AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0177820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0177820 MtrunA17_Chr1g0200901 89.462 446 8 4 1 446 1 407 0.0 768
Msa0177820 MtrunA17_Chr7g0271371 83.654 104 17 0 343 446 18 121 1.55e-56 182
Msa0177820 MtrunA17_Chr1g0185501 28.378 296 193 11 158 440 23 312 1.74e-29 117
Msa0177820 MtrunA17_Chr1g0185501 27.778 180 122 5 122 295 114 291 5.10e-17 81.6
Msa0177820 MtrunA17_Chr1g0185501 22.650 234 176 3 130 358 79 312 3.79e-15 76.3
Msa0177820 MtrunA17_Chr1g0185501 33.058 121 78 2 326 443 21 141 4.52e-15 75.9
Msa0177820 MtrunA17_Chr4g0067151 25.817 306 203 11 155 440 20 321 6.79e-25 104
Msa0177820 MtrunA17_Chr4g0067151 25.431 232 156 9 93 316 98 320 6.81e-17 81.6
Msa0177820 MtrunA17_Chr4g0067151 23.504 234 174 4 130 358 88 321 1.15e-14 74.7
Msa0177820 MtrunA17_Chr5g0401671 26.710 307 155 9 121 360 249 552 3.44e-24 105
Msa0177820 MtrunA17_Chr5g0401671 27.193 228 145 6 236 443 234 460 2.12e-12 68.9
Msa0177820 MtrunA17_Chr4g0053651 25.850 294 153 7 133 361 243 536 7.48e-23 101
Msa0177820 MtrunA17_Chr5g0401661 25.243 309 159 9 121 360 337 642 5.41e-22 99.0
Msa0177820 MtrunA17_Chr5g0401661 25.705 319 196 9 158 442 331 642 4.14e-20 93.2
Msa0177820 MtrunA17_Chr5g0401661 26.522 230 146 6 236 443 322 550 3.64e-11 65.5
Msa0177820 MtrunA17_Chr1g0176241 26.923 338 214 12 122 443 122 442 1.57e-20 94.0
Msa0177820 MtrunA17_Chr1g0176241 26.923 208 141 4 240 440 114 317 2.56e-19 90.1
Msa0177820 MtrunA17_Chr1g0176241 26.877 253 160 10 116 358 244 481 1.29e-14 75.9
Msa0177820 MtrunA17_Chr3g0093681 27.969 261 178 7 146 400 298 554 1.72e-19 90.9
Msa0177820 MtrunA17_Chr3g0093681 27.174 276 193 5 170 440 280 552 5.88e-19 89.4
Msa0177820 MtrunA17_Chr7g0253861 25.084 299 206 6 158 442 51 345 1.82e-19 89.4
Msa0177820 MtrunA17_Chr7g0253861 25.238 210 150 4 238 443 48 254 2.10e-15 77.4
Msa0177820 MtrunA17_Chr1g0172501 27.969 261 178 7 146 400 298 554 2.01e-19 90.9
Msa0177820 MtrunA17_Chr1g0172501 27.174 276 193 5 170 440 280 552 4.95e-19 89.7
Msa0177820 MtrunA17_Chr5g0405851 24.252 301 205 7 160 440 152 449 2.86e-18 87.0
Msa0177820 MtrunA17_Chr5g0405851 23.381 278 184 9 146 400 180 451 1.15e-12 69.7
Msa0177820 MtrunA17_Chr3g0136971 25.430 291 191 7 158 442 346 616 3.57e-18 87.4
Msa0177820 MtrunA17_Chr3g0136971 27.602 221 151 6 158 374 415 630 3.17e-15 78.2
Msa0177820 MtrunA17_Chr2g0295791 27.586 261 159 7 158 403 166 411 8.14e-18 85.5
Msa0177820 MtrunA17_Chr2g0295791 25.862 232 161 6 220 444 142 369 5.91e-16 79.7
Msa0177820 MtrunA17_Chr2g0295791 29.775 178 119 6 119 293 170 344 3.12e-14 74.7
Msa0177820 MtrunA17_Chr3g0095501 25.329 304 198 10 158 443 266 558 4.14e-17 84.0
Msa0177820 MtrunA17_Chr6g0448921 24.561 228 164 5 134 358 31 253 1.30e-16 82.4
Msa0177820 MtrunA17_Chr6g0448921 34.194 155 95 4 130 280 69 220 5.01e-16 80.9
Msa0177820 MtrunA17_Chr6g0448921 25.701 214 144 6 238 443 9 215 6.28e-15 77.4
Msa0177820 MtrunA17_Chr4g0058091 25.614 285 197 9 157 431 225 504 4.00e-16 80.5
Msa0177820 MtrunA17_Chr4g0058091 22.581 279 117 8 119 350 272 498 8.78e-11 63.9
Msa0177820 MtrunA17_Chr4g0070791 24.823 282 190 7 127 392 25 300 5.94e-16 78.6
Msa0177820 MtrunA17_Chr2g0284241 24.837 306 181 9 166 440 12 299 2.45e-15 77.0
Msa0177820 MtrunA17_Chr8g0383711 23.102 303 194 8 158 440 14 297 9.13e-15 74.7
Msa0177820 MtrunA17_Chr4g0035611 23.973 292 198 9 156 441 3 276 9.34e-15 77.0
Msa0177820 MtrunA17_Chr1g0185891 25.347 288 192 14 129 399 303 584 9.60e-15 76.3
Msa0177820 MtrunA17_Chr4g0057141 25.347 288 192 14 129 399 364 645 1.29e-14 76.3
Msa0177820 MtrunA17_Chr1g0197551 23.288 292 200 9 156 441 3 276 1.86e-14 75.9
Msa0177820 MtrunA17_Chr2g0281451 24.670 227 165 4 134 358 30 252 1.99e-14 75.9
Msa0177820 MtrunA17_Chr2g0281451 32.768 177 105 5 132 297 70 243 2.48e-14 75.5
Msa0177820 MtrunA17_Chr2g0281451 26.047 215 144 6 238 444 8 215 5.81e-11 65.1
Msa0177820 MtrunA17_Chr3g0103361 25.385 260 182 7 155 406 12 267 6.03e-14 72.4
Msa0177820 MtrunA17_Chr4g0069701 24.507 355 243 11 107 441 345 694 6.22e-14 74.3
Msa0177820 MtrunA17_Chr8g0392701 21.405 299 184 6 121 410 16 272 8.61e-14 72.0
Msa0177820 MtrunA17_Chr3g0138311 25.705 319 209 9 137 441 593 897 2.17e-13 72.4
Msa0177820 MtrunA17_Chr3g0116561 24.074 270 190 7 157 416 220 484 2.86e-13 71.6
Msa0177820 MtrunA17_Chr1g0171711 24.839 310 213 11 98 399 489 786 3.61e-13 71.6
Msa0177820 MtrunA17_Chr2g0307941 26.407 231 161 4 158 380 58 287 4.98e-13 71.6
Msa0177820 MtrunA17_Chr2g0331981 22.441 254 185 7 195 440 7 256 5.66e-13 71.2
Msa0177820 MtrunA17_Chr4g0004241 21.429 294 188 8 150 440 3 256 6.83e-13 70.9
Msa0177820 MtrunA17_Chr4g0020641 36.893 103 55 2 125 227 4 96 2.39e-12 63.2
Msa0177820 MtrunA17_Chr7g0266251 30.952 168 101 6 122 275 72 238 2.50e-12 67.8
Msa0177820 MtrunA17_Chr8g0352821 21.071 280 175 6 158 434 179 415 2.61e-12 68.9
Msa0177820 MtrunA17_Chr8g0352821 21.531 209 158 4 240 445 178 383 7.24e-12 67.8
Msa0177820 MtrunA17_Chr2g0292301 30.337 178 119 4 108 284 199 372 3.61e-12 68.2
Msa0177820 MtrunA17_Chr2g0308391 25.110 227 136 10 244 442 125 345 1.00e-11 66.6
Msa0177820 MtrunA17_Chr8g0390861 25.402 311 192 12 155 440 850 1145 1.44e-11 67.0
Msa0177820 MtrunA17_Chr1g0183051 24.513 359 212 14 92 440 194 503 1.63e-11 66.2
Msa0177820 MtrunA17_Chr3g0099061 21.201 283 140 7 170 444 222 429 3.09e-11 65.5
Msa0177820 MtrunA17_Chr7g0237271 22.054 331 233 9 77 399 471 784 3.75e-11 65.5
Msa0177820 MtrunA17_Chr2g0331961 21.453 289 182 7 157 441 12 259 3.96e-11 63.9
Msa0177820 MtrunA17_Chr3g0144511 24.684 316 206 10 158 444 61 373 5.32e-11 63.9
Msa0177820 MtrunA17_Chr1g0168391 26.201 229 153 4 134 353 238 459 5.42e-11 64.7
Msa0177820 MtrunA17_Chr7g0237241 22.054 331 233 9 77 399 462 775 6.43e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0177820 AT1G71840.1 52.668 431 149 8 18 441 16 398 1.38e-147 426
Msa0177820 AT4G02730.1 27.027 296 200 8 158 441 39 330 6.90e-26 107
Msa0177820 AT4G02730.1 25.926 270 186 9 184 444 25 289 2.86e-20 92.0
Msa0177820 AT4G02730.1 25.128 195 137 5 109 295 115 308 7.76e-16 79.0
Msa0177820 AT4G02730.1 24.171 211 116 4 238 446 36 204 8.69e-13 69.7
Msa0177820 AT3G49660.1 24.590 305 208 8 155 443 17 315 2.19e-25 106
Msa0177820 AT3G49660.1 27.513 189 127 6 134 316 127 311 5.77e-19 87.8
Msa0177820 AT3G49660.1 24.138 232 173 3 130 358 81 312 8.39e-16 78.6
Msa0177820 AT5G67320.1 26.730 318 194 8 158 443 261 571 6.75e-23 102
Msa0177820 AT5G67320.1 22.969 357 169 8 121 412 267 582 4.09e-21 96.7
Msa0177820 AT2G41500.1 25.180 278 196 6 169 439 262 534 7.88e-20 92.4
Msa0177820 AT2G41500.1 26.087 276 194 8 131 400 266 537 1.68e-17 85.5
Msa0177820 AT2G41500.2 25.180 278 196 6 169 439 262 534 7.88e-20 92.4
Msa0177820 AT2G41500.2 26.087 276 194 8 131 400 266 537 1.68e-17 85.5
Msa0177820 AT5G52820.1 27.353 340 204 13 125 443 115 432 4.06e-19 90.1
Msa0177820 AT5G52820.1 28.302 212 136 7 239 440 103 308 1.80e-17 85.1
Msa0177820 AT5G52820.1 25.523 239 145 8 134 359 254 472 1.57e-14 75.9
Msa0177820 AT2G43770.1 25.000 292 199 9 158 434 49 335 6.21e-18 85.1
Msa0177820 AT2G43770.1 26.667 210 147 4 238 443 46 252 1.94e-15 77.8
Msa0177820 AT2G32700.6 24.615 325 226 11 82 399 473 785 7.75e-18 86.7
Msa0177820 AT2G32700.2 24.615 325 226 11 82 399 475 787 8.56e-18 86.7
Msa0177820 AT2G32700.5 24.615 325 226 11 82 399 475 787 8.56e-18 86.7
Msa0177820 AT2G32700.1 24.615 325 226 11 82 399 475 787 8.56e-18 86.7
Msa0177820 AT2G32700.4 24.615 325 226 11 82 399 475 787 8.56e-18 86.7
Msa0177820 AT2G32700.3 24.615 325 226 11 82 399 475 787 8.56e-18 86.7
Msa0177820 AT2G32700.7 24.615 325 226 11 82 399 494 806 1.04e-17 86.3
Msa0177820 AT4G15900.1 25.806 217 155 3 231 444 162 375 1.91e-17 85.1
Msa0177820 AT4G15900.1 26.545 275 181 8 158 423 172 434 1.08e-14 76.6
Msa0177820 AT4G15900.1 29.609 179 120 6 119 294 176 351 7.18e-13 70.9
Msa0177820 AT3G16650.1 25.463 216 156 3 231 444 156 368 7.82e-17 83.2
Msa0177820 AT3G16650.1 29.255 188 126 5 158 343 166 348 5.45e-15 77.4
Msa0177820 AT5G25150.1 25.088 283 175 7 170 442 360 615 2.01e-16 82.4
Msa0177820 AT5G25150.1 26.818 220 154 5 158 374 414 629 1.34e-15 79.7
Msa0177820 AT5G25150.1 23.372 261 161 8 120 354 419 666 1.78e-11 66.6
Msa0177820 AT5G25150.2 25.088 283 175 7 170 442 360 615 2.50e-16 82.0
Msa0177820 AT5G25150.2 26.818 220 154 5 158 374 414 629 1.55e-15 79.3
Msa0177820 AT5G08390.1 25.439 228 162 5 134 358 31 253 3.99e-16 81.6
Msa0177820 AT5G08390.1 25.234 214 145 6 238 443 9 215 4.26e-15 78.2
Msa0177820 AT5G08390.1 32.597 181 112 5 132 308 71 245 5.09e-15 78.2
Msa0177820 AT2G21390.1 24.399 291 198 9 156 441 3 276 7.48e-16 80.9
Msa0177820 AT5G56130.1 25.385 260 182 7 155 406 13 268 1.35e-15 77.8
Msa0177820 AT5G23430.1 34.254 181 109 6 132 308 71 245 1.61e-15 79.7
Msa0177820 AT5G23430.1 25.234 214 145 6 238 443 9 215 4.00e-15 78.6
Msa0177820 AT5G23430.1 24.561 228 164 5 134 358 31 253 9.04e-15 77.4
Msa0177820 AT5G23430.3 34.254 181 109 6 132 308 71 245 1.62e-15 79.7
Msa0177820 AT5G23430.3 25.234 214 145 6 238 443 9 215 3.79e-15 78.6
Msa0177820 AT5G23430.3 24.561 228 164 5 134 358 31 253 8.79e-15 77.4
Msa0177820 AT5G23430.2 34.254 181 109 6 132 308 71 245 1.62e-15 79.7
Msa0177820 AT5G23430.2 25.234 214 145 6 238 443 9 215 3.79e-15 78.6
Msa0177820 AT5G23430.2 24.561 228 164 5 134 358 31 253 8.79e-15 77.4
Msa0177820 AT1G11160.4 23.729 236 172 5 134 366 30 260 2.52e-15 79.0
Msa0177820 AT1G11160.4 29.545 176 114 4 130 296 68 242 9.18e-13 71.2
Msa0177820 AT1G11160.4 23.786 206 114 3 238 442 8 171 5.40e-12 68.6
Msa0177820 AT1G11160.2 23.729 236 172 5 134 366 30 260 2.63e-15 79.0
Msa0177820 AT1G11160.2 29.545 176 114 4 130 296 68 242 8.69e-13 71.2
Msa0177820 AT1G11160.2 23.786 206 114 3 238 442 8 171 5.06e-12 68.6
Msa0177820 AT1G11160.1 23.729 236 172 5 134 366 30 260 2.73e-15 79.0
Msa0177820 AT1G11160.1 29.775 178 111 5 130 296 68 242 9.17e-13 71.2
Msa0177820 AT1G11160.1 23.786 206 114 3 238 442 8 171 5.11e-12 68.6
Msa0177820 AT1G62020.1 24.055 291 199 9 156 441 3 276 3.36e-15 79.0
Msa0177820 AT1G48630.1 23.333 300 177 8 121 410 16 272 5.72e-15 76.3
Msa0177820 AT1G18080.1 22.408 299 182 6 121 410 16 273 5.78e-15 76.3
Msa0177820 AT3G18140.1 24.150 294 190 7 170 442 1 282 6.10e-15 75.9
Msa0177820 AT3G18130.1 22.667 300 179 7 121 410 16 272 1.47e-14 75.1
Msa0177820 AT1G11160.3 23.611 216 156 6 154 366 9 218 3.80e-14 75.5
Msa0177820 AT1G11160.3 29.545 176 114 4 130 296 26 200 8.79e-13 71.2
Msa0177820 AT5G08560.1 25.658 304 197 10 155 440 267 559 5.19e-14 74.7
Msa0177820 AT5G08560.2 25.658 304 197 10 155 440 267 559 5.19e-14 74.7
Msa0177820 AT5G08560.3 25.658 304 197 10 155 440 267 559 5.19e-14 74.7
Msa0177820 AT1G61210.3 31.609 174 109 4 132 296 70 242 7.55e-14 74.7
Msa0177820 AT1G61210.3 22.907 227 169 4 134 358 30 252 8.47e-14 74.3
Msa0177820 AT1G61210.3 24.762 210 151 5 238 443 8 214 1.01e-11 67.8
Msa0177820 AT1G61210.1 31.609 174 109 4 132 296 70 242 1.06e-13 73.9
Msa0177820 AT1G61210.1 22.907 227 169 4 134 358 30 252 1.81e-13 73.6
Msa0177820 AT1G61210.1 24.762 210 151 5 238 443 8 214 1.96e-11 67.0
Msa0177820 AT1G61210.2 31.609 174 109 4 132 296 70 242 1.10e-13 73.9
Msa0177820 AT1G61210.2 22.907 227 169 4 134 358 30 252 2.04e-13 73.2
Msa0177820 AT1G61210.2 24.762 210 151 5 238 443 8 214 2.32e-11 66.6
Msa0177820 AT2G46290.1 26.587 252 144 9 199 443 33 250 1.35e-13 72.4
Msa0177820 AT5G13480.3 25.100 251 175 8 191 434 99 343 2.40e-13 72.4
Msa0177820 AT5G13480.3 22.967 209 155 4 240 445 106 311 3.25e-11 65.9
Msa0177820 AT5G13480.4 25.100 251 175 8 191 434 99 343 2.73e-13 72.4
Msa0177820 AT5G13480.4 22.967 209 155 4 240 445 106 311 3.42e-11 65.9
Msa0177820 AT5G13480.1 25.100 251 175 8 191 434 111 355 2.97e-13 72.4
Msa0177820 AT5G13480.1 22.967 209 155 4 240 445 118 323 3.49e-11 65.9
Msa0177820 AT1G79990.1 21.429 294 188 8 150 440 3 256 3.30e-13 72.4
Msa0177820 AT5G13480.2 25.100 251 175 8 191 434 122 366 3.31e-13 72.0
Msa0177820 AT5G13480.2 22.967 209 155 4 240 445 129 334 4.62e-11 65.5
Msa0177820 AT1G79990.2 21.429 294 188 8 150 440 3 256 3.53e-13 72.4
Msa0177820 AT1G52360.4 20.748 294 190 8 150 440 3 256 1.21e-12 70.5
Msa0177820 AT1G52360.1 20.748 294 190 8 150 440 3 256 1.21e-12 70.5
Msa0177820 AT3G15980.3 22.785 237 171 7 212 440 24 256 1.32e-12 70.5
Msa0177820 AT3G15980.6 22.785 237 171 7 212 440 24 256 1.32e-12 70.5
Msa0177820 AT3G15980.2 22.785 237 171 7 212 440 24 256 1.32e-12 70.5
Msa0177820 AT3G15980.4 22.785 237 171 7 212 440 24 256 1.32e-12 70.5
Msa0177820 AT1G52360.3 20.748 294 190 8 150 440 3 256 1.54e-12 70.5
Msa0177820 AT1G52360.2 20.748 294 190 8 150 440 47 300 1.62e-12 70.1
Msa0177820 AT3G15980.7 22.785 237 171 7 212 440 24 256 1.69e-12 70.1
Msa0177820 AT3G15980.1 22.785 237 171 7 212 440 24 256 1.99e-12 70.1
Msa0177820 AT3G15980.5 22.785 237 171 7 212 440 24 256 2.19e-12 69.7
Msa0177820 AT5G64730.1 28.641 206 135 6 241 441 14 212 2.81e-12 67.8
Msa0177820 AT5G64730.1 23.649 296 205 9 155 439 11 296 6.14e-12 66.6
Msa0177820 AT1G73720.1 29.843 191 118 7 111 287 201 389 4.79e-12 68.2
Msa0177820 AT1G73720.1 31.452 124 74 3 332 444 213 336 1.73e-11 66.6
Msa0177820 AT3G42660.1 25.974 231 162 4 158 380 58 287 5.55e-12 68.6
Msa0177820 AT1G10580.1 23.693 287 198 13 129 399 292 573 6.42e-12 68.2
Msa0177820 AT2G46280.2 23.413 252 152 7 199 443 6 223 7.41e-12 66.6
Msa0177820 AT2G46280.1 23.413 252 152 7 199 443 6 223 7.41e-12 66.6
Msa0177820 AT2G46280.3 23.413 252 152 7 199 443 6 223 1.65e-11 64.7
Msa0177820 AT4G32551.1 24.351 308 209 9 144 441 638 931 1.67e-11 67.0
Msa0177820 AT5G43920.1 24.281 313 200 12 152 440 214 513 1.91e-11 66.2
Msa0177820 AT4G32551.2 24.351 308 209 9 144 441 676 969 2.11e-11 66.6
Msa0177820 AT2G47410.6 24.686 239 152 7 209 440 18 235 2.73e-11 66.6
Msa0177820 AT2G47410.3 24.686 239 152 7 209 440 18 235 2.73e-11 66.6
Msa0177820 AT2G47410.5 24.686 239 152 7 209 440 200 417 2.92e-11 66.6
Msa0177820 AT5G16750.1 23.636 330 223 12 126 430 317 642 4.32e-11 65.9
Msa0177820 AT1G15440.2 27.189 217 144 8 120 328 347 557 5.38e-11 65.5
Msa0177820 AT1G15440.2 25.641 234 157 10 211 434 314 540 7.98e-11 64.7
Msa0177820 AT1G15440.1 27.189 217 144 8 120 328 387 597 5.92e-11 65.5
Msa0177820 AT1G15440.1 25.641 234 157 10 211 434 354 580 7.31e-11 65.1
Msa0177820 AT2G05720.1 27.979 193 110 7 158 345 102 270 6.23e-11 63.5
Msa0177820 AT1G49040.1 25.974 308 188 13 158 440 839 1131 7.28e-11 65.1
Msa0177820 AT2G26060.2 31.841 201 106 10 118 289 68 266 9.55e-11 63.5

Find 151 sgRNAs with CRISPR-Local

Find 551 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGCCACGATGGAACGTTTC+TGG 0.171901 1_4:-65113049 Msa0177820:CDS
ATTCAAAATTAATATTAAAA+AGG 0.227965 1_4:+65107361 None:intergenic
GGTGGTGATGGTGGTGGTGG+TGG 0.266171 1_4:-65113806 Msa0177820:CDS
GACTTCCTTATGTCGTTTAA+TGG 0.278873 1_4:-65112778 Msa0177820:CDS
TTTCTCTGGAGGATCCTTAA+TGG 0.279006 1_4:-65113407 Msa0177820:CDS
ATGATGGAGCTGTGAGATTA+TGG 0.280439 1_4:-65107770 Msa0177820:CDS
ACTTCAACTATTGCTCTTAC+TGG 0.290120 1_4:-65109728 Msa0177820:CDS
ACAGATTCTGTATCGAGTTT+AGG 0.294590 1_4:-65113075 Msa0177820:CDS
ACGATGCAACCTTGAGAATA+TGG 0.299157 1_4:-65112600 Msa0177820:CDS
TTGATGGAACTGTTAAAATC+TGG 0.307851 1_4:-65113014 Msa0177820:CDS
TTGTTTGATTGCATATGATA+TGG 0.321150 1_4:-65107590 Msa0177820:three_prime_UTR
AACTGTATGACAGTGGTTCC+TGG 0.340668 1_4:-65108290 Msa0177820:intron
GAATGGGCTTCCCAGCTTAA+TGG 0.341217 1_4:-65113383 Msa0177820:intron
GGGAAGCCCATTCTCCATTA+AGG 0.345840 1_4:+65113393 None:intergenic
TCATCATCACTATGATGATT+TGG 0.347935 1_4:+65114110 None:intergenic
GGAGAGCCGCCAGGAGGATC+AGG 0.348540 1_4:+65113957 None:intergenic
CAAGCATGTATATGTCCTTT+AGG 0.349274 1_4:-65107527 Msa0177820:three_prime_UTR
GATGGTGATGGTGGTGGTGA+TGG 0.350066 1_4:-65113818 Msa0177820:CDS
AGAGGAAATGTCCTCATTGC+TGG 0.358059 1_4:-65112844 Msa0177820:CDS
GGTGGTGGTGATGGTGGTGG+TGG 0.368236 1_4:-65113809 Msa0177820:CDS
AATCTGAAAGGCACGTTAGA+TGG 0.390124 1_4:-65112979 Msa0177820:CDS
GTTAAAATCTGGGATGCGTC+TGG 0.391279 1_4:-65113003 Msa0177820:CDS
GCATGGATAAAATGACCATC+TGG 0.392161 1_4:-65108254 Msa0177820:CDS
TGCCTCATCTGTTGGGCTGC+AGG 0.397890 1_4:+65113463 None:intergenic
CCTCATGCTCACAAATGCTT+CGG 0.405559 1_4:+65108211 None:intergenic
GGAGGATCAGGGCCACCATC+TGG 0.408902 1_4:+65113969 None:intergenic
GATGGTGGTGGTGATGGTGG+TGG 0.409890 1_4:-65113812 Msa0177820:CDS
GCCACAAGTGCCTCATCTGT+TGG 0.411659 1_4:+65113455 None:intergenic
AACAATATATACCATTAAGC+TGG 0.414279 1_4:+65113372 None:intergenic
CTCATGCTCACAAATGCTTC+GGG 0.414517 1_4:+65108212 None:intergenic
AGTGGTTCCTGGGCTGCAAT+TGG 0.415085 1_4:-65108279 Msa0177820:CDS
GCTCTTACTGGTTCTGTGGA+TGG 0.419290 1_4:-65109716 Msa0177820:CDS
GATGAGGCACTTGTGGCAAC+AGG 0.424253 1_4:-65113449 Msa0177820:CDS
GGTGATGGTGGTGGTGATGG+TGG 0.426374 1_4:-65113815 Msa0177820:CDS
CCACAAGTGCCTCATCTGTT+GGG 0.429128 1_4:+65113456 None:intergenic
TGTTTGATTGCATATGATAT+GGG 0.430437 1_4:-65107589 Msa0177820:three_prime_UTR
CGACGGCGGCGGCTGCTGTA+TGG 0.432845 1_4:+65114485 None:intergenic
CCTGGCGGCTCTCCCGATCC+AGG 0.435267 1_4:-65113948 Msa0177820:intron
CTCACAAATGCTTCGGGCTA+AGG 0.436027 1_4:+65108218 None:intergenic
GGTTCCTGGGCTGCAATTGG+AGG 0.441360 1_4:-65108276 Msa0177820:CDS
GAATGTGTCAGAACATTTAG+AGG 0.443558 1_4:-65107732 Msa0177820:CDS
GATGGTGATGGTGATGGTGG+TGG 0.443920 1_4:-65113824 Msa0177820:CDS
GGAGGATCCTTAATGGAGAA+TGG 0.450325 1_4:-65113400 Msa0177820:CDS
GATGGTGATGGTGATGGTGA+TGG 0.452355 1_4:-65113830 Msa0177820:CDS
GGATTGTCGTCAGGTGCATC+AGG 0.456455 1_4:+65113990 None:intergenic
TGTTCAATCCACTGAATGAA+TGG 0.457960 1_4:+65114511 None:intergenic
GGCACATCGTATGTGGCTAC+TGG 0.459735 1_4:-65107798 Msa0177820:CDS
CTATGTAGGCCACCTGGATC+GGG 0.461969 1_4:+65113936 None:intergenic
TGCTAAACATGTTAATCCCT+CGG 0.466251 1_4:+65109760 None:intergenic
CCGCCGTCGTCTCCATTCTC+AGG 0.468798 1_4:-65114471 Msa0177820:intron
TTGTATTGCTTAAAGTATCA+AGG 0.475310 1_4:+65114141 None:intergenic
GATGGTGGCCCTGATCCTCC+TGG 0.475492 1_4:-65113966 Msa0177820:CDS
TCAAGTTCCATTGAGTGTGT+TGG 0.479203 1_4:-65108872 Msa0177820:CDS
TGATGGAGCTGTGAGATTAT+GGG 0.479339 1_4:-65107769 Msa0177820:CDS
CCACCATCTGGATTGTCGTC+AGG 0.479833 1_4:+65113981 None:intergenic
TGCGAATCCAACACACTCAA+TGG 0.480617 1_4:+65108865 None:intergenic
GGTGATGGTGATGGTGATGG+TGG 0.481615 1_4:-65113827 Msa0177820:CDS
GAGGATCCTTAATGGAGAAT+GGG 0.481827 1_4:-65113399 Msa0177820:CDS
CATCGTCAGAGGGAACTTCA+TGG 0.482786 1_4:+65114021 None:intergenic
TGATGGAACTGTTAAAATCT+GGG 0.483493 1_4:-65113013 Msa0177820:CDS
CGTGACCATTAAACGACATA+AGG 0.485564 1_4:+65112773 None:intergenic
CACATACGATGTGCCAAGCC+AGG 0.485853 1_4:+65107806 None:intergenic
AAAGAGAACGCACCTGAGAA+TGG 0.489829 1_4:+65114459 None:intergenic
GGTGGTGGTGGTAATGGTGG+TGG 0.491312 1_4:-65113785 Msa0177820:CDS
CATGCCTCCAATTGCAGCCC+AGG 0.491862 1_4:+65108272 None:intergenic
CCTGGATCGGGAGAGCCGCC+AGG 0.491870 1_4:+65113948 None:intergenic
GATGGAACGTTTCTGGCATC+AGG 0.495719 1_4:-65113042 Msa0177820:CDS
AGGAAGAAGTTCATCGTCAG+AGG 0.495964 1_4:+65114010 None:intergenic
GATTCTGTGCATACATTCAC+TGG 0.498391 1_4:-65113752 Msa0177820:CDS
ACTATGTAGGCCACCTGGAT+CGG 0.499980 1_4:+65113935 None:intergenic
CTGAAAATCCATTCATTCAG+TGG 0.503142 1_4:-65114519 Msa0177820:five_prime_UTR
CATAACATAAAACAACAATC+TGG 0.505603 1_4:+65107480 None:intergenic
TATTGCTCTTACTGGTTCTG+TGG 0.506596 1_4:-65109720 Msa0177820:CDS
GTGGTAACAGTTATTGTGTT+GGG 0.509203 1_4:-65113604 Msa0177820:intron
GTGATGACGTAGGATTTCTC+TGG 0.509352 1_4:-65113421 Msa0177820:CDS
AGGAACGCCCGCTGTCCTAA+AGG 0.509497 1_4:+65107512 None:intergenic
CCCAACAGATGAGGCACTTG+TGG 0.512260 1_4:-65113456 Msa0177820:CDS
AATCCTCCTCAGTGTGGATG+TGG 0.512568 1_4:-65112813 Msa0177820:CDS
GTTAATCCCTCGGTATGGTA+TGG 0.513418 1_4:+65109770 None:intergenic
GATGGTGATGGTGATGGTGA+TGG 0.515485 1_4:-65113836 Msa0177820:CDS
GTTAAATCTTACAGTGGCTC+AGG 0.519678 1_4:-65112876 Msa0177820:intron
GCAATGAGGACATTTCCTCT+TGG 0.527044 1_4:+65112847 None:intergenic
CATATTGTGAATATCACTAC+AGG 0.527149 1_4:-65109686 Msa0177820:CDS
CTGGCTTGGCACATCGTATG+TGG 0.530171 1_4:-65107805 Msa0177820:CDS
CTGGGCTGCAATTGGAGGCA+TGG 0.532320 1_4:-65108271 Msa0177820:CDS
AGATTATGGGACAGTCGATC+TGG 0.536579 1_4:-65107756 Msa0177820:CDS
TTAAATATCGCAGATGGTGA+TGG 0.545678 1_4:-65113854 Msa0177820:intron
GCACTTGTGGCAACAGGAGC+TGG 0.547872 1_4:-65113443 Msa0177820:CDS
GAGAATGGAGACGACGGCGG+CGG 0.547883 1_4:+65114474 None:intergenic
ACAATATATACCATTAAGCT+GGG 0.549455 1_4:+65113373 None:intergenic
TGGAACTTGAATGAGAAGGC+AGG 0.549465 1_4:+65108885 None:intergenic
GGCACGTTAGATGGTCCTGA+AGG 0.554207 1_4:-65112970 Msa0177820:CDS
GTTTGATTGCATATGATATG+GGG 0.555606 1_4:-65107588 Msa0177820:three_prime_UTR
TATATGTCCTTTAGGACAGC+GGG 0.559132 1_4:-65107519 Msa0177820:three_prime_UTR
TTAGGGAGAACAATATGTAC+TGG 0.559850 1_4:-65112628 Msa0177820:intron
ACTGTATGACAGTGGTTCCT+GGG 0.563238 1_4:-65108289 Msa0177820:intron
GTGGCTACTGGATCTAATGA+TGG 0.564521 1_4:-65107786 Msa0177820:CDS
CCGAAGCATTTGTGAGCATG+AGG 0.565837 1_4:-65108211 Msa0177820:intron
ATTTCTGCTCTAGAATGTCT+AGG 0.565900 1_4:+65107409 None:intergenic
CAACAATCTGGCTTCTGTAG+AGG 0.567925 1_4:+65107492 None:intergenic
TGTGGTAACAGTTATTGTGT+TGG 0.568611 1_4:-65113605 Msa0177820:CDS
GAGAGCCGCCAGGAGGATCA+GGG 0.578266 1_4:+65113958 None:intergenic
GCACGTTAGATGGTCCTGAA+GGG 0.585298 1_4:-65112969 Msa0177820:CDS
TAATCACGAGTACCTTGTCT+CGG 0.589265 1_4:-65107673 Msa0177820:CDS
CACGTTAGATGGTCCTGAAG+GGG 0.591663 1_4:-65112968 Msa0177820:CDS
AACATGTTAATCCCTCGGTA+TGG 0.591723 1_4:+65109765 None:intergenic
CACAATAACTGTTACCACAT+GGG 0.591966 1_4:+65113609 None:intergenic
CATACATTCACTGGTCATGA+TGG 0.599726 1_4:-65113743 Msa0177820:intron
GATGGTGATGGTGATGGTGA+TGG 0.603742 1_4:-65113842 Msa0177820:CDS
CATGGATAAAATGACCATCT+GGG 0.612989 1_4:-65108253 Msa0177820:CDS
AAATCTTACAGTGGCTCAGG+TGG 0.615875 1_4:-65112873 Msa0177820:intron
GGAACTTGAATGAGAAGGCA+GGG 0.618213 1_4:+65108886 None:intergenic
TGCCTGCAGCCCAACAGATG+AGG 0.618221 1_4:-65113465 Msa0177820:CDS
ACACAATAACTGTTACCACA+TGG 0.621557 1_4:+65113608 None:intergenic
ATCGGGAGTAAAATCACCAC+AGG 0.624969 1_4:+65112738 None:intergenic
ACAATAACTGTTACCACATG+GGG 0.626090 1_4:+65113610 None:intergenic
GTGACATGTTCAACCTGGCT+TGG 0.626776 1_4:-65107819 Msa0177820:CDS
GGTCATCCATACCATACCGA+GGG 0.627020 1_4:-65109776 Msa0177820:CDS
GATCTAAAGAAGCCGAGACA+AGG 0.627111 1_4:+65107661 None:intergenic
AGTTTAGGATTTAGCCACGA+TGG 0.627308 1_4:-65113060 Msa0177820:CDS
GATGCGTCTGGAAATCTGAA+AGG 0.634031 1_4:-65112991 Msa0177820:CDS
ATCGCAGATGGTGATGGTGA+TGG 0.637108 1_4:-65113848 Msa0177820:intron
AGTGTGTTGGATTCGCACCA+AGG 0.639273 1_4:-65108859 Msa0177820:intron
GGAAGAAGTTCATCGTCAGA+GGG 0.639941 1_4:+65114011 None:intergenic
ATGTCGTTTAATGGTCACGC+TGG 0.641738 1_4:-65112769 Msa0177820:CDS
ATGGAGTGACATGTTCAACC+TGG 0.644264 1_4:-65107824 Msa0177820:CDS
GGAGTGCTCTACATCCCAGA+TGG 0.644840 1_4:+65108239 None:intergenic
ATGACGTAGGATTTCTCTGG+AGG 0.647613 1_4:-65113418 Msa0177820:CDS
ACGTTAGATGGTCCTGAAGG+GGG 0.655427 1_4:-65112967 Msa0177820:CDS
CCTGACGACAATCCAGATGG+TGG 0.660117 1_4:-65113981 Msa0177820:CDS
GCACCTGAGAATGGAGACGA+CGG 0.662780 1_4:+65114468 None:intergenic
TTGATGAATCCTCCTCAGTG+TGG 0.662951 1_4:-65112819 Msa0177820:CDS
ATTCATCAAAACCAGCAATG+AGG 0.666974 1_4:+65112833 None:intergenic
AATGTGTCAGAACATTTAGA+GGG 0.671297 1_4:-65107731 Msa0177820:CDS
GAAAGCATTCATGTTGTGCG+AGG 0.671673 1_4:-65112562 Msa0177820:intron
CATGTTCAAATCTCCCCATG+TGG 0.672344 1_4:-65113623 Msa0177820:CDS
ATTCCACATCCACACTGAGG+AGG 0.672492 1_4:+65112810 None:intergenic
CCTGAGAATGGAGACGACGG+CGG 0.675601 1_4:+65114471 None:intergenic
ACAGGAGCTGGTGATGACGT+AGG 0.681696 1_4:-65113431 Msa0177820:CDS
GGATCGGGAGAGCCGCCAGG+AGG 0.683258 1_4:+65113951 None:intergenic
AGGTCATCCATACCATACCG+AGG 0.684577 1_4:-65109777 Msa0177820:CDS
TCAATGGAACTTGAATGAGA+AGG 0.685059 1_4:+65108881 None:intergenic
GTATATGTCCTTTAGGACAG+CGG 0.693297 1_4:-65107520 Msa0177820:three_prime_UTR
GCACCTGACGACAATCCAGA+TGG 0.695484 1_4:-65113984 Msa0177820:CDS
TGGCTCAGGTGGCATCCAAG+AGG 0.696728 1_4:-65112862 Msa0177820:CDS
CACGCTGGTAGTGTGACCTG+TGG 0.697317 1_4:-65112754 Msa0177820:CDS
GGTTGGCGTCTAAAATAACA+CGG 0.705161 1_4:+65114541 None:intergenic
ATGCCAGAAACGTTCCATCG+TGG 0.721913 1_4:+65113046 None:intergenic
GCTATTCCACATCCACACTG+AGG 0.751183 1_4:+65112807 None:intergenic
GGTGGCCCTGATCCTCCTGG+CGG 0.759172 1_4:-65113963 Msa0177820:CDS
TGGCGTCTAAAATAACACGG+AGG 0.847487 1_4:+65114544 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTTAATATTGTAATTTT+GGG + chr1_4:65109372-65109391 None:intergenic 10.0%
!!! TAAACTTAATATTGTAATTT+TGG + chr1_4:65109373-65109392 None:intergenic 10.0%
!!! ATATATTGTTTTCTTATGAA+AGG - chr1_4:65108482-65108501 Msa0177820:intron 15.0%
!!! AAAGTTATGTAACAATTTTT+GGG - chr1_4:65111337-65111356 Msa0177820:intron 15.0%
!! ATAATTTCAAAAATAACTGT+AGG - chr1_4:65111932-65111951 Msa0177820:intron 15.0%
!! ATTCTTTGTATTTAATGTAT+CGG + chr1_4:65111993-65112012 None:intergenic 15.0%
!!! TATCCTATTGTATTTTAATT+TGG - chr1_4:65113943-65113962 Msa0177820:intron 15.0%
!! ATTCCAAATTAAAATACAAT+AGG + chr1_4:65113949-65113968 None:intergenic 15.0%
!! AGAAACGAAAATTGATTAAA+AGG + chr1_4:65107426-65107445 None:intergenic 20.0%
!!! ATTATTTTAAATATCGCAGA+TGG - chr1_4:65107981-65108000 Msa0177820:intron 20.0%
!!! GATATTTTTTAATGCTTTCT+TGG - chr1_4:65108325-65108344 Msa0177820:intron 20.0%
!! TATCTAGTATAATATAAGTG+TGG - chr1_4:65108660-65108679 Msa0177820:intron 20.0%
!! GACATAATATAATATTCTGA+TGG + chr1_4:65109921-65109940 None:intergenic 20.0%
!! TCATCATACTAAGAATTTAA+AGG - chr1_4:65109997-65110016 Msa0177820:intron 20.0%
!! CATCATACTAAGAATTTAAA+GGG - chr1_4:65109998-65110017 Msa0177820:intron 20.0%
!! ATCATACTAAGAATTTAAAG+GGG - chr1_4:65109999-65110018 Msa0177820:intron 20.0%
!! AAGAATTATACGGTTTATTA+AGG + chr1_4:65110067-65110086 None:intergenic 20.0%
!!! AGGTTTTCAAAAGAATTATA+CGG + chr1_4:65110077-65110096 None:intergenic 20.0%
!!! AATCAACCACTTTTTTTTTA+AGG + chr1_4:65110888-65110907 None:intergenic 20.0%
!!! TTATGTTAAACCTTTTGAAT+TGG - chr1_4:65110968-65110987 Msa0177820:intron 20.0%
!! AATTGGTATTCAATGATTTA+TGG - chr1_4:65110985-65111004 Msa0177820:intron 20.0%
!! AATAGATATGTCTTAAGAAA+CGG - chr1_4:65111274-65111293 Msa0177820:intron 20.0%
!! AAAAAAATTGATAAGCAAGA+AGG + chr1_4:65111307-65111326 None:intergenic 20.0%
!!! CAAAGTTATGTAACAATTTT+TGG - chr1_4:65111336-65111355 Msa0177820:intron 20.0%
!! CATATCGTATCATAAAAATA+AGG + chr1_4:65111543-65111562 None:intergenic 20.0%
!! ATCATATCATGTAAATAACA+GGG + chr1_4:65111967-65111986 None:intergenic 20.0%
!! TATCATATCATGTAAATAAC+AGG + chr1_4:65111968-65111987 None:intergenic 20.0%
!!! TTAGTTATGTTTCTAAGATT+TGG - chr1_4:65112302-65112321 Msa0177820:intron 20.0%
!! AATATGTTAGAAACTAATGT+GGG + chr1_4:65112407-65112426 None:intergenic 20.0%
!! AAATATGTTAGAAACTAATG+TGG + chr1_4:65112408-65112427 None:intergenic 20.0%
!!! ATCCCAATTTTAATCATATT+GGG + chr1_4:65112505-65112524 None:intergenic 20.0%
!!! TATCCCAATTTTAATCATAT+TGG + chr1_4:65112506-65112525 None:intergenic 20.0%
!! AAACTCGATTACATTATATA+TGG - chr1_4:65112535-65112554 Msa0177820:intron 20.0%
!!! AAATTGATTAGTCAAAAGTT+TGG - chr1_4:65112613-65112632 Msa0177820:CDS 20.0%
!!! TGCAACTTTATTTATGTAAA+AGG - chr1_4:65112860-65112879 Msa0177820:CDS 20.0%
!!! GCAACTTTATTTATGTAAAA+GGG - chr1_4:65112861-65112880 Msa0177820:CDS 20.0%
!!! ACTATTCATATTTAAGGTTT+AGG + chr1_4:65113370-65113389 None:intergenic 20.0%
!! AAACCTTAAATATGAATAGT+TGG - chr1_4:65113370-65113389 Msa0177820:intron 20.0%
!!! CTCAAAAGTTTTTTGTTTTA+TGG - chr1_4:65114517-65114536 Msa0177820:five_prime_UTR 20.0%
! ACTGTTTATTTCCTTCTATA+AGG - chr1_4:65107580-65107599 Msa0177820:three_prime_UTR 25.0%
! CTGTTTATTTCCTTCTATAA+GGG - chr1_4:65107581-65107600 Msa0177820:three_prime_UTR 25.0%
! TGTTTATTTCCTTCTATAAG+GGG - chr1_4:65107582-65107601 Msa0177820:three_prime_UTR 25.0%
!! GTCTTTGTTTGTCTTATTAT+AGG - chr1_4:65107656-65107675 Msa0177820:CDS 25.0%
!! TTGTATTGCTTAAAGTATCA+AGG + chr1_4:65107703-65107722 None:intergenic 25.0%
! AATCATCAATGTTACTATGT+AGG + chr1_4:65107922-65107941 None:intergenic 25.0%
! ACATAAACAAATAGAGTAGA+AGG + chr1_4:65108128-65108147 None:intergenic 25.0%
! ACAATATATACCATTAAGCT+GGG + chr1_4:65108471-65108490 None:intergenic 25.0%
! AACAATATATACCATTAAGC+TGG + chr1_4:65108472-65108491 None:intergenic 25.0%
! TTATGAAAGGCAAATATTAG+TGG - chr1_4:65108495-65108514 Msa0177820:intron 25.0%
!!! ATATTAGTGGTTAGTTTGTT+AGG - chr1_4:65108508-65108527 Msa0177820:intron 25.0%
!!! TATTAGTGGTTAGTTTGTTA+GGG - chr1_4:65108509-65108528 Msa0177820:intron 25.0%
!! ACAAAAAAGTGCAAGAAATT+AGG - chr1_4:65109565-65109584 Msa0177820:intron 25.0%
! ATGTTATAACCGATAAAGAA+AGG - chr1_4:65109676-65109695 Msa0177820:intron 25.0%
! GATAAATCTCTGATTAGATA+AGG - chr1_4:65109865-65109884 Msa0177820:intron 25.0%
!!! CATTTTGTTTGTGTTTTCTT+GGG + chr1_4:65109943-65109962 None:intergenic 25.0%
!!! ACATTTTGTTTGTGTTTTCT+TGG + chr1_4:65109944-65109963 None:intergenic 25.0%
! AAGAAAACACAAACAAAATG+TGG - chr1_4:65109943-65109962 Msa0177820:intron 25.0%
! TTCTTAGTATGATGAGAATT+GGG + chr1_4:65109992-65110011 None:intergenic 25.0%
! ATTCTTAGTATGATGAGAAT+TGG + chr1_4:65109993-65110012 None:intergenic 25.0%
! TCATACTAAGAATTTAAAGG+GGG - chr1_4:65110000-65110019 Msa0177820:intron 25.0%
! TTTATGTAGATCTATTGTTG+GGG + chr1_4:65110190-65110209 None:intergenic 25.0%
! CTTTATGTAGATCTATTGTT+GGG + chr1_4:65110191-65110210 None:intergenic 25.0%
! ACTTTATGTAGATCTATTGT+TGG + chr1_4:65110192-65110211 None:intergenic 25.0%
! ATCTCAAGCTAAATACATTT+GGG + chr1_4:65110279-65110298 None:intergenic 25.0%
! TATCTCAAGCTAAATACATT+TGG + chr1_4:65110280-65110299 None:intergenic 25.0%
!!! TGTATTTAGCTTGAGATAAA+AGG - chr1_4:65110282-65110301 Msa0177820:intron 25.0%
! TGAAGTAAAACACTTAATGA+TGG + chr1_4:65110314-65110333 None:intergenic 25.0%
! AGGAAAAGTCTATGAATAAT+CGG - chr1_4:65110693-65110712 Msa0177820:intron 25.0%
!!! CCACTTTTTTTTTAAGGTAT+TGG + chr1_4:65110882-65110901 None:intergenic 25.0%
! CCAATACCTTAAAAAAAAAG+TGG - chr1_4:65110879-65110898 Msa0177820:intron 25.0%
! AACATAAACCTTAGTAGAAA+GGG + chr1_4:65110955-65110974 None:intergenic 25.0%
! TAACATAAACCTTAGTAGAA+AGG + chr1_4:65110956-65110975 None:intergenic 25.0%
! TCATTGAATACCAATTCAAA+AGG + chr1_4:65110981-65111000 None:intergenic 25.0%
!! TAACTTGTATCACACAAAAA+AGG - chr1_4:65111251-65111270 Msa0177820:intron 25.0%
! GTTCTTTGTATTTATCGTAA+AGG + chr1_4:65111566-65111585 None:intergenic 25.0%
!!! TTTTTGAAATTATTGCCTTG+AGG + chr1_4:65111925-65111944 None:intergenic 25.0%
!!! TCGTTAACCTTTACTTTTAT+AGG - chr1_4:65112044-65112063 Msa0177820:intron 25.0%
!!! ATTTTTTGTGCATTAGTCTT+TGG - chr1_4:65112238-65112257 Msa0177820:intron 25.0%
!!! TTTTTTGTGCATTAGTCTTT+GGG - chr1_4:65112239-65112258 Msa0177820:intron 25.0%
! CATAACTAAAGACATATGAA+AGG + chr1_4:65112291-65112310 None:intergenic 25.0%
! ATATGTTAGAAACTAATGTG+GGG + chr1_4:65112406-65112425 None:intergenic 25.0%
! TAATCATATTGGGGATAATT+GGG + chr1_4:65112495-65112514 None:intergenic 25.0%
! TTAATCATATTGGGGATAAT+TGG + chr1_4:65112496-65112515 None:intergenic 25.0%
! ATCCCCAATATGATTAAAAT+TGG - chr1_4:65112499-65112518 Msa0177820:intron 25.0%
! TCCCCAATATGATTAAAATT+GGG - chr1_4:65112500-65112519 Msa0177820:intron 25.0%
!!! TCCCAATTTTAATCATATTG+GGG + chr1_4:65112504-65112523 None:intergenic 25.0%
! GATTACATTATATATGGAGA+TGG - chr1_4:65112541-65112560 Msa0177820:intron 25.0%
!! AATGATGTTCTTTTGTAATG+TGG - chr1_4:65112736-65112755 Msa0177820:intron 25.0%
!!! TATAAATTTAGCTTTCTGCT+TGG - chr1_4:65112892-65112911 Msa0177820:intron 25.0%
! ATGCCAACTATTCATATTTA+AGG + chr1_4:65113376-65113395 None:intergenic 25.0%
! TTGGCATAAGTGAAAATTAT+GGG - chr1_4:65113389-65113408 Msa0177820:CDS 25.0%
! GTCTTAATCTAATGATGATT+TGG - chr1_4:65113479-65113498 Msa0177820:CDS 25.0%
!! CATATTTAATTAGGAGTACA+AGG + chr1_4:65113506-65113525 None:intergenic 25.0%
! TTAAGGAACAAAGTTATTGA+GGG + chr1_4:65113531-65113550 None:intergenic 25.0%
! TTTAAGGAACAAAGTTATTG+AGG + chr1_4:65113532-65113551 None:intergenic 25.0%
! TTGTTTGATTGCATATGATA+TGG - chr1_4:65114251-65114270 Msa0177820:intron 25.0%
! TGTTTGATTGCATATGATAT+GGG - chr1_4:65114252-65114271 Msa0177820:intron 25.0%
! CATAACATAAAACAACAATC+TGG + chr1_4:65114364-65114383 None:intergenic 25.0%
!!! TGTTGTTTTATGTTATGTTG+TGG - chr1_4:65114367-65114386 Msa0177820:intron 25.0%
!! AGAAATGTGATTGTCTTTTA+AGG - chr1_4:65114449-65114468 Msa0177820:intron 25.0%
TCTGTGAATTAAGTGGAATT+TGG + chr1_4:65107487-65107506 None:intergenic 30.0%
GAAGGAAATAAACAGTAAAC+TGG + chr1_4:65107576-65107595 None:intergenic 30.0%
TCATCATCACTATGATGATT+TGG + chr1_4:65107734-65107753 None:intergenic 30.0%
ACACAAATCATATATGTGCA+AGG - chr1_4:65108285-65108304 Msa0177820:intron 30.0%
AATACATAGCTATTGATGTG+TGG - chr1_4:65108629-65108648 Msa0177820:intron 30.0%
GTATAATATAAGTGTGGCAT+TGG - chr1_4:65108666-65108685 Msa0177820:intron 30.0%
TTGATGGAACTGTTAAAATC+TGG - chr1_4:65108827-65108846 Msa0177820:intron 30.0%
TGATGGAACTGTTAAAATCT+GGG - chr1_4:65108828-65108847 Msa0177820:intron 30.0%
! GAAACTATCAAAAGCACAAA+AGG + chr1_4:65108933-65108952 None:intergenic 30.0%
TGAAGATAGATTACTACCAT+CGG + chr1_4:65109124-65109143 None:intergenic 30.0%
GTAGTAATCTATCTTCATCT+TGG - chr1_4:65109127-65109146 Msa0177820:intron 30.0%
! TTCTTTTCACTTGATACCTT+AGG - chr1_4:65109195-65109214 Msa0177820:intron 30.0%
! TCTTTTCACTTGATACCTTA+GGG - chr1_4:65109196-65109215 Msa0177820:intron 30.0%
CAACTAACTCCTTTCTTTAT+CGG + chr1_4:65109688-65109707 None:intergenic 30.0%
! CTGCCTTATTACAAAAATGT+CGG - chr1_4:65109757-65109776 Msa0177820:CDS 30.0%
! TGATTAGATAAGGCTTTAGT+TGG - chr1_4:65109875-65109894 Msa0177820:intron 30.0%
TCTGATATGTATCTTTGTGA+TGG - chr1_4:65110150-65110169 Msa0177820:intron 30.0%
ACTGTAAACTTTCCAAGTAT+GGG + chr1_4:65110235-65110254 None:intergenic 30.0%
AACTGTAAACTTTCCAAGTA+TGG + chr1_4:65110236-65110255 None:intergenic 30.0%
! AAGCTAAATACATTTGGGAT+CGG + chr1_4:65110274-65110293 None:intergenic 30.0%
! AGTGTTTTACTTCAATTCCT+AGG - chr1_4:65110320-65110339 Msa0177820:intron 30.0%
! AATGCTTTATTACTCGTAAC+CGG - chr1_4:65110546-65110565 Msa0177820:intron 30.0%
TAGTGCACTTAACAAGTATA+AGG + chr1_4:65110759-65110778 None:intergenic 30.0%
!! ATAATGGGTGTTTAAGGAAA+AGG + chr1_4:65110792-65110811 None:intergenic 30.0%
AATACATGGATAATAGATCC+AGG + chr1_4:65111068-65111087 None:intergenic 30.0%
CATCTACAGAAATGAATACA+TGG + chr1_4:65111082-65111101 None:intergenic 30.0%
CTTGATATTGATAAGGAAAG+TGG + chr1_4:65111379-65111398 None:intergenic 30.0%
TTCCTTATCAATATCAAGCA+AGG - chr1_4:65111381-65111400 Msa0177820:intron 30.0%
AGTGAAATTGAGAAATATCC+TGG - chr1_4:65111417-65111436 Msa0177820:intron 30.0%
GTTGGAGCATATAAATCATA+TGG - chr1_4:65111614-65111633 Msa0177820:intron 30.0%
AATTTGACAAAGTTGTGATG+TGG - chr1_4:65111706-65111725 Msa0177820:intron 30.0%
!! AATTTGTTAAGCACGACTTA+GGG - chr1_4:65111788-65111807 Msa0177820:intron 30.0%
! AGGCAATATAAAATTGACTC+TGG + chr1_4:65111905-65111924 None:intergenic 30.0%
! GTCAATTTTATATTGCCTCA+AGG - chr1_4:65111907-65111926 Msa0177820:intron 30.0%
TGGATGACCTATAAAAGTAA+AGG + chr1_4:65112054-65112073 None:intergenic 30.0%
CATATTGTGAATATCACTAC+AGG - chr1_4:65112155-65112174 Msa0177820:intron 30.0%
!!! TTTTTGTGCATTAGTCTTTG+GGG - chr1_4:65112240-65112259 Msa0177820:intron 30.0%
TTATAAACATAGGTTCGTTC+AGG + chr1_4:65112367-65112386 None:intergenic 30.0%
TGAACGAACCTATGTTTATA+AGG - chr1_4:65112366-65112385 Msa0177820:intron 30.0%
GAACGAACCTATGTTTATAA+GGG - chr1_4:65112367-65112386 Msa0177820:intron 30.0%
TGTCTTTCCCTTATAAACAT+AGG + chr1_4:65112377-65112396 None:intergenic 30.0%
! TAACATATTTTCACGAGTCA+GGG - chr1_4:65112418-65112437 Msa0177820:intron 30.0%
AATCATATTGGGGATAATTG+GGG + chr1_4:65112494-65112513 None:intergenic 30.0%
!! TAATCAACCCAACTGTTTTT+GGG - chr1_4:65112682-65112701 Msa0177820:intron 30.0%
GATAAAACCCAAAAACAGTT+GGG + chr1_4:65112692-65112711 None:intergenic 30.0%
AGATAAAACCCAAAAACAGT+TGG + chr1_4:65112693-65112712 None:intergenic 30.0%
!!! GTTTTTGGGTTTTATCTCAT+CGG - chr1_4:65112696-65112715 Msa0177820:intron 30.0%
AAGGATAAGTGATGAAAGTT+TGG + chr1_4:65112809-65112828 None:intergenic 30.0%
AAATGTTGTATCTTGTTGAC+AGG - chr1_4:65112923-65112942 Msa0177820:intron 30.0%
ATGACTGTAACTCTATAATG+CGG + chr1_4:65113142-65113161 None:intergenic 30.0%
CTACTTCTTTCAAACATCAA+CGG + chr1_4:65113210-65113229 None:intergenic 30.0%
GTTGATGTTTGAAAGAAGTA+GGG - chr1_4:65113209-65113228 Msa0177820:intron 30.0%
TATTTACGAGTCATAACACT+TGG + chr1_4:65113262-65113281 None:intergenic 30.0%
GTTGGCATAAGTGAAAATTA+TGG - chr1_4:65113388-65113407 Msa0177820:CDS 30.0%
TTGAGGGCTCATATTTAATT+AGG + chr1_4:65113515-65113534 None:intergenic 30.0%
! AATCAACACCCATTTTCTTA+TGG - chr1_4:65113780-65113799 Msa0177820:CDS 30.0%
! ATCAACACCCATTTTCTTAT+GGG - chr1_4:65113781-65113800 Msa0177820:CDS 30.0%
GATTTCACCCATAAGAAAAT+GGG + chr1_4:65113791-65113810 None:intergenic 30.0%
TGATTTCACCCATAAGAAAA+TGG + chr1_4:65113792-65113811 None:intergenic 30.0%
! ATTTTCTTATGGGTGAAATC+AGG - chr1_4:65113791-65113810 Msa0177820:CDS 30.0%
AGTCTCACCATATTGAAAAT+GGG + chr1_4:65113841-65113860 None:intergenic 30.0%
AATGTGTCAGAACATTTAGA+GGG - chr1_4:65114110-65114129 Msa0177820:CDS 30.0%
GTTTGATTGCATATGATATG+GGG - chr1_4:65114253-65114272 Msa0177820:intron 30.0%
!!! CTAATCAAAACCCCTTTTTT+TGG - chr1_4:65114287-65114306 Msa0177820:intron 30.0%
! CATAAGGTTTCGAATTTTGA+CGG - chr1_4:65114408-65114427 Msa0177820:intron 30.0%
!!! AGTTTTTTGTTTTATGGCGA+TGG - chr1_4:65114523-65114542 Msa0177820:five_prime_UTR 30.0%
!!! GTTTTTTGTTTTATGGCGAT+GGG - chr1_4:65114524-65114543 Msa0177820:five_prime_UTR 30.0%
!!! GAATGAATGGATTTTCAGGT+TGG + chr1_4:65107320-65107339 None:intergenic 35.0%
!! CACTGAATGAATGGATTTTC+AGG + chr1_4:65107324-65107343 None:intergenic 35.0%
CTGAAAATCCATTCATTCAG+TGG - chr1_4:65107322-65107341 Msa0177820:three_prime_UTR 35.0%
TGTTCAATCCACTGAATGAA+TGG + chr1_4:65107333-65107352 None:intergenic 35.0%
!! AAGAGTGTCTGTGAATTAAG+TGG + chr1_4:65107494-65107513 None:intergenic 35.0%
ATTATCTTGCCCCTTATAGA+AGG + chr1_4:65107594-65107613 None:intergenic 35.0%
TTAAATATCGCAGATGGTGA+TGG - chr1_4:65107987-65108006 Msa0177820:intron 35.0%
ACAATAACTGTTACCACATG+GGG + chr1_4:65108234-65108253 None:intergenic 35.0%
CACAATAACTGTTACCACAT+GGG + chr1_4:65108235-65108254 None:intergenic 35.0%
ACACAATAACTGTTACCACA+TGG + chr1_4:65108236-65108255 None:intergenic 35.0%
TGTGGTAACAGTTATTGTGT+TGG - chr1_4:65108236-65108255 Msa0177820:CDS 35.0%
GTGGTAACAGTTATTGTGTT+GGG - chr1_4:65108237-65108256 Msa0177820:CDS 35.0%
! TATATGTGCAAGGTGTTAGA+AGG - chr1_4:65108295-65108314 Msa0177820:intron 35.0%
CTTTCTTGGATTCTTGTGTA+GGG - chr1_4:65108339-65108358 Msa0177820:intron 35.0%
TTTCTTGGATTCTTGTGTAG+GGG - chr1_4:65108340-65108359 Msa0177820:intron 35.0%
ATGTTTCAACCCATACGATT+GGG - chr1_4:65108597-65108616 Msa0177820:intron 35.0%
!! GTTTGTTATCAATCTTGTGC+AGG - chr1_4:65108739-65108758 Msa0177820:intron 35.0%
ACAGATTCTGTATCGAGTTT+AGG - chr1_4:65108766-65108785 Msa0177820:intron 35.0%
TGAGCCACTGTAAGATTTAA+CGG + chr1_4:65108966-65108985 None:intergenic 35.0%
ATTCATCAAAACCAGCAATG+AGG + chr1_4:65109011-65109030 None:intergenic 35.0%
! GACTTCCTTATGTCGTTTAA+TGG - chr1_4:65109063-65109082 Msa0177820:intron 35.0%
GAAGATAGATTACTACCATC+GGG + chr1_4:65109123-65109142 None:intergenic 35.0%
AGTACATATTGTTCTCCCTA+AGG + chr1_4:65109214-65109233 None:intergenic 35.0%
TTAGGGAGAACAATATGTAC+TGG - chr1_4:65109213-65109232 Msa0177820:intron 35.0%
!!! TTTTGGGTTCCATATTCTCA+AGG + chr1_4:65109253-65109272 None:intergenic 35.0%
AGAATATGGAACCCAAAAAG+TGG - chr1_4:65109255-65109274 Msa0177820:intron 35.0%
!!! GAATGCTTTCTCCACTTTTT+GGG + chr1_4:65109269-65109288 None:intergenic 35.0%
!! TGAATGCTTTCTCCACTTTT+TGG + chr1_4:65109270-65109289 None:intergenic 35.0%
TTAGAAGTTCTCTTGTAGAC+AGG + chr1_4:65109424-65109443 None:intergenic 35.0%
AAAGGAGTTAGTTGTACAGT+AGG - chr1_4:65109694-65109713 Msa0177820:CDS 35.0%
! TGGCCGACATTTTTGTAATA+AGG + chr1_4:65109763-65109782 None:intergenic 35.0%
!! AGAGTAGTTCTAATACTGTG+TGG + chr1_4:65109783-65109802 None:intergenic 35.0%
TCAGAGATTTATCCCTTTGA+GGG + chr1_4:65109858-65109877 None:intergenic 35.0%
ATCAGAGATTTATCCCTTTG+AGG + chr1_4:65109859-65109878 None:intergenic 35.0%
AATGTGGATCTTCTATCATC+CGG - chr1_4:65109959-65109978 Msa0177820:intron 35.0%
! CATATCAGATTTGCTCTACA+AGG + chr1_4:65110139-65110158 None:intergenic 35.0%
! AGAAAGATGTGGATTAAGCT+TGG - chr1_4:65110372-65110391 Msa0177820:intron 35.0%
! ATGCTTTATTACTCGTAACC+GGG - chr1_4:65110547-65110566 Msa0177820:intron 35.0%
GTATACATACAACAACTACC+CGG + chr1_4:65110568-65110587 None:intergenic 35.0%
AGCAAACGGGATGTAAATAT+TGG + chr1_4:65110606-65110625 None:intergenic 35.0%
AATATTTACATCCCGTTTGC+TGG - chr1_4:65110605-65110624 Msa0177820:intron 35.0%
TCCTTAAACACCCATTATGA+TGG - chr1_4:65110794-65110813 Msa0177820:intron 35.0%
ATGTTCACTACCACATAATG+GGG + chr1_4:65110837-65110856 None:intergenic 35.0%
CATGTTCACTACCACATAAT+GGG + chr1_4:65110838-65110857 None:intergenic 35.0%
ACATGTTCACTACCACATAA+TGG + chr1_4:65110839-65110858 None:intergenic 35.0%
GAATCTACAGGAGTAAATAC+AGG + chr1_4:65111046-65111065 None:intergenic 35.0%
TATTTACTCCTGTAGATTCC+TGG - chr1_4:65111047-65111066 Msa0177820:intron 35.0%
TAATAGATCCAGGAATCTAC+AGG + chr1_4:65111058-65111077 None:intergenic 35.0%
TATTCATTTCTGTAGATGCC+TGG - chr1_4:65111084-65111103 Msa0177820:intron 35.0%
TATCATCCAAAACAGAAACC+TGG - chr1_4:65111110-65111129 Msa0177820:intron 35.0%
TCAGAGCTCTTTAGACTATT+TGG - chr1_4:65111160-65111179 Msa0177820:intron 35.0%
CAGAGCTCTTTAGACTATTT+GGG - chr1_4:65111161-65111180 Msa0177820:intron 35.0%
ATTGATAAGCAAGAAGGTTG+TGG + chr1_4:65111301-65111320 None:intergenic 35.0%
GACCTTGCTTGATATTGATA+AGG + chr1_4:65111386-65111405 None:intergenic 35.0%
ATTCATGTCAAATTGCAGCT+TGG - chr1_4:65111465-65111484 Msa0177820:intron 35.0%
!! CAGCTTGGTCGATTTTATAT+AGG - chr1_4:65111480-65111499 Msa0177820:intron 35.0%
TTATATGCTCCAACTTGAGA+GGG + chr1_4:65111608-65111627 None:intergenic 35.0%
TTTATATGCTCCAACTTGAG+AGG + chr1_4:65111609-65111628 None:intergenic 35.0%
! AGAAGCATATTGAGATAGAC+TGG + chr1_4:65111761-65111780 None:intergenic 35.0%
AGTCGTGCTTAACAAATTGA+GGG + chr1_4:65111786-65111805 None:intergenic 35.0%
AAGTCGTGCTTAACAAATTG+AGG + chr1_4:65111787-65111806 None:intergenic 35.0%
!! CAATTTGTTAAGCACGACTT+AGG - chr1_4:65111787-65111806 Msa0177820:intron 35.0%
CTCAATATGAAATGAGCCTA+TGG + chr1_4:65111822-65111841 None:intergenic 35.0%
TGCTAAACATGTTAATCCCT+CGG + chr1_4:65112084-65112103 None:intergenic 35.0%
ACTTCAACTATTGCTCTTAC+TGG - chr1_4:65112113-65112132 Msa0177820:intron 35.0%
TAATGTGAGACTCAACATTC+TGG + chr1_4:65112332-65112351 None:intergenic 35.0%
TTAGAAACTAATGTGGGGAA+GGG + chr1_4:65112401-65112420 None:intergenic 35.0%
! CTAACATATTTTCACGAGTC+AGG - chr1_4:65112417-65112436 Msa0177820:intron 35.0%
! GATTAGTCAAAAGTTTGGCT+TGG - chr1_4:65112618-65112637 Msa0177820:CDS 35.0%
! GTAATCAACCCAACTGTTTT+TGG - chr1_4:65112681-65112700 Msa0177820:intron 35.0%
AAAAGGAACAAACTAGCACA+AGG + chr1_4:65112828-65112847 None:intergenic 35.0%
TCAATGGAACTTGAATGAGA+AGG + chr1_4:65112963-65112982 None:intergenic 35.0%
!! GCTAGTCTTAAAACATACCT+TGG + chr1_4:65113002-65113021 None:intergenic 35.0%
TGACTGTAACTCTATAATGC+GGG + chr1_4:65113141-65113160 None:intergenic 35.0%
CGTTGATGTTTGAAAGAAGT+AGG - chr1_4:65113208-65113227 Msa0177820:intron 35.0%
GTAATTCCATCTCATTCTCA+AGG - chr1_4:65113324-65113343 Msa0177820:intron 35.0%
ATCATTCCTTGAGAATGAGA+TGG + chr1_4:65113333-65113352 None:intergenic 35.0%
TCCTTAAAACTGTATGACAG+TGG - chr1_4:65113544-65113563 Msa0177820:intron 35.0%
! ACCACTGTCATACAGTTTTA+AGG + chr1_4:65113548-65113567 None:intergenic 35.0%
CATGGATAAAATGACCATCT+GGG - chr1_4:65113588-65113607 Msa0177820:intron 35.0%
GAGTCTCACCATATTGAAAA+TGG + chr1_4:65113842-65113861 None:intergenic 35.0%
ATAGGATATGCATGAACATC+AGG + chr1_4:65113931-65113950 None:intergenic 35.0%
GAATGTGTCAGAACATTTAG+AGG - chr1_4:65114109-65114128 Msa0177820:CDS 35.0%
ATGCTTGTGTGCCAAAAAAA+GGG + chr1_4:65114301-65114320 None:intergenic 35.0%
CAAGCATGTATATGTCCTTT+AGG - chr1_4:65114314-65114333 Msa0177820:intron 35.0%
GAGTCAAAAACTGTTGCATA+AGG - chr1_4:65114392-65114411 Msa0177820:intron 35.0%
!! ATTTCTGCTCTAGAATGTCT+AGG + chr1_4:65114435-65114454 None:intergenic 35.0%
! GGTTGGCGTCTAAAATAACA+CGG + chr1_4:65107303-65107322 None:intergenic 40.0%
GGAGAAGAATATGAAGCAGT+GGG + chr1_4:65107530-65107549 None:intergenic 40.0%
AGGAGAAGAATATGAAGCAG+TGG + chr1_4:65107531-65107550 None:intergenic 40.0%
! CAGCTTTGTAGAAGTTGGAA+AGG + chr1_4:65107551-65107570 None:intergenic 40.0%
! TGGTTCAGCTTTGTAGAAGT+TGG + chr1_4:65107556-65107575 None:intergenic 40.0%
GATTCTGTGCATACATTCAC+TGG - chr1_4:65108089-65108108 Msa0177820:intron 40.0%
CATACATTCACTGGTCATGA+TGG - chr1_4:65108098-65108117 Msa0177820:intron 40.0%
! TGTTTTTCCTTTTTCCGTCC+TGG - chr1_4:65108145-65108164 Msa0177820:intron 40.0%
AATCAAACCAGGACGGAAAA+AGG + chr1_4:65108155-65108174 None:intergenic 40.0%
!! TTTTTCCGTCCTGGTTTGAT+TGG - chr1_4:65108154-65108173 Msa0177820:intron 40.0%
!! TTTTCCGTCCTGGTTTGATT+GGG - chr1_4:65108155-65108174 Msa0177820:intron 40.0%
GCTTTCTTGGATTCTTGTGT+AGG - chr1_4:65108338-65108357 Msa0177820:intron 40.0%
! TTTCTCTGGAGGATCCTTAA+TGG - chr1_4:65108434-65108453 Msa0177820:intron 40.0%
GAGGATCCTTAATGGAGAAT+GGG - chr1_4:65108442-65108461 Msa0177820:intron 40.0%
!! AGTGGTTAGTTTGTTAGGGT+AGG - chr1_4:65108513-65108532 Msa0177820:intron 40.0%
!! GTGGTTAGTTTGTTAGGGTA+GGG - chr1_4:65108514-65108533 Msa0177820:intron 40.0%
!! TGGTTAGTTTGTTAGGGTAG+GGG - chr1_4:65108515-65108534 Msa0177820:intron 40.0%
TAGTAGCAGAGATTGAACTC+TGG - chr1_4:65108551-65108570 Msa0177820:intron 40.0%
ACATCGAAGGAGTTCAATGT+AGG + chr1_4:65108581-65108600 None:intergenic 40.0%
GATGTTTCAACCCATACGAT+TGG - chr1_4:65108596-65108615 Msa0177820:intron 40.0%
ATGCAGATACCCAATCGTAT+GGG + chr1_4:65108609-65108628 None:intergenic 40.0%
TATGCAGATACCCAATCGTA+TGG + chr1_4:65108610-65108629 None:intergenic 40.0%
!! TGTGGCATTGGCATGATAAT+TGG - chr1_4:65108678-65108697 Msa0177820:intron 40.0%
! AGTTTAGGATTTAGCCACGA+TGG - chr1_4:65108781-65108800 Msa0177820:intron 40.0%
! AATCTGAAAGGCACGTTAGA+TGG - chr1_4:65108862-65108881 Msa0177820:CDS 40.0%
GTTGCCGTTAAATCTTACAG+TGG - chr1_4:65108959-65108978 Msa0177820:intron 40.0%
GTTAAATCTTACAGTGGCTC+AGG - chr1_4:65108965-65108984 Msa0177820:intron 40.0%
CGTGACCATTAAACGACATA+AGG + chr1_4:65109071-65109090 None:intergenic 40.0%
ACGATGCAACCTTGAGAATA+TGG - chr1_4:65109241-65109260 Msa0177820:intron 40.0%
! GTTTAAGATGCTTCGAACAC+CGG - chr1_4:65109388-65109407 Msa0177820:intron 40.0%
! CTCAAATTCTAGTTGAGGCA+AGG + chr1_4:65109532-65109551 None:intergenic 40.0%
! CGCTTCTCAAATTCTAGTTG+AGG + chr1_4:65109537-65109556 None:intergenic 40.0%
CAGTGATCTTATAGTGAGCT+AGG - chr1_4:65109730-65109749 Msa0177820:CDS 40.0%
ATGAGAATTGGGCATCTAAC+CGG + chr1_4:65109981-65110000 None:intergenic 40.0%
AAAACCTTCTGATACTCCTC+TGG - chr1_4:65110090-65110109 Msa0177820:intron 40.0%
CTACATAGTCTACCCATACT+TGG - chr1_4:65110220-65110239 Msa0177820:intron 40.0%
CATCTTTCTCACAAACTGCT+AGG + chr1_4:65110361-65110380 None:intergenic 40.0%
AGCAGTTTGTGAGAAAGATG+TGG - chr1_4:65110361-65110380 Msa0177820:intron 40.0%
AGTCTTGCATATGCTCTCTT+GGG + chr1_4:65110487-65110506 None:intergenic 40.0%
AAACACACAACAATGGGGTT+TGG + chr1_4:65110516-65110535 None:intergenic 40.0%
ATTGGCAATATCCAGCAAAC+GGG + chr1_4:65110619-65110638 None:intergenic 40.0%
CATTGGCAATATCCAGCAAA+CGG + chr1_4:65110620-65110639 None:intergenic 40.0%
! CAAAGTGAGGAGTATGCTAA+TGG - chr1_4:65110652-65110671 Msa0177820:intron 40.0%
! GGTGACTGACTTTACAATAG+AGG - chr1_4:65110673-65110692 Msa0177820:intron 40.0%
AATCGGAACCTGATTGTTGT+TGG - chr1_4:65110710-65110729 Msa0177820:intron 40.0%
AACGGTTTCCAACAACAATC+AGG + chr1_4:65110721-65110740 None:intergenic 40.0%
CAAGTATAAGGCTCAACTTG+AGG + chr1_4:65110747-65110766 None:intergenic 40.0%
!! GCCATCATAATGGGTGTTTA+AGG + chr1_4:65110798-65110817 None:intergenic 40.0%
ATCTGCAGTGCCATCATAAT+GGG + chr1_4:65110807-65110826 None:intergenic 40.0%
AATCTGCAGTGCCATCATAA+TGG + chr1_4:65110808-65110827 None:intergenic 40.0%
TTATGATGGCACTGCAGATT+AGG - chr1_4:65110808-65110827 Msa0177820:intron 40.0%
TACTGCTTATTGCCTAGACA+AGG - chr1_4:65110911-65110930 Msa0177820:intron 40.0%
ACCTTAGTAGAAAGGGTAGT+TGG + chr1_4:65110948-65110967 None:intergenic 40.0%
!! CTGTTTTGGATGATAGATCC+AGG + chr1_4:65111105-65111124 None:intergenic 40.0%
AGCTCTTTAGACTATTTGGG+CGG - chr1_4:65111164-65111183 Msa0177820:intron 40.0%
CTAGATTTGACAACATTCCC+AGG + chr1_4:65111217-65111236 None:intergenic 40.0%
CTGGGAATGTTGTCAAATCT+AGG - chr1_4:65111215-65111234 Msa0177820:intron 40.0%
!! ACTGATTTGTGTACCTCTCA+AGG - chr1_4:65111658-65111677 Msa0177820:intron 40.0%
GTGTTCACTAAATCCTTGAG+AGG + chr1_4:65111674-65111693 None:intergenic 40.0%
GCTAGGGAGAAGATCAAATT+GGG + chr1_4:65111732-65111751 None:intergenic 40.0%
TGCTAGGGAGAAGATCAAAT+TGG + chr1_4:65111733-65111752 None:intergenic 40.0%
GTCGTGCTTAACAAATTGAG+GGG + chr1_4:65111785-65111804 None:intergenic 40.0%
AGAGAGACAAAGGAGACATA+TGG - chr1_4:65111854-65111873 Msa0177820:intron 40.0%
! CATATGGTGACACCATGTTT+TGG - chr1_4:65111870-65111889 Msa0177820:intron 40.0%
TGGTGTGTAGTTCCAAAACA+TGG + chr1_4:65111885-65111904 None:intergenic 40.0%
AACATGTTAATCCCTCGGTA+TGG + chr1_4:65112079-65112098 None:intergenic 40.0%
!! TATTGCTCTTACTGGTTCTG+TGG - chr1_4:65112121-65112140 Msa0177820:intron 40.0%
GTTAGAAACTAATGTGGGGA+AGG + chr1_4:65112402-65112421 None:intergenic 40.0%
!! TAGTCAAAAGTTTGGCTTGG+TGG - chr1_4:65112621-65112640 Msa0177820:CDS 40.0%
!! TTGGGTTGATTACCTACTCA+AGG + chr1_4:65112674-65112693 None:intergenic 40.0%
TAATGTGGTCTGTGTAGTAC+TGG - chr1_4:65112751-65112770 Msa0177820:CDS 40.0%
TTGCAGCATGCAAAGACAAA+AGG + chr1_4:65112845-65112864 None:intergenic 40.0%
TCAAGTTCCATTGAGTGTGT+TGG - chr1_4:65112969-65112988 Msa0177820:CDS 40.0%
TCATGTCCATGTATGCTTGT+CGG - chr1_4:65113064-65113083 Msa0177820:CDS 40.0%
GCATGGATAAAATGACCATC+TGG - chr1_4:65113587-65113606 Msa0177820:intron 40.0%
TTTGTGAGCATGAGGTTTGT+TGG - chr1_4:65113638-65113657 Msa0177820:intron 40.0%
TTCTTATGGGTGAAATCAGG+TGG - chr1_4:65113794-65113813 Msa0177820:CDS 40.0%
TCTTATGGGTGAAATCAGGT+GGG - chr1_4:65113795-65113814 Msa0177820:CDS 40.0%
! TGTGGAGCCCATTTTCAATA+TGG - chr1_4:65113831-65113850 Msa0177820:CDS 40.0%
TTTCCATTCTCTGAGCAGTA+TGG - chr1_4:65113998-65114017 Msa0177820:CDS 40.0%
! ATGATGGAGCTGTGAGATTA+TGG - chr1_4:65114071-65114090 Msa0177820:CDS 40.0%
TGATGGAGCTGTGAGATTAT+GGG - chr1_4:65114072-65114091 Msa0177820:CDS 40.0%
TAATCACGAGTACCTTGTCT+CGG - chr1_4:65114168-65114187 Msa0177820:intron 40.0%
! GCTCGTGTTTTCGATGTTAA+AGG - chr1_4:65114208-65114227 Msa0177820:intron 40.0%
TGCTTGTGTGCCAAAAAAAG+GGG + chr1_4:65114300-65114319 None:intergenic 40.0%
CATGCTTGTGTGCCAAAAAA+AGG + chr1_4:65114302-65114321 None:intergenic 40.0%
!! GTATATGTCCTTTAGGACAG+CGG - chr1_4:65114321-65114340 Msa0177820:intron 40.0%
!! TATATGTCCTTTAGGACAGC+GGG - chr1_4:65114322-65114341 Msa0177820:intron 40.0%
! TGGCGTCTAAAATAACACGG+AGG + chr1_4:65107300-65107319 None:intergenic 45.0%
AAAGAGAACGCACCTGAGAA+TGG + chr1_4:65107385-65107404 None:intergenic 45.0%
!! AGTGCTGCTTTCACTTGTGT+AGG - chr1_4:65107458-65107477 Msa0177820:three_prime_UTR 45.0%
GGAAGAAGTTCATCGTCAGA+GGG + chr1_4:65107833-65107852 None:intergenic 45.0%
AGGAAGAAGTTCATCGTCAG+AGG + chr1_4:65107834-65107853 None:intergenic 45.0%
ATGTTACTATGTAGGCCACC+TGG + chr1_4:65107914-65107933 None:intergenic 45.0%
!! TTTGATTGGGTTGGGAACCT+AGG - chr1_4:65108168-65108187 Msa0177820:intron 45.0%
! AGAAGCACACTACAAGTCCT+AGG + chr1_4:65108188-65108207 None:intergenic 45.0%
CTTGTAGTGTGCTTCTCTCT+AGG - chr1_4:65108192-65108211 Msa0177820:intron 45.0%
CATGTTCAAATCTCCCCATG+TGG - chr1_4:65108218-65108237 Msa0177820:CDS 45.0%
! GTGATGACGTAGGATTTCTC+TGG - chr1_4:65108420-65108439 Msa0177820:intron 45.0%
ATGACGTAGGATTTCTCTGG+AGG - chr1_4:65108423-65108442 Msa0177820:intron 45.0%
GGAGGATCCTTAATGGAGAA+TGG - chr1_4:65108441-65108460 Msa0177820:intron 45.0%
!! GGTTAGTTTGTTAGGGTAGG+GGG - chr1_4:65108516-65108535 Msa0177820:intron 45.0%
TCGAAGGAGTTCAATGTAGG+AGG + chr1_4:65108578-65108597 None:intergenic 45.0%
! CGTATGGGTTGAAACATCGA+AGG + chr1_4:65108594-65108613 None:intergenic 45.0%
!! CTGGCATCAGGAAGTTTTGA+TGG - chr1_4:65108811-65108830 Msa0177820:intron 45.0%
! GTTAAAATCTGGGATGCGTC+TGG - chr1_4:65108838-65108857 Msa0177820:intron 45.0%
GATGCGTCTGGAAATCTGAA+AGG - chr1_4:65108850-65108869 Msa0177820:intron 45.0%
AAATCTTACAGTGGCTCAGG+TGG - chr1_4:65108968-65108987 Msa0177820:intron 45.0%
GCAATGAGGACATTTCCTCT+TGG + chr1_4:65108997-65109016 None:intergenic 45.0%
AGAGGAAATGTCCTCATTGC+TGG - chr1_4:65108997-65109016 Msa0177820:intron 45.0%
TTGATGAATCCTCCTCAGTG+TGG - chr1_4:65109022-65109041 Msa0177820:intron 45.0%
! ATGTCGTTTAATGGTCACGC+TGG - chr1_4:65109072-65109091 Msa0177820:intron 45.0%
ATCGGGAGTAAAATCACCAC+AGG + chr1_4:65109106-65109125 None:intergenic 45.0%
! TGTGGTGATTTTACTCCCGA+TGG - chr1_4:65109105-65109124 Msa0177820:intron 45.0%
!! GAAAGCATTCATGTTGTGCG+AGG - chr1_4:65109279-65109298 Msa0177820:intron 45.0%
AGTTCTCTTGTAGACAGGAG+AGG + chr1_4:65109419-65109438 None:intergenic 45.0%
GTGAGTGAGCAAAGGAAAGT+TGG - chr1_4:65109823-65109842 Msa0177820:intron 45.0%
TTGGTATCAGACACCCTCAA+AGG - chr1_4:65109842-65109861 Msa0177820:intron 45.0%
TGGTATCAGACACCCTCAAA+GGG - chr1_4:65109843-65109862 Msa0177820:intron 45.0%
TGGTCAAAGAAAGCCACTAG+TGG + chr1_4:65109901-65109920 None:intergenic 45.0%
AATTTACTCCCAACCTCCAG+AGG + chr1_4:65110109-65110128 None:intergenic 45.0%
! CATTTGGGATCGGCTAGAAA+AGG + chr1_4:65110264-65110283 None:intergenic 45.0%
ACACTGGGTGTGAAAAGAGA+GGG - chr1_4:65110433-65110452 Msa0177820:intron 45.0%
GAGTCTTGCATATGCTCTCT+TGG + chr1_4:65110488-65110507 None:intergenic 45.0%
ACCCCATTGTTGTGTGTTTG+AGG - chr1_4:65110517-65110536 Msa0177820:intron 45.0%
CCCTCAAACACACAACAATG+GGG + chr1_4:65110521-65110540 None:intergenic 45.0%
CCCCATTGTTGTGTGTTTGA+GGG - chr1_4:65110518-65110537 Msa0177820:intron 45.0%
GCCCTCAAACACACAACAAT+GGG + chr1_4:65110522-65110541 None:intergenic 45.0%
TGCCCTCAAACACACAACAA+TGG + chr1_4:65110523-65110542 None:intergenic 45.0%
CTTTGACGCTCACTCATCAT+TGG + chr1_4:65110637-65110656 None:intergenic 45.0%
AGGCTCAACTTGAGGCAAAA+CGG + chr1_4:65110739-65110758 None:intergenic 45.0%
! TTCACTACCACATAATGGGG+TGG + chr1_4:65110834-65110853 None:intergenic 45.0%
GCCAACTACCCTTTCTACTA+AGG - chr1_4:65110944-65110963 Msa0177820:intron 45.0%
TACAGGTAGCAGCAACAAGA+GGG + chr1_4:65111029-65111048 None:intergenic 45.0%
ATACAGGTAGCAGCAACAAG+AGG + chr1_4:65111030-65111049 None:intergenic 45.0%
!! AGAGTGCCAGGTTTCTGTTT+TGG + chr1_4:65111119-65111138 None:intergenic 45.0%
GCTCTTTAGACTATTTGGGC+GGG - chr1_4:65111165-65111184 Msa0177820:intron 45.0%
CTCTTTAGACTATTTGGGCG+GGG - chr1_4:65111166-65111185 Msa0177820:intron 45.0%
TTTGACAACATTCCCAGGAC+AGG + chr1_4:65111212-65111231 None:intergenic 45.0%
TTCAACACTCCCTCTCAAGT+TGG - chr1_4:65111596-65111615 Msa0177820:intron 45.0%
GATAGACTGGCACATTGCTA+GGG + chr1_4:65111748-65111767 None:intergenic 45.0%
AGATAGACTGGCACATTGCT+AGG + chr1_4:65111749-65111768 None:intergenic 45.0%
TGTTAAGCACGACTTAGGGT+TGG - chr1_4:65111792-65111811 Msa0177820:intron 45.0%
AGAGTGAGAGAGAGAGACAA+AGG - chr1_4:65111844-65111863 Msa0177820:intron 45.0%
GTTAATCCCTCGGTATGGTA+TGG + chr1_4:65112074-65112093 None:intergenic 45.0%
ACACTATGAGCTCCTTGAGT+AGG - chr1_4:65112659-65112678 Msa0177820:intron 45.0%
! GTGATGAAAGTTTGGAGCCT+TGG + chr1_4:65112801-65112820 None:intergenic 45.0%
GGAACTTGAATGAGAAGGCA+GGG + chr1_4:65112958-65112977 None:intergenic 45.0%
TGGAACTTGAATGAGAAGGC+AGG + chr1_4:65112959-65112978 None:intergenic 45.0%
TGCGAATCCAACACACTCAA+TGG + chr1_4:65112979-65112998 None:intergenic 45.0%
CATGATCCGACAAGCATACA+TGG + chr1_4:65113073-65113092 None:intergenic 45.0%
TGTCGGATCATGCATGTGTA+TGG - chr1_4:65113081-65113100 Msa0177820:CDS 45.0%
ACCGTCAGTGACTTTGTTCA+CGG - chr1_4:65113282-65113301 Msa0177820:intron 45.0%
ACCGTGAACAAAGTCACTGA+CGG + chr1_4:65113286-65113305 None:intergenic 45.0%
AACTGTATGACAGTGGTTCC+TGG - chr1_4:65113551-65113570 Msa0177820:intron 45.0%
ACTGTATGACAGTGGTTCCT+GGG - chr1_4:65113552-65113571 Msa0177820:intron 45.0%
CTCATGCTCACAAATGCTTC+GGG + chr1_4:65113632-65113651 None:intergenic 45.0%
CCTCATGCTCACAAATGCTT+CGG + chr1_4:65113633-65113652 None:intergenic 45.0%
TGTTAGAACTACTCGACGAG+AGG + chr1_4:65113734-65113753 None:intergenic 45.0%
TGGGCTCCACATAAAGTTGT+GGG + chr1_4:65113822-65113841 None:intergenic 45.0%
ATGGGCTCCACATAAAGTTG+TGG + chr1_4:65113823-65113842 None:intergenic 45.0%
ACTCCATACTGCTCAGAGAA+TGG + chr1_4:65114004-65114023 None:intergenic 45.0%
ATGGAGTGACATGTTCAACC+TGG - chr1_4:65114017-65114036 Msa0177820:CDS 45.0%
GTGGCTACTGGATCTAATGA+TGG - chr1_4:65114055-65114074 Msa0177820:CDS 45.0%
AGATTATGGGACAGTCGATC+TGG - chr1_4:65114085-65114104 Msa0177820:CDS 45.0%
GATCTAAAGAAGCCGAGACA+AGG + chr1_4:65114183-65114202 None:intergenic 45.0%
! CAACAATCTGGCTTCTGTAG+AGG + chr1_4:65114352-65114371 None:intergenic 45.0%
!! ATTCAAAATTAATATTAAAA+AGG + chr1_4:65114483-65114502 None:intergenic 5.0%
CATCGTCAGAGGGAACTTCA+TGG + chr1_4:65107823-65107842 None:intergenic 50.0%
ACTATGTAGGCCACCTGGAT+CGG + chr1_4:65107909-65107928 None:intergenic 50.0%
!! ATCGCAGATGGTGATGGTGA+TGG - chr1_4:65107993-65108012 Msa0177820:intron 50.0%
!! GATGGTGATGGTGATGGTGA+TGG - chr1_4:65107999-65108018 Msa0177820:intron 50.0%
!! GATGGTGATGGTGATGGTGA+TGG - chr1_4:65107999-65108018 Msa0177820:intron 50.0%
!! GATGGTGATGGTGATGGTGA+TGG - chr1_4:65107999-65108018 Msa0177820:intron 50.0%
CCAACCCAATCAAACCAGGA+CGG + chr1_4:65108162-65108181 None:intergenic 50.0%
! CGTCCTGGTTTGATTGGGTT+GGG - chr1_4:65108160-65108179 Msa0177820:intron 50.0%
GTTCCCAACCCAATCAAACC+AGG + chr1_4:65108166-65108185 None:intergenic 50.0%
CCACAAGTGCCTCATCTGTT+GGG + chr1_4:65108388-65108407 None:intergenic 50.0%
GGGAAGCCCATTCTCCATTA+AGG + chr1_4:65108451-65108470 None:intergenic 50.0%
! GAATGGGCTTCCCAGCTTAA+TGG - chr1_4:65108458-65108477 Msa0177820:intron 50.0%
TAGCCACGATGGAACGTTTC+TGG - chr1_4:65108792-65108811 Msa0177820:intron 50.0%
ATGCCAGAAACGTTCCATCG+TGG + chr1_4:65108798-65108817 None:intergenic 50.0%
!! GATGGAACGTTTCTGGCATC+AGG - chr1_4:65108799-65108818 Msa0177820:intron 50.0%
GCACGTTAGATGGTCCTGAA+GGG - chr1_4:65108872-65108891 Msa0177820:CDS 50.0%
CACGTTAGATGGTCCTGAAG+GGG - chr1_4:65108873-65108892 Msa0177820:CDS 50.0%
ACGTTAGATGGTCCTGAAGG+GGG - chr1_4:65108874-65108893 Msa0177820:CDS 50.0%
AATCCTCCTCAGTGTGGATG+TGG - chr1_4:65109028-65109047 Msa0177820:intron 50.0%
ATTCCACATCCACACTGAGG+AGG + chr1_4:65109034-65109053 None:intergenic 50.0%
GCTATTCCACATCCACACTG+AGG + chr1_4:65109037-65109056 None:intergenic 50.0%
CTACTCTTTAACATGCCCCC+TGG - chr1_4:65109796-65109815 Msa0177820:intron 50.0%
! AGGCTTTAGTTGGCCACTAG+TGG - chr1_4:65109885-65109904 Msa0177820:intron 50.0%
! GGGGACTGAAATGATGATGC+TGG - chr1_4:65110019-65110038 Msa0177820:intron 50.0%
ACCTTCTGATACTCCTCTGG+AGG - chr1_4:65110093-65110112 Msa0177820:intron 50.0%
!! ACCTCCAGAGGAGTATCAGA+AGG + chr1_4:65110097-65110116 None:intergenic 50.0%
! TCTGATACTCCTCTGGAGGT+TGG - chr1_4:65110097-65110116 Msa0177820:intron 50.0%
! CTGATACTCCTCTGGAGGTT+GGG - chr1_4:65110098-65110117 Msa0177820:intron 50.0%
TGGGATCGGCTAGAAAAGGA+AGG + chr1_4:65110260-65110279 None:intergenic 50.0%
GGTGAGCTGGACAATATCCT+AGG + chr1_4:65110340-65110359 None:intergenic 50.0%
TCACAAACTGCTAGGTGAGC+TGG + chr1_4:65110353-65110372 None:intergenic 50.0%
AAGATGTGCTGTGACGACAC+TGG - chr1_4:65110417-65110436 Msa0177820:intron 50.0%
AGATGTGCTGTGACGACACT+GGG - chr1_4:65110418-65110437 Msa0177820:intron 50.0%
GACACTGGGTGTGAAAAGAG+AGG - chr1_4:65110432-65110451 Msa0177820:intron 50.0%
GCATATGCTCTCTTGGGTCT+AGG + chr1_4:65110481-65110500 None:intergenic 50.0%
GATGAGTGAGCGTCAAAGTG+AGG - chr1_4:65110639-65110658 Msa0177820:intron 50.0%
GATTAGGCCACCCCATTATG+TGG - chr1_4:65110824-65110843 Msa0177820:intron 50.0%
GCAGACAATGTGCCTTGTCT+AGG + chr1_4:65110926-65110945 None:intergenic 50.0%
CAGCAACAAGAGGGTTCCAT+GGG + chr1_4:65111020-65111039 None:intergenic 50.0%
ACAGAAACCTGGCACTCTCA+TGG - chr1_4:65111121-65111140 Msa0177820:intron 50.0%
!! TGTAAGACCATGAGAGTGCC+AGG + chr1_4:65111131-65111150 None:intergenic 50.0%
TTTAGACTATTTGGGCGGGG+AGG - chr1_4:65111169-65111188 Msa0177820:intron 50.0%
TTAGACTATTTGGGCGGGGA+GGG - chr1_4:65111170-65111189 Msa0177820:intron 50.0%
TCTTACGTTCAGACCTGTCC+TGG - chr1_4:65111196-65111215 Msa0177820:intron 50.0%
CTTACGTTCAGACCTGTCCT+GGG - chr1_4:65111197-65111216 Msa0177820:intron 50.0%
GAAGCTATAGTGAGTGTGCC+AGG + chr1_4:65111438-65111457 None:intergenic 50.0%
!! ACTTAGGGTTGGCTCTCCAT+AGG - chr1_4:65111803-65111822 Msa0177820:intron 50.0%
AGGTCATCCATACCATACCG+AGG - chr1_4:65112064-65112083 Msa0177820:intron 50.0%
GGTCATCCATACCATACCGA+GGG - chr1_4:65112065-65112084 Msa0177820:intron 50.0%
!! GCTCTTACTGGTTCTGTGGA+TGG - chr1_4:65112125-65112144 Msa0177820:intron 50.0%
CTGCAAGAGCTGACTAACCA+AGG - chr1_4:65112781-65112800 Msa0177820:CDS 50.0%
AGTGTGTTGGATTCGCACCA+AGG - chr1_4:65112982-65113001 Msa0177820:CDS 50.0%
GCACGAATGCACATAGACAC+AGG + chr1_4:65113038-65113057 None:intergenic 50.0%
CTCACAAATGCTTCGGGCTA+AGG + chr1_4:65113626-65113645 None:intergenic 50.0%
! CCGAAGCATTTGTGAGCATG+AGG - chr1_4:65113630-65113649 Msa0177820:CDS 50.0%
TAGAACTACTCGACGAGAGG+AGG + chr1_4:65113731-65113750 None:intergenic 50.0%
GTGGGTCCCACAACTTTATG+TGG - chr1_4:65113813-65113832 Msa0177820:CDS 50.0%
GTGACATGTTCAACCTGGCT+TGG - chr1_4:65114022-65114041 Msa0177820:CDS 50.0%
GCACCTGAGAATGGAGACGA+CGG + chr1_4:65107376-65107395 None:intergenic 55.0%
GGATTGTCGTCAGGTGCATC+AGG + chr1_4:65107854-65107873 None:intergenic 55.0%
GCACCTGACGACAATCCAGA+TGG - chr1_4:65107857-65107876 Msa0177820:intron 55.0%
CCACCATCTGGATTGTCGTC+AGG + chr1_4:65107863-65107882 None:intergenic 55.0%
CCTGACGACAATCCAGATGG+TGG - chr1_4:65107860-65107879 Msa0177820:intron 55.0%
CTATGTAGGCCACCTGGATC+GGG + chr1_4:65107908-65107927 None:intergenic 55.0%
!! GGTGATGGTGATGGTGATGG+TGG - chr1_4:65108002-65108021 Msa0177820:intron 55.0%
!! GATGGTGATGGTGATGGTGG+TGG - chr1_4:65108017-65108036 Msa0177820:intron 55.0%
!! GATGGTGATGGTGGTGGTGA+TGG - chr1_4:65108023-65108042 Msa0177820:intron 55.0%
! CCGTCCTGGTTTGATTGGGT+TGG - chr1_4:65108159-65108178 Msa0177820:intron 55.0%
! CCCAACAGATGAGGCACTTG+TGG - chr1_4:65108385-65108404 Msa0177820:intron 55.0%
GCCACAAGTGCCTCATCTGT+TGG + chr1_4:65108389-65108408 None:intergenic 55.0%
! GATGAGGCACTTGTGGCAAC+AGG - chr1_4:65108392-65108411 Msa0177820:intron 55.0%
! ACAGGAGCTGGTGATGACGT+AGG - chr1_4:65108410-65108429 Msa0177820:intron 55.0%
!! AGTTTGTTAGGGTAGGGGGC+TGG - chr1_4:65108520-65108539 Msa0177820:intron 55.0%
GGCACGTTAGATGGTCCTGA+AGG - chr1_4:65108871-65108890 Msa0177820:CDS 55.0%
CTTACCTCAACTCCCCCTTC+AGG + chr1_4:65108889-65108908 None:intergenic 55.0%
AGGGGGAGTTGAGGTAAGAC+TGG - chr1_4:65108891-65108910 Msa0177820:CDS 55.0%
!! GTAGACAGGAGAGGTGTTGC+CGG + chr1_4:65109410-65109429 None:intergenic 55.0%
TCTTTAACATGCCCCCTGGC+AGG - chr1_4:65109800-65109819 Msa0177820:intron 55.0%
CTTTAACATGCCCCCTGGCA+GGG - chr1_4:65109801-65109820 Msa0177820:intron 55.0%
TTTGCTCACTCACCCTGCCA+GGG + chr1_4:65109816-65109835 None:intergenic 55.0%
CAACAAGAGGGTTCCATGGG+CGG + chr1_4:65111017-65111036 None:intergenic 55.0%
GCAGCAACAAGAGGGTTCCA+TGG + chr1_4:65111021-65111040 None:intergenic 55.0%
TAGACTATTTGGGCGGGGAG+GGG - chr1_4:65111171-65111190 Msa0177820:intron 55.0%
AGTGGTTCCTGGGCTGCAAT+TGG - chr1_4:65113562-65113581 Msa0177820:intron 55.0%
! GGAGTGCTCTACATCCCAGA+TGG + chr1_4:65113605-65113624 None:intergenic 55.0%
CACATACGATGTGCCAAGCC+AGG + chr1_4:65114038-65114057 None:intergenic 55.0%
!! CTGGCTTGGCACATCGTATG+TGG - chr1_4:65114036-65114055 Msa0177820:CDS 55.0%
GGCACATCGTATGTGGCTAC+TGG - chr1_4:65114043-65114062 Msa0177820:CDS 55.0%
CCTGAGAATGGAGACGACGG+CGG + chr1_4:65107373-65107392 None:intergenic 60.0%
!! GGTGATGGTGGTGGTGATGG+TGG - chr1_4:65108026-65108045 Msa0177820:intron 60.0%
!! GATGGTGGTGGTGATGGTGG+TGG - chr1_4:65108029-65108048 Msa0177820:intron 60.0%
!! GGTGGTGGTGGTGGTGGTAA+TGG - chr1_4:65108050-65108069 Msa0177820:intron 60.0%
!! GGTGGTGGTGGTGGTAATGG+TGG - chr1_4:65108053-65108072 Msa0177820:intron 60.0%
!! GGTGGTGGTGGTAATGGTGG+TGG - chr1_4:65108056-65108075 Msa0177820:intron 60.0%
TGCCTGCAGCCCAACAGATG+AGG - chr1_4:65108376-65108395 Msa0177820:intron 60.0%
TGCCTCATCTGTTGGGCTGC+AGG + chr1_4:65108381-65108400 None:intergenic 60.0%
GCACTTGTGGCAACAGGAGC+TGG - chr1_4:65108398-65108417 Msa0177820:intron 60.0%
TGGTCCTGAAGGGGGAGTTG+AGG - chr1_4:65108882-65108901 Msa0177820:CDS 60.0%
TGGCTCAGGTGGCATCCAAG+AGG - chr1_4:65108979-65108998 Msa0177820:intron 60.0%
! CACGCTGGTAGTGTGACCTG+TGG - chr1_4:65109087-65109106 Msa0177820:intron 60.0%
TTGCTCACTCACCCTGCCAG+GGG + chr1_4:65109815-65109834 None:intergenic 60.0%
CTTTGCTCACTCACCCTGCC+AGG + chr1_4:65109817-65109836 None:intergenic 60.0%
CTGGCAGGGTGAGTGAGCAA+AGG - chr1_4:65109815-65109834 Msa0177820:intron 60.0%
TTTATGGAGCCCTCCGCCCA+TGG - chr1_4:65111001-65111020 Msa0177820:intron 60.0%
AAGAGGGTTCCATGGGCGGA+GGG + chr1_4:65111013-65111032 None:intergenic 60.0%
AGACTATTTGGGCGGGGAGG+GGG - chr1_4:65111172-65111191 Msa0177820:intron 60.0%
GGTTCCTGGGCTGCAATTGG+AGG - chr1_4:65113565-65113584 Msa0177820:intron 60.0%
CATGCCTCCAATTGCAGCCC+AGG + chr1_4:65113572-65113591 None:intergenic 60.0%
CTGGGCTGCAATTGGAGGCA+TGG - chr1_4:65113570-65113589 Msa0177820:intron 60.0%
AGGAACGCCCGCTGTCCTAA+AGG + chr1_4:65114332-65114351 None:intergenic 60.0%
GAGAATGGAGACGACGGCGG+CGG + chr1_4:65107370-65107389 None:intergenic 65.0%
CCGCCGTCGTCTCCATTCTC+AGG - chr1_4:65107370-65107389 Msa0177820:three_prime_UTR 65.0%
GGAGGATCAGGGCCACCATC+TGG + chr1_4:65107875-65107894 None:intergenic 65.0%
! GATGGTGGCCCTGATCCTCC+TGG - chr1_4:65107875-65107894 Msa0177820:intron 65.0%
GAGAGCCGCCAGGAGGATCA+GGG + chr1_4:65107886-65107905 None:intergenic 65.0%
!! GGTGGTGGTGATGGTGGTGG+TGG - chr1_4:65108032-65108051 Msa0177820:intron 65.0%
!! GGTGGTGATGGTGGTGGTGG+TGG - chr1_4:65108035-65108054 Msa0177820:intron 65.0%
!! GGTGATGGTGGTGGTGGTGG+TGG - chr1_4:65108038-65108057 Msa0177820:intron 65.0%
!! GATGGTGGTGGTGGTGGTGG+TGG - chr1_4:65108041-65108060 Msa0177820:intron 65.0%
TGCTCACTCACCCTGCCAGG+GGG + chr1_4:65109814-65109833 None:intergenic 65.0%
CAAGAGGGTTCCATGGGCGG+AGG + chr1_4:65111014-65111033 None:intergenic 65.0%
GGTGGCCCTGATCCTCCTGG+CGG - chr1_4:65107878-65107897 Msa0177820:intron 70.0%
GGAGAGCCGCCAGGAGGATC+AGG + chr1_4:65107887-65107906 None:intergenic 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - chr1_4:65108044-65108063 Msa0177820:intron 70.0%
CGACGGCGGCGGCTGCTGTA+TGG + chr1_4:65107359-65107378 None:intergenic 75.0%
GGATCGGGAGAGCCGCCAGG+AGG + chr1_4:65107893-65107912 None:intergenic 75.0%
CCTGGATCGGGAGAGCCGCC+AGG + chr1_4:65107896-65107915 None:intergenic 75.0%
CCTGGCGGCTCTCCCGATCC+AGG - chr1_4:65107893-65107912 Msa0177820:intron 75.0%
GGCGGCTCTCCCGATCCAGG+TGG - chr1_4:65107896-65107915 Msa0177820:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 65107286 65114577 65107286 ID=Msa0177820;Name=Msa0177820
chr1_4 mRNA 65107286 65114577 65107286 ID=Msa0177820-mRNA-1;Parent=Msa0177820;Name=Msa0177820-mRNA-1;_AED=0.12;_eAED=0.12;_QI=150|0.81|0.83|0.91|0.90|0.83|12|337|446
chr1_4 exon 65107286 65107847 65107286 ID=Msa0177820-mRNA-1:exon:21200;Parent=Msa0177820-mRNA-1
chr1_4 exon 65108212 65108299 65108212 ID=Msa0177820-mRNA-1:exon:21199;Parent=Msa0177820-mRNA-1
chr1_4 exon 65108860 65108918 65108860 ID=Msa0177820-mRNA-1:exon:21198;Parent=Msa0177820-mRNA-1
chr1_4 exon 65109682 65109797 65109682 ID=Msa0177820-mRNA-1:exon:21197;Parent=Msa0177820-mRNA-1
chr1_4 exon 65112563 65112646 65112563 ID=Msa0177820-mRNA-1:exon:21196;Parent=Msa0177820-mRNA-1
chr1_4 exon 65112737 65112884 65112737 ID=Msa0177820-mRNA-1:exon:21195;Parent=Msa0177820-mRNA-1
chr1_4 exon 65112960 65113102 65112960 ID=Msa0177820-mRNA-1:exon:21194;Parent=Msa0177820-mRNA-1
chr1_4 exon 65113384 65113503 65113384 ID=Msa0177820-mRNA-1:exon:21193;Parent=Msa0177820-mRNA-1
chr1_4 exon 65113605 65113649 65113605 ID=Msa0177820-mRNA-1:exon:21192;Parent=Msa0177820-mRNA-1
chr1_4 exon 65113744 65113863 65113744 ID=Msa0177820-mRNA-1:exon:21191;Parent=Msa0177820-mRNA-1
chr1_4 exon 65113949 65114185 65113949 ID=Msa0177820-mRNA-1:exon:21190;Parent=Msa0177820-mRNA-1
chr1_4 exon 65114472 65114577 65114472 ID=Msa0177820-mRNA-1:exon:21189;Parent=Msa0177820-mRNA-1
chr1_4 five_prime_UTR 65114472 65114577 65114472 ID=Msa0177820-mRNA-1:five_prime_utr;Parent=Msa0177820-mRNA-1
chr1_4 five_prime_UTR 65114142 65114185 65114142 ID=Msa0177820-mRNA-1:five_prime_utr;Parent=Msa0177820-mRNA-1
chr1_4 CDS 65113949 65114141 65113949 ID=Msa0177820-mRNA-1:cds;Parent=Msa0177820-mRNA-1
chr1_4 CDS 65113744 65113863 65113744 ID=Msa0177820-mRNA-1:cds;Parent=Msa0177820-mRNA-1
chr1_4 CDS 65113605 65113649 65113605 ID=Msa0177820-mRNA-1:cds;Parent=Msa0177820-mRNA-1
chr1_4 CDS 65113384 65113503 65113384 ID=Msa0177820-mRNA-1:cds;Parent=Msa0177820-mRNA-1
chr1_4 CDS 65112960 65113102 65112960 ID=Msa0177820-mRNA-1:cds;Parent=Msa0177820-mRNA-1
chr1_4 CDS 65112737 65112884 65112737 ID=Msa0177820-mRNA-1:cds;Parent=Msa0177820-mRNA-1
chr1_4 CDS 65112563 65112646 65112563 ID=Msa0177820-mRNA-1:cds;Parent=Msa0177820-mRNA-1
chr1_4 CDS 65109682 65109797 65109682 ID=Msa0177820-mRNA-1:cds;Parent=Msa0177820-mRNA-1
chr1_4 CDS 65108860 65108918 65108860 ID=Msa0177820-mRNA-1:cds;Parent=Msa0177820-mRNA-1
chr1_4 CDS 65108212 65108299 65108212 ID=Msa0177820-mRNA-1:cds;Parent=Msa0177820-mRNA-1
chr1_4 CDS 65107623 65107847 65107623 ID=Msa0177820-mRNA-1:cds;Parent=Msa0177820-mRNA-1
chr1_4 three_prime_UTR 65107286 65107622 65107286 ID=Msa0177820-mRNA-1:three_prime_utr;Parent=Msa0177820-mRNA-1
Gene Sequence

>Msa0177820

ATGAGTGATCCAAATCATCATAGTGATGATGATGATGAATTCAACAACGATGAAGACGAAGACAACAATGATGTTTTCATTGATGACTCTGATATCATCCATGAAGTTCCCTCTGACGATGAACTTCTTCCTGATGCACCTGACGACAATCCAGATGGTGGCCCTGATCCTCCTGGCGGCTCTCCCGATCCAGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGGTAATGGTGGTGGTTATGACGATGATTCTGTGCATACATTCACTGGTCATGATGGTTTCATGTTCAAATCTCCCCATGTGGTAACAGTTATTGTGTTGGGGGAGTTATATACAGTTGCCTGCAGCCCAACAGATGAGGCACTTGTGGCAACAGGAGCTGGTGATGACGTAGGATTTCTCTGGAGGATCCTTAATGGAGAATGGGCTTCCCAGCTTAATGGTCATACAGATTCTGTATCGAGTTTAGGATTTAGCCACGATGGAACGTTTCTGGCATCAGGAAGTTTTGATGGAACTGTTAAAATCTGGGATGCGTCTGGAAATCTGAAAGGCACGTTAGATGGTCCTGAAGGGGGAGTTGAGTGGCTCAGGTGGCATCCAAGAGGAAATGTCCTCATTGCTGGTTTTGATGAATCCTCCTCAGTGTGGATGTGGAATAGCAATCTTGACTTCCTTATGTCGTTTAATGGTCACGCTGGTAGTGTGACCTGTGGTGATTTTACTCCCGATGGGAGAACAATATGTACTGGTTCTGACGATGCAACCTTGAGAATATGGAACCCAAAAAGTGGAGAAAGCATTCATGTTGTGCGAGGTCATCCATACCATACCGAGGGATTAACATGTTTAGCAATAAATTCAACTTCAACTATTGCTCTTACTGGTTCTGTGGATGGATCTGTTCATATTGTGAATATCACTACAGGAAGAGTTGTTAGTACCCTGCCTTCTCATTCAAGTTCCATTGAGTGTGTTGGATTCGCACCAAGTGGTTCCTGGGCTGCAATTGGAGGCATGGATAAAATGACCATCTGGGATGTAGAGCACTCCTTAGCCCGAAGCATTTGTGAGCATGAGTATGGAGTGACATGTTCAACCTGGCTTGGCACATCGTATGTGGCTACTGGATCTAATGATGGAGCTGTGAGATTATGGGACAGTCGATCTGGTGAATGTGTCAGAACATTTAGAGGGCACTCTGAAAGCATTCAATCTCTTTCTTTGTCTGCTAATCACGAGTACCTTGTCTCGGCTTCTTTAGATCATACAGCTCGTGTTTTCGATGTTAAAGGAGTTTGTTAA
Protein sequence

>Msa0177820

MSDPNHHSDDDDEFNNDEDEDNNDVFIDDSDIIHEVPSDDELLPDAPDDNPDGGPDPPGGSPDPDGDGDGDGDGDGGGDGGGGGGGGNGGGYDDDSVHTFTGHDGFMFKSPHVVTVIVLGELYTVACSPTDEALVATGAGDDVGFLWRILNGEWASQLNGHTDSVSSLGFSHDGTFLASGSFDGTVKIWDASGNLKGTLDGPEGGVEWLRWHPRGNVLIAGFDESSSVWMWNSNLDFLMSFNGHAGSVTCGDFTPDGRTICTGSDDATLRIWNPKSGESIHVVRGHPYHTEGLTCLAINSTSTIALTGSVDGSVHIVNITTGRVVSTLPSHSSSIECVGFAPSGSWAAIGGMDKMTIWDVEHSLARSICEHEYGVTCSTWLGTSYVATGSNDGAVRLWDSRSGECVRTFRGHSESIQSLSLSANHEYLVSASLDHTARVFDVKGVC*