AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0173920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0173920 MtrunA17_Chr1g0194121 97.607 1003 22 1 1 1001 1 1003 0.0 2039
Msa0173920 MtrunA17_Chr7g0270541 75.248 1010 224 11 8 1001 2 1001 0.0 1491
Msa0173920 MtrunA17_Chr2g0302791 49.033 1034 471 20 7 1000 7 1024 0.0 909
Msa0173920 MtrunA17_Chr1g0162871 33.221 596 360 11 415 1000 435 1002 2.60e-86 299
Msa0173920 MtrunA17_Chr1g0162871 50.303 165 73 4 113 271 74 235 2.99e-38 155
Msa0173920 MtrunA17_Chr8g0360361 67.033 91 30 0 144 234 64 154 2.63e-33 127
Msa0173920 MtrunA17_Chr8g0334671 56.522 115 41 2 114 219 147 261 9.57e-33 130
Msa0173920 MtrunA17_Chr8g0386271 57.143 98 42 0 131 228 85 182 2.29e-31 127
Msa0173920 MtrunA17_Chr4g0046991 62.921 89 33 0 131 219 59 147 4.22e-31 119
Msa0173920 MtrunA17_Chr5g0420051 61.798 89 34 0 130 218 166 254 1.13e-30 126
Msa0173920 MtrunA17_Chr2g0308321 64.773 88 31 0 131 218 157 244 2.19e-30 127
Msa0173920 MtrunA17_Chr2g0282521 63.043 92 33 1 131 222 51 141 2.42e-30 117
Msa0173920 MtrunA17_Chr7g0231911 58.511 94 39 0 135 228 139 232 3.46e-30 122
Msa0173920 MtrunA17_Chr4g0061651 64.773 88 28 1 131 218 112 196 2.93e-29 122
Msa0173920 MtrunA17_Chr3g0122411 56.842 95 41 0 130 224 150 244 8.64e-29 120
Msa0173920 MtrunA17_Chr2g0286661 25.797 345 223 9 428 749 260 594 1.47e-28 123
Msa0173920 MtrunA17_Chr2g0286661 48.315 89 46 0 130 218 88 176 9.84e-21 98.2
Msa0173920 MtrunA17_Chr7g0224821 46.970 132 62 2 87 218 27 150 2.06e-28 118
Msa0173920 MtrunA17_Chr3g0132091 50.435 115 54 2 131 242 58 172 2.07e-28 117
Msa0173920 MtrunA17_Chr7g0258471 68.919 74 23 0 145 218 142 215 2.26e-27 116
Msa0173920 MtrunA17_Chr8g0377421 56.250 80 35 0 145 224 132 211 9.70e-24 103
Msa0173920 MtrunA17_Chr8g0377401 58.108 74 31 0 144 217 161 234 2.63e-21 94.7
Msa0173920 MtrunA17_Chr2g0317041 61.290 62 24 0 130 191 84 145 7.23e-20 87.4
Msa0173920 MtrunA17_Chr1g0175031 55.556 54 24 0 138 191 67 120 5.53e-13 67.0
Msa0173920 MtrunA17_Chr8g0377431 39.048 105 57 2 98 200 107 206 6.47e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0173920 AT2G47070.1 57.015 1005 292 29 6 1001 8 881 0.0 994
Msa0173920 AT3G60030.1 56.392 1009 325 28 16 1001 11 927 0.0 989
Msa0173920 AT2G47070.2 58.502 841 252 21 169 1001 1 752 0.0 889
Msa0173920 AT1G20980.1 32.419 583 358 15 425 1000 481 1034 4.94e-79 279
Msa0173920 AT1G20980.1 41.736 242 94 7 26 258 38 241 6.22e-39 157
Msa0173920 AT1G76580.1 30.862 580 355 13 427 1000 480 1019 6.03e-76 270
Msa0173920 AT1G76580.1 35.165 273 104 7 30 295 40 246 1.40e-35 147
Msa0173920 AT1G76580.2 39.565 230 82 7 30 250 40 221 3.02e-36 147
Msa0173920 AT1G76580.2 35.909 220 133 4 427 644 480 693 9.20e-32 133
Msa0173920 AT1G76580.3 39.565 230 82 7 30 250 40 221 3.27e-36 147
Msa0173920 AT1G76580.3 36.239 218 131 4 427 642 480 691 3.42e-31 131
Msa0173920 AT2G33810.1 61.798 89 34 0 132 220 41 129 3.34e-32 122
Msa0173920 AT1G69170.1 65.909 88 30 0 131 218 110 197 7.51e-32 129
Msa0173920 AT1G02065.1 69.620 79 24 0 145 223 188 266 3.05e-31 126
Msa0173920 AT1G53160.2 60.606 99 33 2 132 224 35 133 6.57e-31 120
Msa0173920 AT1G53160.1 60.606 99 33 2 132 224 35 133 6.57e-31 120
Msa0173920 AT1G53160.3 60.606 99 33 2 132 224 35 133 8.29e-31 119
Msa0173920 AT3G15270.1 58.163 98 38 1 134 228 49 146 3.13e-30 118
Msa0173920 AT5G50570.1 55.319 94 40 1 138 231 94 185 6.64e-29 120
Msa0173920 AT5G50570.2 55.319 94 40 1 138 231 94 185 6.64e-29 120
Msa0173920 AT5G50670.1 55.319 94 40 1 138 231 94 185 6.64e-29 120
Msa0173920 AT5G50670.2 55.319 94 40 1 138 231 94 185 6.64e-29 120
Msa0173920 AT5G43270.3 56.701 97 42 0 145 241 169 265 6.86e-29 121
Msa0173920 AT5G43270.1 56.701 97 42 0 145 241 169 265 6.86e-29 121
Msa0173920 AT5G43270.2 56.701 97 42 0 145 241 169 265 6.86e-29 121
Msa0173920 AT1G27370.6 50.450 111 51 2 108 218 143 249 3.44e-28 117
Msa0173920 AT1G27370.1 50.450 111 51 2 108 218 143 249 4.46e-28 118
Msa0173920 AT1G27370.5 50.450 111 51 2 108 218 143 249 4.46e-28 118
Msa0173920 AT1G27370.3 50.450 111 51 2 108 218 143 249 4.46e-28 118
Msa0173920 AT1G27370.2 50.450 111 51 2 108 218 143 249 4.46e-28 118
Msa0173920 AT1G27370.4 50.450 111 51 2 108 218 143 249 4.46e-28 118
Msa0173920 AT1G27370.7 50.450 111 51 2 108 218 143 249 4.46e-28 118
Msa0173920 AT1G27360.2 50.450 111 50 2 108 218 143 248 1.65e-26 113
Msa0173920 AT1G27360.1 50.450 111 50 2 108 218 143 248 1.65e-26 113
Msa0173920 AT1G27360.3 50.450 111 50 2 108 218 143 248 1.65e-26 113
Msa0173920 AT1G27360.4 50.450 111 50 2 108 218 143 248 1.65e-26 113
Msa0173920 AT3G57920.1 58.242 91 38 0 128 218 42 132 4.29e-26 111
Msa0173920 AT5G18830.2 27.302 315 194 7 380 670 239 542 8.93e-26 115
Msa0173920 AT5G18830.2 54.545 88 39 1 131 218 125 211 2.44e-22 103
Msa0173920 AT5G18830.1 27.302 315 194 7 380 670 239 542 9.77e-26 114
Msa0173920 AT5G18830.1 54.545 88 39 1 131 218 125 211 2.61e-22 103
Msa0173920 AT5G18830.3 27.302 315 194 7 380 670 239 542 1.05e-25 114
Msa0173920 AT5G18830.3 54.545 88 39 1 131 218 125 211 2.61e-22 103
Msa0173920 AT2G42200.1 66.216 74 25 0 145 218 74 147 1.24e-25 110
Msa0173920 AT1G02065.2 68.750 48 15 0 145 192 188 235 6.97e-16 79.0

Find 280 sgRNAs with CRISPR-Local

Find 651 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTCGTACTGTAATATT+TGG 0.138110 1_4:+59400909 Msa0173920:three_prime_UTR
TTATGTGGATTGCTCTTAAT+TGG 0.197692 1_4:+59393166 Msa0173920:five_prime_UTR
GCAACAATTATAGCAAAATT+TGG 0.200968 1_4:+59398491 Msa0173920:CDS
TTTCCAGTCCCTTCAATATC+TGG 0.226153 1_4:-59399313 None:intergenic
TTAATTGTGAATTGTGATTA+TGG 0.233638 1_4:+59393343 Msa0173920:exon
GGATTGTTGGGGATGAATTA+AGG 0.244299 1_4:+59393218 Msa0173920:five_prime_UTR
ACCAACAAGCGCCTTGTCTT+TGG 0.258264 1_4:-59399686 None:intergenic
ATTGCTCTCTGTCGTATTGC+TGG 0.287599 1_4:-59400397 None:intergenic
TACATATTATTATCCTTCTA+TGG 0.291725 1_4:+59400813 Msa0173920:three_prime_UTR
AGAACGGTTCACATGGCTTA+TGG 0.294581 1_4:+59399453 Msa0173920:CDS
TGGACATTATTATCCTTCTA+TGG 0.295516 1_4:+59400833 Msa0173920:three_prime_UTR
AGATCTTGAGAAAGGGAATA+AGG 0.299596 1_4:+59393619 Msa0173920:CDS
GAAATCCATAGCTTGACTTT+TGG 0.299906 1_4:-59399344 None:intergenic
TTGTTAAAACTCAATTTGTT+AGG 0.313618 1_4:+59400886 Msa0173920:three_prime_UTR
CTGGTTGTGTTTGTTTGTAT+TGG 0.315332 1_4:+59400769 Msa0173920:three_prime_UTR
GGGAATGGAATTTGAATGAT+TGG 0.316466 1_4:+59393447 Msa0173920:CDS
AAACTAAATGACCGAGGTTT+AGG 0.318812 1_4:+59400745 Msa0173920:three_prime_UTR
TATGGATTTCATTCATGAAA+TGG 0.320879 1_4:+59399357 Msa0173920:CDS
TTTATTCTCCAATGGTTCTC+AGG 0.328039 1_4:+59396866 Msa0173920:CDS
TTTGATGAAACTGTTAATAA+AGG 0.328176 1_4:+59399532 Msa0173920:CDS
ACAGAAGCCAATTGAAATAT+AGG 0.336809 1_4:+59399392 Msa0173920:CDS
ACCTTGTGGCAGGGCGCATC+AGG 0.339254 1_4:-59398576 None:intergenic
GCACTTAGCTTAAATCTTGC+AGG 0.340035 1_4:+59393698 Msa0173920:CDS
CCAACAAGCGCCTTGTCTTT+GGG 0.348507 1_4:-59399685 None:intergenic
TCATTTGTTGGACTTCCATT+AGG 0.355984 1_4:-59395347 None:intergenic
TAGTTGTTGATTTGTGAAAT+TGG 0.356206 1_4:+59393105 Msa0173920:five_prime_UTR
AGTTTGTGAGATGCATTCTA+AGG 0.361547 1_4:+59393856 Msa0173920:CDS
CCCACTCGGGTCTGGGATCC+CGG 0.362139 1_4:+59393550 Msa0173920:CDS
CTCGGCCTGACGCAGATAAA+TGG 0.364403 1_4:-59398102 None:intergenic
ATCTATTAACTCATCTTCTA+AGG 0.366559 1_4:+59396727 Msa0173920:CDS
AGCCATGTGAACCGTTCTAA+TGG 0.369029 1_4:-59399448 None:intergenic
GTATCAAGCACTTTCAGAAA+TGG 0.373545 1_4:+59399570 Msa0173920:CDS
CAGACCTGCAATGCTCTCTA+TGG 0.376267 1_4:+59400554 Msa0173920:CDS
TAACCATCCTATATTTCAAT+TGG 0.385181 1_4:-59399399 None:intergenic
CTAAGTGAATGTAAGTATAA+TGG 0.386411 1_4:-59400320 None:intergenic
TTTGATGCCGGTACAGCAAT+TGG 0.388018 1_4:-59398523 None:intergenic
GAGAAATAGCAAACAGTTAG+TGG 0.388325 1_4:+59399615 Msa0173920:CDS
TTCCAGTTTGATTAAGCTGC+TGG 0.388701 1_4:+59398260 Msa0173920:CDS
AGGTTAATGTGTGCTTTAGA+AGG 0.390854 1_4:+59398753 Msa0173920:intron
CGGAACATGTATAGAACTTC+GGG 0.394622 1_4:-59400627 None:intergenic
TAATTGTGAATTGTGATTAT+GGG 0.396686 1_4:+59393344 Msa0173920:exon
ACCTTTCAGATGGGAATCAT+TGG 0.397557 1_4:+59400650 Msa0173920:CDS
AATCAAGAAGCTGTTCCTAA+TGG 0.397811 1_4:+59395332 Msa0173920:CDS
GCTTCTCCGCTAGAACTAGA+AGG 0.400011 1_4:-59397254 None:intergenic
CTAGTCTGATCATCATTTGT+TGG 0.400423 1_4:-59395359 None:intergenic
AGTACAAGAGGAAATTCATT+TGG 0.402660 1_4:-59397909 None:intergenic
CAGGTACAGAACATGAAAAT+TGG 0.403924 1_4:-59398851 None:intergenic
ATCCAGCAGCTTAATCAAAC+TGG 0.406521 1_4:-59398262 None:intergenic
GCCACCATAGAGAGCATTGC+AGG 0.412655 1_4:-59400558 None:intergenic
AGATGCATTCTAAGGCTAGT+AGG 0.412881 1_4:+59393864 Msa0173920:CDS
GAATCAAATGCAACAAGAAA+TGG 0.413695 1_4:+59396929 Msa0173920:CDS
ATGTCTCAGATGATACGTTT+TGG 0.415679 1_4:+59398283 Msa0173920:CDS
CTCTTGCTTCCGAGTAAGCC+GGG 0.419245 1_4:-59397025 None:intergenic
TGCTTTAGAAGGAAAATATC+TGG 0.420117 1_4:+59398764 Msa0173920:CDS
TCATTCACTAGCTTAGAGAT+TGG 0.421089 1_4:+59400441 Msa0173920:CDS
TTCGAACCGAGCTGTTTGTC+AGG 0.422100 1_4:+59393778 Msa0173920:CDS
ATGGATTTCATTCATGAAAT+GGG 0.424476 1_4:+59399358 Msa0173920:CDS
CAAGAGAATTTGTTGAGAGA+AGG 0.430841 1_4:+59396810 Msa0173920:CDS
TATCAAGCACTTTCAGAAAT+GGG 0.431397 1_4:+59399571 Msa0173920:CDS
TACTGTTGTACTTGATTATG+TGG 0.432479 1_4:+59393151 Msa0173920:five_prime_UTR
TTTGACCATTTATCTGCGTC+AGG 0.436128 1_4:+59398097 Msa0173920:CDS
AGGATAATAATGTCCATAGA+AGG 0.436231 1_4:-59400826 None:intergenic
CCTGATGCTGTTGGTCCTGC+CGG 0.436534 1_4:+59399736 Msa0173920:CDS
AAGAGAATTTGTTGAGAGAA+GGG 0.437952 1_4:+59396811 Msa0173920:CDS
AGATGGTTCCGAGGATGTAC+TGG 0.438143 1_4:+59399789 Msa0173920:CDS
CGCTAGAACTAGAAGGGGAC+TGG 0.439772 1_4:-59397247 None:intergenic
AAAACTTGATAGGTCATGTA+TGG 0.442282 1_4:+59400712 Msa0173920:three_prime_UTR
GTGGGATGGGGAAGAGGTCA+AGG 0.444627 1_4:+59393426 Msa0173920:CDS
TGTACAAGTATGTCCATAGA+AGG 0.446724 1_4:-59400846 None:intergenic
CCCAAAGACAAGGCGCTTGT+TGG 0.448364 1_4:+59399685 Msa0173920:CDS
TTGCTCTCTGTCGTATTGCT+GGG 0.448931 1_4:-59400396 None:intergenic
AGCTGTCGAAGACGCTTGGC+TGG 0.450145 1_4:+59395284 Msa0173920:CDS
TCAATTGGCAGATTCTAGAT+TGG 0.452129 1_4:+59398021 Msa0173920:intron
AGATGGGAATCATTGGAGTT+CGG 0.452671 1_4:+59400657 Msa0173920:CDS
TCTGAATTTCCACTTGTTTG+AGG 0.453259 1_4:-59397212 None:intergenic
TATAGCTAGCCGTGTGAATC+CGG 0.453788 1_4:+59393490 Msa0173920:CDS
CGCAAACTCTCCGCCTGCAC+CGG 0.454733 1_4:-59393509 None:intergenic
CATTTATCTGCGTCAGGCCG+AGG 0.455554 1_4:+59398103 Msa0173920:CDS
GTCAGATCAGCCTACAGATC+AGG 0.456789 1_4:+59396704 Msa0173920:CDS
GGGTCTGGGATCCCGGTGGT+TGG 0.459078 1_4:+59393557 Msa0173920:CDS
TGTGATGGTATATTCTGTTA+TGG 0.462083 1_4:-59392824 None:intergenic
TTTCCGTCCCTTTCCACAGC+CGG 0.462810 1_4:-59393731 None:intergenic
TTATTCTCCAATGGTTCTCA+GGG 0.464671 1_4:+59396867 Msa0173920:CDS
TTAAATTAATTATAGCTGAC+AGG 0.464842 1_4:+59396682 Msa0173920:intron
GGATAGGAAAAGGAGAGTGC+TGG 0.464900 1_4:+59393646 Msa0173920:CDS
AGGATGGTTAACTTGAACTC+TGG 0.466960 1_4:+59399412 Msa0173920:CDS
ATAAGGAAGGGGATAGGAAA+AGG 0.467611 1_4:+59393636 Msa0173920:CDS
AAGGGAATAAGGAAGGGGAT+AGG 0.469713 1_4:+59393630 Msa0173920:CDS
TCTCTTGCTTCCGAGTAAGC+CGG 0.470159 1_4:-59397026 None:intergenic
CCGGCAGGACCAACAGCATC+AGG 0.471054 1_4:-59399736 None:intergenic
TGCAACTAATAAAACTTGAT+AGG 0.471234 1_4:+59400702 Msa0173920:three_prime_UTR
CTTGAGAAAGGGAATAAGGA+AGG 0.476247 1_4:+59393623 Msa0173920:CDS
TTGATTACAGGTGGGAATTG+AGG 0.477112 1_4:+59400236 Msa0173920:intron
TCCTCTTGTACTTAGAGCAC+AGG 0.478174 1_4:+59397920 Msa0173920:CDS
TGGGGAAGAGGTCAAGGGAA+TGG 0.478218 1_4:+59393432 Msa0173920:CDS
TCTGGGATCCCGGTGGTTGG+AGG 0.478508 1_4:+59393560 Msa0173920:CDS
AACAGAGATTACCTTGTGGC+AGG 0.479919 1_4:-59398586 None:intergenic
TGCGTCAGGCCGAGGCTGTG+TGG 0.480436 1_4:+59398111 Msa0173920:CDS
AACTGCAGTAGGAAGGTCTA+TGG 0.480847 1_4:+59400527 Msa0173920:CDS
TCCTCTTCTGCCACTATGAA+AGG 0.481801 1_4:-59399235 None:intergenic
CATATAGCAGCGGGAAAAGA+TGG 0.484670 1_4:+59399772 Msa0173920:CDS
TATCAGAGTGCAACATCAAA+TGG 0.485125 1_4:+59398323 Msa0173920:CDS
AAAGACAAGGCGCTTGTTGG+TGG 0.485410 1_4:+59399688 Msa0173920:CDS
AGGACATGTTTCACCGGCTG+TGG 0.490256 1_4:+59393718 Msa0173920:CDS
CTAGCTCTGTTGACTACCCT+TGG 0.491004 1_4:+59397159 Msa0173920:CDS
TGTTTCACCGGCTGTGGAAA+GGG 0.493285 1_4:+59393724 Msa0173920:CDS
AGTTCATCAGATGCATTGTC+AGG 0.497162 1_4:-59399658 None:intergenic
TAAGGCTAGTAGGGCTCTTG+TGG 0.497571 1_4:+59393874 Msa0173920:CDS
TGTTAGTCCAATTGCTGTAC+CGG 0.498218 1_4:+59398516 Msa0173920:CDS
GGAATTTGAATGATTGGAGA+TGG 0.498797 1_4:+59393453 Msa0173920:CDS
CACAAAGTTTACAGTTCCCT+CGG 0.498820 1_4:-59400485 None:intergenic
GATTTGCTAGATTGAGGACC+AGG 0.501170 1_4:+59399192 Msa0173920:intron
GTATCAGCTTTATTCTCCAA+TGG 0.501723 1_4:+59396858 Msa0173920:CDS
GTCAGAGAGGTGAGGTTGAA+AGG 0.503268 1_4:-59392973 None:intergenic
ATGATGACGAAGAAGAATTA+CGG 0.505958 1_4:-59392893 None:intergenic
TGGAGACCCCTGAGAACCAT+TGG 0.509467 1_4:-59396874 None:intergenic
TAACAGTTTCATCAAAGAGT+AGG 0.509576 1_4:-59399525 None:intergenic
TCCTTTCATAGTGGCAGAAG+AGG 0.510150 1_4:+59399234 Msa0173920:CDS
ACAAGTGTGGCAGGCAAGGA+TGG 0.510235 1_4:-59392936 None:intergenic
GAGAAGCTGTCGAAGACGCT+TGG 0.511016 1_4:+59395280 Msa0173920:CDS
AGGAGAGTGCTGGAAGATGA+TGG 0.511358 1_4:+59393656 Msa0173920:CDS
CTCAATATCAGTAGGACTGT+GGG 0.513581 1_4:-59398048 None:intergenic
TAGTTCTAGCGGAGAAGCCC+AGG 0.513750 1_4:+59397259 Msa0173920:CDS
GAGGAAGGAGATCTTGAGAA+AGG 0.514583 1_4:+59393611 Msa0173920:CDS
GGAGCATGAAGAAGACGTAT+TGG 0.515867 1_4:-59393588 None:intergenic
TAGCCGTGTGAATCCGGTGC+AGG 0.517976 1_4:+59393496 Msa0173920:CDS
GCGTCAGGCCGAGGCTGTGT+GGG 0.518427 1_4:+59398112 Msa0173920:CDS
TAAAGCCAAAAGTCAAGCTA+TGG 0.519399 1_4:+59399339 Msa0173920:CDS
TATATGAAGTGGTGTCAAAC+CGG 0.519627 1_4:-59399755 None:intergenic
TCACCACTGCACACCAATCA+TGG 0.519744 1_4:-59399489 None:intergenic
ATGTTTCACCGGCTGTGGAA+AGG 0.521156 1_4:+59393723 Msa0173920:CDS
TTTCTCAAGATCTCCTTCCT+CGG 0.522636 1_4:-59393609 None:intergenic
GAAACTGATCCAGATATTGA+AGG 0.522834 1_4:+59399304 Msa0173920:CDS
TTGGAGTTCGGAACAAGCTA+AGG 0.522976 1_4:+59400669 Msa0173920:CDS
TCGGAACATGTATAGAACTT+CGG 0.525195 1_4:-59400628 None:intergenic
GGCAACAAGTGTGGCAGGCA+AGG 0.527575 1_4:-59392940 None:intergenic
AAGAATGCCCGTGACAGTAC+AGG 0.527708 1_4:+59400264 Msa0173920:CDS
AGAGAATTTGTTGAGAGAAG+GGG 0.527845 1_4:+59396812 Msa0173920:CDS
GTTTCACTTGATTCTAGTAG+AGG 0.528154 1_4:-59399286 None:intergenic
GTGGCAGGCAAGGATGGAAA+CGG 0.528222 1_4:-59392930 None:intergenic
ATTTCTTGTAGAACTGCAGT+AGG 0.528560 1_4:+59400516 Msa0173920:CDS
AGGGTTAATTGTTTGTGTTG+AGG 0.528823 1_4:+59393297 Msa0173920:five_prime_UTR
GTGTGGAGCCTGTACTGTCA+CGG 0.530352 1_4:-59400272 None:intergenic
ACATGTTCCGACCTTTCAGA+TGG 0.530501 1_4:+59400640 Msa0173920:CDS
TGATGTTGTGTTATAACAGT+TGG 0.532386 1_4:-59396894 None:intergenic
GAAAGTGCTTGATACAATGT+AGG 0.533002 1_4:-59399562 None:intergenic
GCTTGGCTGGCCATAACAAA+CGG 0.533402 1_4:+59395297 Msa0173920:CDS
ACCTGTGCTCTAAGTACAAG+AGG 0.533970 1_4:-59397921 None:intergenic
AGATCGGCAACAAGTGTGGC+AGG 0.534219 1_4:-59392945 None:intergenic
ATTTCATTCATGAAATGGGC+TGG 0.535051 1_4:+59399362 Msa0173920:CDS
GTCTTCTTCACAGAGCTGTA+AGG 0.535241 1_4:+59399593 Msa0173920:CDS
GAATTTGAATGATTGGAGAT+GGG 0.536595 1_4:+59393454 Msa0173920:CDS
TTTCCCGCTGCTATATGAAG+TGG 0.537198 1_4:-59399766 None:intergenic
GATCCAGATATTGAAGGGAC+TGG 0.538378 1_4:+59399310 Msa0173920:CDS
TGTTCTGTACCTGTGACAAA+TGG 0.539622 1_4:+59398861 Msa0173920:CDS
TAGATCTCTTTCCATTAGAA+CGG 0.540024 1_4:+59399437 Msa0173920:CDS
CTATGGACATACTTGTACAA+TGG 0.540144 1_4:+59400850 Msa0173920:three_prime_UTR
GGGGTTCTTCAAGAAATTCA+GGG 0.541114 1_4:+59396832 Msa0173920:CDS
CTACTTACATGATAGAAAGA+TGG 0.541423 1_4:-59392797 None:intergenic
GAATTTCCACTTGTTTGAGG+TGG 0.542056 1_4:-59397209 None:intergenic
TTGTTTAGACCTGATGCTGT+TGG 0.542526 1_4:+59399727 Msa0173920:CDS
CGTAATCGCGCATAATCCTC+AGG 0.544188 1_4:-59400294 None:intergenic
ATATATGTTGACTCAGATGA+TGG 0.545000 1_4:+59397092 Msa0173920:CDS
AGGAAGGAGATCTTGAGAAA+GGG 0.547901 1_4:+59393612 Msa0173920:CDS
GTAGCAAGATTTGTAGAGAC+GGG 0.551066 1_4:-59397137 None:intergenic
TTGGACGAACCTCCAACCAC+CGG 0.551797 1_4:-59393569 None:intergenic
CTTCTCCGCTAGAACTAGAA+GGG 0.552259 1_4:-59397253 None:intergenic
TGAGAAAGGGAATAAGGAAG+GGG 0.552930 1_4:+59393625 Msa0173920:CDS
AATCCTCTTCCATTTGTCAC+AGG 0.553594 1_4:-59398870 None:intergenic
ACACCACTTCATATAGCAGC+GGG 0.553941 1_4:+59399763 Msa0173920:CDS
GATGCATTCTAAGGCTAGTA+GGG 0.556125 1_4:+59393865 Msa0173920:CDS
AATTGAGCTCTCTTTGATGC+CGG 0.556172 1_4:-59398535 None:intergenic
GTTAATAGATCCTGATCTGT+AGG 0.556745 1_4:-59396714 None:intergenic
TCTTCTTCATGCTCCGAGGA+AGG 0.558761 1_4:+59393596 Msa0173920:CDS
AGTAGCAAGATTTGTAGAGA+CGG 0.559291 1_4:-59397138 None:intergenic
TTGAATGATTGGAGATGGGA+TGG 0.559506 1_4:+59393458 Msa0173920:CDS
CTGAAGTTCATCAAGCTCCT+CGG 0.559955 1_4:-59398823 None:intergenic
AATTGTGAATTGTGATTATG+GGG 0.561310 1_4:+59393345 Msa0173920:exon
AAGGCTAGTAGGGCTCTTGT+GGG 0.562216 1_4:+59393875 Msa0173920:CDS
ACCTGATGCGCCCTGCCACA+AGG 0.562538 1_4:+59398575 Msa0173920:CDS
TATTTGGATATAATATTCAG+TGG 0.564159 1_4:+59400925 Msa0173920:three_prime_UTR
ATACTTCAAGAGTTCGATGA+AGG 0.564195 1_4:+59395254 Msa0173920:CDS
GTACTACTTTGAGCTCAGCT+AGG 0.565523 1_4:+59393069 Msa0173920:five_prime_UTR
CTTGTAGAACTGCAGTAGGA+AGG 0.568836 1_4:+59400520 Msa0173920:CDS
CAGCTTCTTTCCTTTCATAG+TGG 0.569410 1_4:+59399225 Msa0173920:CDS
TTCCATTAGAACGGTTCACA+TGG 0.572870 1_4:+59399446 Msa0173920:CDS
TGAAGTGGTGTCAAACCGGC+AGG 0.572947 1_4:-59399751 None:intergenic
CAGCATTTCAAACAGTCCCC+CGG 0.574192 1_4:+59397007 Msa0173920:CDS
GAGAATTTGTTGAGAGAAGG+GGG 0.576069 1_4:+59396813 Msa0173920:CDS
TCAGGCCGAGGCTGTGTGGG+AGG 0.577431 1_4:+59398115 Msa0173920:CDS
CCGTGTGAATCCGGTGCAGG+CGG 0.578551 1_4:+59393499 Msa0173920:CDS
TGTGGAGCCTGTACTGTCAC+GGG 0.578816 1_4:-59400271 None:intergenic
AGAAGCTGCTACTCAAACCC+TGG 0.580967 1_4:-59399210 None:intergenic
CCGGGATCCCAGACCCGAGT+GGG 0.582659 1_4:-59393550 None:intergenic
ATGTAGCTCTCAATATCAGT+AGG 0.583286 1_4:-59398056 None:intergenic
TGCAGATCTGAGTAGAGGTA+AGG 0.583887 1_4:+59393814 Msa0173920:CDS
CTATAATTGTTGCTTCGGAA+AGG 0.584009 1_4:-59398481 None:intergenic
TCTTGCTTCCGAGTAAGCCG+GGG 0.584021 1_4:-59397024 None:intergenic
TTGAGAAAGGGAATAAGGAA+GGG 0.585696 1_4:+59393624 Msa0173920:CDS
TCAAGTCCACCTCAAACAAG+TGG 0.586688 1_4:+59397203 Msa0173920:CDS
TGGGAGAGACAACGGTGTGA+TGG 0.587565 1_4:-59392839 None:intergenic
TGGGATGGGGAAGAGGTCAA+GGG 0.588075 1_4:+59393427 Msa0173920:CDS
ACAGAGATTACCTTGTGGCA+GGG 0.588689 1_4:-59398585 None:intergenic
CAGAGCATCCAGTACATCCT+CGG 0.589070 1_4:-59399797 None:intergenic
ACAAACACAGACCGCTGCTA+TGG 0.592403 1_4:-59400580 None:intergenic
CTCTATGGTGGCCATAGCAG+CGG 0.592561 1_4:+59400569 Msa0173920:CDS
GTACCTGTGACAAATGGAAG+AGG 0.592712 1_4:+59398867 Msa0173920:CDS
ATGATTCCCATCTGAAAGGT+CGG 0.593018 1_4:-59400647 None:intergenic
AGATATGAGTTGATGATCAG+AGG 0.595345 1_4:-59396973 None:intergenic
AAGTAGATCGGCAACAAGTG+TGG 0.596325 1_4:-59392949 None:intergenic
AAGCCAATTGAAATATAGGA+TGG 0.596851 1_4:+59399396 Msa0173920:CDS
TCCAATGATTCCCATCTGAA+AGG 0.600424 1_4:-59400651 None:intergenic
TCTTGCAGGACATGTTTCAC+CGG 0.602620 1_4:+59393712 Msa0173920:CDS
GCTAGAACTAGAAGGGGACT+GGG 0.602647 1_4:-59397246 None:intergenic
TGAGAATCTTGTTGTGTCCA+AGG 0.603103 1_4:-59397176 None:intergenic
ATTGAGAGCTACATACGCCC+TGG 0.604603 1_4:+59398065 Msa0173920:CDS
AAATGGAAGAGGATTTATTG+AGG 0.605184 1_4:+59398878 Msa0173920:CDS
CATGTTCCGACCTTTCAGAT+GGG 0.605353 1_4:+59400641 Msa0173920:CDS
ACAAATCAACAACTATGTAA+CGG 0.606335 1_4:-59393097 None:intergenic
TGGACGAACCTCCAACCACC+GGG 0.606579 1_4:-59393568 None:intergenic
AACACAAGGAGCAGCTCATG+TGG 0.607987 1_4:+59400362 Msa0173920:CDS
GACAATGCATCTGATGAACT+AGG 0.608146 1_4:+59399661 Msa0173920:CDS
TTCTTCAAGAAATTCAGGGA+TGG 0.609933 1_4:+59396836 Msa0173920:CDS
AAACTGATCCAGATATTGAA+GGG 0.611495 1_4:+59399305 Msa0173920:CDS
CAGTCCCCTTCTAGTTCTAG+CGG 0.612309 1_4:+59397248 Msa0173920:CDS
TACTTCCTCCCACACAGCCT+CGG 0.612916 1_4:-59398120 None:intergenic
TGAAGATGCTCATGAGTCAA+CGG 0.614117 1_4:+59398791 Msa0173920:CDS
GAGGATTATGCGCGATTACG+TGG 0.614195 1_4:+59400297 Msa0173920:CDS
ATTGCTCTTAATTGGAACCA+TGG 0.616881 1_4:+59393174 Msa0173920:five_prime_UTR
CTGGCCATAACAAACGGAGA+AGG 0.618872 1_4:+59395303 Msa0173920:CDS
TCACCGGCTGTGGAAAGGGA+CGG 0.619862 1_4:+59393728 Msa0173920:CDS
CAGGCGGAGAGTTTGCGAGT+GGG 0.622495 1_4:+59393515 Msa0173920:CDS
TACAGGTGGGAATTGAGGCA+TGG 0.622502 1_4:+59400241 Msa0173920:intron
GAGAGAGGTGTACGTCAGAG+AGG 0.623693 1_4:-59392986 None:intergenic
CCGCCTGCACCGGATTCACA+CGG 0.624536 1_4:-59393499 None:intergenic
GCAGGCGGAGAGTTTGCGAG+TGG 0.624882 1_4:+59393514 Msa0173920:CDS
TCTCAATATCAGTAGGACTG+TGG 0.625316 1_4:-59398049 None:intergenic
GCAAGTCAGAATGATGAACA+AGG 0.626908 1_4:+59396756 Msa0173920:CDS
ACCTGCAATGCTCTCTATGG+TGG 0.630335 1_4:+59400557 Msa0173920:CDS
TTGTGGGAAATGCAATGCAG+AGG 0.630557 1_4:+59393891 Msa0173920:CDS
GCTGAAGTAAGACGTAGCCG+AGG 0.633383 1_4:+59400468 Msa0173920:CDS
CTTCAACCTGACAAACAGCT+CGG 0.638676 1_4:-59393784 None:intergenic
ATGGTCAAAACAATACAACC+AGG 0.638951 1_4:-59398083 None:intergenic
GACACCACTTCATATAGCAG+CGG 0.639223 1_4:+59399762 Msa0173920:CDS
TGTTGACTCAGATGATGGAA+CGG 0.641750 1_4:+59397097 Msa0173920:CDS
AGGTTGAAAGGAAAGTAGAT+CGG 0.643080 1_4:-59392961 None:intergenic
TCTGACTAATGATCCTTGCA+TGG 0.643398 1_4:+59399816 Msa0173920:CDS
GATGGTTTGAATGATGAAGC+TGG 0.645206 1_4:+59393674 Msa0173920:CDS
AAATGACCGAGGTTTAGGAC+TGG 0.645870 1_4:+59400750 Msa0173920:three_prime_UTR
TATTCTCCAATGGTTCTCAG+GGG 0.647451 1_4:+59396868 Msa0173920:CDS
TTCTCCGCTAGAACTAGAAG+GGG 0.647976 1_4:-59397252 None:intergenic
TCGCGCATAATCCTCAGGTG+TGG 0.653531 1_4:-59400289 None:intergenic
AGCAGCGGTCTGTGTTTGTG+TGG 0.653598 1_4:+59400584 Msa0173920:CDS
GTTTGTCAGGTTGAAGACTG+TGG 0.653869 1_4:+59393791 Msa0173920:CDS
CTAGTAGAGGTTCAAGCACG+CGG 0.656034 1_4:-59399273 None:intergenic
ATTTGCTAGATTGAGGACCA+GGG 0.658771 1_4:+59399193 Msa0173920:intron
AAAGTGCTTGATACAATGTA+GGG 0.660121 1_4:-59399561 None:intergenic
ATCCAAATATTACAGTACGA+AGG 0.662139 1_4:-59400911 None:intergenic
CTGAAGTAAGACGTAGCCGA+GGG 0.663241 1_4:+59400469 Msa0173920:CDS
TGAACTAGGACCCAAAGACA+AGG 0.663671 1_4:+59399675 Msa0173920:CDS
AGCGGGAAAAGATGGTTCCG+AGG 0.663787 1_4:+59399780 Msa0173920:CDS
TACGTCTTCTTCATGCTCCG+AGG 0.664152 1_4:+59393592 Msa0173920:CDS
TGTGGTGCAGATCTGAGTAG+AGG 0.668323 1_4:+59393809 Msa0173920:CDS
CAGTACAGGCTCCACACCTG+AGG 0.669316 1_4:+59400278 Msa0173920:CDS
AGGTGTACGTCAGAGAGGTG+AGG 0.671365 1_4:-59392981 None:intergenic
ACAAGGAGCAGCTCATGTGG+TGG 0.675515 1_4:+59400365 Msa0173920:CDS
AGAGCACACGGACACAACCA+TGG 0.676729 1_4:-59393191 None:intergenic
GAGAATCTTGTTGTGTCCAA+GGG 0.677067 1_4:-59397175 None:intergenic
GTTCATAAACTAAATGACCG+AGG 0.680511 1_4:+59400739 Msa0173920:three_prime_UTR
ACCGGGATCCCAGACCCGAG+TGG 0.681118 1_4:-59393551 None:intergenic
CAAGTCAGAATGATGAACAA+GGG 0.681362 1_4:+59396757 Msa0173920:CDS
ACACAACCAGTCCTAAACCT+CGG 0.683008 1_4:-59400756 None:intergenic
ACTCGGGTCTGGGATCCCGG+TGG 0.689955 1_4:+59393553 Msa0173920:CDS
TGGTCAAAACAATACAACCA+GGG 0.689970 1_4:-59398082 None:intergenic
GGACCATGATTGGTGTGCAG+TGG 0.690358 1_4:+59399486 Msa0173920:CDS
CTTGCTTCCGAGTAAGCCGG+GGG 0.690508 1_4:-59397023 None:intergenic
TCGGAAGCAAGAGATAGCAG+TGG 0.695304 1_4:+59397035 Msa0173920:CDS
ATTGTGAATTGTGATTATGG+GGG 0.703425 1_4:+59393346 Msa0173920:exon
GTGAAGTGTTGAACTGAGAG+AGG 0.726800 1_4:-59393001 None:intergenic
GTCAACGGATCAATACTCCG+AGG 0.781576 1_4:+59398806 Msa0173920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAAGTATGATTTTTTTA+AGG + chr1_4:59394844-59394863 Msa0173920:intron 10.0%
!! AATACAAAATTATTGAATAA+AGG - chr1_4:59395127-59395146 None:intergenic 10.0%
!!! TTTTGTATTAATTTTTATGT+AGG + chr1_4:59395138-59395157 Msa0173920:intron 10.0%
!! AAAAATTAACTGTTAAATAA+CGG - chr1_4:59397831-59397850 None:intergenic 10.0%
!!! TTTATTGTTGTTTTTGTTTT+GGG - chr1_4:59392861-59392880 None:intergenic 15.0%
!!! TTTTATTGTTGTTTTTGTTT+TGG - chr1_4:59392862-59392881 None:intergenic 15.0%
!! TAAAAAATTAAAGGATAACA+AGG - chr1_4:59394494-59394513 None:intergenic 15.0%
!! TAAATAGTTAAGGATATAAT+AGG + chr1_4:59394727-59394746 Msa0173920:intron 15.0%
!!! AAGTTTTTTTTTTTTTTGAG+AGG - chr1_4:59395167-59395186 None:intergenic 15.0%
!! AATAAAAAAAAACCTATAAC+CGG - chr1_4:59395699-59395718 None:intergenic 15.0%
!!! TTTTTTTTATTGAGAAATGT+TGG + chr1_4:59395718-59395737 Msa0173920:intron 15.0%
!! AAATGTTGTCAATTATTATT+AGG - chr1_4:59395987-59396006 None:intergenic 15.0%
!! TAATAATAATTGACAACATT+TGG + chr1_4:59395986-59396005 Msa0173920:intron 15.0%
!! AATAATAATTGACAACATTT+GGG + chr1_4:59395987-59396006 Msa0173920:intron 15.0%
!! AAATAATCACCAATAATTAT+TGG - chr1_4:59397735-59397754 None:intergenic 15.0%
!!! AACATATGTATTTTTTTTTG+TGG + chr1_4:59398695-59398714 Msa0173920:intron 15.0%
!!! ACATATGTATTTTTTTTTGT+GGG + chr1_4:59398696-59398715 Msa0173920:intron 15.0%
!! AAAAAAATTAACAAAACACA+AGG + chr1_4:59400348-59400367 Msa0173920:CDS 15.0%
!!! TTGTATTTTAAGCTAAGTTT+AGG + chr1_4:59393277-59393296 Msa0173920:five_prime_UTR 20.0%
!!! TGTATTTTAAGCTAAGTTTA+GGG + chr1_4:59393278-59393297 Msa0173920:five_prime_UTR 20.0%
!! TTAATTGTGAATTGTGATTA+TGG + chr1_4:59393343-59393362 Msa0173920:exon 20.0%
!! TAATTGTGAATTGTGATTAT+GGG + chr1_4:59393344-59393363 Msa0173920:exon 20.0%
!!! GCTGAAAATTATCATTTTTA+TGG + chr1_4:59393380-59393399 Msa0173920:CDS 20.0%
!!! AATTATCATTTTTATGGTGT+TGG + chr1_4:59393386-59393405 Msa0173920:CDS 20.0%
!!! TTCAGATATTGATTACATTT+TGG - chr1_4:59394037-59394056 None:intergenic 20.0%
!! TGAATAATCAGTGTAAAATT+AGG + chr1_4:59394269-59394288 Msa0173920:intron 20.0%
!! GAATAATCAGTGTAAAATTA+GGG + chr1_4:59394270-59394289 Msa0173920:intron 20.0%
!! ATTAAAAAACGAAAGAGTTT+GGG - chr1_4:59394416-59394435 None:intergenic 20.0%
!! AATTAAAAAACGAAAGAGTT+TGG - chr1_4:59394417-59394436 None:intergenic 20.0%
!!! ATTTATAACCTGATTTTGAT+GGG + chr1_4:59394536-59394555 Msa0173920:intron 20.0%
!! CGCATATAAAATTAATTACA+TGG - chr1_4:59394618-59394637 None:intergenic 20.0%
!! TAAAAATCCATCATGATATT+AGG - chr1_4:59395096-59395115 None:intergenic 20.0%
!!! ATTAATATATAAGGTTGGTT+TGG - chr1_4:59395825-59395844 None:intergenic 20.0%
!!! CATTGATTAATATATAAGGT+TGG - chr1_4:59395830-59395849 None:intergenic 20.0%
!!! GCAACATTGATTAATATATA+AGG - chr1_4:59395834-59395853 None:intergenic 20.0%
!!! ACGGATTATTTTTATAACAA+CGG + chr1_4:59396517-59396536 Msa0173920:intron 20.0%
!! TTAAATTAATTATAGCTGAC+AGG + chr1_4:59396682-59396701 Msa0173920:intron 20.0%
!! AGTCAAATAATCTTAATCAT+GGG - chr1_4:59397375-59397394 None:intergenic 20.0%
!! AAGTCAAATAATCTTAATCA+TGG - chr1_4:59397376-59397395 None:intergenic 20.0%
!!! AGATTATTTGACTTCATTTA+TGG + chr1_4:59397382-59397401 Msa0173920:intron 20.0%
!!! CCTATTTCATTTTACTATTT+TGG - chr1_4:59397683-59397702 None:intergenic 20.0%
!! CCAAAATAGTAAAATGAAAT+AGG + chr1_4:59397680-59397699 Msa0173920:intron 20.0%
!! AACTATCAACCTTTATATAA+TGG + chr1_4:59398159-59398178 Msa0173920:intron 20.0%
!!! CTTTCTTACTACTTTTTTTA+TGG + chr1_4:59398427-59398446 Msa0173920:intron 20.0%
!! TGTAGCATAAAAGTAAAAAT+CGG - chr1_4:59399007-59399026 None:intergenic 20.0%
!! TTTGATGAAACTGTTAATAA+AGG + chr1_4:59399532-59399551 Msa0173920:CDS 20.0%
!!! TTTATTTTGAGTCATCATAT+CGG + chr1_4:59399944-59399963 Msa0173920:intron 20.0%
!!! GAATTGCTCATAAATTTTAT+TGG + chr1_4:59400020-59400039 Msa0173920:intron 20.0%
!! TACATATTATTATCCTTCTA+TGG + chr1_4:59400813-59400832 Msa0173920:three_prime_UTR 20.0%
!!! TTGTTAAAACTCAATTTGTT+AGG + chr1_4:59400886-59400905 Msa0173920:three_prime_UTR 20.0%
!! TATTTGGATATAATATTCAG+TGG + chr1_4:59400925-59400944 Msa0173920:three_prime_UTR 20.0%
!! ATGGTCATAATTAAAAAAAC+AGG - chr1_4:59400955-59400974 None:intergenic 20.0%
! ACAAATCAACAACTATGTAA+CGG - chr1_4:59393100-59393119 None:intergenic 25.0%
!!! TAGTTGTTGATTTGTGAAAT+TGG + chr1_4:59393105-59393124 Msa0173920:five_prime_UTR 25.0%
! AATTGTGAATTGTGATTATG+GGG + chr1_4:59393345-59393364 Msa0173920:exon 25.0%
!!! ATATTGATTACATTTTGGAG+CGG - chr1_4:59394032-59394051 None:intergenic 25.0%
!! CATTTATAACCTGATTTTGA+TGG + chr1_4:59394535-59394554 Msa0173920:intron 25.0%
! ACAAAATTGCCCTTAATAAA+TGG + chr1_4:59394661-59394680 Msa0173920:intron 25.0%
! TTTGCCATACCATTTATTAA+GGG - chr1_4:59394673-59394692 None:intergenic 25.0%
!! TTTTGCCATACCATTTATTA+AGG - chr1_4:59394674-59394693 None:intergenic 25.0%
! GAGAGAGTAATAAATAGTTA+AGG + chr1_4:59394717-59394736 Msa0173920:intron 25.0%
! TTGTAAAGCGACATATAATT+TGG + chr1_4:59394776-59394795 Msa0173920:intron 25.0%
! TGTAAAGCGACATATAATTT+GGG + chr1_4:59394777-59394796 Msa0173920:intron 25.0%
! GAGTATTTATTGTATCTTGT+TGG + chr1_4:59394918-59394937 Msa0173920:intron 25.0%
!! AGTTTGCTTAGTTATAAATC+TGG + chr1_4:59395570-59395589 Msa0173920:intron 25.0%
!!! TTTCCAATAGTGTATTTTTG+GGG - chr1_4:59395915-59395934 None:intergenic 25.0%
!! GTTTCCAATAGTGTATTTTT+GGG - chr1_4:59395916-59395935 None:intergenic 25.0%
! TGCTTGTATATATGACAATT+AGG + chr1_4:59396137-59396156 Msa0173920:intron 25.0%
!!! GTCTTCATTTTTTATTATGC+TGG + chr1_4:59396253-59396272 Msa0173920:intron 25.0%
! TTATTATGCTGGCATTAAAT+TGG + chr1_4:59396264-59396283 Msa0173920:intron 25.0%
!!! CGGATTATTTTTATAACAAC+GGG + chr1_4:59396518-59396537 Msa0173920:intron 25.0%
!!! GGATTATTTTTATAACAACG+GGG + chr1_4:59396519-59396538 Msa0173920:intron 25.0%
! CACTTATTTATTGCATCATA+TGG + chr1_4:59396542-59396561 Msa0173920:intron 25.0%
! ATATGGCAATAATGACATTT+GGG + chr1_4:59396559-59396578 Msa0173920:intron 25.0%
! ATAACATAGATAGCAATCAA+AGG - chr1_4:59396623-59396642 None:intergenic 25.0%
! ATCTATTAACTCATCTTCTA+AGG + chr1_4:59396727-59396746 Msa0173920:CDS 25.0%
!!! TTTGCTGTACTATTTTGAAT+TGG + chr1_4:59397290-59397309 Msa0173920:intron 25.0%
! GTCAAATAATCTTAATCATG+GGG - chr1_4:59397374-59397393 None:intergenic 25.0%
! GAGTTTGATCAAACATTAAA+CGG - chr1_4:59397650-59397669 None:intergenic 25.0%
!!! TTTCATTTTACTATTTTGGC+AGG - chr1_4:59397679-59397698 None:intergenic 25.0%
! GTAAAATGAAATAGGATCTT+TGG + chr1_4:59397688-59397707 Msa0173920:intron 25.0%
! CAGAATACACCAATAATTAT+TGG + chr1_4:59397723-59397742 Msa0173920:intron 25.0%
! CGAAGAGTTTAAAAACAATT+CGG - chr1_4:59397881-59397900 None:intergenic 25.0%
!!! CGAATTGTTTTTAAACTCTT+CGG + chr1_4:59397879-59397898 Msa0173920:CDS 25.0%
!! TTTGAAATTTAATCACATCG+AGG + chr1_4:59397995-59398014 Msa0173920:intron 25.0%
! TTGAAATTTAATCACATCGA+GGG + chr1_4:59397996-59398015 Msa0173920:intron 25.0%
!!! TAAAGGTTGATAGTTTTAGA+AGG - chr1_4:59398154-59398173 None:intergenic 25.0%
! TATCAACCTTTATATAATGG+CGG + chr1_4:59398162-59398181 Msa0173920:intron 25.0%
! AAATAACCGCCATTATATAA+AGG - chr1_4:59398171-59398190 None:intergenic 25.0%
!!! TTTTGCTATAATTGTTGCTT+CGG - chr1_4:59398489-59398508 None:intergenic 25.0%
! GCAACAATTATAGCAAAATT+TGG + chr1_4:59398491-59398510 Msa0173920:CDS 25.0%
!!! TGCAAATTTTTTAAGTGACT+TGG + chr1_4:59398654-59398673 Msa0173920:intron 25.0%
! TATGTTCAAAAAAATCCAGT+AGG - chr1_4:59398681-59398700 None:intergenic 25.0%
! TAAACAGAAAAAAGTAGTCA+GGG + chr1_4:59398926-59398945 Msa0173920:intron 25.0%
! GTAGCATAAAAGTAAAAATC+GGG - chr1_4:59399006-59399025 None:intergenic 25.0%
!!! TTTTTTGATTTGCTAGATTG+AGG + chr1_4:59399186-59399205 Msa0173920:intron 25.0%
! TATGGATTTCATTCATGAAA+TGG + chr1_4:59399357-59399376 Msa0173920:CDS 25.0%
! ATGGATTTCATTCATGAAAT+GGG + chr1_4:59399358-59399377 Msa0173920:CDS 25.0%
! TAACCATCCTATATTTCAAT+TGG - chr1_4:59399402-59399421 None:intergenic 25.0%
!!! ATCGACTTCTTCTAATATTT+TGG + chr1_4:59399876-59399895 Msa0173920:intron 25.0%
! ATTACCAAAAGCCAAAATAA+GGG - chr1_4:59400169-59400188 None:intergenic 25.0%
!!! AGTAACACAATTTTGATTAC+AGG + chr1_4:59400224-59400243 Msa0173920:intron 25.0%
! CTAAGTGAATGTAAGTATAA+TGG - chr1_4:59400323-59400342 None:intergenic 25.0%
! TGCAACTAATAAAACTTGAT+AGG + chr1_4:59400702-59400721 Msa0173920:three_prime_UTR 25.0%
!!! ACAAATTGAGTTTTAACAAG+AGG - chr1_4:59400885-59400904 None:intergenic 25.0%
CTACTTACATGATAGAAAGA+TGG - chr1_4:59392800-59392819 None:intergenic 30.0%
TGTGATGGTATATTCTGTTA+TGG - chr1_4:59392827-59392846 None:intergenic 30.0%
! ATGATGACGAAGAAGAATTA+CGG - chr1_4:59392896-59392915 None:intergenic 30.0%
TACTGTTGTACTTGATTATG+TGG + chr1_4:59393151-59393170 Msa0173920:five_prime_UTR 30.0%
! TTATGTGGATTGCTCTTAAT+TGG + chr1_4:59393166-59393185 Msa0173920:five_prime_UTR 30.0%
ATTGTGAATTGTGATTATGG+GGG + chr1_4:59393346-59393365 Msa0173920:exon 30.0%
!! TATCATTTTTATGGTGTTGG+TGG + chr1_4:59393389-59393408 Msa0173920:CDS 30.0%
GAATTTGAATGATTGGAGAT+GGG + chr1_4:59393454-59393473 Msa0173920:CDS 30.0%
AACAGAAAGCAATCAATAAG+AGG - chr1_4:59393948-59393967 None:intergenic 30.0%
!!! ATTGCTTTCTGTTTTTGCTT+TGG + chr1_4:59393955-59393974 Msa0173920:intron 30.0%
!! GTTGATAGTTATGTGTGTAT+AGG + chr1_4:59393977-59393996 Msa0173920:intron 30.0%
TTATATAGAGAGATCTCACA+TGG - chr1_4:59394197-59394216 None:intergenic 30.0%
AAAATTGGGTTTGTCTAACT+GGG + chr1_4:59394327-59394346 Msa0173920:intron 30.0%
ATTAAAGGATAACAAGGACT+TGG - chr1_4:59394488-59394507 None:intergenic 30.0%
ATTGCCCTTAATAAATGGTA+TGG + chr1_4:59394666-59394685 Msa0173920:intron 30.0%
TTTCCAAAGCGACATATAAT+TGG + chr1_4:59394810-59394829 Msa0173920:intron 30.0%
TTCCAAAGCGACATATAATT+GGG + chr1_4:59394811-59394830 Msa0173920:intron 30.0%
TAAAATATGCTACAGCAGTA+TGG - chr1_4:59395002-59395021 None:intergenic 30.0%
! ATACTGCTGTAGCATATTTT+AGG + chr1_4:59395001-59395020 Msa0173920:intron 30.0%
!! GCTAACTTGTTAATAACAGA+TGG - chr1_4:59395044-59395063 None:intergenic 30.0%
AATACTGCCTAATATCATGA+TGG + chr1_4:59395086-59395105 Msa0173920:intron 30.0%
!! ATCGCAGTTGTATTTTTAAC+TGG + chr1_4:59395595-59395614 Msa0173920:intron 30.0%
GTATGTTAGTGTTATGTTGT+GGG + chr1_4:59395740-59395759 Msa0173920:intron 30.0%
!! AATATATAAGGTTGGTTTGG+TGG - chr1_4:59395822-59395841 None:intergenic 30.0%
!!! TTCCAATAGTGTATTTTTGG+GGG - chr1_4:59395914-59395933 None:intergenic 30.0%
! CGTTTCCAATAGTGTATTTT+TGG - chr1_4:59395917-59395936 None:intergenic 30.0%
!!! CTTTCTGTTTTTTCTAAGGT+GGG - chr1_4:59396022-59396041 None:intergenic 30.0%
TATGGGGGTTACAATATTAA+TGG + chr1_4:59396321-59396340 Msa0173920:intron 30.0%
ATGGGGGTTACAATATTAAT+GGG + chr1_4:59396322-59396341 Msa0173920:intron 30.0%
! GAAACATGCGTATTCTAAAA+AGG - chr1_4:59396403-59396422 None:intergenic 30.0%
!! TTGACATGCAATCGATTTTT+AGG + chr1_4:59396428-59396447 Msa0173920:intron 30.0%
CAAGCTTATGATTTATGAGA+CGG + chr1_4:59396498-59396517 Msa0173920:intron 30.0%
CATATGGCAATAATGACATT+TGG + chr1_4:59396558-59396577 Msa0173920:intron 30.0%
!! AAGAGAATTTGTTGAGAGAA+GGG + chr1_4:59396811-59396830 Msa0173920:CDS 30.0%
TGATGTTGTGTTATAACAGT+TGG - chr1_4:59396897-59396916 None:intergenic 30.0%
GAATCAAATGCAACAAGAAA+TGG + chr1_4:59396929-59396948 Msa0173920:CDS 30.0%
!! ATATATGTTGACTCAGATGA+TGG + chr1_4:59397092-59397111 Msa0173920:CDS 30.0%
TTGACTTCATTTATGGATAG+AGG + chr1_4:59397389-59397408 Msa0173920:intron 30.0%
AAATGAAATAGGATCTTTGG+TGG + chr1_4:59397691-59397710 Msa0173920:intron 30.0%
AGTACAAGAGGAAATTCATT+TGG - chr1_4:59397912-59397931 None:intergenic 30.0%
! CAAATGGCATTCATTTTCAA+CGG + chr1_4:59398339-59398358 Msa0173920:CDS 30.0%
!!! TACTACTTTTTTTATGGTGC+AGG + chr1_4:59398433-59398452 Msa0173920:intron 30.0%
! AGAGCTCAATTTTCTGTTAA+AGG + chr1_4:59398547-59398566 Msa0173920:CDS 30.0%
ATTTAACTACCAACATGCAA+AGG - chr1_4:59398630-59398649 None:intergenic 30.0%
!! TGCTTTAGAAGGAAAATATC+TGG + chr1_4:59398764-59398783 Msa0173920:CDS 30.0%
AAATGGAAGAGGATTTATTG+AGG + chr1_4:59398878-59398897 Msa0173920:CDS 30.0%
GTAAACAGAAAAAAGTAGTC+AGG + chr1_4:59398925-59398944 Msa0173920:intron 30.0%
AAACAGAAAAAAGTAGTCAG+GGG + chr1_4:59398927-59398946 Msa0173920:intron 30.0%
CTAGTTATTACTCAATGAGA+GGG + chr1_4:59398957-59398976 Msa0173920:intron 30.0%
TAGTTATTACTCAATGAGAG+GGG + chr1_4:59398958-59398977 Msa0173920:intron 30.0%
TTATGCTACATTTCAACACA+CGG + chr1_4:59399017-59399036 Msa0173920:intron 30.0%
TAAAAGACAGCTTATGAGTT+AGG - chr1_4:59399069-59399088 None:intergenic 30.0%
CAGTAAAAATAATGACACAC+TGG - chr1_4:59399111-59399130 None:intergenic 30.0%
AAACTGATCCAGATATTGAA+GGG + chr1_4:59399305-59399324 Msa0173920:CDS 30.0%
ACAGAAGCCAATTGAAATAT+AGG + chr1_4:59399392-59399411 Msa0173920:CDS 30.0%
AAGCCAATTGAAATATAGGA+TGG + chr1_4:59399396-59399415 Msa0173920:CDS 30.0%
TAGATCTCTTTCCATTAGAA+CGG + chr1_4:59399437-59399456 Msa0173920:CDS 30.0%
TAACAGTTTCATCAAAGAGT+AGG - chr1_4:59399528-59399547 None:intergenic 30.0%
! AAAGTGCTTGATACAATGTA+GGG - chr1_4:59399564-59399583 None:intergenic 30.0%
TATCAAGCACTTTCAGAAAT+GGG + chr1_4:59399571-59399590 Msa0173920:CDS 30.0%
! AGTAGAAATTTTACCATGCA+AGG - chr1_4:59399832-59399851 None:intergenic 30.0%
TCTTGTAGTGATATAAGTCA+AGG - chr1_4:59399856-59399875 None:intergenic 30.0%
TTACCAAAAGCCAAAATAAG+GGG - chr1_4:59400168-59400187 None:intergenic 30.0%
GATTACCAAAAGCCAAAATA+AGG - chr1_4:59400170-59400189 None:intergenic 30.0%
!!! AACACAATTTTGATTACAGG+TGG + chr1_4:59400227-59400246 Msa0173920:intron 30.0%
!!! ACACAATTTTGATTACAGGT+GGG + chr1_4:59400228-59400247 Msa0173920:intron 30.0%
AAAACTTGATAGGTCATGTA+TGG + chr1_4:59400712-59400731 Msa0173920:three_prime_UTR 30.0%
AGGATAATAATGTCCATAGA+AGG - chr1_4:59400829-59400848 None:intergenic 30.0%
TGGACATTATTATCCTTCTA+TGG + chr1_4:59400833-59400852 Msa0173920:three_prime_UTR 30.0%
ATCCTTCGTACTGTAATATT+TGG + chr1_4:59400909-59400928 Msa0173920:three_prime_UTR 30.0%
ATCCAAATATTACAGTACGA+AGG - chr1_4:59400914-59400933 None:intergenic 30.0%
!!! TTTTGTTTTGGGAGAGACAA+CGG - chr1_4:59392850-59392869 None:intergenic 35.0%
AGGTTGAAAGGAAAGTAGAT+CGG - chr1_4:59392964-59392983 None:intergenic 35.0%
ATTGCTCTTAATTGGAACCA+TGG + chr1_4:59393174-59393193 Msa0173920:five_prime_UTR 35.0%
! AACAATCCAAAAAGAGCACA+CGG - chr1_4:59393206-59393225 None:intergenic 35.0%
! TGTGCTCTTTTTGGATTGTT+GGG + chr1_4:59393206-59393225 Msa0173920:five_prime_UTR 35.0%
AGGGTTAATTGTTTGTGTTG+AGG + chr1_4:59393297-59393316 Msa0173920:five_prime_UTR 35.0%
!! GTGGTTCATCTGATTTTAGT+GGG + chr1_4:59393408-59393427 Msa0173920:CDS 35.0%
!! TTCATCTGATTTTAGTGGGA+TGG + chr1_4:59393412-59393431 Msa0173920:CDS 35.0%
!! TCATCTGATTTTAGTGGGAT+GGG + chr1_4:59393413-59393432 Msa0173920:CDS 35.0%
GGGAATGGAATTTGAATGAT+TGG + chr1_4:59393447-59393466 Msa0173920:CDS 35.0%
GGAATTTGAATGATTGGAGA+TGG + chr1_4:59393453-59393472 Msa0173920:CDS 35.0%
AGATCTTGAGAAAGGGAATA+AGG + chr1_4:59393619-59393638 Msa0173920:CDS 35.0%
TTGAGAAAGGGAATAAGGAA+GGG + chr1_4:59393624-59393643 Msa0173920:CDS 35.0%
AGTTTGTGAGATGCATTCTA+AGG + chr1_4:59393856-59393875 Msa0173920:CDS 35.0%
CTGAAAATCTATGTTGCTGA+TGG + chr1_4:59394052-59394071 Msa0173920:intron 35.0%
CAAAATTGGGTTTGTCTAAC+TGG + chr1_4:59394326-59394345 Msa0173920:intron 35.0%
!! TAACCTGATTTTGATGGGAA+AGG + chr1_4:59394541-59394560 Msa0173920:intron 35.0%
! TCCCAAATTATCTGACGTTT+TGG + chr1_4:59394592-59394611 Msa0173920:intron 35.0%
GCCAAAACGTCAGATAATTT+GGG - chr1_4:59394596-59394615 None:intergenic 35.0%
AAAGCGACATATAATTGGGA+CGG + chr1_4:59394815-59394834 Msa0173920:intron 35.0%
!!! GCTGTAGCATATTTTAGGTT+TGG + chr1_4:59395006-59395025 Msa0173920:intron 35.0%
!!! ATATTTTAGGTTTGGCGCTA+TGG + chr1_4:59395014-59395033 Msa0173920:intron 35.0%
!!! TATTTTAGGTTTGGCGCTAT+GGG + chr1_4:59395015-59395034 Msa0173920:intron 35.0%
AGTATGTGAAACCTGTTGAT+GGG - chr1_4:59395239-59395258 None:intergenic 35.0%
AAGTATGTGAAACCTGTTGA+TGG - chr1_4:59395240-59395259 None:intergenic 35.0%
ATACTTCAAGAGTTCGATGA+AGG + chr1_4:59395254-59395273 Msa0173920:CDS 35.0%
!! TTTTCCTTCTCCGTTTGTTA+TGG - chr1_4:59395310-59395329 None:intergenic 35.0%
AATCAAGAAGCTGTTCCTAA+TGG + chr1_4:59395332-59395351 Msa0173920:CDS 35.0%
! TCATTTGTTGGACTTCCATT+AGG - chr1_4:59395350-59395369 None:intergenic 35.0%
CTAGTCTGATCATCATTTGT+TGG - chr1_4:59395362-59395381 None:intergenic 35.0%
CATTTCAAACCAATTCCTCT+AGG - chr1_4:59395478-59395497 None:intergenic 35.0%
!! AGAGGAATTGGTTTGAAATG+AGG + chr1_4:59395478-59395497 Msa0173920:intron 35.0%
AGACAAACTACTATACCAAC+AGG - chr1_4:59395660-59395679 None:intergenic 35.0%
! AGTTTGTCTGTGTTTTCACA+TGG + chr1_4:59395671-59395690 Msa0173920:intron 35.0%
GGTATGTTAGTGTTATGTTG+TGG + chr1_4:59395739-59395758 Msa0173920:intron 35.0%
!!! TTTTCTAAGGTGGGACTTAA+AGG - chr1_4:59396013-59396032 None:intergenic 35.0%
!!! CCTTTCTGTTTTTTCTAAGG+TGG - chr1_4:59396023-59396042 None:intergenic 35.0%
CCACCTTAGAAAAAACAGAA+AGG + chr1_4:59396020-59396039 Msa0173920:intron 35.0%
!!! GTGCCTTTCTGTTTTTTCTA+AGG - chr1_4:59396026-59396045 None:intergenic 35.0%
CAATTAGGCATAAGACACAA+AGG + chr1_4:59396152-59396171 Msa0173920:intron 35.0%
AAGACACAAAGGAACTTTGA+TGG + chr1_4:59396163-59396182 Msa0173920:intron 35.0%
AGACACAAAGGAACTTTGAT+GGG + chr1_4:59396164-59396183 Msa0173920:intron 35.0%
ATGGGAGCTTATGTTGAAAA+TGG + chr1_4:59396340-59396359 Msa0173920:intron 35.0%
! CTATGTTATGAGTTTTGCTG+AGG + chr1_4:59396634-59396653 Msa0173920:intron 35.0%
! AGTTTTGCTGAGGTTTTCTT+TGG + chr1_4:59396644-59396663 Msa0173920:intron 35.0%
GTTAATAGATCCTGATCTGT+AGG - chr1_4:59396717-59396736 None:intergenic 35.0%
CAAGTCAGAATGATGAACAA+GGG + chr1_4:59396757-59396776 Msa0173920:CDS 35.0%
!! CAAGAGAATTTGTTGAGAGA+AGG + chr1_4:59396810-59396829 Msa0173920:CDS 35.0%
!! AGAGAATTTGTTGAGAGAAG+GGG + chr1_4:59396812-59396831 Msa0173920:CDS 35.0%
TTCTTCAAGAAATTCAGGGA+TGG + chr1_4:59396836-59396855 Msa0173920:CDS 35.0%
!! GTATCAGCTTTATTCTCCAA+TGG + chr1_4:59396858-59396877 Msa0173920:CDS 35.0%
TTTATTCTCCAATGGTTCTC+AGG + chr1_4:59396866-59396885 Msa0173920:CDS 35.0%
TTATTCTCCAATGGTTCTCA+GGG + chr1_4:59396867-59396886 Msa0173920:CDS 35.0%
!! AGATATGAGTTGATGATCAG+AGG - chr1_4:59396976-59396995 None:intergenic 35.0%
AGTAGCAAGATTTGTAGAGA+CGG - chr1_4:59397141-59397160 None:intergenic 35.0%
TCTGAATTTCCACTTGTTTG+AGG - chr1_4:59397215-59397234 None:intergenic 35.0%
TTATGGATAGAGGATGTTTC+TGG + chr1_4:59397399-59397418 Msa0173920:intron 35.0%
!! TTGCTGGTTCTTTAACTTAC+CGG + chr1_4:59397449-59397468 Msa0173920:intron 35.0%
! GTGGTGTTTTACATGTTTTG+TGG + chr1_4:59397479-59397498 Msa0173920:intron 35.0%
GCATAGAAATCATGCAAACA+GGG - chr1_4:59397567-59397586 None:intergenic 35.0%
AGCATAGAAATCATGCAAAC+AGG - chr1_4:59397568-59397587 None:intergenic 35.0%
TATTTCCCCATTTCTAACCA+TGG + chr1_4:59397750-59397769 Msa0173920:intron 35.0%
AAACAGCCATGGTTAGAAAT+GGG - chr1_4:59397759-59397778 None:intergenic 35.0%
TAAACAGCCATGGTTAGAAA+TGG - chr1_4:59397760-59397779 None:intergenic 35.0%
ATTTCTAACCATGGCTGTTT+AGG + chr1_4:59397759-59397778 Msa0173920:intron 35.0%
TCAATTGGCAGATTCTAGAT+TGG + chr1_4:59398021-59398040 Msa0173920:intron 35.0%
ATGTAGCTCTCAATATCAGT+AGG - chr1_4:59398059-59398078 None:intergenic 35.0%
TGGTCAAAACAATACAACCA+GGG - chr1_4:59398085-59398104 None:intergenic 35.0%
ATGGTCAAAACAATACAACC+AGG - chr1_4:59398086-59398105 None:intergenic 35.0%
! ATGTCTCAGATGATACGTTT+TGG + chr1_4:59398283-59398302 Msa0173920:CDS 35.0%
!!! GATGATACGTTTTGGAAAAC+TGG + chr1_4:59398291-59398310 Msa0173920:CDS 35.0%
!!! ATACGTTTTGGAAAACTGGA+TGG + chr1_4:59398295-59398314 Msa0173920:CDS 35.0%
!!! TACGTTTTGGAAAACTGGAT+GGG + chr1_4:59398296-59398315 Msa0173920:CDS 35.0%
TATCAGAGTGCAACATCAAA+TGG + chr1_4:59398323-59398342 Msa0173920:CDS 35.0%
TGTCTCTGCTGTTATTCTTA+TGG + chr1_4:59398372-59398391 Msa0173920:intron 35.0%
! CTATAATTGTTGCTTCGGAA+AGG - chr1_4:59398484-59398503 None:intergenic 35.0%
TAACCTAAGGACAAGTTTGA+GGG - chr1_4:59398739-59398758 None:intergenic 35.0%
TTAACCTAAGGACAAGTTTG+AGG - chr1_4:59398740-59398759 None:intergenic 35.0%
CTAAAGCACACATTAACCTA+AGG - chr1_4:59398752-59398771 None:intergenic 35.0%
! AGGTTAATGTGTGCTTTAGA+AGG + chr1_4:59398753-59398772 Msa0173920:intron 35.0%
CAGGTACAGAACATGAAAAT+TGG - chr1_4:59398854-59398873 None:intergenic 35.0%
GCTAGTTATTACTCAATGAG+AGG + chr1_4:59398956-59398975 Msa0173920:intron 35.0%
AGTTATTACTCAATGAGAGG+GGG + chr1_4:59398959-59398978 Msa0173920:intron 35.0%
GTTTCACTTGATTCTAGTAG+AGG - chr1_4:59399289-59399308 None:intergenic 35.0%
GAAACTGATCCAGATATTGA+AGG + chr1_4:59399304-59399323 Msa0173920:CDS 35.0%
TAAAGCCAAAAGTCAAGCTA+TGG + chr1_4:59399339-59399358 Msa0173920:CDS 35.0%
! GAAATCCATAGCTTGACTTT+TGG - chr1_4:59399347-59399366 None:intergenic 35.0%
ATTTCATTCATGAAATGGGC+TGG + chr1_4:59399362-59399381 Msa0173920:CDS 35.0%
! ATGGCTTATGGAGTTTTCAA+TGG + chr1_4:59399465-59399484 Msa0173920:CDS 35.0%
! AGTTTTCAATGGACCATGAT+TGG + chr1_4:59399476-59399495 Msa0173920:CDS 35.0%
!! GAAAGTGCTTGATACAATGT+AGG - chr1_4:59399565-59399584 None:intergenic 35.0%
GTATCAAGCACTTTCAGAAA+TGG + chr1_4:59399570-59399589 Msa0173920:CDS 35.0%
GAGAAATAGCAAACAGTTAG+TGG + chr1_4:59399615-59399634 Msa0173920:CDS 35.0%
! TATATGAAGTGGTGTCAAAC+CGG - chr1_4:59399758-59399777 None:intergenic 35.0%
GAATTGTACCAGTTAAAAGC+AGG - chr1_4:59399973-59399992 None:intergenic 35.0%
TCACTAGCAGTATATAAGTG+TGG - chr1_4:59399995-59400014 None:intergenic 35.0%
ACAATATCAGTGACCAAAGT+AGG - chr1_4:59400076-59400095 None:intergenic 35.0%
CTTTGGTCACTGATATTGTT+TGG + chr1_4:59400077-59400096 Msa0173920:intron 35.0%
TACCAAAAGCCAAAATAAGG+GGG - chr1_4:59400167-59400186 None:intergenic 35.0%
! TGAATGACTCATTTTGCTTC+GGG - chr1_4:59400428-59400447 None:intergenic 35.0%
! GTGAATGACTCATTTTGCTT+CGG - chr1_4:59400429-59400448 None:intergenic 35.0%
! TCATTCACTAGCTTAGAGAT+TGG + chr1_4:59400441-59400460 Msa0173920:CDS 35.0%
ATTTCTTGTAGAACTGCAGT+AGG + chr1_4:59400516-59400535 Msa0173920:CDS 35.0%
TCGGAACATGTATAGAACTT+CGG - chr1_4:59400631-59400650 None:intergenic 35.0%
GTTCATAAACTAAATGACCG+AGG + chr1_4:59400739-59400758 Msa0173920:three_prime_UTR 35.0%
AAACTAAATGACCGAGGTTT+AGG + chr1_4:59400745-59400764 Msa0173920:three_prime_UTR 35.0%
CTGGTTGTGTTTGTTTGTAT+TGG + chr1_4:59400769-59400788 Msa0173920:three_prime_UTR 35.0%
TGTACAAGTATGTCCATAGA+AGG - chr1_4:59400849-59400868 None:intergenic 35.0%
CTATGGACATACTTGTACAA+TGG + chr1_4:59400850-59400869 Msa0173920:three_prime_UTR 35.0%
! GTGTGCTCTTTTTGGATTGT+TGG + chr1_4:59393205-59393224 Msa0173920:five_prime_UTR 40.0%
! GTGCTCTTTTTGGATTGTTG+GGG + chr1_4:59393207-59393226 Msa0173920:five_prime_UTR 40.0%
GGATTGTTGGGGATGAATTA+AGG + chr1_4:59393218-59393237 Msa0173920:five_prime_UTR 40.0%
GAATTGTGATTATGGGGGAA+AGG + chr1_4:59393351-59393370 Msa0173920:exon 40.0%
! GGTGGTTCATCTGATTTTAG+TGG + chr1_4:59393407-59393426 Msa0173920:CDS 40.0%
!! CATCTGATTTTAGTGGGATG+GGG + chr1_4:59393414-59393433 Msa0173920:CDS 40.0%
TTGAATGATTGGAGATGGGA+TGG + chr1_4:59393458-59393477 Msa0173920:CDS 40.0%
TTTCTCAAGATCTCCTTCCT+CGG - chr1_4:59393612-59393631 None:intergenic 40.0%
AGGAAGGAGATCTTGAGAAA+GGG + chr1_4:59393612-59393631 Msa0173920:CDS 40.0%
CTTGAGAAAGGGAATAAGGA+AGG + chr1_4:59393623-59393642 Msa0173920:CDS 40.0%
TGAGAAAGGGAATAAGGAAG+GGG + chr1_4:59393625-59393644 Msa0173920:CDS 40.0%
ATAAGGAAGGGGATAGGAAA+AGG + chr1_4:59393636-59393655 Msa0173920:CDS 40.0%
GATGGTTTGAATGATGAAGC+TGG + chr1_4:59393674-59393693 Msa0173920:CDS 40.0%
GCACTTAGCTTAAATCTTGC+AGG + chr1_4:59393698-59393717 Msa0173920:CDS 40.0%
!! AGATGCATTCTAAGGCTAGT+AGG + chr1_4:59393864-59393883 Msa0173920:CDS 40.0%
!! GATGCATTCTAAGGCTAGTA+GGG + chr1_4:59393865-59393884 Msa0173920:CDS 40.0%
!! GGTTTTGTCAACAGTGTAGT+AGG + chr1_4:59393912-59393931 Msa0173920:CDS 40.0%
! AGCGAGCATAGTTTGTATGT+CGG - chr1_4:59394247-59394266 None:intergenic 40.0%
! ACAAACCCAATTTTGCACCA+GGG - chr1_4:59394321-59394340 None:intergenic 40.0%
TAATCCTCCTCGGGAAAAAT+GGG - chr1_4:59394374-59394393 None:intergenic 40.0%
ATAATCCTCCTCGGGAAAAA+TGG - chr1_4:59394375-59394394 None:intergenic 40.0%
! TTTTTCCCGAGGAGGATTAT+TGG + chr1_4:59394375-59394394 Msa0173920:intron 40.0%
TGTCCTTTCCCATCAAAATC+AGG - chr1_4:59394547-59394566 None:intergenic 40.0%
! GTCAGATAATTTGGGACAGA+GGG - chr1_4:59394588-59394607 None:intergenic 40.0%
GGCCAAAACGTCAGATAATT+TGG - chr1_4:59394597-59394616 None:intergenic 40.0%
! GTCCCAATTATATGTCGCTT+TGG - chr1_4:59394816-59394835 None:intergenic 40.0%
AATATGCTACAGCAGTATGG+CGG - chr1_4:59394999-59395018 None:intergenic 40.0%
! CATTCTTTTACCCCATCAAC+AGG + chr1_4:59395225-59395244 Msa0173920:intron 40.0%
GTATGTGAAACCTGTTGATG+GGG - chr1_4:59395238-59395257 None:intergenic 40.0%
TCTTTGCAACTATAGCCTAG+AGG + chr1_4:59395460-59395479 Msa0173920:intron 40.0%
CAACTATAGCCTAGAGGAAT+TGG + chr1_4:59395466-59395485 Msa0173920:intron 40.0%
CCAAAGGATCAGTTATGTAC+AGG - chr1_4:59395535-59395554 None:intergenic 40.0%
CCTGTACATAACTGATCCTT+TGG + chr1_4:59395532-59395551 Msa0173920:intron 40.0%
TAACTTCCTGTAGCTACCAA+AGG - chr1_4:59395551-59395570 None:intergenic 40.0%
TGGCAAGACATGCTAACTAT+GGG + chr1_4:59395615-59395634 Msa0173920:intron 40.0%
! TCTGTGTTTTCACATGGAAC+CGG + chr1_4:59395677-59395696 Msa0173920:intron 40.0%
TTTCACATGGAACCGGTTAT+AGG + chr1_4:59395684-59395703 Msa0173920:intron 40.0%
GTTAGTGTTATGTTGTGGGT+AGG + chr1_4:59395744-59395763 Msa0173920:intron 40.0%
AGTTAAGGAGTGGAGTGATA+AGG - chr1_4:59395787-59395806 None:intergenic 40.0%
!!! TGTATTTTTGGGGGCTTTGA+GGG - chr1_4:59395905-59395924 None:intergenic 40.0%
AGCCCCCAAAAATACACTAT+TGG + chr1_4:59395909-59395928 Msa0173920:intron 40.0%
ATCGAGAGTCTAAGCAAGAT+CGG - chr1_4:59396092-59396111 None:intergenic 40.0%
TGGTCTGAGAAATCAACAAC+TGG + chr1_4:59396284-59396303 Msa0173920:intron 40.0%
! TGGCCTCTAAAGAAGGATAT+GGG + chr1_4:59396304-59396323 Msa0173920:intron 40.0%
! TTGCTGAGGTTTTCTTTGGA+TGG + chr1_4:59396648-59396667 Msa0173920:intron 40.0%
! TGCTGAGGTTTTCTTTGGAT+GGG + chr1_4:59396649-59396668 Msa0173920:intron 40.0%
GCAAGTCAGAATGATGAACA+AGG + chr1_4:59396756-59396775 Msa0173920:CDS 40.0%
!! GAGAATTTGTTGAGAGAAGG+GGG + chr1_4:59396813-59396832 Msa0173920:CDS 40.0%
GGGGTTCTTCAAGAAATTCA+GGG + chr1_4:59396832-59396851 Msa0173920:CDS 40.0%
TATTCTCCAATGGTTCTCAG+GGG + chr1_4:59396868-59396887 Msa0173920:CDS 40.0%
!! TGTTGACTCAGATGATGGAA+CGG + chr1_4:59397097-59397116 Msa0173920:CDS 40.0%
GTAGCAAGATTTGTAGAGAC+GGG - chr1_4:59397140-59397159 None:intergenic 40.0%
! GAGAATCTTGTTGTGTCCAA+GGG - chr1_4:59397178-59397197 None:intergenic 40.0%
! TGAGAATCTTGTTGTGTCCA+AGG - chr1_4:59397179-59397198 None:intergenic 40.0%
GAATTTCCACTTGTTTGAGG+TGG - chr1_4:59397212-59397231 None:intergenic 40.0%
TACAGCAAACAAACAGACCT+GGG - chr1_4:59397279-59397298 None:intergenic 40.0%
GTACCATCTTTGCACTCAAA+TGG + chr1_4:59397333-59397352 Msa0173920:intron 40.0%
CTTCCATTTGAGTGCAAAGA+TGG - chr1_4:59397339-59397358 None:intergenic 40.0%
!! TGTTTCTGGTAACCCTCATA+AGG + chr1_4:59397413-59397432 Msa0173920:intron 40.0%
CATCACACATTGCCTTATGA+GGG - chr1_4:59397428-59397447 None:intergenic 40.0%
ACATCACACATTGCCTTATG+AGG - chr1_4:59397429-59397448 None:intergenic 40.0%
TTAACTTACCGGTGAAGTTG+TGG + chr1_4:59397460-59397479 Msa0173920:intron 40.0%
GTAAAACACCACAACTTCAC+CGG - chr1_4:59397471-59397490 None:intergenic 40.0%
TACAGTCACGACAAAAAGGT+GGG - chr1_4:59397507-59397526 None:intergenic 40.0%
TTACAGTCACGACAAAAAGG+TGG - chr1_4:59397508-59397527 None:intergenic 40.0%
TCGTTACAGTCACGACAAAA+AGG - chr1_4:59397511-59397530 None:intergenic 40.0%
CATGCAAACAGGGAAATTGA+AGG - chr1_4:59397557-59397576 None:intergenic 40.0%
AACAGCCATGGTTAGAAATG+GGG - chr1_4:59397758-59397777 None:intergenic 40.0%
! AAAGCATTCCTAAACAGCCA+TGG - chr1_4:59397770-59397789 None:intergenic 40.0%
ATCACATCGAGGGTTTCAAT+TGG + chr1_4:59398006-59398025 Msa0173920:intron 40.0%
CTCAATATCAGTAGGACTGT+GGG - chr1_4:59398051-59398070 None:intergenic 40.0%
TCTCAATATCAGTAGGACTG+TGG - chr1_4:59398052-59398071 None:intergenic 40.0%
TTTGACCATTTATCTGCGTC+AGG + chr1_4:59398097-59398116 Msa0173920:CDS 40.0%
TTCCAGTTTGATTAAGCTGC+TGG + chr1_4:59398260-59398279 Msa0173920:CDS 40.0%
ATCCAGCAGCTTAATCAAAC+TGG - chr1_4:59398265-59398284 None:intergenic 40.0%
TGTTAGTCCAATTGCTGTAC+CGG + chr1_4:59398516-59398535 Msa0173920:CDS 40.0%
AATTGAGCTCTCTTTGATGC+CGG - chr1_4:59398538-59398557 None:intergenic 40.0%
AAGCAACAGAGATTACCTTG+TGG - chr1_4:59398593-59398612 None:intergenic 40.0%
CTTGTCAATCCTTTGCATGT+TGG + chr1_4:59398618-59398637 Msa0173920:intron 40.0%
! TTTAAGTGACTTGGACCTAC+TGG + chr1_4:59398663-59398682 Msa0173920:intron 40.0%
TGAAGATGCTCATGAGTCAA+CGG + chr1_4:59398791-59398810 Msa0173920:CDS 40.0%
TGTTCTGTACCTGTGACAAA+TGG + chr1_4:59398861-59398880 Msa0173920:CDS 40.0%
AATCCTCTTCCATTTGTCAC+AGG - chr1_4:59398873-59398892 None:intergenic 40.0%
GTTATTACTCAATGAGAGGG+GGG + chr1_4:59398960-59398979 Msa0173920:intron 40.0%
! ATTTGCTAGATTGAGGACCA+GGG + chr1_4:59399193-59399212 Msa0173920:intron 40.0%
CAGCTTCTTTCCTTTCATAG+TGG + chr1_4:59399225-59399244 Msa0173920:CDS 40.0%
TTTCCAGTCCCTTCAATATC+TGG - chr1_4:59399316-59399335 None:intergenic 40.0%
! AGGATGGTTAACTTGAACTC+TGG + chr1_4:59399412-59399431 Msa0173920:CDS 40.0%
TTCCATTAGAACGGTTCACA+TGG + chr1_4:59399446-59399465 Msa0173920:CDS 40.0%
AGTTCATCAGATGCATTGTC+AGG - chr1_4:59399661-59399680 None:intergenic 40.0%
GACAATGCATCTGATGAACT+AGG + chr1_4:59399661-59399680 Msa0173920:CDS 40.0%
TTGTTTAGACCTGATGCTGT+TGG + chr1_4:59399727-59399746 Msa0173920:CDS 40.0%
TCTGACTAATGATCCTTGCA+TGG + chr1_4:59399816-59399835 Msa0173920:CDS 40.0%
GTACCAACCAATCATATAGC+TGG + chr1_4:59400042-59400061 Msa0173920:intron 40.0%
CAACCAGCTATATGATTGGT+TGG - chr1_4:59400048-59400067 None:intergenic 40.0%
AGGTCAACCAGCTATATGAT+TGG - chr1_4:59400052-59400071 None:intergenic 40.0%
TCAGCTATTCACACAAGACA+CGG - chr1_4:59400130-59400149 None:intergenic 40.0%
ACCAAAAGCCAAAATAAGGG+GGG - chr1_4:59400166-59400185 None:intergenic 40.0%
TTGATTACAGGTGGGAATTG+AGG + chr1_4:59400236-59400255 Msa0173920:intron 40.0%
! GAATGACTCATTTTGCTTCG+GGG - chr1_4:59400427-59400446 None:intergenic 40.0%
CACAAAGTTTACAGTTCCCT+CGG - chr1_4:59400488-59400507 None:intergenic 40.0%
CGGAACATGTATAGAACTTC+GGG - chr1_4:59400630-59400649 None:intergenic 40.0%
ATGATTCCCATCTGAAAGGT+CGG - chr1_4:59400650-59400669 None:intergenic 40.0%
ACCTTTCAGATGGGAATCAT+TGG + chr1_4:59400650-59400669 Msa0173920:CDS 40.0%
TCCAATGATTCCCATCTGAA+AGG - chr1_4:59400654-59400673 None:intergenic 40.0%
AGATGGGAATCATTGGAGTT+CGG + chr1_4:59400657-59400676 Msa0173920:CDS 40.0%
AAGTAGATCGGCAACAAGTG+TGG - chr1_4:59392952-59392971 None:intergenic 45.0%
!! GTGAAGTGTTGAACTGAGAG+AGG - chr1_4:59393004-59393023 None:intergenic 45.0%
GTACTACTTTGAGCTCAGCT+AGG + chr1_4:59393069-59393088 Msa0173920:five_prime_UTR 45.0%
! TTGTGTCCGTGTGCTCTTTT+TGG + chr1_4:59393197-59393216 Msa0173920:five_prime_UTR 45.0%
TGTGATTATGGGGGAAAGGT+TGG + chr1_4:59393355-59393374 Msa0173920:exon 45.0%
GTGATTATGGGGGAAAGGTT+GGG + chr1_4:59393356-59393375 Msa0173920:exon 45.0%
!! ATTTTAGTGGGATGGGGAAG+AGG + chr1_4:59393420-59393439 Msa0173920:CDS 45.0%
TATAGCTAGCCGTGTGAATC+CGG + chr1_4:59393490-59393509 Msa0173920:CDS 45.0%
! GGACAACAGTTTTTCCCACT+CGG + chr1_4:59393536-59393555 Msa0173920:CDS 45.0%
! GACAACAGTTTTTCCCACTC+GGG + chr1_4:59393537-59393556 Msa0173920:CDS 45.0%
GGAGCATGAAGAAGACGTAT+TGG - chr1_4:59393591-59393610 None:intergenic 45.0%
GAGGAAGGAGATCTTGAGAA+AGG + chr1_4:59393611-59393630 Msa0173920:CDS 45.0%
AAGGGAATAAGGAAGGGGAT+AGG + chr1_4:59393630-59393649 Msa0173920:CDS 45.0%
TCTTGCAGGACATGTTTCAC+CGG + chr1_4:59393712-59393731 Msa0173920:CDS 45.0%
GGAAAAAAGAGCAGAGTAGC+TGG + chr1_4:59393749-59393768 Msa0173920:CDS 45.0%
AAAAAGAGCAGAGTAGCTGG+AGG + chr1_4:59393752-59393771 Msa0173920:CDS 45.0%
CTTCAACCTGACAAACAGCT+CGG - chr1_4:59393787-59393806 None:intergenic 45.0%
!! GTTTGTCAGGTTGAAGACTG+TGG + chr1_4:59393791-59393810 Msa0173920:CDS 45.0%
TGCAGATCTGAGTAGAGGTA+AGG + chr1_4:59393814-59393833 Msa0173920:CDS 45.0%
TTGTGGGAAATGCAATGCAG+AGG + chr1_4:59393891-59393910 Msa0173920:CDS 45.0%
ACTACACTATTCCGCTATCG+CGG - chr1_4:59394080-59394099 None:intergenic 45.0%
!! CGATAGCGGAATAGTGTAGT+GGG + chr1_4:59394080-59394099 Msa0173920:intron 45.0%
TGGGTCAGGGTTTGAAGAAA+GGG + chr1_4:59394099-59394118 Msa0173920:intron 45.0%
CATGGCAAACTTTCGACCAA+TGG - chr1_4:59394179-59394198 None:intergenic 45.0%
! GACAAACCCAATTTTGCACC+AGG - chr1_4:59394322-59394341 None:intergenic 45.0%
AACGAAAGAGTTTGGGCTGT+GGG - chr1_4:59394409-59394428 None:intergenic 45.0%
AAACGAAAGAGTTTGGGCTG+TGG - chr1_4:59394410-59394429 None:intergenic 45.0%
! CGTCAGATAATTTGGGACAG+AGG - chr1_4:59394589-59394608 None:intergenic 45.0%
CGACATATAATTGGGACGGA+GGG + chr1_4:59394819-59394838 Msa0173920:intron 45.0%
!! ACTGTTAGTCTTCGCAACAG+CGG + chr1_4:59394961-59394980 Msa0173920:intron 45.0%
! ACTGATCCTTTGGTAGCTAC+AGG + chr1_4:59395542-59395561 Msa0173920:intron 45.0%
CTGGCAAGACATGCTAACTA+TGG + chr1_4:59395614-59395633 Msa0173920:intron 45.0%
AGACATGCTAACTATGGGAG+AGG + chr1_4:59395620-59395639 Msa0173920:intron 45.0%
GTTTCGTAAGTTGCACCTGT+TGG + chr1_4:59395642-59395661 Msa0173920:intron 45.0%
TGGAGTGATAAGGAGGTTGA+GGG - chr1_4:59395777-59395796 None:intergenic 45.0%
TAAGGAGTGGAGTGATAAGG+AGG - chr1_4:59395784-59395803 None:intergenic 45.0%
!! TAAGGTTGGTTTGGTGGTTG+AGG - chr1_4:59395816-59395835 None:intergenic 45.0%
CAAGATCATGAGTTGCCTTG+TGG + chr1_4:59395853-59395872 Msa0173920:intron 45.0%
!!! TATTTTTGGGGGCTTTGAGG+GGG - chr1_4:59395903-59395922 None:intergenic 45.0%
!!! GTATTTTTGGGGGCTTTGAG+GGG - chr1_4:59395904-59395923 None:intergenic 45.0%
!!! GTGTATTTTTGGGGGCTTTG+AGG - chr1_4:59395906-59395925 None:intergenic 45.0%
CACTATTGGAAACGTGCTAC+CGG + chr1_4:59395923-59395942 Msa0173920:intron 45.0%
ACTATTGGAAACGTGCTACC+GGG + chr1_4:59395924-59395943 Msa0173920:intron 45.0%
!! CCTAAAATGCGGCTTTTTCC+CGG - chr1_4:59395945-59395964 None:intergenic 45.0%
! CGGGAAAAAGCCGCATTTTA+GGG + chr1_4:59395943-59395962 Msa0173920:intron 45.0%
!! GAAAAAGCCGCATTTTAGGG+AGG + chr1_4:59395946-59395965 Msa0173920:intron 45.0%
TCGAGAGTCTAAGCAAGATC+GGG - chr1_4:59396091-59396110 None:intergenic 45.0%
! CAACAACTGGCCTCTAAAGA+AGG + chr1_4:59396297-59396316 Msa0173920:intron 45.0%
! CTGGCCTCTAAAGAAGGATA+TGG + chr1_4:59396303-59396322 Msa0173920:intron 45.0%
! GGCCTCTAAAGAAGGATATG+GGG + chr1_4:59396305-59396324 Msa0173920:intron 45.0%
! GCCTCTAAAGAAGGATATGG+GGG + chr1_4:59396306-59396325 Msa0173920:intron 45.0%
ACCCCCATATCCTTCTTTAG+AGG - chr1_4:59396310-59396329 None:intergenic 45.0%
GGGGGTTCTTCAAGAAATTC+AGG + chr1_4:59396831-59396850 Msa0173920:CDS 45.0%
TCAAGTCCACCTCAAACAAG+TGG + chr1_4:59397203-59397222 Msa0173920:CDS 45.0%
TTCTCCGCTAGAACTAGAAG+GGG - chr1_4:59397255-59397274 None:intergenic 45.0%
CTTCTCCGCTAGAACTAGAA+GGG - chr1_4:59397256-59397275 None:intergenic 45.0%
GTACAGCAAACAAACAGACC+TGG - chr1_4:59397280-59397299 None:intergenic 45.0%
AGGCAATGTGTGATGTTTGC+TGG + chr1_4:59397433-59397452 Msa0173920:intron 45.0%
GTAACGACCAACAAGCAACA+TGG + chr1_4:59397524-59397543 Msa0173920:intron 45.0%
ACATTAAACGGAGCAAGTGC+TGG - chr1_4:59397638-59397657 None:intergenic 45.0%
TCCTCTTGTACTTAGAGCAC+AGG + chr1_4:59397920-59397939 Msa0173920:CDS 45.0%
! ACCTGTGCTCTAAGTACAAG+AGG - chr1_4:59397924-59397943 None:intergenic 45.0%
!! CGGTTATTTCTGCTAGCGTA+CGG + chr1_4:59398182-59398201 Msa0173920:intron 45.0%
CAGTCATGTCGTGTAAGATG+AGG - chr1_4:59398212-59398231 None:intergenic 45.0%
TTTGATGCCGGTACAGCAAT+TGG - chr1_4:59398526-59398545 None:intergenic 45.0%
ACAGAGATTACCTTGTGGCA+GGG - chr1_4:59398588-59398607 None:intergenic 45.0%
AACAGAGATTACCTTGTGGC+AGG - chr1_4:59398589-59398608 None:intergenic 45.0%
TGACCCTCAAACTTGTCCTT+AGG + chr1_4:59398733-59398752 Msa0173920:intron 45.0%
CTGAAGTTCATCAAGCTCCT+CGG - chr1_4:59398826-59398845 None:intergenic 45.0%
GTACCTGTGACAAATGGAAG+AGG + chr1_4:59398867-59398886 Msa0173920:CDS 45.0%
!! GATTTGCTAGATTGAGGACC+AGG + chr1_4:59399192-59399211 Msa0173920:intron 45.0%
TCCTTTCATAGTGGCAGAAG+AGG + chr1_4:59399234-59399253 Msa0173920:CDS 45.0%
TCCTCTTCTGCCACTATGAA+AGG - chr1_4:59399238-59399257 None:intergenic 45.0%
GATCCAGATATTGAAGGGAC+TGG + chr1_4:59399310-59399329 Msa0173920:CDS 45.0%
AGCCATGTGAACCGTTCTAA+TGG - chr1_4:59399451-59399470 None:intergenic 45.0%
AGAACGGTTCACATGGCTTA+TGG + chr1_4:59399453-59399472 Msa0173920:CDS 45.0%
GTCTTCTTCACAGAGCTGTA+AGG + chr1_4:59399593-59399612 Msa0173920:CDS 45.0%
TGAACTAGGACCCAAAGACA+AGG + chr1_4:59399675-59399694 Msa0173920:CDS 45.0%
GACACCACTTCATATAGCAG+CGG + chr1_4:59399762-59399781 Msa0173920:CDS 45.0%
ACACCACTTCATATAGCAGC+GGG + chr1_4:59399763-59399782 Msa0173920:CDS 45.0%
TTTCCCGCTGCTATATGAAG+TGG - chr1_4:59399769-59399788 None:intergenic 45.0%
CATATAGCAGCGGGAAAAGA+TGG + chr1_4:59399772-59399791 Msa0173920:CDS 45.0%
!! ATCGGAGTCCTGCTTTTAAC+TGG + chr1_4:59399962-59399981 Msa0173920:intron 45.0%
TATCAGTGACCAAAGTAGGC+AGG - chr1_4:59400072-59400091 None:intergenic 45.0%
TTACTGATGCAGAGCTGCTA+AGG - chr1_4:59400209-59400228 None:intergenic 45.0%
TTGCTCTCTGTCGTATTGCT+GGG - chr1_4:59400399-59400418 None:intergenic 45.0%
ATTGCTCTCTGTCGTATTGC+TGG - chr1_4:59400400-59400419 None:intergenic 45.0%
CTTGTAGAACTGCAGTAGGA+AGG + chr1_4:59400520-59400539 Msa0173920:CDS 45.0%
AACTGCAGTAGGAAGGTCTA+TGG + chr1_4:59400527-59400546 Msa0173920:CDS 45.0%
ACATGTTCCGACCTTTCAGA+TGG + chr1_4:59400640-59400659 Msa0173920:CDS 45.0%
CATGTTCCGACCTTTCAGAT+GGG + chr1_4:59400641-59400660 Msa0173920:CDS 45.0%
TTGGAGTTCGGAACAAGCTA+AGG + chr1_4:59400669-59400688 Msa0173920:CDS 45.0%
! AAATGACCGAGGTTTAGGAC+TGG + chr1_4:59400750-59400769 Msa0173920:three_prime_UTR 45.0%
ACACAACCAGTCCTAAACCT+CGG - chr1_4:59400759-59400778 None:intergenic 45.0%
!! AATTAGAATTAAAAAATTAA+AGG - chr1_4:59394503-59394522 None:intergenic 5.0%
GTCAGAGAGGTGAGGTTGAA+AGG - chr1_4:59392976-59392995 None:intergenic 50.0%
! AGTTTTTCCCACTCGGGTCT+GGG + chr1_4:59393543-59393562 Msa0173920:CDS 50.0%
TACGTCTTCTTCATGCTCCG+AGG + chr1_4:59393592-59393611 Msa0173920:CDS 50.0%
TCTTCTTCATGCTCCGAGGA+AGG + chr1_4:59393596-59393615 Msa0173920:CDS 50.0%
! GGATAGGAAAAGGAGAGTGC+TGG + chr1_4:59393646-59393665 Msa0173920:CDS 50.0%
!! AGGAGAGTGCTGGAAGATGA+TGG + chr1_4:59393656-59393675 Msa0173920:CDS 50.0%
! ATGTTTCACCGGCTGTGGAA+AGG + chr1_4:59393723-59393742 Msa0173920:CDS 50.0%
! TGTTTCACCGGCTGTGGAAA+GGG + chr1_4:59393724-59393743 Msa0173920:CDS 50.0%
TTCGAACCGAGCTGTTTGTC+AGG + chr1_4:59393778-59393797 Msa0173920:CDS 50.0%
TGTGGTGCAGATCTGAGTAG+AGG + chr1_4:59393809-59393828 Msa0173920:CDS 50.0%
TAAGGCTAGTAGGGCTCTTG+TGG + chr1_4:59393874-59393893 Msa0173920:CDS 50.0%
AAGGCTAGTAGGGCTCTTGT+GGG + chr1_4:59393875-59393894 Msa0173920:CDS 50.0%
!! GCGATAGCGGAATAGTGTAG+TGG + chr1_4:59394079-59394098 Msa0173920:intron 50.0%
!! CGGAATAGTGTAGTGGGTCA+GGG + chr1_4:59394086-59394105 Msa0173920:intron 50.0%
GTGGGTCAGGGTTTGAAGAA+AGG + chr1_4:59394098-59394117 Msa0173920:intron 50.0%
TTCGACCAATGGCACATTGC+AGG - chr1_4:59394168-59394187 None:intergenic 50.0%
! ATTTTGCACCAGGGATGCGT+AGG - chr1_4:59394312-59394331 None:intergenic 50.0%
ACGCATCCCTGGTGCAAAAT+TGG + chr1_4:59394312-59394331 Msa0173920:intron 50.0%
CGCATCCCTGGTGCAAAATT+GGG + chr1_4:59394313-59394332 Msa0173920:intron 50.0%
GGAGAGGAACTGCACATGTT+TGG - chr1_4:59394353-59394372 None:intergenic 50.0%
!! TTCCTCTCCCATTTTTCCCG+AGG + chr1_4:59394364-59394383 Msa0173920:intron 50.0%
TGAGGCCAATAATCCTCCTC+GGG - chr1_4:59394383-59394402 None:intergenic 50.0%
GTGAGGCCAATAATCCTCCT+CGG - chr1_4:59394384-59394403 None:intergenic 50.0%
GCGACATATAATTGGGACGG+AGG + chr1_4:59394818-59394837 Msa0173920:intron 50.0%
TCTTCGCAACAGCGGTTATC+CGG + chr1_4:59394969-59394988 Msa0173920:intron 50.0%
! GCTTGGCTGGCCATAACAAA+CGG + chr1_4:59395297-59395316 Msa0173920:CDS 50.0%
CTGGCCATAACAAACGGAGA+AGG + chr1_4:59395303-59395322 Msa0173920:CDS 50.0%
GTGGAGTGATAAGGAGGTTG+AGG - chr1_4:59395778-59395797 None:intergenic 50.0%
TGGTTGAGGCGGAGAAGTTA+AGG - chr1_4:59395802-59395821 None:intergenic 50.0%
!!! ATTTTTGGGGGCTTTGAGGG+GGG - chr1_4:59395902-59395921 None:intergenic 50.0%
! CCGGGAAAAAGCCGCATTTT+AGG + chr1_4:59395942-59395961 Msa0173920:intron 50.0%
!! AAAGCCGCATTTTAGGGAGG+CGG + chr1_4:59395949-59395968 Msa0173920:intron 50.0%
CGGGAGAGGGTTGAAAGATT+GGG - chr1_4:59396072-59396091 None:intergenic 50.0%
TCGGGAGAGGGTTGAAAGAT+TGG - chr1_4:59396073-59396092 None:intergenic 50.0%
GTCTAAGCAAGATCGGGAGA+GGG - chr1_4:59396085-59396104 None:intergenic 50.0%
AGTCTAAGCAAGATCGGGAG+AGG - chr1_4:59396086-59396105 None:intergenic 50.0%
GTCAGATCAGCCTACAGATC+AGG + chr1_4:59396704-59396723 Msa0173920:CDS 50.0%
! GGGGGACTGTTTGAAATGCT+GGG - chr1_4:59397008-59397027 None:intergenic 50.0%
CAGCATTTCAAACAGTCCCC+CGG + chr1_4:59397007-59397026 Msa0173920:CDS 50.0%
TCTCTTGCTTCCGAGTAAGC+CGG - chr1_4:59397029-59397048 None:intergenic 50.0%
TCGGAAGCAAGAGATAGCAG+TGG + chr1_4:59397035-59397054 Msa0173920:CDS 50.0%
!! CTAGCTCTGTTGACTACCCT+TGG + chr1_4:59397159-59397178 Msa0173920:CDS 50.0%
GCTAGAACTAGAAGGGGACT+GGG - chr1_4:59397249-59397268 None:intergenic 50.0%
!! CAGTCCCCTTCTAGTTCTAG+CGG + chr1_4:59397248-59397267 Msa0173920:CDS 50.0%
GCTTCTCCGCTAGAACTAGA+AGG - chr1_4:59397257-59397276 None:intergenic 50.0%
ACCAACAAGCAACATGGCTC+AGG + chr1_4:59397530-59397549 Msa0173920:intron 50.0%
CCAACAAGCAACATGGCTCA+GGG + chr1_4:59397531-59397550 Msa0173920:intron 50.0%
ATTGAGAGCTACATACGCCC+TGG + chr1_4:59398065-59398084 Msa0173920:CDS 50.0%
GTCAACGGATCAATACTCCG+AGG + chr1_4:59398806-59398825 Msa0173920:CDS 50.0%
AGAAGCTGCTACTCAAACCC+TGG - chr1_4:59399213-59399232 None:intergenic 50.0%
CTAGTAGAGGTTCAAGCACG+CGG - chr1_4:59399276-59399295 None:intergenic 50.0%
TCACCACTGCACACCAATCA+TGG - chr1_4:59399492-59399511 None:intergenic 50.0%
CCAACAAGCGCCTTGTCTTT+GGG - chr1_4:59399688-59399707 None:intergenic 50.0%
ACCAACAAGCGCCTTGTCTT+TGG - chr1_4:59399689-59399708 None:intergenic 50.0%
! AAAGACAAGGCGCTTGTTGG+TGG + chr1_4:59399688-59399707 Msa0173920:CDS 50.0%
AGATGGTTCCGAGGATGTAC+TGG + chr1_4:59399789-59399808 Msa0173920:CDS 50.0%
! CAGAGCATCCAGTACATCCT+CGG - chr1_4:59399800-59399819 None:intergenic 50.0%
AAGCCAAAATAAGGGGGGCT+GGG - chr1_4:59400161-59400180 None:intergenic 50.0%
AAAGCCAAAATAAGGGGGGC+TGG - chr1_4:59400162-59400181 None:intergenic 50.0%
!!! GCCCCCCTTATTTTGGCTTT+TGG + chr1_4:59400162-59400181 Msa0173920:intron 50.0%
TACAGGTGGGAATTGAGGCA+TGG + chr1_4:59400241-59400260 Msa0173920:intron 50.0%
AAGAATGCCCGTGACAGTAC+AGG + chr1_4:59400264-59400283 Msa0173920:CDS 50.0%
CGTAATCGCGCATAATCCTC+AGG - chr1_4:59400297-59400316 None:intergenic 50.0%
GAGGATTATGCGCGATTACG+TGG + chr1_4:59400297-59400316 Msa0173920:CDS 50.0%
AACACAAGGAGCAGCTCATG+TGG + chr1_4:59400362-59400381 Msa0173920:CDS 50.0%
CTGAAGTAAGACGTAGCCGA+GGG + chr1_4:59400469-59400488 Msa0173920:CDS 50.0%
CAGACCTGCAATGCTCTCTA+TGG + chr1_4:59400554-59400573 Msa0173920:CDS 50.0%
ACCTGCAATGCTCTCTATGG+TGG + chr1_4:59400557-59400576 Msa0173920:CDS 50.0%
ACAAACACAGACCGCTGCTA+TGG - chr1_4:59400583-59400602 None:intergenic 50.0%
TGGGAGAGACAACGGTGTGA+TGG - chr1_4:59392842-59392861 None:intergenic 55.0%
GTGGCAGGCAAGGATGGAAA+CGG - chr1_4:59392933-59392952 None:intergenic 55.0%
ACAAGTGTGGCAGGCAAGGA+TGG - chr1_4:59392939-59392958 None:intergenic 55.0%
AGATCGGCAACAAGTGTGGC+AGG - chr1_4:59392948-59392967 None:intergenic 55.0%
AGGTGTACGTCAGAGAGGTG+AGG - chr1_4:59392984-59393003 None:intergenic 55.0%
! GAGAGAGGTGTACGTCAGAG+AGG - chr1_4:59392989-59393008 None:intergenic 55.0%
AGAGCACACGGACACAACCA+TGG - chr1_4:59393194-59393213 None:intergenic 55.0%
TGGGATGGGGAAGAGGTCAA+GGG + chr1_4:59393427-59393446 Msa0173920:CDS 55.0%
TGGGGAAGAGGTCAAGGGAA+TGG + chr1_4:59393432-59393451 Msa0173920:CDS 55.0%
! CAGTTTTTCCCACTCGGGTC+TGG + chr1_4:59393542-59393561 Msa0173920:CDS 55.0%
TTGGACGAACCTCCAACCAC+CGG - chr1_4:59393572-59393591 None:intergenic 55.0%
! AGGACATGTTTCACCGGCTG+TGG + chr1_4:59393718-59393737 Msa0173920:CDS 55.0%
TTTCCGTCCCTTTCCACAGC+CGG - chr1_4:59393734-59393753 None:intergenic 55.0%
!! GCGGAATAGTGTAGTGGGTC+AGG + chr1_4:59394085-59394104 Msa0173920:intron 55.0%
ATGTCGTGTGCAAGAGAGCG+AGG - chr1_4:59394125-59394144 None:intergenic 55.0%
AGGGATGCGTAGGCTATGAC+AGG - chr1_4:59394302-59394321 None:intergenic 55.0%
TGTCATAGCCTACGCATCCC+TGG + chr1_4:59394301-59394320 Msa0173920:intron 55.0%
CTCCTCGGGAAAAATGGGAG+AGG - chr1_4:59394369-59394388 None:intergenic 55.0%
!! CTCTCCCATTTTTCCCGAGG+AGG + chr1_4:59394367-59394386 Msa0173920:intron 55.0%
!! ACAGCAGTATGGCGGATAGC+CGG - chr1_4:59394991-59395010 None:intergenic 55.0%
GAGAAGCTGTCGAAGACGCT+TGG + chr1_4:59395280-59395299 Msa0173920:CDS 55.0%
GAGGCGGAGAAGTTAAGGAG+TGG - chr1_4:59395797-59395816 None:intergenic 55.0%
!! GGTTGGTTTGGTGGTTGAGG+CGG - chr1_4:59395813-59395832 None:intergenic 55.0%
CAGGATGGTGCGATTCCACA+AGG - chr1_4:59395871-59395890 None:intergenic 55.0%
!!! TTTTTGGGGGCTTTGAGGGG+GGG - chr1_4:59395901-59395920 None:intergenic 55.0%
!! AAGCCGCATTTTAGGGAGGC+GGG + chr1_4:59395950-59395969 Msa0173920:intron 55.0%
CAACCCGCCTCCCTAAAATG+CGG - chr1_4:59395956-59395975 None:intergenic 55.0%
!! GCATTTTAGGGAGGCGGGTT+GGG + chr1_4:59395955-59395974 Msa0173920:intron 55.0%
TGGAGACCCCTGAGAACCAT+TGG - chr1_4:59396877-59396896 None:intergenic 55.0%
! CGGGGGACTGTTTGAAATGC+TGG - chr1_4:59397009-59397028 None:intergenic 55.0%
AAACAGTCCCCCGGCTTACT+CGG + chr1_4:59397016-59397035 Msa0173920:CDS 55.0%
TCTTGCTTCCGAGTAAGCCG+GGG - chr1_4:59397027-59397046 None:intergenic 55.0%
CTCTTGCTTCCGAGTAAGCC+GGG - chr1_4:59397028-59397047 None:intergenic 55.0%
CGCTAGAACTAGAAGGGGAC+TGG - chr1_4:59397250-59397269 None:intergenic 55.0%
!! TAGTTCTAGCGGAGAAGCCC+AGG + chr1_4:59397259-59397278 Msa0173920:CDS 55.0%
! CCCTGAGCCATGTTGCTTGT+TGG - chr1_4:59397534-59397553 None:intergenic 55.0%
GTCTGTGCGACTCTGAATGG+AGG - chr1_4:59397859-59397878 None:intergenic 55.0%
TCGGTCTGTGCGACTCTGAA+TGG - chr1_4:59397862-59397881 None:intergenic 55.0%
CTCGGCCTGACGCAGATAAA+TGG - chr1_4:59398105-59398124 None:intergenic 55.0%
CATTTATCTGCGTCAGGCCG+AGG + chr1_4:59398103-59398122 Msa0173920:CDS 55.0%
TACTTCCTCCCACACAGCCT+CGG - chr1_4:59398123-59398142 None:intergenic 55.0%
GGACCATGATTGGTGTGCAG+TGG + chr1_4:59399486-59399505 Msa0173920:CDS 55.0%
! CCCAAAGACAAGGCGCTTGT+TGG + chr1_4:59399685-59399704 Msa0173920:CDS 55.0%
! TGAAGTGGTGTCAAACCGGC+AGG - chr1_4:59399754-59399773 None:intergenic 55.0%
AGCGGGAAAAGATGGTTCCG+AGG + chr1_4:59399780-59399799 Msa0173920:CDS 55.0%
GCTGGTTGACCTGCCTACTT+TGG + chr1_4:59400060-59400079 Msa0173920:intron 55.0%
!! AACCCCAGCCCCCCTTATTT+TGG + chr1_4:59400155-59400174 Msa0173920:intron 55.0%
AGCCAAAATAAGGGGGGCTG+GGG - chr1_4:59400160-59400179 None:intergenic 55.0%
TGTGGAGCCTGTACTGTCAC+GGG - chr1_4:59400274-59400293 None:intergenic 55.0%
GTGTGGAGCCTGTACTGTCA+CGG - chr1_4:59400275-59400294 None:intergenic 55.0%
TCGCGCATAATCCTCAGGTG+TGG - chr1_4:59400292-59400311 None:intergenic 55.0%
ACAAGGAGCAGCTCATGTGG+TGG + chr1_4:59400365-59400384 Msa0173920:CDS 55.0%
GCTGAAGTAAGACGTAGCCG+AGG + chr1_4:59400468-59400487 Msa0173920:CDS 55.0%
!! GCCACCATAGAGAGCATTGC+AGG - chr1_4:59400561-59400580 None:intergenic 55.0%
CTCTATGGTGGCCATAGCAG+CGG + chr1_4:59400569-59400588 Msa0173920:CDS 55.0%
AGCAGCGGTCTGTGTTTGTG+TGG + chr1_4:59400584-59400603 Msa0173920:CDS 55.0%
GGCAACAAGTGTGGCAGGCA+AGG - chr1_4:59392943-59392962 None:intergenic 60.0%
GTGGGATGGGGAAGAGGTCA+AGG + chr1_4:59393426-59393445 Msa0173920:CDS 60.0%
TAGCCGTGTGAATCCGGTGC+AGG + chr1_4:59393496-59393515 Msa0173920:CDS 60.0%
CAGGCGGAGAGTTTGCGAGT+GGG + chr1_4:59393515-59393534 Msa0173920:CDS 60.0%
TGGACGAACCTCCAACCACC+GGG - chr1_4:59393571-59393590 None:intergenic 60.0%
! TCACCGGCTGTGGAAAGGGA+CGG + chr1_4:59393728-59393747 Msa0173920:CDS 60.0%
AATGGCACATTGCAGGCGCG+GGG - chr1_4:59394161-59394180 None:intergenic 60.0%
CAATGGCACATTGCAGGCGC+GGG - chr1_4:59394162-59394181 None:intergenic 60.0%
CCAATGGCACATTGCAGGCG+CGG - chr1_4:59394163-59394182 None:intergenic 60.0%
AGTTTGGGCTGTGGGTCGTG+AGG - chr1_4:59394401-59394420 None:intergenic 60.0%
AGCTGTCGAAGACGCTTGGC+TGG + chr1_4:59395284-59395303 Msa0173920:CDS 60.0%
TTTGAGGGGGGGCAGTTTGC+AGG - chr1_4:59395890-59395909 None:intergenic 60.0%
!! CGCATTTTAGGGAGGCGGGT+TGG + chr1_4:59395954-59395973 Msa0173920:intron 60.0%
CTTGCTTCCGAGTAAGCCGG+GGG - chr1_4:59397026-59397045 None:intergenic 60.0%
CCTGATGCTGTTGGTCCTGC+CGG + chr1_4:59399736-59399755 Msa0173920:CDS 60.0%
CAGTACAGGCTCCACACCTG+AGG + chr1_4:59400278-59400297 Msa0173920:CDS 60.0%
CCGCCTGCACCGGATTCACA+CGG - chr1_4:59393502-59393521 None:intergenic 65.0%
CCGTGTGAATCCGGTGCAGG+CGG + chr1_4:59393499-59393518 Msa0173920:CDS 65.0%
CGCAAACTCTCCGCCTGCAC+CGG - chr1_4:59393512-59393531 None:intergenic 65.0%
GCAGGCGGAGAGTTTGCGAG+TGG + chr1_4:59393514-59393533 Msa0173920:CDS 65.0%
! TCTGGGATCCCGGTGGTTGG+AGG + chr1_4:59393560-59393579 Msa0173920:CDS 65.0%
! TGCTGATGGCGCCGCGATAG+CGG + chr1_4:59394066-59394085 Msa0173920:intron 65.0%
CCGCGCCTGCAATGTGCCAT+TGG + chr1_4:59394160-59394179 Msa0173920:intron 65.0%
AGGGGGGGCAGTTTGCAGGA+TGG - chr1_4:59395886-59395905 None:intergenic 65.0%
ACCTGATGCGCCCTGCCACA+AGG + chr1_4:59398575-59398594 Msa0173920:CDS 65.0%
ACCTTGTGGCAGGGCGCATC+AGG - chr1_4:59398579-59398598 None:intergenic 65.0%
CCGGCAGGACCAACAGCATC+AGG - chr1_4:59399739-59399758 None:intergenic 65.0%
CCGGGATCCCAGACCCGAGT+GGG - chr1_4:59393553-59393572 None:intergenic 70.0%
! CCCACTCGGGTCTGGGATCC+CGG + chr1_4:59393550-59393569 Msa0173920:CDS 70.0%
ACCGGGATCCCAGACCCGAG+TGG - chr1_4:59393554-59393573 None:intergenic 70.0%
! ACTCGGGTCTGGGATCCCGG+TGG + chr1_4:59393553-59393572 Msa0173920:CDS 70.0%
! GGGTCTGGGATCCCGGTGGT+TGG + chr1_4:59393557-59393576 Msa0173920:CDS 70.0%
ACATTGCAGGCGCGGGGAGG+GGG - chr1_4:59394155-59394174 None:intergenic 70.0%
CACATTGCAGGCGCGGGGAG+GGG - chr1_4:59394156-59394175 None:intergenic 70.0%
GCACATTGCAGGCGCGGGGA+GGG - chr1_4:59394157-59394176 None:intergenic 70.0%
TGCGTCAGGCCGAGGCTGTG+TGG + chr1_4:59398111-59398130 Msa0173920:CDS 70.0%
GCGTCAGGCCGAGGCTGTGT+GGG + chr1_4:59398112-59398131 Msa0173920:CDS 70.0%
TCAGGCCGAGGCTGTGTGGG+AGG + chr1_4:59398115-59398134 Msa0173920:CDS 70.0%
GGCACATTGCAGGCGCGGGG+AGG - chr1_4:59394158-59394177 None:intergenic 75.0%
! TTGCAGGCGCGGGGAGGGGG+AGG - chr1_4:59394152-59394171 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 59392790 59400978 59392790 ID=Msa0173920;Name=Msa0173920
chr1_4 mRNA 59392790 59400978 59392790 ID=Msa0173920-mRNA-1;Parent=Msa0173920;Name=Msa0173920-mRNA-1;_AED=0.13;_eAED=0.13;_QI=572|1|1|1|1|1|10|289|1001
chr1_4 exon 59392790 59393933 59392790 ID=Msa0173920-mRNA-1:exon:18634;Parent=Msa0173920-mRNA-1
chr1_4 exon 59395247 59395428 59395247 ID=Msa0173920-mRNA-1:exon:18635;Parent=Msa0173920-mRNA-1
chr1_4 exon 59396697 59397280 59396697 ID=Msa0173920-mRNA-1:exon:18636;Parent=Msa0173920-mRNA-1
chr1_4 exon 59397867 59397941 59397867 ID=Msa0173920-mRNA-1:exon:18637;Parent=Msa0173920-mRNA-1
chr1_4 exon 59398032 59398139 59398032 ID=Msa0173920-mRNA-1:exon:18638;Parent=Msa0173920-mRNA-1
chr1_4 exon 59398243 59398360 59398243 ID=Msa0173920-mRNA-1:exon:18639;Parent=Msa0173920-mRNA-1
chr1_4 exon 59398455 59398596 59398455 ID=Msa0173920-mRNA-1:exon:18640;Parent=Msa0173920-mRNA-1
chr1_4 exon 59398755 59398899 59398755 ID=Msa0173920-mRNA-1:exon:18641;Parent=Msa0173920-mRNA-1
chr1_4 exon 59399202 59399837 59399202 ID=Msa0173920-mRNA-1:exon:18642;Parent=Msa0173920-mRNA-1
chr1_4 exon 59400246 59400978 59400246 ID=Msa0173920-mRNA-1:exon:18643;Parent=Msa0173920-mRNA-1
chr1_4 five_prime_UTR 59392790 59393361 59392790 ID=Msa0173920-mRNA-1:five_prime_utr;Parent=Msa0173920-mRNA-1
chr1_4 CDS 59393362 59393933 59393362 ID=Msa0173920-mRNA-1:cds;Parent=Msa0173920-mRNA-1
chr1_4 CDS 59395247 59395428 59395247 ID=Msa0173920-mRNA-1:cds;Parent=Msa0173920-mRNA-1
chr1_4 CDS 59396697 59397280 59396697 ID=Msa0173920-mRNA-1:cds;Parent=Msa0173920-mRNA-1
chr1_4 CDS 59397867 59397941 59397867 ID=Msa0173920-mRNA-1:cds;Parent=Msa0173920-mRNA-1
chr1_4 CDS 59398032 59398139 59398032 ID=Msa0173920-mRNA-1:cds;Parent=Msa0173920-mRNA-1
chr1_4 CDS 59398243 59398360 59398243 ID=Msa0173920-mRNA-1:cds;Parent=Msa0173920-mRNA-1
chr1_4 CDS 59398455 59398596 59398455 ID=Msa0173920-mRNA-1:cds;Parent=Msa0173920-mRNA-1
chr1_4 CDS 59398755 59398899 59398755 ID=Msa0173920-mRNA-1:cds;Parent=Msa0173920-mRNA-1
chr1_4 CDS 59399202 59399837 59399202 ID=Msa0173920-mRNA-1:cds;Parent=Msa0173920-mRNA-1
chr1_4 CDS 59400246 59400689 59400246 ID=Msa0173920-mRNA-1:cds;Parent=Msa0173920-mRNA-1
chr1_4 three_prime_UTR 59400690 59400978 59400690 ID=Msa0173920-mRNA-1:three_prime_utr;Parent=Msa0173920-mRNA-1
Gene Sequence

>Msa0173920

ATGGGGGAAAGGTTGGGTGCTGAAAATTATCATTTTTATGGTGTTGGTGGTTCATCTGATTTTAGTGGGATGGGGAAGAGGTCAAGGGAATGGAATTTGAATGATTGGAGATGGGATGGTGATTTGTTTATAGCTAGCCGTGTGAATCCGGTGCAGGCGGAGAGTTTGCGAGTGGGACAACAGTTTTTCCCACTCGGGTCTGGGATCCCGGTGGTTGGAGGTTCGTCCAATACGTCTTCTTCATGCTCCGAGGAAGGAGATCTTGAGAAAGGGAATAAGGAAGGGGATAGGAAAAGGAGAGTGCTGGAAGATGATGGTTTGAATGATGAAGCTGGTGCACTTAGCTTAAATCTTGCAGGACATGTTTCACCGGCTGTGGAAAGGGACGGAAAAAAGAGCAGAGTAGCTGGAGGAACTTCGAACCGAGCTGTTTGTCAGGTTGAAGACTGTGGTGCAGATCTGAGTAGAGGTAAGGATTATCACAGACGTCATAAAGTTTGTGAGATGCATTCTAAGGCTAGTAGGGCTCTTGTGGGAAATGCAATGCAGAGGTTTTGTCAACAGTGTAGTAGGTTTCACATACTTCAAGAGTTCGATGAAGGAAAGAGAAGCTGTCGAAGACGCTTGGCTGGCCATAACAAACGGAGAAGGAAAACAAATCAAGAAGCTGTTCCTAATGGAAGTCCAACAAATGATGATCAGACTAGTAGTTATCTGTTGATTAGTTTATTGAAGATACTTTCAAATATGCATTCTGACAGGTCAGATCAGCCTACAGATCAGGATCTATTAACTCATCTTCTAAGGAGTCTTGCAAGTCAGAATGATGAACAAGGGAGCAAGAACTTGTCAAATCTTTTACGAGAACAAGAGAATTTGTTGAGAGAAGGGGGTTCTTCAAGAAATTCAGGGATGGTATCAGCTTTATTCTCCAATGGTTCTCAGGGGTCTCCAACTGTTATAACACAACATCAAACTGTATCTATGAATCAAATGCAACAAGAAATGGTGCATACACATGATGTTAGAACCTCTGATCATCAACTCATATCTTCAATAAAACCCAGCATTTCAAACAGTCCCCCGGCTTACTCGGAAGCAAGAGATAGCAGTGGACAAACAAAGATGAATAATTTTGATTTGAATGACATATATGTTGACTCAGATGATGGAACGGAAGATCTAGAAAGACTGCCCGTCTCTACAAATCTTGCTACTAGCTCTGTTGACTACCCTTGGACACAACAAGATTCTCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCAGATTCTGCATCTGCCCAGTCCCCTTCTAGTTCTAGCGGAGAAGCCCAGAGTCGCACAGACCGAATTGTTTTTAAACTCTTCGGTAAAGAGCCAAATGAATTTCCTCTTGTACTTAGAGCACAGATTCTAGATTGGTTATCCCACAGTCCTACTGATATTGAGAGCTACATACGCCCTGGTTGTATTGTTTTGACCATTTATCTGCGTCAGGCCGAGGCTGTGTGGGAGGAACTTTGCTGTGATCTGACTTCCAGTTTGATTAAGCTGCTGGATGTCTCAGATGATACGTTTTGGAAAACTGGATGGGTTCATATCAGAGTGCAACATCAAATGGCATTCATTTTCAACGGTCAAGTTGTCATAGATACATCACTACCTTTCCGAAGCAACAATTATAGCAAAATTTGGACTGTTAGTCCAATTGCTGTACCGGCATCAAAGAGAGCTCAATTTTCTGTTAAAGGTGTCAACCTGATGCGCCCTGCCACAAGGTTAATGTGTGCTTTAGAAGGAAAATATCTGGTCTGTGAAGATGCTCATGAGTCAACGGATCAATACTCCGAGGAGCTTGATGAACTTCAGTGCATCCAATTTTCATGTTCTGTACCTGTGACAAATGGAAGAGGATTTATTGAGATTGAGGACCAGGGTTTGAGTAGCAGCTTCTTTCCTTTCATAGTGGCAGAAGAGGATGTTTGCTCAGAGATCCGCGTGCTTGAACCTCTACTAGAATCAAGTGAAACTGATCCAGATATTGAAGGGACTGGAAAAATTAAAGCCAAAAGTCAAGCTATGGATTTCATTCATGAAATGGGCTGGCTTCTTCACAGAAGCCAATTGAAATATAGGATGGTTAACTTGAACTCTGGTGTAGATCTCTTTCCATTAGAACGGTTCACATGGCTTATGGAGTTTTCAATGGACCATGATTGGTGTGCAGTGGTGAAAAAACTGTTGAACCTACTCTTTGATGAAACTGTTAATAAAGGAGATCACCCTACATTGTATCAAGCACTTTCAGAAATGGGTCTTCTTCACAGAGCTGTAAGGAGAAATAGCAAACAGTTAGTGGAGCTGCTTTTGCGATATGTTCCTGACAATGCATCTGATGAACTAGGACCCAAAGACAAGGCGCTTGTTGGTGGAAAGAATCATAGCTACTTGTTTAGACCTGATGCTGTTGGTCCTGCCGGTTTGACACCACTTCATATAGCAGCGGGAAAAGATGGTTCCGAGGATGTACTGGATGCTCTGACTAATGATCCTTGCATGGTGGGAATTGAGGCATGGAAGAATGCCCGTGACAGTACAGGCTCCACACCTGAGGATTATGCGCGATTACGTGGCCATTATACTTACATTCACTTAGTGCAGAAAAAAATTAACAAAACACAAGGAGCAGCTCATGTGGTGGTTGAGATTCCCAGCAATACGACAGAGAGCAATAAAACCCCGAAGCAAAATGAGTCATTCACTAGCTTAGAGATTGGAAAAGCTGAAGTAAGACGTAGCCGAGGGAACTGTAAACTTTGTGATACTAAAATTTCTTGTAGAACTGCAGTAGGAAGGTCTATGGTATACAGACCTGCAATGCTCTCTATGGTGGCCATAGCAGCGGTCTGTGTTTGTGTGGCTCTTCTGTTTAAGAGCTCACCCGAAGTTCTATACATGTTCCGACCTTTCAGATGGGAATCATTGGAGTTCGGAACAAGCTAA
Protein sequence

>Msa0173920

MGERLGAENYHFYGVGGSSDFSGMGKRSREWNLNDWRWDGDLFIASRVNPVQAESLRVGQQFFPLGSGIPVVGGSSNTSSSCSEEGDLEKGNKEGDRKRRVLEDDGLNDEAGALSLNLAGHVSPAVERDGKKSRVAGGTSNRAVCQVEDCGADLSRGKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRFHILQEFDEGKRSCRRRLAGHNKRRRKTNQEAVPNGSPTNDDQTSSYLLISLLKILSNMHSDRSDQPTDQDLLTHLLRSLASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQTVSMNQMQQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSEARDSSGQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLATSSVDYPWTQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNEFPLVLRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEELCCDLTSSLIKLLDVSDDTFWKTGWVHIRVQHQMAFIFNGQVVIDTSLPFRSNNYSKIWTVSPIAVPASKRAQFSVKGVNLMRPATRLMCALEGKYLVCEDAHESTDQYSEELDELQCIQFSCSVPVTNGRGFIEIEDQGLSSSFFPFIVAEEDVCSEIRVLEPLLESSETDPDIEGTGKIKAKSQAMDFIHEMGWLLHRSQLKYRMVNLNSGVDLFPLERFTWLMEFSMDHDWCAVVKKLLNLLFDETVNKGDHPTLYQALSEMGLLHRAVRRNSKQLVELLLRYVPDNASDELGPKDKALVGGKNHSYLFRPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYARLRGHYTYIHLVQKKINKTQGAAHVVVEIPSNTTESNKTPKQNESFTSLEIGKAEVRRSRGNCKLCDTKISCRTAVGRSMVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYMFRPFRWESLEFGTS*