAACAA+AGG | - | chr1_4:38228296-38228315 | Msa0162060:intron | 50.0% |
| CAAAGGGCGAGATGTGATCA+TGG | - | chr1_4:38228313-38228332 | Msa0162060:intron | 50.0% | |
| TTATGACAGGAAGGGCAGTG+AGG | - | chr1_4:38228711-38228730 | Msa0162060:intron | 50.0% | |
| TATGACAGGAAGGGCAGTGA+GGG | - | chr1_4:38228712-38228731 | Msa0162060:intron | 50.0% | |
| GGTCCACCGAAGGTAAAAAC+AGG | - | chr1_4:38228836-38228855 | Msa0162060:intron | 50.0% | |
| !!! | GCTCCTGTTTTTACCTTCGG+TGG | + | chr1_4:38228842-38228861 | None:intergenic | 50.0% |
| CAGAACCAGGTTCCATTGCT+GGG | + | chr1_4:38229088-38229107 | None:intergenic | 50.0% | |
| ACAGAACCAGGTTCCATTGC+TGG | + | chr1_4:38229089-38229108 | None:intergenic | 50.0% | |
| !! | GGAACCTGGTTCTGTTTGGA+AGG | - | chr1_4:38229094-38229113 | Msa0162060:intron | 50.0% |
| CAGAACATGTGTGAGGCGGA+CGG | + | chr1_4:38224088-38224107 | None:intergenic | 55.0% | |
| CAGCCAGAACATGTGTGAGG+CGG | + | chr1_4:38224092-38224111 | None:intergenic | 55.0% | |
| AGGCAGCCAGAACATGTGTG+AGG | + | chr1_4:38224095-38224114 | None:intergenic | 55.0% | |
| GGCAATCAAACCGGCAAAGG+AGG | + | chr1_4:38224115-38224134 | None:intergenic | 55.0% | |
| !! | CTTTGCCGGTTTGATTGCCG+CGG | - | chr1_4:38224116-38224135 | Msa0162060:CDS | 55.0% |
| TGGGGCGTGAGTTCAACTCT+CGG | - | chr1_4:38224600-38224619 | Msa0162060:CDS | 55.0% | |
| TTGGTCCGAGGGATTGCGTT+CGG | - | chr1_4:38224959-38224978 | Msa0162060:intron | 55.0% | |
| TTGACCCGAACGCAATCCCT+CGG | + | chr1_4:38224967-38224986 | None:intergenic | 55.0% | |
| GGATTGCGTTCGGGTCAAGT+TGG | - | chr1_4:38224969-38224988 | Msa0162060:intron | 55.0% | |
| GTTTGGAGGGGAAAGGAGGT+TGG | - | chr1_4:38226400-38226419 | Msa0162060:intron | 55.0% | |
| ATAGAGGAAACTGGGAGGGG+AGG | - | chr1_4:38226450-38226469 | Msa0162060:intron | 55.0% | |
| ! | AGGGGAAGGGAAGGCTTTGA+GGG | + | chr1_4:38226724-38226743 | None:intergenic | 55.0% |
| TTTGCGAGTTTGGAGGGGAG+GGG | + | chr1_4:38226742-38226761 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+GGG | + | chr1_4:38226392-38226411 | None:intergenic | 55.0% | |
| TGTTTGCGAGTTTGGAGGGG+AGG | + | chr1_4:38226391-38226410 | None:intergenic | 55.0% | |
| !! | GTTTGCGAGTGTTGGCAGCT+AGG | - | chr1_4:38226827-38226846 | Msa0162060:intron | 55.0% |
| GAACTGGACTCCTCTCACTG+AGG | + | chr1_4:38227573-38227592 | None:intergenic | 55.0% | |
| ATCCAACTATGAGGTGCGGC+TGG | - | chr1_4:38227816-38227835 | Msa0162060:intron | 55.0% | |
| AGGAGCAGCTTCAAAGGCTG+TGG | - | chr1_4:38228059-38228078 | Msa0162060:intron | 55.0% | |
| GGGCGAGATGTGATCATGGA+CGG | - | chr1_4:38228317-38228336 | Msa0162060:intron | 55.0% | |
| ! | TGCTATTGGTGGTCCACCGA+AGG | - | chr1_4:38228826-38228845 | Msa0162060:intron | 55.0% |
| CAAGGAACCTAGCCCAGCAA+TGG | - | chr1_4:38229073-38229092 | Msa0162060:CDS | 55.0% | |
| ! | GGTTCTGGCAGCAGCCATAT+TGG | + | chr1_4:38229209-38229228 | None:intergenic | 55.0% |
| CGTCCGCCTCACACATGTTC+TGG | - | chr1_4:38224086-38224105 | Msa0162060:CDS | 60.0% | |
| ! | GTTCTGGCTGCCTCCTTTGC+CGG | - | chr1_4:38224102-38224121 | Msa0162060:CDS | 60.0% |
| CGCGGCAATCAAACCGGCAA+AGG | + | chr1_4:38224118-38224137 | None:intergenic | 60.0% | |
| AGCAGCCGCGGCAATCAAAC+CGG | + | chr1_4:38224124-38224143 | None:intergenic | 60.0% | |
| CTCTTGCTTCCGGTAACGCG+AGG | + | chr1_4:38224148-38224167 | None:intergenic | 60.0% | |
| !! | CCACCGTCGACTCTTGCTTC+CGG | + | chr1_4:38224158-38224177 | None:intergenic | 60.0% |
| TGGTCCGAGGGATTGCGTTC+GGG | - | chr1_4:38224960-38224979 | Msa0162060:intron | 60.0% | |
| GCGAGTTTGGAGGGGAAAGG+AGG | - | chr1_4:38226396-38226415 | Msa0162060:intron | 60.0% | |
| AAACTGGGAGGGGAGGCCTT+TGG | - | chr1_4:38226457-38226476 | Msa0162060:intron | 60.0% | |
| AACTGGGAGGGGAGGCCTTT+GGG | - | chr1_4:38226458-38226477 | Msa0162060:intron | 60.0% | |
| !! | GAAGGGAAGGCTTTGAGGGG+TGG | + | chr1_4:38226720-38226739 | None:intergenic | 60.0% |
| !! | GGGGAAGGGAAGGCTTTGAG+GGG | + | chr1_4:38226723-38226742 | None:intergenic | 60.0% |
| GAGGGGAAGGGAAGGCTTTG+AGG | + | chr1_4:38226725-38226744 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAGGGGAA+GGG | + | chr1_4:38226737-38226756 | None:intergenic | 60.0% | |
| TCCTCTCACTGAGGGCCATG+GGG | + | chr1_4:38227564-38227583 | None:intergenic | 60.0% | |
| CTCCTCTCACTGAGGGCCAT+GGG | + | chr1_4:38227565-38227584 | None:intergenic | 60.0% | |
| ACTCCTCTCACTGAGGGCCA+TGG | + | chr1_4:38227566-38227585 | None:intergenic | 60.0% | |
| CTCCAGCCGCACCTCATAGT+TGG | + | chr1_4:38227821-38227840 | None:intergenic | 60.0% | |
| CCAGGTTCCATTGCTGGGCT+AGG | + | chr1_4:38229083-38229102 | None:intergenic | 60.0% | |
| CCTAGCCCAGCAATGGAACC+TGG | - | chr1_4:38229080-38229099 | Msa0162060:CDS | 60.0% | |
| CCGGAAGCAAGAGTCGACGG+TGG | - | chr1_4:38224155-38224174 | Msa0162060:CDS | 65.0% | |
| ACTGGGAGGGGAGGCCTTTG+GGG | - | chr1_4:38226459-38226478 | Msa0162060:intron | 65.0% | |
| TTGGAGGGGAGGGGAAGGGA+AGG | + | chr1_4:38226733-38226752 | None:intergenic | 65.0% | |
| CGAGTTTGGAGGGGAGGGGA+AGG | + | chr1_4:38226738-38226757 | None:intergenic | 65.0% | |
| TCCCCATGGCCCTCAGTGAG+AGG | - | chr1_4:38227560-38227579 | Msa0162060:intron | 65.0% | |
| ! | ATGGGTGGTGGCATGGGAGC+AGG | - | chr1_4:38227601-38227620 | Msa0162060:intron | 65.0% |
| GTAACGCGAGGCAGCAGCCG+CGG | + | chr1_4:38224136-38224155 | None:intergenic | 70.0% | |
| CGGCTGCTGCCTCGCGTTAC+CGG | - | chr1_4:38224136-38224155 | Msa0162060:CDS | 70.0% | |
| CTGGGAGGGGAGGCCTTTGG+GGG | - | chr1_4:38226460-38226479 | Msa0162060:intron | 70.0% | |
| TGGGAGGGGAGGCCTTTGGG+GGG | - | chr1_4:38226461-38226480 | Msa0162060:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 38223772 | 38229408 | 38223772 | ID=Msa0162060;Name=Msa0162060 |
| chr1_4 | mRNA | 38223772 | 38229408 | 38223772 | ID=Msa0162060-mRNA-1;Parent=Msa0162060;Name=Msa0162060-mRNA-1;_AED=0.11;_eAED=0.11;_QI=200|1|1|1|0.88|0.8|10|156|520 |
| chr1_4 | exon | 38223772 | 38223869 | 38223772 | ID=Msa0162060-mRNA-1:exon:11237;Parent=Msa0162060-mRNA-1 |
| chr1_4 | exon | 38223917 | 38224220 | 38223917 | ID=Msa0162060-mRNA-1:exon:11236;Parent=Msa0162060-mRNA-1 |
| chr1_4 | exon | 38224333 | 38224477 | 38224333 | ID=Msa0162060-mRNA-1:exon:11235;Parent=Msa0162060-mRNA-1 |
| chr1_4 | exon | 38224580 | 38224920 | 38224580 | ID=Msa0162060-mRNA-1:exon:11234;Parent=Msa0162060-mRNA-1 |
| chr1_4 | exon | 38225004 | 38225133 | 38225004 | ID=Msa0162060-mRNA-1:exon:11233;Parent=Msa0162060-mRNA-1 |
| chr1_4 | exon | 38225524 | 38225736 | 38225524 | ID=Msa0162060-mRNA-1:exon:11232;Parent=Msa0162060-mRNA-1 |
| chr1_4 | exon | 38225951 | 38226012 | 38225951 | ID=Msa0162060-mRNA-1:exon:11231;Parent=Msa0162060-mRNA-1 |
| chr1_4 | exon | 38226112 | 38226335 | 38226112 | ID=Msa0162060-mRNA-1:exon:11230;Parent=Msa0162060-mRNA-1 |
| chr1_4 | exon | 38228919 | 38229110 | 38228919 | ID=Msa0162060-mRNA-1:exon:11229;Parent=Msa0162060-mRNA-1 |
| chr1_4 | exon | 38229199 | 38229408 | 38229199 | ID=Msa0162060-mRNA-1:exon:11228;Parent=Msa0162060-mRNA-1 |
| chr1_4 | five_prime_UTR | 38229209 | 38229408 | 38229209 | ID=Msa0162060-mRNA-1:five_prime_utr;Parent=Msa0162060-mRNA-1 |
| chr1_4 | CDS | 38229199 | 38229208 | 38229199 | ID=Msa0162060-mRNA-1:cds;Parent=Msa0162060-mRNA-1 |
| chr1_4 | CDS | 38228919 | 38229110 | 38228919 | ID=Msa0162060-mRNA-1:cds;Parent=Msa0162060-mRNA-1 |
| chr1_4 | CDS | 38226112 | 38226335 | 38226112 | ID=Msa0162060-mRNA-1:cds;Parent=Msa0162060-mRNA-1 |
| chr1_4 | CDS | 38225951 | 38226012 | 38225951 | ID=Msa0162060-mRNA-1:cds;Parent=Msa0162060-mRNA-1 |
| chr1_4 | CDS | 38225524 | 38225736 | 38225524 | ID=Msa0162060-mRNA-1:cds;Parent=Msa0162060-mRNA-1 |
| chr1_4 | CDS | 38225004 | 38225133 | 38225004 | ID=Msa0162060-mRNA-1:cds;Parent=Msa0162060-mRNA-1 |
| chr1_4 | CDS | 38224580 | 38224920 | 38224580 | ID=Msa0162060-mRNA-1:cds;Parent=Msa0162060-mRNA-1 |
| chr1_4 | CDS | 38224333 | 38224477 | 38224333 | ID=Msa0162060-mRNA-1:cds;Parent=Msa0162060-mRNA-1 |
| chr1_4 | CDS | 38223975 | 38224220 | 38223975 | ID=Msa0162060-mRNA-1:cds;Parent=Msa0162060-mRNA-1 |
| chr1_4 | three_prime_UTR | 38223917 | 38223974 | 38223917 | ID=Msa0162060-mRNA-1:three_prime_utr;Parent=Msa0162060-mRNA-1 |
| chr1_4 | three_prime_UTR | 38223772 | 38223869 | 38223772 | ID=Msa0162060-mRNA-1:three_prime_utr;Parent=Msa0162060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
