AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0170900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0170900 MtrunA17_Chr1g0188711 98.795 249 2 1 1 249 1 248 0.0 499
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0170900 AT4G00026.1 70.874 206 58 2 40 244 65 269 4.75e-91 270

Find 99 sgRNAs with CRISPR-Local

Find 691 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTGACCATAACCTGTAAT+TGG 0.168759 1_4:+55357091 None:intergenic
TGTGAAGTACATTGAGTTTC+TGG 0.196319 1_4:-55348982 Msa0170900:three_prime_UTR
GAAGAAGGAGGAGGGAGAAT+TGG 0.220724 1_4:+55359625 None:intergenic
CAATGCAGGTCCTTGATATT+TGG 0.239521 1_4:-55349294 Msa0170900:intron
TCTCATCTAGACTACTTGTT+TGG 0.252981 1_4:+55350110 None:intergenic
AAGAAGGAGGAGGGAGAATT+GGG 0.255631 1_4:+55359626 None:intergenic
TACAGTCTGGTCATTCTTGC+AGG 0.260868 1_4:-55358269 Msa0170900:CDS
AAAACGGCGCCGGTTTCTTA+TGG 0.267817 1_4:+55359820 None:intergenic
TACAGGTTAATTTCTTTATC+CGG 0.292822 1_4:-55350274 Msa0170900:intron
CTGGTCATTCTTGCAGGGCT+TGG 0.297184 1_4:-55358263 Msa0170900:CDS
TATTAAACTCTTTACTCTTT+GGG 0.301931 1_4:+55358191 None:intergenic
CTTGGAGTTGCGGCTGCTGC+TGG 0.310884 1_4:-55358245 Msa0170900:CDS
CTCATCTAGACTACTTGTTT+GGG 0.313277 1_4:+55350111 None:intergenic
TTCTCCAGCACAACTAATTC+TGG 0.313380 1_4:-55350156 Msa0170900:CDS
CCTCCTCCTTCTTCCTTCCT+AGG 0.329285 1_4:-55359616 Msa0170900:intron
AAAGAATTCCCAACAGGGTT+TGG 0.335930 1_4:-55357045 Msa0170900:CDS
GCTGACAATTTCATATATCT+TGG 0.340052 1_4:-55349007 Msa0170900:three_prime_UTR
GCAGATGCGAGGAAAAGTTT+TGG 0.341847 1_4:-55349112 Msa0170900:three_prime_UTR
GGATCCCCAATTACAGGTTA+TGG 0.342971 1_4:-55357097 Msa0170900:CDS
CACAAATGTTACCGGCTTCT+CGG 0.372686 1_4:+55358304 None:intergenic
CGAGAAGCCGGTAACATTTG+TGG 0.402449 1_4:-55358303 Msa0170900:CDS
AGGATTGGATCCCCAATTAC+AGG 0.409135 1_4:-55357103 Msa0170900:CDS
GTTGGAATTGCAGAAAACTA+TGG 0.412465 1_4:-55359518 Msa0170900:CDS
CCTGACCATAACCTGTAATT+GGG 0.414561 1_4:+55357092 None:intergenic
AGGAGGGAGAATTGGGGCAT+TGG 0.416479 1_4:+55359633 None:intergenic
CTCGTCAAAGAATTCCCAAC+AGG 0.416592 1_4:-55357051 Msa0170900:CDS
GAATTTGAATCTCAATTCTC+AGG 0.419715 1_4:-55349172 Msa0170900:three_prime_UTR
TGCGAATGCGAAACATGGTT+TGG 0.421025 1_4:+55359737 None:intergenic
TGATGAAGAAAGTGCATTGC+GGG 0.422235 1_4:+55359681 None:intergenic
CCTCCTGTCGAACAAGGAAC+TGG 0.424858 1_4:+55349241 None:intergenic
TCATCGGTCCAAACCCTGTT+GGG 0.437968 1_4:+55357037 None:intergenic
ACAGGTTAATTTCTTTATCC+GGG 0.440134 1_4:-55350273 Msa0170900:intron
CTTCCAGTTCCTTGTTCGAC+AGG 0.440654 1_4:-55349244 Msa0170900:three_prime_UTR
TTCCAGGTCAGAGGGAGGAT+TGG 0.449707 1_4:-55357118 Msa0170900:intron
GACTCCAGAATTAGTTGTGC+TGG 0.450239 1_4:+55350152 None:intergenic
TACTTGTTTGGGTTGTAAGA+AGG 0.465698 1_4:+55350122 None:intergenic
GATATTTGGTCCATTACTGT+AGG 0.468005 1_4:-55349280 Msa0170900:three_prime_UTR
ACAAATGTTACCGGCTTCTC+GGG 0.475865 1_4:+55358305 None:intergenic
AAGAATTCAAGATGATGGTC+AGG 0.477460 1_4:-55357887 Msa0170900:intron
CCCAATTACAGGTTATGGTC+AGG 0.479884 1_4:-55357092 Msa0170900:CDS
CTCATCGGTCCAAACCCTGT+TGG 0.484272 1_4:+55357036 None:intergenic
CTCAAAAGAATTCAAGATGA+TGG 0.488801 1_4:-55357892 Msa0170900:CDS
ACTTGTTTGGGTTGTAAGAA+GGG 0.491275 1_4:+55350123 None:intergenic
AGAAGGAGGAGGGAGAATTG+GGG 0.502304 1_4:+55359627 None:intergenic
AAAGGATAACCATAAGAAAC+CGG 0.509469 1_4:-55359829 Msa0170900:five_prime_UTR
CCAGTTCCTTGTTCGACAGG+AGG 0.511242 1_4:-55349241 Msa0170900:three_prime_UTR
GCCGGTAACATTTGTGGAGG+GGG 0.515141 1_4:-55358297 Msa0170900:CDS
AGACATAAACCTTGTCAAAG+AGG 0.517648 1_4:+55359490 None:intergenic
ATATAATATTCCCGAGAAGC+CGG 0.533779 1_4:-55358315 Msa0170900:CDS
TCTTGCAGGGCTTGGAGTTG+CGG 0.534096 1_4:-55358255 Msa0170900:CDS
ACAGTCTGGTCATTCTTGCA+GGG 0.534491 1_4:-55358268 Msa0170900:CDS
GCAAACACTTCACTTCAAAA+CGG 0.534538 1_4:+55359804 None:intergenic
AGAATTGCAGCCTACAGTAA+TGG 0.539766 1_4:+55349270 None:intergenic
AGAAAGTGCATTGCGGGTGC+AGG 0.546641 1_4:+55359687 None:intergenic
TCAAAGGAGCTGACGGTGAG+TGG 0.548735 1_4:-55350214 Msa0170900:CDS
TTCTCGGGAATATTATATGT+TGG 0.548981 1_4:+55358320 None:intergenic
TATTGGATTTCCAGGTCAGA+GGG 0.556067 1_4:-55357126 Msa0170900:intron
CTTTCACCTCCTGTCGAACA+AGG 0.558425 1_4:+55349235 None:intergenic
CCTAGGAAGGAAGAAGGAGG+AGG 0.559147 1_4:+55359616 None:intergenic
AAGGATTTAGAAGCAAGTAA+AGG 0.559872 1_4:-55359847 None:intergenic
TCAAATGCATCGTCTGAGCA+AGG 0.560458 1_4:-55359467 Msa0170900:CDS
AGAATTAGTTGTGCTGGAGA+AGG 0.564476 1_4:+55350158 None:intergenic
AGGAGGTGAAAGTTGAAAGA+AGG 0.567784 1_4:-55349224 Msa0170900:three_prime_UTR
ACAAGTAGTCTAGATGAGAA+AGG 0.572207 1_4:-55350106 Msa0170900:intron
CAGGGTTTGGACCGATGAGG+AGG 0.578696 1_4:-55357032 Msa0170900:CDS
CAGTAATGGACCAAATATCA+AGG 0.579927 1_4:+55349284 None:intergenic
CAAATGCATCGTCTGAGCAA+GGG 0.589240 1_4:-55359466 Msa0170900:CDS
GATTCTGCGAATGCGAAACA+TGG 0.589397 1_4:+55359732 None:intergenic
GTATTGGATTTCCAGGTCAG+AGG 0.591215 1_4:-55357127 Msa0170900:intron
ATGTTCAACACCCTCCTCAT+CGG 0.592436 1_4:+55357021 None:intergenic
AGCCGGTAACATTTGTGGAG+GGG 0.592583 1_4:-55358298 Msa0170900:CDS
CAGGTTAATTTCTTTATCCG+GGG 0.595507 1_4:-55350272 Msa0170900:CDS
GGCGAAGTGAAGACTGAAGA+GGG 0.606726 1_4:+55359774 None:intergenic
AACAAACCTAGGAAGGAAGA+AGG 0.611477 1_4:+55359610 None:intergenic
AAGCCGGTAACATTTGTGGA+GGG 0.611693 1_4:-55358299 Msa0170900:CDS
ACTTCACTTCAAAACGGCGC+CGG 0.611997 1_4:+55359810 None:intergenic
TATGTTGGAGCATCATCGAA+TGG 0.615482 1_4:+55358335 None:intergenic
AAGTACATTGAGTTTCTGGA+AGG 0.616481 1_4:-55348978 Msa0170900:three_prime_UTR
GGGTGCAGGATGCGAGTGCA+CGG 0.625367 1_4:+55359701 None:intergenic
AGAATTGGGGCATTGGAACG+AGG 0.625833 1_4:+55359640 None:intergenic
ATTAAGAACCTGCAGATGCG+AGG 0.625890 1_4:-55349123 Msa0170900:three_prime_UTR
GTATTCGCTGAGATGTTCAA+AGG 0.627485 1_4:-55350230 Msa0170900:CDS
CTAGGAAGGAAGAAGGAGGA+GGG 0.628489 1_4:+55359617 None:intergenic
CGGCGAAGTGAAGACTGAAG+AGG 0.630777 1_4:+55359773 None:intergenic
CTGACCATAACCTGTAATTG+GGG 0.635184 1_4:+55357093 None:intergenic
GAGATGTTCAAAGGAGCTGA+CGG 0.637033 1_4:-55350221 Msa0170900:CDS
ATGGATCAACCTCTTTGACA+AGG 0.641918 1_4:-55359499 Msa0170900:CDS
GAAGCCGGTAACATTTGTGG+AGG 0.643600 1_4:-55358300 Msa0170900:CDS
TGGATTTCCAGGTCAGAGGG+AGG 0.644772 1_4:-55357123 Msa0170900:intron
TAACAATAAATTAGAATACA+CGG 0.653144 1_4:+55349032 None:intergenic
AGGGTTTGGACCGATGAGGA+GGG 0.654864 1_4:-55357031 Msa0170900:CDS
CAACAGGGTTTGGACCGATG+AGG 0.658274 1_4:-55357035 Msa0170900:CDS
GGAGGGTGTTGAACATGTCG+AGG 0.659911 1_4:-55357014 Msa0170900:intron
TCGTCAAAGAATTCCCAACA+GGG 0.663020 1_4:-55357050 Msa0170900:CDS
AAACCTAGGAAGGAAGAAGG+AGG 0.666916 1_4:+55359613 None:intergenic
TAGGTACAAGATTTATAACA+AGG 0.670702 1_4:-55357917 Msa0170900:CDS
TGCAAGAATGACCAGACTGT+AGG 0.695526 1_4:+55358271 None:intergenic
ATGATGAAGAAAGTGCATTG+CGG 0.712599 1_4:+55359680 None:intergenic
TTGGAACGAGGAAGAGAACG+TGG 0.726769 1_4:+55359652 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - chr1_4:55354370-55354389 Msa0170900:intron 0.0%
!! ATATATATATATATATATAT+AGG + chr1_4:55354370-55354389 Msa0170910:intron 0.0%
!!! ATTTTTATGTTTTTTTTTCT+AGG - chr1_4:55349190-55349209 Msa0170900:three_prime_UTR 10.0%
!!! TCATTTATTGATTTTAATTA+AGG - chr1_4:55349363-55349382 Msa0170900:intron 10.0%
!!! CTTTTTTATTGTAAATTAAT+TGG - chr1_4:55355486-55355505 Msa0170900:intron 10.0%
!! ACTCATTTATTAATAAATTA+TGG + chr1_4:55356309-55356328 None:intergenic 10.0%
!!! AAATTGTTATTAATACATAT+AGG + chr1_4:55356342-55356361 None:intergenic 10.0%
!!! TTTTTTTTTTTTAAGGATTA+TGG + chr1_4:55357579-55357598 None:intergenic 10.0%
!!! AAATTTTTAAATCTTCTTTA+TGG - chr1_4:55358364-55358383 Msa0170900:CDS 10.0%
!! CATTATTAAAAAAATTCATT+TGG + chr1_4:55359824-55359843 None:intergenic 10.0%
!! TTAATTAAGGAATAATGTTT+AGG - chr1_4:55349376-55349395 Msa0170900:intron 15.0%
!!! TTTTTTTGCTTAAATAATGA+AGG - chr1_4:55349784-55349803 Msa0170900:intron 15.0%
!! TATTATCAAAATTCAAACAT+AGG + chr1_4:55351114-55351133 None:intergenic 15.0%
!!! ATGTTTGAATTTTGATAATA+AGG - chr1_4:55351114-55351133 Msa0170900:intron 15.0%
!!! TATATTATCATTTTTCATTG+AGG + chr1_4:55351181-55351200 None:intergenic 15.0%
!! ATATATAATATAAAATCACC+AGG - chr1_4:55351196-55351215 Msa0170900:intron 15.0%
!!! TTACAAATCATTGTTTTATT+TGG + chr1_4:55351517-55351536 None:intergenic 15.0%
!!! GTAAATTGTATGTTAATTTT+TGG - chr1_4:55351533-55351552 Msa0170900:intron 15.0%
!! AATAACAATAAGAAAAACAT+TGG - chr1_4:55352686-55352705 Msa0170900:intron 15.0%
!! TTGAAATCATAAGAAATTAT+AGG - chr1_4:55353187-55353206 Msa0170900:intron 15.0%
!!! TTAAATTGTAACTTTTAATC+TGG + chr1_4:55354521-55354540 Msa0170910:intron 15.0%
!!! TTTTTTTTTTTGAAGAAAAG+AGG + chr1_4:55355449-55355468 Msa0170910:three_prime_UTR 15.0%
!! TGTAATTGAATTTGTAAAAA+AGG + chr1_4:55355693-55355712 None:intergenic 15.0%
!!! TGAATTAATTTGATTTTTCT+TGG - chr1_4:55355806-55355825 Msa0170900:intron 15.0%
!!! TTGGTTTTTTTGAATTAATT+TGG - chr1_4:55355825-55355844 Msa0170900:intron 15.0%
!! AAATACATATGTAATTCAAA+CGG - chr1_4:55356793-55356812 Msa0170900:intron 15.0%
!! AGAAAATATAAAATGAAAAG+TGG - chr1_4:55358034-55358053 Msa0170900:intron 15.0%
!!! ATGAAATGATATAGTATTTT+AGG - chr1_4:55358899-55358918 Msa0170900:intron 15.0%
!! ATTGCATGTTTATAAATATT+GGG - chr1_4:55359083-55359102 Msa0170900:intron 15.0%
!! TAAACTTGAAGAATAAATTA+TGG - chr1_4:55359226-55359245 Msa0170900:intron 15.0%
!! TTATTTATAAGAATATGAAC+TGG + chr1_4:55359399-55359418 None:intergenic 15.0%
!! TAACAATAAATTAGAATACA+CGG + chr1_4:55359703-55359722 None:intergenic 15.0%
!! AATGAGTAATGCATATATTA+GGG + chr1_4:55349348-55349367 None:intergenic 20.0%
!! AAATGAGTAATGCATATATT+AGG + chr1_4:55349349-55349368 None:intergenic 20.0%
!! AACTTCATTAAAAATTATGG+TGG + chr1_4:55349545-55349564 None:intergenic 20.0%
!!! ACCATAATTTTTAATGAAGT+TGG - chr1_4:55349544-55349563 Msa0170900:intron 20.0%
!! ACCAACTTCATTAAAAATTA+TGG + chr1_4:55349548-55349567 None:intergenic 20.0%
!!! GAGTAGTTTTTTTTTTTAGA+GGG - chr1_4:55349813-55349832 Msa0170900:intron 20.0%
!!! CATATTTTCTAGTATTGATT+GGG + chr1_4:55350226-55350245 None:intergenic 20.0%
!!! TCATATTTTCTAGTATTGAT+TGG + chr1_4:55350227-55350246 None:intergenic 20.0%
!! AAAAGAGTTAAAAAATGTTG+AGG - chr1_4:55350372-55350391 Msa0170900:intron 20.0%
!! TATTAAACTCTTTACTCTTT+GGG + chr1_4:55350544-55350563 None:intergenic 20.0%
!! ATATTAAACTCTTTACTCTT+TGG + chr1_4:55350545-55350564 None:intergenic 20.0%
!! AACAATCAGAACAAAATAAA+TGG + chr1_4:55350783-55350802 None:intergenic 20.0%
!!! AATATTTAAGTTCCTCTAAA+TGG + chr1_4:55350929-55350948 None:intergenic 20.0%
!! TATACAAAGACAACTAAAAT+TGG - chr1_4:55351040-55351059 Msa0170900:intron 20.0%
!! ATACAAAGACAACTAAAATT+GGG - chr1_4:55351041-55351060 Msa0170900:intron 20.0%
!!! AATTTTTTGGTAGAACAAAA+AGG + chr1_4:55351479-55351498 None:intergenic 20.0%
!!! TACAATCTTTAAAGAATGTT+GGG + chr1_4:55352318-55352337 None:intergenic 20.0%
!! TTTAACAAAATTATTGCTTC+TGG + chr1_4:55352622-55352641 None:intergenic 20.0%
!!! TATATGACTTTTATAACTTG+CGG + chr1_4:55352824-55352843 None:intergenic 20.0%
!!! TACGATTTTTATAACTATAG+CGG + chr1_4:55352871-55352890 None:intergenic 20.0%
!!! GCTTTTGAACTATTTTTTAA+CGG - chr1_4:55352899-55352918 Msa0170900:intron 20.0%
!!! ATTGATTTGATTTTTGCATA+AGG - chr1_4:55353025-55353044 Msa0170900:intron 20.0%
!! CTAAAAACTTTCTCATAAAA+TGG + chr1_4:55353065-55353084 None:intergenic 20.0%
!!! TTTACTTTCGTAGATATTTT+TGG + chr1_4:55353331-55353350 None:intergenic 20.0%
!!! AATGTTTTTTCTGTGTTTTT+AGG + chr1_4:55353398-55353417 Msa0170910:intron 20.0%
!! ATTTGATACAATTCTTTCTT+TGG - chr1_4:55353804-55353823 Msa0170900:intron 20.0%
!! TAATTATATAAGAGAGAATG+AGG + chr1_4:55354335-55354354 Msa0170910:intron 20.0%
!!! TATATTTTTGATCTAATGGT+CGG + chr1_4:55354494-55354513 Msa0170910:intron 20.0%
!! ACCATTAGATCAAAAATATA+TGG - chr1_4:55354494-55354513 Msa0170900:intron 20.0%
!!! ACCATATATTTTTGATCTAA+TGG + chr1_4:55354498-55354517 Msa0170910:intron 20.0%
!!! TTTTTATTGCTGAATGTATA+CGG - chr1_4:55354817-55354836 Msa0170900:intron 20.0%
!! TTAATTTCAAAATTGAGATC+TGG + chr1_4:55354866-55354885 Msa0170910:intron 20.0%
!! ACCATTAGATCAAAAATAAA+TGG - chr1_4:55355262-55355281 Msa0170900:intron 20.0%
!!! ACCATTTATTTTTGATCTAA+TGG + chr1_4:55355266-55355285 Msa0170910:three_prime_UTR 20.0%
!!! AAAAGGTTTGATTTTTACAA+TGG + chr1_4:55355676-55355695 None:intergenic 20.0%
!! ACCAAAATGTTTAAGAAAAT+TGG - chr1_4:55355765-55355784 Msa0170900:intron 20.0%
!! CCAAAATGTTTAAGAAAATT+GGG - chr1_4:55355766-55355785 Msa0170900:intron 20.0%
!! CAAAATCAATTTCATAAACT+GGG + chr1_4:55355936-55355955 None:intergenic 20.0%
!! TCAAAATCAATTTCATAAAC+TGG + chr1_4:55355937-55355956 None:intergenic 20.0%
!! ATGACTAATTTATATGAGAA+TGG + chr1_4:55356143-55356162 None:intergenic 20.0%
!! TATTAATAAATTATGGCTAC+TGG + chr1_4:55356302-55356321 None:intergenic 20.0%
!! TATTAATAAATGAGTCACAT+TGG - chr1_4:55356314-55356333 Msa0170900:intron 20.0%
!! AACATAATCAACACTTTAAT+CGG - chr1_4:55356639-55356658 Msa0170900:intron 20.0%
!! GCAAATACATATAATTAGAT+TGG + chr1_4:55356990-55357009 None:intergenic 20.0%
!!! ATTATTTTCACATAATGCAA+TGG + chr1_4:55357116-55357135 None:intergenic 20.0%
!!! TGAATTTTCGTTTTTTTCTA+TGG + chr1_4:55357349-55357368 None:intergenic 20.0%
!!! TTGAGATTTTATTTTTCATC+AGG + chr1_4:55357509-55357528 None:intergenic 20.0%
!! TAATCAAATTACAACTTAGT+AGG - chr1_4:55357643-55357662 Msa0170900:intron 20.0%
!! AACTAGCATTAATTGAAAAA+CGG + chr1_4:55358121-55358140 None:intergenic 20.0%
!! TCAATTAATGCTAGTTAAAT+AGG - chr1_4:55358125-55358144 Msa0170900:intron 20.0%
!!! ACTTACTTTAAAAGCTAATT+AGG + chr1_4:55358310-55358329 None:intergenic 20.0%
!!! GTATGATTTGTATTATTTCT+CGG - chr1_4:55358335-55358354 Msa0170900:CDS 20.0%
!!! TTTTTAAATCTTCTTTATGG+TGG - chr1_4:55358367-55358386 Msa0170900:CDS 20.0%
!!! TTTTAAATCTTCTTTATGGT+GGG - chr1_4:55358368-55358387 Msa0170900:CDS 20.0%
!! CTTGTTTCATCAAAATAAAT+GGG + chr1_4:55358666-55358685 None:intergenic 20.0%
!! ACTTGTTTCATCAAAATAAA+TGG + chr1_4:55358667-55358686 None:intergenic 20.0%
!!! ATGAAACAAGTTTTTTTGAA+GGG - chr1_4:55358676-55358695 Msa0170900:intron 20.0%
!! CATTGCATGTTTATAAATAT+TGG - chr1_4:55359082-55359101 Msa0170900:intron 20.0%
!! TGTTTATAAATATTGGGTAT+CGG - chr1_4:55359089-55359108 Msa0170900:intron 20.0%
!!! AACAGTTAAACACAATTTTT+CGG + chr1_4:55359184-55359203 None:intergenic 20.0%
! TAAAGTGAAGTGAAATTGAA+GGG + chr1_4:55349154-55349173 None:intergenic 25.0%
! ATAAAGTGAAGTGAAATTGA+AGG + chr1_4:55349155-55349174 None:intergenic 25.0%
!!! ATGTTTTTTTTTCTAGGTGT+TGG - chr1_4:55349196-55349215 Msa0170900:three_prime_UTR 25.0%
!! AAGGAATAATGTTTAGGTTT+AGG - chr1_4:55349382-55349401 Msa0170900:intron 25.0%
!!! TGTGGAATTTTAAAGTTGTT+AGG - chr1_4:55349506-55349525 Msa0170900:intron 25.0%
! AAAACACTCTAATTACCAAT+TGG - chr1_4:55349598-55349617 Msa0170900:intron 25.0%
! TAAACACTCTAATTACCAAT+TGG - chr1_4:55349651-55349670 Msa0170900:intron 25.0%
! AAACACTCTAATTACCAATT+GGG - chr1_4:55349599-55349618 Msa0170900:intron 25.0%
!!! GGAGTAGTTTTTTTTTTTAG+AGG - chr1_4:55349812-55349831 Msa0170900:intron 25.0%
! TCATATGAAGTTATCACATA+TGG - chr1_4:55349963-55349982 Msa0170900:intron 25.0%
! AGTAAAGAGTTTAATATCCT+TGG - chr1_4:55350548-55350567 Msa0170900:intron 25.0%
! TCAGATAAATAATATGACCA+AGG + chr1_4:55350568-55350587 None:intergenic 25.0%
!!! CTTATTGATTGTTGAGTTTT+GGG - chr1_4:55350636-55350655 Msa0170900:intron 25.0%
! TAGGTACAAGATTTATAACA+AGG - chr1_4:55350815-55350834 Msa0170900:intron 25.0%
!!! TTATTTTGGTTTTCTGATTC+AGG + chr1_4:55350899-55350918 None:intergenic 25.0%
!!! TAAATGGAGATGCTTTATTT+TGG + chr1_4:55350913-55350932 None:intergenic 25.0%
!! TGCAGAAACATACATATTTT+AGG - chr1_4:55351771-55351790 Msa0170900:intron 25.0%
! AGATAACTATGAAAAAGGAA+AGG - chr1_4:55351856-55351875 Msa0170900:intron 25.0%
!!! TTATTTGTGTATGTTTTAGC+TGG + chr1_4:55351963-55351982 None:intergenic 25.0%
! CATAGTACGTTTATATGAAT+AGG - chr1_4:55351994-55352013 Msa0170900:intron 25.0%
! ATGAATAGGTCAAATAGTTA+CGG - chr1_4:55352008-55352027 Msa0170900:intron 25.0%
!!! TTCACATTTTAATAACCATG+AGG + chr1_4:55352047-55352066 None:intergenic 25.0%
!! GTACAATCTTTAAAGAATGT+TGG + chr1_4:55352319-55352338 None:intergenic 25.0%
! AGACTAATAATAACCATGAT+GGG + chr1_4:55352508-55352527 None:intergenic 25.0%
! AAGACTAATAATAACCATGA+TGG + chr1_4:55352509-55352528 None:intergenic 25.0%
! GTTAAAAGCAAAGTAAGTAA+AGG + chr1_4:55352955-55352974 None:intergenic 25.0%
! AAGTGCAAAAATCAAATCAA+TGG + chr1_4:55353003-55353022 None:intergenic 25.0%
! ATAACCATATGAGAGATAAA+TGG - chr1_4:55353092-55353111 Msa0170900:intron 25.0%
! AAAACCATTTATCTCTCATA+TGG + chr1_4:55353099-55353118 None:intergenic 25.0%
!! ATATGAGAGATAAATGGTTT+TGG - chr1_4:55353098-55353117 Msa0170900:intron 25.0%
! AACAATATATTCGAAACTAC+AGG - chr1_4:55353270-55353289 Msa0170900:intron 25.0%
!!! TAATTTTGATTGAAATGTGC+AGG + chr1_4:55353606-55353625 Msa0170910:intron 25.0%
!! TAAGCTTAATTTAAGATAGC+AGG - chr1_4:55353977-55353996 Msa0170900:intron 25.0%
!! TGTGTAGTTTTTAATGTCAA+AGG + chr1_4:55354197-55354216 Msa0170910:intron 25.0%
! AAACATCACTTATACTTCTT+TGG - chr1_4:55354234-55354253 Msa0170900:intron 25.0%
! AACACAAAATGAGCATTATA+AGG - chr1_4:55354261-55354280 Msa0170900:intron 25.0%
! TCATCATTCTCATATAAGAT+AGG + chr1_4:55354462-55354481 Msa0170910:intron 25.0%
!! AAAATCAATTTTTCCGAACA+AGG + chr1_4:55354607-55354626 Msa0170910:intron 25.0%
! ATCTACAAAGCTTATAAATC+AGG - chr1_4:55354664-55354683 Msa0170900:intron 25.0%
!! GAGATCTGGAATTATAAAAT+TGG + chr1_4:55354852-55354871 Msa0170910:intron 25.0%
!!! AACCATTTATTTTGATCTGA+TGG - chr1_4:55355136-55355155 Msa0170900:intron 25.0%
! ATGACTATCTTATATGAGAA+TGG - chr1_4:55355224-55355243 Msa0170900:intron 25.0%
! ACTTGAATCTCACTAATTAA+TGG + chr1_4:55355403-55355422 Msa0170910:three_prime_UTR 25.0%
! ACAAGAATCCATTGAAAATT+AGG + chr1_4:55355589-55355608 None:intergenic 25.0%
! AAAACCCAGAAAAGAAATTA+TGG + chr1_4:55355627-55355646 None:intergenic 25.0%
!! ATTCAATTACAACTCTTTTC+TGG - chr1_4:55355702-55355721 Msa0170900:intron 25.0%
!! TTCAATTACAACTCTTTTCT+GGG - chr1_4:55355703-55355722 Msa0170900:intron 25.0%
!! CCCAATTTTCTTAAACATTT+TGG + chr1_4:55355769-55355788 None:intergenic 25.0%
!!! TTCATAAACTGGGTTATTTT+GGG + chr1_4:55355926-55355945 None:intergenic 25.0%
!! TTTCATAAACTGGGTTATTT+TGG + chr1_4:55355927-55355946 None:intergenic 25.0%
!!! TTGATTTTGATCCAATTATG+AGG - chr1_4:55355947-55355966 Msa0170900:intron 25.0%
!!! TGATTTTGATCCAATTATGA+GGG - chr1_4:55355948-55355967 Msa0170900:intron 25.0%
! TCTTGAAAACTGATAGAATA+AGG - chr1_4:55356038-55356057 Msa0170900:intron 25.0%
!! TTAATCTCAATCATCCATTT+TGG - chr1_4:55356092-55356111 Msa0170900:intron 25.0%
! ATTAACCATTAGATCCAAAA+TGG + chr1_4:55356109-55356128 None:intergenic 25.0%
!!! ATTTTGAGTTTGTTGAGTTT+AGG + chr1_4:55356265-55356284 None:intergenic 25.0%
!! ACAACAATGATTTTGAATAG+AGG - chr1_4:55356415-55356434 Msa0170900:intron 25.0%
!!! ACTTTCCGTTATTTATTTTC+CGG + chr1_4:55356517-55356536 None:intergenic 25.0%
!!! TTTTTTCTCTACTTTCCATT+AGG + chr1_4:55356563-55356582 None:intergenic 25.0%
!!! GATTAAAGTGTTGATTATGT+TGG + chr1_4:55356640-55356659 None:intergenic 25.0%
!!! ATGTGTCGTTCATTTTTATT+TGG + chr1_4:55356712-55356731 None:intergenic 25.0%
!!! TTTTATTTGTGTTCGTGATT+TGG + chr1_4:55356743-55356762 None:intergenic 25.0%
!!! TGTTTTTGTGTTCTGTTTTT+GGG + chr1_4:55356944-55356963 None:intergenic 25.0%
!!! TTGTTTTTGTGTTCTGTTTT+TGG + chr1_4:55356945-55356964 None:intergenic 25.0%
! ACTATGATTTCTAAATGACT+TGG + chr1_4:55357012-55357031 None:intergenic 25.0%
! ACATCAGAATATGCATTATT+GGG + chr1_4:55357077-55357096 None:intergenic 25.0%
! AACATCAGAATATGCATTAT+TGG + chr1_4:55357078-55357097 None:intergenic 25.0%
! CAATGCAAAAAAAAGTAACA+TGG - chr1_4:55357367-55357386 Msa0170900:intron 25.0%
!! ATTTTTCATCAGGAAGAATA+AGG + chr1_4:55357499-55357518 None:intergenic 25.0%
! ATCTCAATCAAACTTAAACA+CGG - chr1_4:55357522-55357541 Msa0170900:intron 25.0%
! CTTTGTTGAATATTTGTATC+AGG - chr1_4:55357791-55357810 Msa0170900:intron 25.0%
!! TGGATGAAAAGTTTAATTTC+AGG - chr1_4:55357854-55357873 Msa0170900:intron 25.0%
! AATTTCTCCTCTTGTTAAAT+CGG - chr1_4:55357893-55357912 Msa0170900:CDS 25.0%
! GTTCTTTATAAGAGAAAGAA+TGG - chr1_4:55357944-55357963 Msa0170900:intron 25.0%
! TATAGTTCCAGTGTAAAATA+GGG + chr1_4:55358157-55358176 None:intergenic 25.0%
! TTATAGTTCCAGTGTAAAAT+AGG + chr1_4:55358158-55358177 None:intergenic 25.0%
! CTAACATGCATCATTTAATT+CGG + chr1_4:55358215-55358234 None:intergenic 25.0%
! TACAGGTTAATTTCTTTATC+CGG - chr1_4:55358458-55358477 Msa0170900:intron 25.0%
!!! GATGAAACAAGTTTTTTTGA+AGG - chr1_4:55358675-55358694 Msa0170900:intron 25.0%
! ATGTGGAACATAAGATAATT+TGG + chr1_4:55358839-55358858 None:intergenic 25.0%
! GTTCCACATATTTAATTAAG+TGG - chr1_4:55358850-55358869 Msa0170900:intron 25.0%
! TCACCACTTAATTAAATATG+TGG + chr1_4:55358856-55358875 None:intergenic 25.0%
! GAAAAATTGTGTTTAACTGT+TGG - chr1_4:55359183-55359202 Msa0170900:intron 25.0%
! GGAGAACGAAATATTAAAAA+AGG - chr1_4:55359247-55359266 Msa0170900:intron 25.0%
AAAGGATAACCATAAGAAAC+CGG - chr1_4:55348903-55348922 Msa0170900:three_prime_UTR 30.0%
AACACTCTAATTACCAATTG+GGG - chr1_4:55349600-55349619 Msa0170900:intron 30.0%
CATGTATGTATGTGTGTAAT+AGG - chr1_4:55349702-55349721 Msa0170900:intron 30.0%
ACTTAGCACGAATTATAGTT+CGG + chr1_4:55349751-55349770 None:intergenic 30.0%
TTTGCTTAAATAATGAAGGC+CGG - chr1_4:55349788-55349807 Msa0170900:intron 30.0%
AAAAAAAAAAACTACTCCCC+CGG + chr1_4:55349810-55349829 None:intergenic 30.0%
ATGTAGAAATGTTAGTAGCA+AGG - chr1_4:55349915-55349934 Msa0170900:intron 30.0%
ATTTGCATCCAAGTCATAAA+TGG + chr1_4:55350006-55350025 None:intergenic 30.0%
TCACAATGAAATTCACGTAT+AGG + chr1_4:55350050-55350069 None:intergenic 30.0%
! GTTTTACACGGCATTTTATT+TGG - chr1_4:55350284-55350303 Msa0170900:intron 30.0%
TTCTCGGGAATATTATATGT+TGG + chr1_4:55350415-55350434 None:intergenic 30.0%
TCTGAAAGAAAAATGCTACA+TGG - chr1_4:55350583-55350602 Msa0170900:intron 30.0%
AACTCAACAATCAATAAGCA+TGG + chr1_4:55350634-55350653 None:intergenic 30.0%
!! GCTTATTGATTGTTGAGTTT+TGG - chr1_4:55350635-55350654 Msa0170900:intron 30.0%
GATTGTTATAAGCTGATGAT+AGG - chr1_4:55350796-55350815 Msa0170900:intron 30.0%
CTCAAAAGAATTCAAGATGA+TGG - chr1_4:55350840-55350859 Msa0170900:intron 30.0%
! AATAAAGCATCTCCATTTAG+AGG - chr1_4:55350914-55350933 Msa0170900:intron 30.0%
GTATATCTTCTTCCTACAAA+TGG + chr1_4:55351025-55351044 None:intergenic 30.0%
ACTAAAATTGGGTGATGAAA+TGG - chr1_4:55351052-55351071 Msa0170900:intron 30.0%
!!! TGCTACTTTTACACTGATAA+CGG + chr1_4:55351154-55351173 None:intergenic 30.0%
TTTACTACTACTGGATCAAA+AGG + chr1_4:55351229-55351248 None:intergenic 30.0%
! AAGTGATCTTTTACTACTAC+TGG + chr1_4:55351238-55351257 None:intergenic 30.0%
TTGTTCAGGGTAAAAAACTT+CGG + chr1_4:55351430-55351449 None:intergenic 30.0%
CCTCTTTCATTTATTGTTCA+GGG + chr1_4:55351443-55351462 None:intergenic 30.0%
TCCTCTTTCATTTATTGTTC+AGG + chr1_4:55351444-55351463 None:intergenic 30.0%
!!! CATTGTTTTATTTGGTGCTT+TGG + chr1_4:55351509-55351528 None:intergenic 30.0%
TGTCTTGATGTGAAATGTAT+TGG - chr1_4:55351589-55351608 Msa0170900:intron 30.0%
AATAGTCATTGCGAATGAAA+CGG - chr1_4:55352351-55352370 Msa0170900:intron 30.0%
GTCATATCTGGAAGTAATAT+AGG + chr1_4:55352463-55352482 None:intergenic 30.0%
AGGAATATAGATCAAAGATC+AGG + chr1_4:55352547-55352566 None:intergenic 30.0%
ATATTCCTTAACAACATCAC+CGG - chr1_4:55352559-55352578 Msa0170900:intron 30.0%
AAATCACTAACTCGGATTAA+AGG + chr1_4:55352593-55352612 None:intergenic 30.0%
TTTAATCCGAGTTAGTGATT+TGG - chr1_4:55352592-55352611 Msa0170900:intron 30.0%
TTAATCCGAGTTAGTGATTT+GGG - chr1_4:55352593-55352612 Msa0170900:intron 30.0%
!! TTTTATAACTTGCGGAAAGA+CGG + chr1_4:55352816-55352835 None:intergenic 30.0%
AGTAAAGGAGTCTAAATACA+TGG + chr1_4:55352940-55352959 None:intergenic 30.0%
TGATGCATTGCTTTGATTAT+TGG + chr1_4:55353251-55353270 None:intergenic 30.0%
TATATTCGAAACTACAGGAA+AGG - chr1_4:55353275-55353294 Msa0170900:intron 30.0%
! TTTAAAGTGTCTCATCTGTT+TGG + chr1_4:55353462-55353481 Msa0170910:intron 30.0%
!! CTTTAAAGCCTCATAAAATC+AGG - chr1_4:55353475-55353494 Msa0170900:intron 30.0%
TGCAAGATAGAATCACATTA+CGG - chr1_4:55353555-55353574 Msa0170900:intron 30.0%
GATACAATTCTTTCTTTGGT+TGG - chr1_4:55353808-55353827 Msa0170900:intron 30.0%
!! GGCTATATTTTTATGTTCCA+GGG + chr1_4:55353865-55353884 Msa0170910:intron 30.0%
!! AGGCTATATTTTTATGTTCC+AGG + chr1_4:55353866-55353885 Msa0170910:intron 30.0%
GAAACTTAATTCAAGATAGC+AGG - chr1_4:55353929-55353948 Msa0170900:intron 30.0%
TGTGATGAAGTTAATCAAAG+AGG - chr1_4:55354072-55354091 Msa0170900:intron 30.0%
AGAATGAGGATGTAAAGATA+CGG + chr1_4:55354321-55354340 Msa0170910:intron 30.0%
GACAAGAATTCTTACGATAT+TGG + chr1_4:55354630-55354649 Msa0170910:intron 30.0%
!!! CAAAGCATGTTTTGATTGTT+TGG - chr1_4:55354964-55354983 Msa0170900:intron 30.0%
AGCCATCAGATCAAAATAAA+TGG + chr1_4:55355141-55355160 Msa0170910:three_prime_UTR 30.0%
GATATTGCATCAATTCAACT+AGG + chr1_4:55355541-55355560 None:intergenic 30.0%
! AGGATCCATAATTTCTTTTC+TGG - chr1_4:55355619-55355638 Msa0170900:intron 30.0%
! GGATCCATAATTTCTTTTCT+GGG - chr1_4:55355620-55355639 Msa0170900:intron 30.0%
AACCATGAACGAAAAGATAA+AGG - chr1_4:55355741-55355760 Msa0170900:intron 30.0%
! TTCCTTTATCTTTTCGTTCA+TGG + chr1_4:55355746-55355765 None:intergenic 30.0%
TAAGAAAATTGGGAATGAAG+AGG - chr1_4:55355776-55355795 Msa0170900:intron 30.0%
TGAAAACTGATAGAATAAGG+AGG - chr1_4:55356041-55356060 Msa0170900:intron 30.0%
GAAAACTGATAGAATAAGGA+GGG - chr1_4:55356042-55356061 Msa0170900:intron 30.0%
AAAACTGATAGAATAAGGAG+GGG - chr1_4:55356043-55356062 Msa0170900:intron 30.0%
! ATCATCCATTTTGGATCTAA+TGG - chr1_4:55356101-55356120 Msa0170900:intron 30.0%
TTATATGAGAATGGTGAGAA+TGG + chr1_4:55355233-55355252 Msa0170910:three_prime_UTR 30.0%
TAACATGAATCTTATGTCTC+TGG + chr1_4:55356461-55356480 None:intergenic 30.0%
CTTAACAACAACAACGTATT+TGG - chr1_4:55356481-55356500 Msa0170900:intron 30.0%
ATGACATAAAAACCCCAATT+CGG - chr1_4:55356915-55356934 Msa0170900:intron 30.0%
AAATCATAGTTACCTGAGTA+AGG - chr1_4:55357022-55357041 Msa0170900:CDS 30.0%
CCTCTCAACATATATATCTT+TGG + chr1_4:55357244-55357263 None:intergenic 30.0%
CCAAAGATATATATGTTGAG+AGG - chr1_4:55357241-55357260 Msa0170900:intron 30.0%
CAGACAGAACAAAAAAACAA+TGG - chr1_4:55357302-55357321 Msa0170900:intron 30.0%
! GTCATCATCAATTGTTTTCA+AGG + chr1_4:55357447-55357466 None:intergenic 30.0%
AAGAGAATCTCAAAAACGAA+AGG - chr1_4:55357709-55357728 Msa0170900:intron 30.0%
GTTGAATATTTGTATCAGGA+TGG - chr1_4:55357795-55357814 Msa0170900:intron 30.0%
AAGAATGGAAGATGATATCT+TGG - chr1_4:55357959-55357978 Msa0170900:intron 30.0%
ATGATATCTTGGTTGAAAGT+AGG - chr1_4:55357970-55357989 Msa0170900:intron 30.0%
TATGAAATGGAGAGAACAAA+AGG - chr1_4:55358008-55358027 Msa0170900:intron 30.0%
ATAAAATGAAAAGTGGAGAC+TGG - chr1_4:55358041-55358060 Msa0170900:intron 30.0%
GGAAATTAGCATAGCAATTA+GGG - chr1_4:55358268-55358287 Msa0170900:CDS 30.0%
TGCTCTCAAATATGTTCATT+TGG - chr1_4:55358433-55358452 Msa0170900:intron 30.0%
GCTCTCAAATATGTTCATTT+GGG - chr1_4:55358434-55358453 Msa0170900:intron 30.0%
! AATATGTTCATTTGGGTTAC+AGG - chr1_4:55358441-55358460 Msa0170900:intron 30.0%
ACAGGTTAATTTCTTTATCC+GGG - chr1_4:55358459-55358478 Msa0170900:intron 30.0%
!! CATCAAAATAAATGGGCTAT+TGG + chr1_4:55358659-55358678 None:intergenic 30.0%
AGGGATTAAGTGAGATATTT+GGG + chr1_4:55358957-55358976 None:intergenic 30.0%
AAGGGATTAAGTGAGATATT+TGG + chr1_4:55358958-55358977 None:intergenic 30.0%
TAATCCCTTGCTTACATTAA+AGG - chr1_4:55358969-55358988 Msa0170900:intron 30.0%
AATCCCTTGCTTACATTAAA+GGG - chr1_4:55358970-55358989 Msa0170900:intron 30.0%
TAAACATGCAATGTAAGCAA+GGG + chr1_4:55359075-55359094 None:intergenic 30.0%
ATAAACATGCAATGTAAGCA+AGG + chr1_4:55359076-55359095 None:intergenic 30.0%
! GTCCATTTTATCTTGCATTT+TGG - chr1_4:55359117-55359136 Msa0170900:intron 30.0%
!!! GTTTCTGCGTATCAATTTTT+TGG - chr1_4:55359325-55359344 Msa0170900:intron 30.0%
TGGACCAAACTAAAAGAAAT+GGG + chr1_4:55359358-55359377 None:intergenic 30.0%
GAATTTGAATCTCAATTCTC+AGG - chr1_4:55359560-55359579 Msa0170900:intron 30.0%
GCTGACAATTTCATATATCT+TGG - chr1_4:55359725-55359744 Msa0170900:CDS 30.0%
!!! AAGGAGTATGCTATTTTGTT+AGG - chr1_4:55359773-55359792 Msa0170900:five_prime_UTR 30.0%
!!! AGGAGTATGCTATTTTGTTA+GGG - chr1_4:55359774-55359793 Msa0170900:five_prime_UTR 30.0%
GCAAACACTTCACTTCAAAA+CGG + chr1_4:55348931-55348950 None:intergenic 35.0%
!!! GGTTTGGTTTTGATTCTATG+CGG + chr1_4:55348982-55349001 None:intergenic 35.0%
! ATGATGAAGAAAGTGCATTG+CGG + chr1_4:55349055-55349074 None:intergenic 35.0%
! GAAGTGAAATTGAAGGGTTT+TGG + chr1_4:55349148-55349167 None:intergenic 35.0%
GTTGGAATTGCAGAAAACTA+TGG - chr1_4:55349214-55349233 Msa0170900:three_prime_UTR 35.0%
AGACATAAACCTTGTCAAAG+AGG + chr1_4:55349245-55349264 None:intergenic 35.0%
AAACAGTATTAGCGTGAAAG+TGG + chr1_4:55349310-55349329 None:intergenic 35.0%
CTAAGTGTGTTTGACACAAA+TGG - chr1_4:55349444-55349463 Msa0170900:intron 35.0%
TTGCTTAAATAATGAAGGCC+GGG - chr1_4:55349789-55349808 Msa0170900:intron 35.0%
ATGAGTTAGCAAGATGTCTA+TGG + chr1_4:55349947-55349966 None:intergenic 35.0%
CAAATCGAAAATTTCCCACT+TGG - chr1_4:55350021-55350040 Msa0170900:intron 35.0%
! TCTATTCTCTACCCATGTTT+TGG - chr1_4:55350146-55350165 Msa0170900:CDS 35.0%
CCAAAAACACTATTGTAGCA+TGG + chr1_4:55350179-55350198 None:intergenic 35.0%
! CCATGCTACAATAGTGTTTT+TGG - chr1_4:55350176-55350195 Msa0170900:CDS 35.0%
! TTGGCGTTGTCATTTCTTAA+AGG - chr1_4:55350195-55350214 Msa0170900:CDS 35.0%
TGTAAAACACAGCCATTCTA+TGG + chr1_4:55350272-55350291 None:intergenic 35.0%
! TAGAATGGCTGTGTTTTACA+CGG - chr1_4:55350272-55350291 Msa0170900:CDS 35.0%
ATATAATATTCCCGAGAAGC+CGG - chr1_4:55350417-55350436 Msa0170900:intron 35.0%
! TGCTGGATATTCTGTTTTCA+AGG - chr1_4:55350504-55350523 Msa0170900:intron 35.0%
!!! ATTGATTGTTGAGTTTTGGG+TGG - chr1_4:55350639-55350658 Msa0170900:intron 35.0%
! AAGAATTCAAGATGATGGTC+AGG - chr1_4:55350845-55350864 Msa0170900:intron 35.0%
CAACACAAACTGAAGGATAT+TGG + chr1_4:55350965-55350984 None:intergenic 35.0%
CAATATCCTTCAGTTTGTGT+TGG - chr1_4:55350963-55350982 Msa0170900:intron 35.0%
GTTGGATATGAAATGAAGCT+GGG - chr1_4:55350985-55351004 Msa0170900:intron 35.0%
! TAGGTGCTATGTCATTGAAT+AGG - chr1_4:55351279-55351298 Msa0170900:intron 35.0%
TATGTCATTGAATAGGTGGT+TGG - chr1_4:55351286-55351305 Msa0170900:intron 35.0%
TTGAAAGGATCTTTAACGAC+TGG + chr1_4:55351326-55351345 None:intergenic 35.0%
CTAGCTTACTGCATATTGAA+AGG + chr1_4:55351341-55351360 None:intergenic 35.0%
CTTTCAATATGCAGTAAGCT+AGG - chr1_4:55351339-55351358 Msa0170900:intron 35.0%
ATATGCAGTAAGCTAGGTAT+AGG - chr1_4:55351345-55351364 Msa0170900:intron 35.0%
TATGTCATTGAGTAGGTGAT+TGG - chr1_4:55351371-55351390 Msa0170900:intron 35.0%
CCCTGAACAATAAATGAAAG+AGG - chr1_4:55351440-55351459 Msa0170900:intron 35.0%
GTGAAATGTATTGGATTTCC+AGG - chr1_4:55351598-55351617 Msa0170900:intron 35.0%
GTTTAGAAGACCTTTCAGAA+AGG - chr1_4:55351826-55351845 Msa0170900:intron 35.0%
GGAGGAGATAACTATGAAAA+AGG - chr1_4:55351851-55351870 Msa0170900:intron 35.0%
GCGATAAACTAAACACATGA+TGG - chr1_4:55352070-55352089 Msa0170900:intron 35.0%
TGAGAGTTACTTCCAGAAAT+GGG + chr1_4:55352243-55352262 None:intergenic 35.0%
TTGAGAGTTACTTCCAGAAA+TGG + chr1_4:55352244-55352263 None:intergenic 35.0%
TGTCTCCGTTGAAATTTGAA+AGG - chr1_4:55352385-55352404 Msa0170900:intron 35.0%
GGACTCCTTTCAAATTTCAA+CGG + chr1_4:55352393-55352412 None:intergenic 35.0%
CTTGAAGGAAATGTCATATC+TGG + chr1_4:55352475-55352494 None:intergenic 35.0%
ACTAACTCGGATTAAAGGTT+GGG + chr1_4:55352588-55352607 None:intergenic 35.0%
AGCCTTAGAAACTACAGTAA+AGG - chr1_4:55353350-55353369 Msa0170900:intron 35.0%
TGCCTTTACTGTAGTTTCTA+AGG + chr1_4:55353355-55353374 None:intergenic 35.0%
! TAACAGTCTAAAACAATCCC+AGG - chr1_4:55353422-55353441 Msa0170900:intron 35.0%
!! CATCTGTTTGGTCTTATCTT+TGG + chr1_4:55353450-55353469 Msa0170910:intron 35.0%
! GGAAAAAGCCTGATTTTATG+AGG + chr1_4:55353486-55353505 Msa0170910:intron 35.0%
! TTTCTTTGGTTGGTCCATAA+GGG - chr1_4:55353818-55353837 Msa0170900:intron 35.0%
TTATGTTCCAGGGATATGTT+GGG + chr1_4:55353855-55353874 Msa0170910:intron 35.0%
TTTATGTTCCAGGGATATGT+TGG + chr1_4:55353856-55353875 Msa0170910:intron 35.0%
TGACCTTCAAGCAAAGTAAT+GGG + chr1_4:55354018-55354037 Msa0170910:intron 35.0%
CAAGCTATACTAAGAGTAAG+AGG - chr1_4:55354109-55354128 Msa0170900:intron 35.0%
! AATTTTTCCGAACAAGGTGA+GGG + chr1_4:55354601-55354620 Msa0170910:intron 35.0%
!!! GCATGTTTTGATTGTTTGGA+CGG - chr1_4:55354968-55354987 Msa0170900:intron 35.0%
ATGAGAAGTTGAATAGCATG+TGG - chr1_4:55355074-55355093 Msa0170900:intron 35.0%
!! ACAGATGAAAGCATTGTTGT+TGG + chr1_4:55355362-55355381 Msa0170910:three_prime_UTR 35.0%
! ATTAATGGTGATGAAGCGAT+GGG + chr1_4:55355388-55355407 Msa0170910:three_prime_UTR 35.0%
! AATTAATGGTGATGAAGCGA+TGG + chr1_4:55355389-55355408 Msa0170910:three_prime_UTR 35.0%
! GGCATAGTCCTAATTTTCAA+TGG - chr1_4:55355578-55355597 Msa0170900:intron 35.0%
!!! GGATTCTTGTTTTTTCTCGT+AGG - chr1_4:55355599-55355618 Msa0170900:intron 35.0%
ATAGAGGAATACATAGTCAC+TGG - chr1_4:55356431-55356450 Msa0170900:intron 35.0%
CGTCACCGGAAAATAAATAA+CGG - chr1_4:55356509-55356528 Msa0170900:intron 35.0%
CGTTGTCGAAAAATACCTAA+TGG - chr1_4:55356545-55356564 Msa0170900:intron 35.0%
TTGTTGGGATTTAGATTGAG+AGG + chr1_4:55356607-55356626 None:intergenic 35.0%
!!! GTTGGAGTGTTTTGATTGTT+GGG + chr1_4:55356622-55356641 None:intergenic 35.0%
!!! TGTTGGAGTGTTTTGATTGT+TGG + chr1_4:55356623-55356642 None:intergenic 35.0%
!! GTTTTCAAGGTTTGAGACAA+GGG + chr1_4:55357434-55357453 None:intergenic 35.0%
!! TGTTTTCAAGGTTTGAGACA+AGG + chr1_4:55357435-55357454 None:intergenic 35.0%
!! TTGATGATGACTCATAATCC+TGG - chr1_4:55357456-55357475 Msa0170900:intron 35.0%
!!! AAAAACTGGGGGAGTTTTTT+TGG + chr1_4:55357759-55357778 None:intergenic 35.0%
TGTCCAACATTCAAAAACTG+GGG + chr1_4:55357771-55357790 None:intergenic 35.0%
GTGTCCAACATTCAAAAACT+GGG + chr1_4:55357772-55357791 None:intergenic 35.0%
AGTGTCCAACATTCAAAAAC+TGG + chr1_4:55357773-55357792 None:intergenic 35.0%
TATTTGTATCAGGATGGTGT+TGG - chr1_4:55357801-55357820 Msa0170900:intron 35.0%
GGATGAACTGATGAACAAAT+TGG - chr1_4:55357834-55357853 Msa0170900:intron 35.0%
TTAACAAGAGGAGAAATTGC+TGG + chr1_4:55357891-55357910 None:intergenic 35.0%
ATATCTTGGTTGAAAGTAGG+AGG - chr1_4:55357973-55357992 Msa0170900:intron 35.0%
TATCTTGGTTGAAAGTAGGA+GGG - chr1_4:55357974-55357993 Msa0170900:intron 35.0%
TTACACTGGAACTATAACCT+AGG - chr1_4:55358161-55358180 Msa0170900:intron 35.0%
!! GTTAGCTTGTTGTGTAAGAT+TGG - chr1_4:55358230-55358249 Msa0170900:CDS 35.0%
TAATTTCCCTCCTAATCACA+TGG + chr1_4:55358256-55358275 None:intergenic 35.0%
GGGAAATTAGCATAGCAATT+AGG - chr1_4:55358267-55358286 Msa0170900:CDS 35.0%
CAGGTTAATTTCTTTATCCG+GGG - chr1_4:55358460-55358479 Msa0170900:intron 35.0%
! AATACTTTTCCATGTCCATG+GGG + chr1_4:55358487-55358506 None:intergenic 35.0%
! GAATACTTTTCCATGTCCAT+GGG + chr1_4:55358488-55358507 None:intergenic 35.0%
!! ACTTGTTTGGGTTGTAAGAA+GGG + chr1_4:55358612-55358631 None:intergenic 35.0%
!! TACTTGTTTGGGTTGTAAGA+AGG + chr1_4:55358613-55358632 None:intergenic 35.0%
CTCATCTAGACTACTTGTTT+GGG + chr1_4:55358624-55358643 None:intergenic 35.0%
TCTCATCTAGACTACTTGTT+TGG + chr1_4:55358625-55358644 None:intergenic 35.0%
ACAAGTAGTCTAGATGAGAA+AGG - chr1_4:55358626-55358645 Msa0170900:intron 35.0%
GGGATTAAGTGAGATATTTG+GGG + chr1_4:55358956-55358975 None:intergenic 35.0%
TTGCCCTTTAATGTAAGCAA+GGG + chr1_4:55358976-55358995 None:intergenic 35.0%
GGCCAAAATGCAAGATAAAA+TGG + chr1_4:55359122-55359141 None:intergenic 35.0%
GACATGAACAAGATGATACT+CGG + chr1_4:55359143-55359162 None:intergenic 35.0%
!! TTTTCGGACTAGATTATGCA+AGG + chr1_4:55359168-55359187 None:intergenic 35.0%
!! CTCTCCCATTTCTTTTAGTT+TGG - chr1_4:55359351-55359370 Msa0170900:intron 35.0%
CTGGACCAAACTAAAAGAAA+TGG + chr1_4:55359359-55359378 None:intergenic 35.0%
CTAATCTCATTACTCAATGC+AGG - chr1_4:55359424-55359443 Msa0170900:intron 35.0%
!! CAGTAATGGACCAAATATCA+AGG + chr1_4:55359451-55359470 None:intergenic 35.0%
GATATTTGGTCCATTACTGT+AGG - chr1_4:55359452-55359471 Msa0170900:CDS 35.0%
TGTGAAGTACATTGAGTTTC+TGG - chr1_4:55359750-55359769 Msa0170900:exon 35.0%
! AAGTACATTGAGTTTCTGGA+AGG - chr1_4:55359754-55359773 Msa0170900:five_prime_UTR 35.0%
!!! GGAGTATGCTATTTTGTTAG+GGG - chr1_4:55359775-55359794 Msa0170900:five_prime_UTR 35.0%
! TGATGAAGAAAGTGCATTGC+GGG + chr1_4:55349054-55349073 None:intergenic 40.0%
AACAAACCTAGGAAGGAAGA+AGG + chr1_4:55349125-55349144 None:intergenic 40.0%
!!! GTTTTGGAACAAACCTAGGA+AGG + chr1_4:55349132-55349151 None:intergenic 40.0%
!!! AAGGGTTTTGGAACAAACCT+AGG + chr1_4:55349136-55349155 None:intergenic 40.0%
ATGGATCAACCTCTTTGACA+AGG - chr1_4:55349233-55349252 Msa0170900:three_prime_UTR 40.0%
GCAAGGGAAAAACACTGAAA+AGG - chr1_4:55349282-55349301 Msa0170900:three_prime_UTR 40.0%
TGCTTAAATAATGAAGGCCG+GGG - chr1_4:55349790-55349809 Msa0170900:intron 40.0%
AAACCTTATCCCACTAAGTG+GGG + chr1_4:55349868-55349887 None:intergenic 40.0%
CAAACCTTATCCCACTAAGT+GGG + chr1_4:55349869-55349888 None:intergenic 40.0%
TCATAAATGGCGTAAGCGTA+AGG + chr1_4:55349993-55350012 None:intergenic 40.0%
TCACGTATAGGTTACCAAGT+GGG + chr1_4:55350038-55350057 None:intergenic 40.0%
TTCACGTATAGGTTACCAAG+TGG + chr1_4:55350039-55350058 None:intergenic 40.0%
! TATGTTGGAGCATCATCGAA+TGG + chr1_4:55350400-55350419 None:intergenic 40.0%
!!! AGTTTTGGGTGGATCCTTAT+TGG - chr1_4:55350650-55350669 Msa0170900:intron 40.0%
ATCAGAATTGAGCTAGACTC+TGG + chr1_4:55350698-55350717 None:intergenic 40.0%
! ATCCTTCAGTTTGTGTTGGT+TGG - chr1_4:55350967-55350986 Msa0170900:intron 40.0%
ATCCAACCAACACAAACTGA+AGG + chr1_4:55350972-55350991 None:intergenic 40.0%
GGTTGGATATGAAATGAAGC+TGG - chr1_4:55350984-55351003 Msa0170900:intron 40.0%
TTCTGCAGATCACCATTTGT+AGG - chr1_4:55351010-55351029 Msa0170900:intron 40.0%
GGATCAAAAGGAAGAAATCC+TGG + chr1_4:55351217-55351236 None:intergenic 40.0%
ACTTCAATATGCAGTCAGCT+CGG - chr1_4:55351254-55351273 Msa0170900:intron 40.0%
GTGCTATGTCATTGAATAGG+TGG - chr1_4:55351282-55351301 Msa0170900:intron 40.0%
ATTGAATAGGTGGTTGGAGT+TGG - chr1_4:55351292-55351311 Msa0170900:intron 40.0%
TTGAATAGGTGGTTGGAGTT+GGG - chr1_4:55351293-55351312 Msa0170900:intron 40.0%
TAGGCGTTATGTCATTGAGT+AGG - chr1_4:55351364-55351383 Msa0170900:intron 40.0%
ATTGAGTAGGTGATTGGAGT+TGG - chr1_4:55351377-55351396 Msa0170900:intron 40.0%
TTGAGTAGGTGATTGGAGTT+GGG - chr1_4:55351378-55351397 Msa0170900:intron 40.0%
!!! CTTTGGTGCGTGCAATTTTT+TGG + chr1_4:55351492-55351511 None:intergenic 40.0%
TATTGGATTTCCAGGTCAGA+GGG - chr1_4:55351606-55351625 Msa0170900:intron 40.0%
CTGACCATAACCTGTAATTG+GGG + chr1_4:55351642-55351661 None:intergenic 40.0%
CCTGACCATAACCTGTAATT+GGG + chr1_4:55351643-55351662 None:intergenic 40.0%
TCCTGACCATAACCTGTAAT+TGG + chr1_4:55351644-55351663 None:intergenic 40.0%
TCGTCAAAGAATTCCCAACA+GGG - chr1_4:55351682-55351701 Msa0170900:intron 40.0%
AAAGAATTCCCAACAGGGTT+TGG - chr1_4:55351687-55351706 Msa0170900:intron 40.0%
TGAAAGGTCTTCTAAACCCA+GGG + chr1_4:55351823-55351842 None:intergenic 40.0%
TAGAAGACCTTTCAGAAAGG+AGG - chr1_4:55351829-55351848 Msa0170900:intron 40.0%
AGAAGACCTTTCAGAAAGGA+GGG - chr1_4:55351830-55351849 Msa0170900:intron 40.0%
TGGTTCTTGGAGAGCTTAAT+TGG - chr1_4:55351891-55351910 Msa0170900:intron 40.0%
GGTTTAAAGAATGCACCTCA+TGG - chr1_4:55352029-55352048 Msa0170900:intron 40.0%
TACGACATCAAAAGTCACGT+CGG - chr1_4:55352199-55352218 Msa0170900:intron 40.0%
!! TTCCAGAAATGGGTTGAAGA+TGG + chr1_4:55352233-55352252 None:intergenic 40.0%
AGCTGACTGTGTGAAAACAT+AGG - chr1_4:55352277-55352296 Msa0170900:intron 40.0%
CTGTGTGAAAACATAGGACT+TGG - chr1_4:55352283-55352302 Msa0170900:intron 40.0%
ATTGCGAATGAAACGGCTAT+CGG - chr1_4:55352358-55352377 Msa0170900:intron 40.0%
! GAAGGTGCAAGGAATAATCT+TGG - chr1_4:55352421-55352440 Msa0170900:intron 40.0%
ATGGGTGAATTTGTGCTTGA+AGG + chr1_4:55352490-55352509 None:intergenic 40.0%
AAGCACAAATTCACCCATCA+TGG - chr1_4:55352492-55352511 Msa0170900:intron 40.0%
CAAAGATCAGGCTTATGCAA+TGG + chr1_4:55352535-55352554 None:intergenic 40.0%
CTAACTCGGATTAAAGGTTG+GGG + chr1_4:55352587-55352606 None:intergenic 40.0%
CACTAACTCGGATTAAAGGT+TGG + chr1_4:55352589-55352608 None:intergenic 40.0%
GGTATCCCAAATCACTAACT+CGG + chr1_4:55352601-55352620 None:intergenic 40.0%
AGGAAAGGCTTACAATGTAC+AGG - chr1_4:55353290-55353309 Msa0170900:intron 40.0%
! TTAGGTGTTGTGTGGAGTTA+TGG + chr1_4:55353380-55353399 Msa0170910:CDS 40.0%
!!! CTGTGTTTTTAGGTGTTGTG+TGG + chr1_4:55353388-55353407 Msa0170910:CDS 40.0%
!! TGGTCTTATCTTTGGTTCCT+GGG + chr1_4:55353442-55353461 Msa0170910:intron 40.0%
!! TTGGTCTTATCTTTGGTTCC+TGG + chr1_4:55353443-55353462 Msa0170910:intron 40.0%
ATTGAAATGTGCAGGTGTGT+TGG + chr1_4:55353598-55353617 Msa0170910:intron 40.0%
AGATAACTGACCAAGCTTGT+CGG - chr1_4:55353771-55353790 Msa0170900:intron 40.0%
! CTTTCTTTGGTTGGTCCATA+AGG - chr1_4:55353817-55353836 Msa0170900:intron 40.0%
TATGTTCCAGGGATATGTTG+GGG + chr1_4:55353854-55353873 Msa0170910:intron 40.0%
TAAGATAGCAGGACAATGTC+TGG - chr1_4:55353988-55354007 Msa0170900:intron 40.0%
AGTCCCATTACTTTGCTTGA+AGG - chr1_4:55354012-55354031 Msa0170900:intron 40.0%
CTGACCTTCAAGCAAAGTAA+TGG + chr1_4:55354019-55354038 Msa0170910:intron 40.0%
GGTTCACAATTGATTGAGTG+TGG + chr1_4:55354561-55354580 Msa0170910:intron 40.0%
AGGGAAGAAGAGAAGATGAA+AGG + chr1_4:55354582-55354601 Msa0170910:intron 40.0%
! CAATTTTTCCGAACAAGGTG+AGG + chr1_4:55354602-55354621 Msa0170910:intron 40.0%
TCCTTTCATGTGACAGTGAA+AGG - chr1_4:55354910-55354929 Msa0170900:intron 40.0%
TCCTTTCACTGTCACATGAA+AGG + chr1_4:55354914-55354933 Msa0170910:CDS 40.0%
GAAAGAAATACCAGACACCA+AGG - chr1_4:55355032-55355051 Msa0170900:intron 40.0%
! AGCATTGTTGTTGGAGAAGA+TGG + chr1_4:55355353-55355372 Msa0170910:three_prime_UTR 40.0%
GCAATATCAACATGTTCCTC+TGG - chr1_4:55355553-55355572 Msa0170900:intron 40.0%
TATCAACATGTTCCTCTGGA+CGG - chr1_4:55355557-55355576 Msa0170900:intron 40.0%
TGATCCAATTATGAGGGAGA+AGG - chr1_4:55355954-55355973 Msa0170900:intron 40.0%
GATCCAATTATGAGGGAGAA+GGG - chr1_4:55355955-55355974 Msa0170900:intron 40.0%
TATCCCTTCTCCCTCATAAT+TGG + chr1_4:55355961-55355980 None:intergenic 40.0%
! ATGGAAGGTGTGTTGTTGAA+TGG - chr1_4:55356013-55356032 Msa0170900:intron 40.0%
! TGGAAGGTGTGTTGTTGAAT+GGG - chr1_4:55356014-55356033 Msa0170900:intron 40.0%
AAAGTTGACGTTCGCATAGA+TGG - chr1_4:55356580-55356599 Msa0170900:intron 40.0%
AAGTTGACGTTCGCATAGAT+GGG - chr1_4:55356581-55356600 Msa0170900:intron 40.0%
!!! TGTTTTTGGGTAGCCGAATT+GGG + chr1_4:55356931-55356950 None:intergenic 40.0%
!! CATCTAGAAGCATTGTGTCA+AGG - chr1_4:55357216-55357235 Msa0170900:intron 40.0%
!! TGTTCTGTCTGTAGCTTTAG+TGG + chr1_4:55357293-55357312 None:intergenic 40.0%
! AAGGTTTGAGACAAGGGAAT+CGG + chr1_4:55357428-55357447 None:intergenic 40.0%
GCTTTCACATTCATGATTCC+AGG + chr1_4:55357477-55357496 None:intergenic 40.0%
GTAGGATGACAGTACTACAA+AGG - chr1_4:55357661-55357680 Msa0170900:intron 40.0%
CTACAAAGGAGAAAGCAAAC+AGG - chr1_4:55357675-55357694 Msa0170900:intron 40.0%
GTCCAACATTCAAAAACTGG+GGG + chr1_4:55357770-55357789 None:intergenic 40.0%
TTCTCCTCTTGTTAAATCGG+TGG - chr1_4:55357896-55357915 Msa0170900:CDS 40.0%
!! ACAACCACCGATTTAACAAG+AGG + chr1_4:55357903-55357922 None:intergenic 40.0%
CTTGTTAAATCGGTGGTTGT+TGG - chr1_4:55357903-55357922 Msa0170900:CDS 40.0%
TGGTTGTTGGAGTTGAACTA+AGG - chr1_4:55357916-55357935 Msa0170900:CDS 40.0%
GGTTGTTGGAGTTGAACTAA+GGG - chr1_4:55357917-55357936 Msa0170900:CDS 40.0%
TTGGAGTTGAACTAAGGGTT+TGG - chr1_4:55357922-55357941 Msa0170900:intron 40.0%
GGAGAAAGATGCGTATGAAA+TGG - chr1_4:55357995-55358014 Msa0170900:intron 40.0%
! GTAAGATTGGCCATGTGATT+AGG - chr1_4:55358243-55358262 Msa0170900:CDS 40.0%
TACTTGATGTTTAGCAGCTG+TGG - chr1_4:55358394-55358413 Msa0170900:intron 40.0%
! ATACTTTTCCATGTCCATGG+GGG + chr1_4:55358486-55358505 None:intergenic 40.0%
! CGAATACTTTTCCATGTCCA+TGG + chr1_4:55358489-55358508 None:intergenic 40.0%
GTATTCGCTGAGATGTTCAA+AGG - chr1_4:55358502-55358521 Msa0170900:intron 40.0%
AGAATTAGTTGTGCTGGAGA+AGG + chr1_4:55358577-55358596 None:intergenic 40.0%
TTCTCCAGCACAACTAATTC+TGG - chr1_4:55358576-55358595 Msa0170900:intron 40.0%
!! AGTATTTTAGGCCTTGCACT+TGG - chr1_4:55358911-55358930 Msa0170900:intron 40.0%
AAGGAAAAGAACCAAGTGCA+AGG + chr1_4:55358925-55358944 None:intergenic 40.0%
! GATATTTGGGGCATTCATGA+AGG + chr1_4:55358944-55358963 None:intergenic 40.0%
GTTGCCCTTTAATGTAAGCA+AGG + chr1_4:55358977-55358996 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + chr1_4:55359044-55359063 None:intergenic 40.0%
ATGCAATGTAAGCAAGGGTA+AGG + chr1_4:55359070-55359089 None:intergenic 40.0%
!! TAAATATTGGGTATCGGTGC+TGG - chr1_4:55359095-55359114 Msa0170900:intron 40.0%
! TTAGTTTGGTCCAGACTAAC+TGG - chr1_4:55359365-55359384 Msa0170900:intron 40.0%
TAGTTTGGTCCAGACTAACT+GGG - chr1_4:55359366-55359385 Msa0170900:intron 40.0%
CAATGCAGGTCCTTGATATT+TGG - chr1_4:55359438-55359457 Msa0170900:intron 40.0%
AGAATTGCAGCCTACAGTAA+TGG + chr1_4:55359465-55359484 None:intergenic 40.0%
AGGAGGTGAAAGTTGAAAGA+AGG - chr1_4:55359508-55359527 Msa0170900:CDS 40.0%
! CAGATGCGAGGAAAAGTTTT+GGG - chr1_4:55359621-55359640 Msa0170900:CDS 40.0%
TGCGAATGCGAAACATGGTT+TGG + chr1_4:55348998-55349017 None:intergenic 45.0%
GATTCTGCGAATGCGAAACA+TGG + chr1_4:55349003-55349022 None:intergenic 45.0%
AAGAAGGAGGAGGGAGAATT+GGG + chr1_4:55349109-55349128 None:intergenic 45.0%
AAACCTAGGAAGGAAGAAGG+AGG + chr1_4:55349122-55349141 None:intergenic 45.0%
TCAAATGCATCGTCTGAGCA+AGG - chr1_4:55349265-55349284 Msa0170900:three_prime_UTR 45.0%
CAAATGCATCGTCTGAGCAA+GGG - chr1_4:55349266-55349285 Msa0170900:three_prime_UTR 45.0%
GCTTAAATAATGAAGGCCGG+GGG - chr1_4:55349791-55349810 Msa0170900:intron 45.0%
TTTAGCTGACCCCACTTAGT+GGG - chr1_4:55349856-55349875 Msa0170900:intron 45.0%
CCAAACCTTATCCCACTAAG+TGG + chr1_4:55349870-55349889 None:intergenic 45.0%
CCACTTAGTGGGATAAGGTT+TGG - chr1_4:55349867-55349886 Msa0170900:intron 45.0%
CGCTTACGCCATTTATGACT+TGG - chr1_4:55349995-55350014 Msa0170900:intron 45.0%
TTTCCTATTTCCGCTTCGTG+AGG + chr1_4:55350120-55350139 None:intergenic 45.0%
!!! TCTCTACCCATGTTTTGGTG+AGG - chr1_4:55350151-55350170 Msa0170900:CDS 45.0%
ATGGAGCCTCACCAAAACAT+GGG + chr1_4:55350160-55350179 None:intergenic 45.0%
! AATTTTTCGTCGCTGTCCTG+TGG - chr1_4:55350246-55350265 Msa0170900:CDS 45.0%
!! ACAAATGTTACCGGCTTCTC+GGG + chr1_4:55350430-55350449 None:intergenic 45.0%
!! CACAAATGTTACCGGCTTCT+CGG + chr1_4:55350431-55350450 None:intergenic 45.0%
AAGCCGGTAACATTTGTGGA+GGG - chr1_4:55350433-55350452 Msa0170900:intron 45.0%
TGCAAGAATGACCAGACTGT+AGG + chr1_4:55350464-55350483 None:intergenic 45.0%
TACAGTCTGGTCATTCTTGC+AGG - chr1_4:55350463-55350482 Msa0170900:intron 45.0%
ACAGTCTGGTCATTCTTGCA+GGG - chr1_4:55350464-55350483 Msa0170900:intron 45.0%
TGGGGTAAGACAAGCCAATA+AGG + chr1_4:55350667-55350686 None:intergenic 45.0%
!!! TAGACTCTGGAGTGGTTTTG+GGG + chr1_4:55350685-55350704 None:intergenic 45.0%
!!! CTAGACTCTGGAGTGGTTTT+GGG + chr1_4:55350686-55350705 None:intergenic 45.0%
! AATTGAGCTAGACTCTGGAG+TGG + chr1_4:55350693-55350712 None:intergenic 45.0%
ATATGCAGTCAGCTCGGTAT+AGG - chr1_4:55351260-55351279 Msa0170900:intron 45.0%
GTATTGGATTTCCAGGTCAG+AGG - chr1_4:55351605-55351624 Msa0170900:intron 45.0%
AGGATTGGATCCCCAATTAC+AGG - chr1_4:55351629-55351648 Msa0170900:intron 45.0%
GGATCCCCAATTACAGGTTA+TGG - chr1_4:55351635-55351654 Msa0170900:intron 45.0%
CCCAATTACAGGTTATGGTC+AGG - chr1_4:55351640-55351659 Msa0170900:intron 45.0%
CTCGTCAAAGAATTCCCAAC+AGG - chr1_4:55351681-55351700 Msa0170900:intron 45.0%
ATGTTCAACACCCTCCTCAT+CGG + chr1_4:55351714-55351733 None:intergenic 45.0%
TTGAATAGACCCATCATCCC+TGG - chr1_4:55351803-55351822 Msa0170900:intron 45.0%
TGAATAGACCCATCATCCCT+GGG - chr1_4:55351804-55351823 Msa0170900:intron 45.0%
CTTCTAAACCCAGGGATGAT+GGG + chr1_4:55351815-55351834 None:intergenic 45.0%
TCTTCTAAACCCAGGGATGA+TGG + chr1_4:55351816-55351835 None:intergenic 45.0%
CTGAAAGGTCTTCTAAACCC+AGG + chr1_4:55351824-55351843 None:intergenic 45.0%
GAAAAAGGAAAGGAGAGACG+AGG - chr1_4:55351866-55351885 Msa0170900:intron 45.0%
GACCATCTTCAACCCATTTC+TGG - chr1_4:55352228-55352247 Msa0170900:intron 45.0%
TTTGAAAGGAGTCCTGACGT+CGG - chr1_4:55352399-55352418 Msa0170900:intron 45.0%
!! CAGGCTTTTTCCAAACTGCT+TGG - chr1_4:55353494-55353513 Msa0170900:intron 45.0%
! GCGGATTGTGTAGAAAACGA+AGG + chr1_4:55353669-55353688 Msa0170910:intron 45.0%
AAGGGAAGCTAACTAAGAGG+CGG + chr1_4:55353688-55353707 Msa0170910:intron 45.0%
! CCTCTTAGTTAGCTTCCCTT+GGG - chr1_4:55353688-55353707 Msa0170900:intron 45.0%
TATCGAATGCCTCAAAGAGG+CGG + chr1_4:55353750-55353769 Msa0170910:intron 45.0%
CTGTATCGAATGCCTCAAAG+AGG + chr1_4:55353753-55353772 Msa0170910:intron 45.0%
TCTTCTTCCCTCACCTTGTT+CGG - chr1_4:55354591-55354610 Msa0170900:intron 45.0%
ACACCAAGGATTTCGAAGGT+TGG - chr1_4:55355046-55355065 Msa0170900:intron 45.0%
TCTCCAACCTTCGAAATCCT+TGG + chr1_4:55355052-55355071 Msa0170910:exon 45.0%
GAGAAGATGGAGAGTGGAAT+GGG + chr1_4:55355340-55355359 Msa0170910:three_prime_UTR 45.0%
TTGTTGGAGAAGATGGAGAG+TGG + chr1_4:55355346-55355365 Msa0170910:three_prime_UTR 45.0%
!! CGTATTTGGTGTATCGTCAC+CGG - chr1_4:55356495-55356514 Msa0170900:intron 45.0%
!!! GTTTTTGGGTAGCCGAATTG+GGG + chr1_4:55356930-55356949 None:intergenic 45.0%
!!! CTGTTTTTGGGTAGCCGAAT+TGG + chr1_4:55356932-55356951 None:intergenic 45.0%
! ATGGTGATGTCTCCTTACTC+AGG + chr1_4:55357037-55357056 None:intergenic 45.0%
TATTGGGAAAGAGCTTGCAG+TGG + chr1_4:55357061-55357080 None:intergenic 45.0%
! CTCCCCCAGTTTTTGAATGT+TGG - chr1_4:55357765-55357784 Msa0170900:intron 45.0%
! ATCAGGATGGTGTTGGAAGT+TGG - chr1_4:55357808-55357827 Msa0170900:intron 45.0%
! ATGAAGTGTGATGGTGCACA+GGG + chr1_4:55358091-55358110 None:intergenic 45.0%
TCCAGTGTAAAATAGGGCAG+CGG + chr1_4:55358151-55358170 None:intergenic 45.0%
AACCTAGGTCGCTGTATTCT+AGG - chr1_4:55358176-55358195 Msa0170900:intron 45.0%
! AGATTGGCCATGTGATTAGG+AGG - chr1_4:55358246-55358265 Msa0170900:CDS 45.0%
! GATTGGCCATGTGATTAGGA+GGG - chr1_4:55358247-55358266 Msa0170900:CDS 45.0%
GAGATGTTCAAAGGAGCTGA+CGG - chr1_4:55358511-55358530 Msa0170900:intron 45.0%
GACTCCAGAATTAGTTGTGC+TGG + chr1_4:55358583-55358602 None:intergenic 45.0%
GAATCGAAGTCAGTCTGAAG+TGG - chr1_4:55358783-55358802 Msa0170900:intron 45.0%
GCTTACATTAAAGGGCAACC+CGG - chr1_4:55358978-55358997 Msa0170900:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr1_4:55359045-55359064 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr1_4:55359048-55359067 None:intergenic 45.0%
ATTAAGAACCTGCAGATGCG+AGG - chr1_4:55359609-55359628 Msa0170900:intron 45.0%
! AAACTTTTCCTCGCATCTGC+AGG + chr1_4:55359620-55359639 None:intergenic 45.0%
! GCAGATGCGAGGAAAAGTTT+TGG - chr1_4:55359620-55359639 Msa0170900:CDS 45.0%
!!! TGCGAGGAAAAGTTTTGGGA+AGG - chr1_4:55359625-55359644 Msa0170900:CDS 45.0%
!!! TATGTTTTTTTTTTTTTTTA+AGG + chr1_4:55357586-55357605 None:intergenic 5.0%
!! AATTAAAGTAAAAAATAATA+TGG - chr1_4:55359537-55359556 Msa0170900:intron 5.0%
!! ATTAAAGTAAAAAATAATAT+GGG - chr1_4:55359538-55359557 Msa0170900:intron 5.0%
!! ATTATTAAAAAAATTCATTT+GGG + chr1_4:55359823-55359842 None:intergenic 5.0%
!! AAAACGGCGCCGGTTTCTTA+TGG + chr1_4:55348915-55348934 None:intergenic 50.0%
ACTTCACTTCAAAACGGCGC+CGG + chr1_4:55348925-55348944 None:intergenic 50.0%
GGCGAAGTGAAGACTGAAGA+GGG + chr1_4:55348961-55348980 None:intergenic 50.0%
TTGGAACGAGGAAGAGAACG+TGG + chr1_4:55349083-55349102 None:intergenic 50.0%
!! AGAATTGGGGCATTGGAACG+AGG + chr1_4:55349095-55349114 None:intergenic 50.0%
AGAAGGAGGAGGGAGAATTG+GGG + chr1_4:55349108-55349127 None:intergenic 50.0%
GAAGAAGGAGGAGGGAGAAT+TGG + chr1_4:55349110-55349129 None:intergenic 50.0%
CTAGGAAGGAAGAAGGAGGA+GGG + chr1_4:55349118-55349137 None:intergenic 50.0%
CACTTAACCCAAGTCACGTC+AGG + chr1_4:55349488-55349507 None:intergenic 50.0%
! GACGTGACTTGGGTTAAGTG+TGG - chr1_4:55349488-55349507 Msa0170900:intron 50.0%
CTTTAGCTGACCCCACTTAG+TGG - chr1_4:55349855-55349874 Msa0170900:intron 50.0%
TGACCCCACTTAGTGGGATA+AGG - chr1_4:55349862-55349881 Msa0170900:intron 50.0%
CATGGAGCCTCACCAAAACA+TGG + chr1_4:55350161-55350180 None:intergenic 50.0%
CGAGAAGCCGGTAACATTTG+TGG - chr1_4:55350429-55350448 Msa0170900:intron 50.0%
GAAGCCGGTAACATTTGTGG+AGG - chr1_4:55350432-55350451 Msa0170900:intron 50.0%
AGCCGGTAACATTTGTGGAG+GGG - chr1_4:55350434-55350453 Msa0170900:intron 50.0%
!!! GCTAGACTCTGGAGTGGTTT+TGG + chr1_4:55350687-55350706 None:intergenic 50.0%
AGGTGATTGGAGTTGGGTGA+TGG - chr1_4:55351384-55351403 Msa0170900:intron 50.0%
TCATCGGTCCAAACCCTGTT+GGG + chr1_4:55351698-55351717 None:intergenic 50.0%
AGACCTTTCAGAAAGGAGGG+AGG - chr1_4:55351833-55351852 Msa0170900:intron 50.0%
TCTCCTCCCTCCTTTCTGAA+AGG + chr1_4:55351839-55351858 None:intergenic 50.0%
!! GGGTACCGGTGATGTTGTTA+AGG + chr1_4:55352567-55352586 None:intergenic 50.0%
CGGATTAAAGGTTGGGGTAC+CGG + chr1_4:55352581-55352600 None:intergenic 50.0%
TTGTCGTGTGCCAAGCAGTT+TGG + chr1_4:55353507-55353526 Msa0170910:intron 50.0%
GAAATGTGCAGGTGTGTTGG+TGG + chr1_4:55353595-55353614 Msa0170910:intron 50.0%
ATCGTCAACGTCAGGAAGGT+TGG + chr1_4:55353646-55353665 Msa0170910:intron 50.0%
AAGGATCGTCAACGTCAGGA+AGG + chr1_4:55353650-55353669 Msa0170910:intron 50.0%
AACGAAGGATCGTCAACGTC+AGG + chr1_4:55353654-55353673 Msa0170910:intron 50.0%
! GCCTCTTAGTTAGCTTCCCT+TGG - chr1_4:55353687-55353706 Msa0170900:intron 50.0%
CCCAAGGGAAGCTAACTAAG+AGG + chr1_4:55353691-55353710 Msa0170910:intron 50.0%
! AGTTAGCTTCCCTTGGGAGA+TGG - chr1_4:55353694-55353713 Msa0170900:intron 50.0%
CGAAATCGTCCATCTCCCAA+GGG + chr1_4:55353706-55353725 Msa0170910:intron 50.0%
TCGAAATCGTCCATCTCCCA+AGG + chr1_4:55353707-55353726 Msa0170910:intron 50.0%
!! GTAAGTAGCACCGACAAGCT+TGG + chr1_4:55353784-55353803 Msa0170910:intron 50.0%
TCCATTCCCCAACATATCCC+TGG - chr1_4:55353845-55353864 Msa0170900:intron 50.0%
TCCAGGGATATGTTGGGGAA+TGG + chr1_4:55353849-55353868 Msa0170910:intron 50.0%
!! CCTTCGAAATCCTTGGTGTC+TGG + chr1_4:55355045-55355064 Msa0170910:exon 50.0%
CCAGACACCAAGGATTTCGA+AGG - chr1_4:55355042-55355061 Msa0170900:intron 50.0%
GGAGAAGATGGAGAGTGGAA+TGG + chr1_4:55355341-55355360 Msa0170910:three_prime_UTR 50.0%
! AATGGTGATGAAGCGATGGG+TGG + chr1_4:55355385-55355404 Msa0170910:three_prime_UTR 50.0%
ATTAGGACTATGCCGTCCAG+AGG + chr1_4:55355572-55355591 None:intergenic 50.0%
ATGAGGGAGAAGGGATACGA+CGG - chr1_4:55355964-55355983 Msa0170900:intron 50.0%
GAGAGGAAGAAGATGCAGGA+TGG - chr1_4:55355994-55356013 Msa0170900:intron 50.0%
GGAAGAAGATGCAGGATGGA+AGG - chr1_4:55355998-55356017 Msa0170900:intron 50.0%
GGAAAGAGCTTGCAGTGGTA+TGG + chr1_4:55357056-55357075 None:intergenic 50.0%
TGAGACAAGGGAATCGGTGT+TGG + chr1_4:55357422-55357441 None:intergenic 50.0%
! GATGGTGTTGGAAGTTGGAC+TGG - chr1_4:55357813-55357832 Msa0170900:intron 50.0%
! CATGAAGTGTGATGGTGCAC+AGG + chr1_4:55358092-55358111 None:intergenic 50.0%
GTGCACCATCACACTTCATG+CGG - chr1_4:55358092-55358111 Msa0170900:intron 50.0%
! ATGCAGGAGCTTTAGTGCAC+CGG + chr1_4:55359000-55359019 None:intergenic 50.0%
ACTAAAGCTCCTGCATACGC+AGG - chr1_4:55359004-55359023 Msa0170900:intron 50.0%
CTAAAGCTCCTGCATACGCA+GGG - chr1_4:55359005-55359024 Msa0170900:intron 50.0%
CTTCCAGTTCCTTGTTCGAC+AGG - chr1_4:55359488-55359507 Msa0170900:CDS 50.0%
CTTTCACCTCCTGTCGAACA+AGG + chr1_4:55359500-55359519 None:intergenic 50.0%
CGGCGAAGTGAAGACTGAAG+AGG + chr1_4:55348962-55348981 None:intergenic 55.0%
! AGAAAGTGCATTGCGGGTGC+AGG + chr1_4:55349048-55349067 None:intergenic 55.0%
AGGAGGGAGAATTGGGGCAT+TGG + chr1_4:55349102-55349121 None:intergenic 55.0%
CCTAGGAAGGAAGAAGGAGG+AGG + chr1_4:55349119-55349138 None:intergenic 55.0%
CCTCCTCCTTCTTCCTTCCT+AGG - chr1_4:55349116-55349135 Msa0170900:three_prime_UTR 55.0%
TGCTCACACCTGACGTGACT+TGG - chr1_4:55349477-55349496 Msa0170900:intron 55.0%
GCTCACACCTGACGTGACTT+GGG - chr1_4:55349478-55349497 Msa0170900:intron 55.0%
AATTGGAGTTTGCGCGTGCG+CGG - chr1_4:55349615-55349634 Msa0170900:intron 55.0%
ACGCACACGCTAACCCCAAT+TGG + chr1_4:55349669-55349688 None:intergenic 55.0%
GTGAGGCGTACACGCATACA+AGG + chr1_4:55350103-55350122 None:intergenic 55.0%
ACGCCTCACGAAGCGGAAAT+AGG - chr1_4:55350114-55350133 Msa0170900:exon 55.0%
GCTGTCCTGTGGCCATAGAA+TGG - chr1_4:55350257-55350276 Msa0170900:CDS 55.0%
CACAGCCATTCTATGGCCAC+AGG + chr1_4:55350265-55350284 None:intergenic 55.0%
GCCGGTAACATTTGTGGAGG+GGG - chr1_4:55350435-55350454 Msa0170900:intron 55.0%
GCCCCCTCCACAAATGTTAC+CGG + chr1_4:55350439-55350458 None:intergenic 55.0%
CTGGTCATTCTTGCAGGGCT+TGG - chr1_4:55350469-55350488 Msa0170900:intron 55.0%
TCTTGCAGGGCTTGGAGTTG+CGG - chr1_4:55350477-55350496 Msa0170900:intron 55.0%
TGGATTTCCAGGTCAGAGGG+AGG - chr1_4:55351609-55351628 Msa0170900:intron 55.0%
TTCCAGGTCAGAGGGAGGAT+TGG - chr1_4:55351614-55351633 Msa0170900:intron 55.0%
ATCCAATCCTCCCTCTGACC+TGG + chr1_4:55351619-55351638 None:intergenic 55.0%
CTCATCGGTCCAAACCCTGT+TGG + chr1_4:55351699-55351718 None:intergenic 55.0%
CAACAGGGTTTGGACCGATG+AGG - chr1_4:55351697-55351716 Msa0170900:intron 55.0%
AGGGTTTGGACCGATGAGGA+GGG - chr1_4:55351701-55351720 Msa0170900:intron 55.0%
!! GGAGGGTGTTGAACATGTCG+AGG - chr1_4:55351718-55351737 Msa0170900:intron 55.0%
AGGAAAGGAGAGACGAGGTG+TGG - chr1_4:55351871-55351890 Msa0170900:intron 55.0%
GAGAGACGAGGTGTGGTTCT+TGG - chr1_4:55351878-55351897 Msa0170900:intron 55.0%
AAAGGAGTCCTGACGTCGGA+AGG - chr1_4:55352403-55352422 Msa0170900:intron 55.0%
!! ACGTCAGGAAGGTTGGTGGT+GGG + chr1_4:55353639-55353658 Msa0170910:intron 55.0%
!! AACGTCAGGAAGGTTGGTGG+TGG + chr1_4:55353640-55353659 Msa0170910:intron 55.0%
GTCAACGTCAGGAAGGTTGG+TGG + chr1_4:55353643-55353662 Msa0170910:intron 55.0%
ACCATCAAGCCGCCTCTTTG+AGG - chr1_4:55353738-55353757 Msa0170900:intron 55.0%
GGGGAATGGATGCACCCTTA+TGG + chr1_4:55353835-55353854 Msa0170910:intron 55.0%
GGAGAAGGGATACGACGGAT+GGG - chr1_4:55355969-55355988 Msa0170900:intron 55.0%
GAGAAGGGATACGACGGATG+GGG - chr1_4:55355970-55355989 Msa0170900:intron 55.0%
GGTGCACAGGGCTCAACAAT+TGG + chr1_4:55358079-55358098 None:intergenic 55.0%
GGTGACCGCATGAAGTGTGA+TGG + chr1_4:55358100-55358119 None:intergenic 55.0%
! GCCGCTGCCCTATTTTACAC+TGG - chr1_4:55358147-55358166 Msa0170900:intron 55.0%
CGCCTAGAATACAGCGACCT+AGG + chr1_4:55358181-55358200 None:intergenic 55.0%
TCAAAGGAGCTGACGGTGAG+TGG - chr1_4:55358518-55358537 Msa0170900:intron 55.0%
! TGCAGGAGCTTTAGTGCACC+GGG + chr1_4:55358999-55359018 None:intergenic 55.0%
GGTCCAGACTAACTGGGACT+TGG - chr1_4:55359372-55359391 Msa0170900:intron 55.0%
GGACCAAGTCCCAGTTAGTC+TGG + chr1_4:55359378-55359397 None:intergenic 55.0%
CCTCCTGTCGAACAAGGAAC+TGG + chr1_4:55359494-55359513 None:intergenic 55.0%
CCAGTTCCTTGTTCGACAGG+AGG - chr1_4:55359491-55359510 Msa0170900:CDS 55.0%
GCGCACGCGCAAACTCCAAT+TGG + chr1_4:55349616-55349635 None:intergenic 60.0%
TGCGTGTACGCCTCACGAAG+CGG - chr1_4:55350107-55350126 Msa0170900:exon 60.0%
CAGGGTTTGGACCGATGAGG+AGG - chr1_4:55351700-55351719 Msa0170900:intron 60.0%
GTATGACCCGTGCGAAGCAC+GGG + chr1_4:55351941-55351960 None:intergenic 60.0%
GGTATGACCCGTGCGAAGCA+CGG + chr1_4:55351942-55351961 None:intergenic 60.0%
! TCCTGACGTCGGAAGGTGCA+AGG - chr1_4:55352410-55352429 Msa0170900:intron 60.0%
TCCTTGCACCTTCCGACGTC+AGG + chr1_4:55352414-55352433 None:intergenic 60.0%
!! CGTCAGGAAGGTTGGTGGTG+GGG + chr1_4:55353638-55353657 Msa0170910:intron 60.0%
GCCTCAAAGAGGCGGCTTGA+TGG + chr1_4:55353742-55353761 Msa0170910:intron 60.0%
GGGAGAAGGGATACGACGGA+TGG - chr1_4:55355968-55355987 Msa0170900:intron 60.0%
GGGCGAGAGGAAGAAGATGC+AGG - chr1_4:55355990-55356009 Msa0170900:intron 60.0%
TTCTTTATCCGGGGCCCCCA+TGG - chr1_4:55358469-55358488 Msa0170900:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr1_4:55359032-55359051 None:intergenic 60.0%
GGGTGCAGGATGCGAGTGCA+CGG + chr1_4:55349034-55349053 None:intergenic 65.0%
CTTGGAGTTGCGGCTGCTGC+TGG - chr1_4:55350487-55350506 Msa0170900:intron 65.0%
CCATCGACCCGTGCTTCGCA+CGG - chr1_4:55351931-55351950 Msa0170900:intron 65.0%
CATCGACCCGTGCTTCGCAC+GGG - chr1_4:55351932-55351951 Msa0170900:intron 65.0%
GATACGACGGATGGGGCGAG+AGG - chr1_4:55355977-55355996 Msa0170900:intron 65.0%
TTCCATGTCCATGGGGGCCC+CGG + chr1_4:55358480-55358499 None:intergenic 65.0%
GCTCCTGCATACGCAGGGTC+CGG - chr1_4:55359010-55359029 Msa0170900:intron 65.0%
CTCCTGCATACGCAGGGTCC+GGG - chr1_4:55359011-55359030 Msa0170900:intron 65.0%
TTCCCGGACCCTGCGTATGC+AGG + chr1_4:55359016-55359035 None:intergenic 65.0%
TGCATACGCAGGGTCCGGGA+AGG - chr1_4:55359015-55359034 Msa0170900:intron 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr1_4:55359016-55359035 Msa0170900:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr1_4:55359017-55359036 Msa0170900:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr1_4:55359030-55359049 Msa0170900:intron 65.0%
!! GGAGGGGGCGTCCTACAGTC+TGG - chr1_4:55350450-55350469 Msa0170900:intron 70.0%
CCGTGCGAAGCACGGGTCGA+TGG + chr1_4:55351934-55351953 None:intergenic 70.0%
ATCCGGGGCCCCCATGGACA+TGG - chr1_4:55358475-55358494 Msa0170900:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 55348890 55359864 55348890 ID=Msa0170900;Name=Msa0170900
chr1_4 mRNA 55348890 55359864 55348890 ID=Msa0170900-mRNA-1;Parent=Msa0170900;Name=Msa0170900-mRNA-1;_AED=0.02;_eAED=0.02;_QI=112|1|1|1|0.83|0.71|7|433|249
chr1_4 exon 55348890 55349308 55348890 ID=Msa0170900-mRNA-1:exon:16538;Parent=Msa0170900-mRNA-1
chr1_4 exon 55350107 55350291 55350107 ID=Msa0170900-mRNA-1:exon:16537;Parent=Msa0170900-mRNA-1
chr1_4 exon 55357015 55357134 55357015 ID=Msa0170900-mRNA-1:exon:16536;Parent=Msa0170900-mRNA-1
chr1_4 exon 55357888 55357936 55357888 ID=Msa0170900-mRNA-1:exon:16535;Parent=Msa0170900-mRNA-1
chr1_4 exon 55358206 55358387 55358206 ID=Msa0170900-mRNA-1:exon:16534;Parent=Msa0170900-mRNA-1
chr1_4 exon 55359451 55359542 55359451 ID=Msa0170900-mRNA-1:exon:16533;Parent=Msa0170900-mRNA-1
chr1_4 exon 55359617 55359864 55359617 ID=Msa0170900-mRNA-1:exon:16532;Parent=Msa0170900-mRNA-1
chr1_4 five_prime_UTR 55359753 55359864 55359753 ID=Msa0170900-mRNA-1:five_prime_utr;Parent=Msa0170900-mRNA-1
chr1_4 CDS 55359617 55359752 55359617 ID=Msa0170900-mRNA-1:cds;Parent=Msa0170900-mRNA-1
chr1_4 CDS 55359451 55359542 55359451 ID=Msa0170900-mRNA-1:cds;Parent=Msa0170900-mRNA-1
chr1_4 CDS 55358206 55358387 55358206 ID=Msa0170900-mRNA-1:cds;Parent=Msa0170900-mRNA-1
chr1_4 CDS 55357888 55357936 55357888 ID=Msa0170900-mRNA-1:cds;Parent=Msa0170900-mRNA-1
chr1_4 CDS 55357015 55357134 55357015 ID=Msa0170900-mRNA-1:cds;Parent=Msa0170900-mRNA-1
chr1_4 CDS 55350121 55350291 55350121 ID=Msa0170900-mRNA-1:cds;Parent=Msa0170900-mRNA-1
chr1_4 three_prime_UTR 55350107 55350120 55350107 ID=Msa0170900-mRNA-1:three_prime_utr;Parent=Msa0170900-mRNA-1
chr1_4 three_prime_UTR 55348890 55349308 55348890 ID=Msa0170900-mRNA-1:three_prime_utr;Parent=Msa0170900-mRNA-1
Gene Sequence

>Msa0170900

ATGTTTCGCATTCGCAGAATCTTGTCTTACCGTGCACTCGCATCCTGCACCCGCAATGCACTTTCTTCATCATCGCAACCACGTTCTCTTCCTCGTTCCAATGCCCCAATTCTCCCTCCTCCTTCTTCCTTCCTAGGTGTTGGAATTGCAGAAAACTATGGATCAACCTCTTTGACAAGGTTTATGTCTTCAAATGCATCGTCTGAGCAAGGGAAAAACACTGAAAAGACAAAAAAAGAGTTAAAAAATGTTGAGGATCCATTCGATGATGCTCCAACATATAATATTCCCGAGAAGCCGGTAACATTTGTGGAGGGGGCGTCCTACAGTCTGGTCATTCTTGCAGGGCTTGGAGTTGCGGCTGCTGCTGGATATTCTGTTTTCAAGGAGCTTATATTTCAACCCAAAGAGTACAAGATTTATAACAAGGCTCTCAAAAGAATTCAAGATGATGGTCAGGTCAGAGGGAGGATTGGATCCCCAATTACAGGTTATGGTCAGGAGAGTAGAAATCGCGCTGCTCGTCAAAGAATTCCCAACAGGGTTTGGACCGATGAGGAGGGTGTTGAACATGTCGAGGTTAATTTCTTTATCCGGGGCCCCCATGGACATGGAAAAGTATTCGCTGAGATGTTCAAAGGAGCTGACGGTGAGTGGAGTTACACATACTTGATTGTTGAGATTAGAGCACCTTCTCCAGCACAACTAATTCTGGAGTCATACATCCCTTCTTACAACCCAAACAAGTAG
Protein sequence

>Msa0170900

MFRIRRILSYRALASCTRNALSSSSQPRSLPRSNAPILPPPSSFLGVGIAENYGSTSLTRFMSSNASSEQGKNTEKTKKELKNVEDPFDDAPTYNIPEKPVTFVEGASYSLVILAGLGVAAAAGYSVFKELIFQPKEYKIYNKALKRIQDDGQVRGRIGSPITGYGQESRNRAARQRIPNRVWTDEEGVEHVEVNFFIRGPHGHGKVFAEMFKGADGEWSYTYLIVEIRAPSPAQLILESYIPSYNPNK*