AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1389320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1389320 MtrunA17_Chr1g0200901 89.401 434 9 3 4 437 11 407 0.0 752
Msa1389320 MtrunA17_Chr7g0271371 83.654 104 17 0 334 437 18 121 1.34e-56 182
Msa1389320 MtrunA17_Chr1g0185501 28.378 296 193 11 149 431 23 312 8.69e-30 117
Msa1389320 MtrunA17_Chr1g0185501 27.778 180 122 5 113 286 114 291 4.37e-17 81.6
Msa1389320 MtrunA17_Chr1g0185501 22.566 226 173 2 121 344 79 304 2.30e-15 76.6
Msa1389320 MtrunA17_Chr1g0185501 33.058 121 78 2 317 434 21 141 2.93e-15 76.3
Msa1389320 MtrunA17_Chr4g0067151 25.902 305 202 11 146 430 20 320 4.42e-25 105
Msa1389320 MtrunA17_Chr4g0067151 25.431 232 156 9 84 307 98 320 5.52e-17 81.6
Msa1389320 MtrunA17_Chr4g0067151 23.504 234 174 4 121 349 88 321 8.38e-15 75.1
Msa1389320 MtrunA17_Chr5g0401671 26.710 307 155 9 112 351 249 552 2.85e-24 105
Msa1389320 MtrunA17_Chr5g0401671 27.193 228 145 6 227 434 234 460 1.85e-12 69.3
Msa1389320 MtrunA17_Chr4g0053651 25.850 294 153 7 124 352 243 536 5.85e-23 101
Msa1389320 MtrunA17_Chr5g0401661 25.243 309 159 9 112 351 337 642 4.60e-22 99.0
Msa1389320 MtrunA17_Chr5g0401661 25.705 319 196 9 149 433 331 642 3.40e-20 93.2
Msa1389320 MtrunA17_Chr5g0401661 26.522 230 146 6 227 434 322 550 3.23e-11 65.5
Msa1389320 MtrunA17_Chr1g0176241 26.923 338 214 12 113 434 122 442 1.24e-20 94.0
Msa1389320 MtrunA17_Chr1g0176241 26.923 208 141 4 231 431 114 317 2.55e-19 90.1
Msa1389320 MtrunA17_Chr1g0176241 26.877 253 160 10 107 349 244 481 6.75e-15 76.6
Msa1389320 MtrunA17_Chr7g0253861 25.084 299 206 6 149 433 51 345 1.08e-19 89.7
Msa1389320 MtrunA17_Chr7g0253861 25.238 210 150 4 229 434 48 254 2.06e-15 77.0
Msa1389320 MtrunA17_Chr3g0093681 27.969 261 178 7 137 391 298 554 1.37e-19 91.3
Msa1389320 MtrunA17_Chr3g0093681 27.174 276 193 5 161 431 280 552 4.92e-19 89.7
Msa1389320 MtrunA17_Chr1g0172501 27.969 261 178 7 137 391 298 554 1.37e-19 91.3
Msa1389320 MtrunA17_Chr1g0172501 27.174 276 193 5 161 431 280 552 3.68e-19 90.1
Msa1389320 MtrunA17_Chr5g0405851 24.252 301 205 7 151 431 152 449 2.22e-18 87.0
Msa1389320 MtrunA17_Chr5g0405851 23.381 278 184 9 137 391 180 451 9.10e-13 69.7
Msa1389320 MtrunA17_Chr3g0136971 25.430 291 191 7 149 433 346 616 2.96e-18 87.4
Msa1389320 MtrunA17_Chr3g0136971 27.602 221 151 6 149 365 415 630 3.05e-15 78.2
Msa1389320 MtrunA17_Chr2g0295791 27.586 261 159 7 149 394 166 411 6.88e-18 85.9
Msa1389320 MtrunA17_Chr2g0295791 25.862 232 161 6 211 435 142 369 5.46e-16 80.1
Msa1389320 MtrunA17_Chr2g0295791 29.775 178 119 6 110 284 170 344 2.83e-14 74.7
Msa1389320 MtrunA17_Chr3g0095501 25.329 304 198 10 149 434 266 558 3.14e-17 84.0
Msa1389320 MtrunA17_Chr6g0448921 24.561 228 164 5 125 349 31 253 9.37e-17 82.8
Msa1389320 MtrunA17_Chr6g0448921 34.194 155 95 4 121 271 69 220 4.23e-16 80.9
Msa1389320 MtrunA17_Chr6g0448921 25.701 214 144 6 229 434 9 215 4.23e-15 77.8
Msa1389320 MtrunA17_Chr4g0058091 25.185 270 187 9 148 407 225 489 2.58e-16 80.9
Msa1389320 MtrunA17_Chr4g0058091 22.581 279 117 8 110 341 272 498 6.73e-11 64.3
Msa1389320 MtrunA17_Chr4g0070791 24.823 282 190 7 118 383 25 300 3.79e-16 79.0
Msa1389320 MtrunA17_Chr2g0284241 24.837 306 181 9 157 431 12 299 1.94e-15 77.0
Msa1389320 MtrunA17_Chr4g0035611 23.973 292 198 9 147 432 3 276 4.46e-15 77.8
Msa1389320 MtrunA17_Chr8g0383711 23.102 303 194 8 149 431 14 297 6.49e-15 75.1
Msa1389320 MtrunA17_Chr1g0197551 23.288 292 200 9 147 432 3 276 7.18e-15 77.4
Msa1389320 MtrunA17_Chr1g0185891 25.347 288 192 14 120 390 303 584 1.84e-14 75.5
Msa1389320 MtrunA17_Chr4g0057141 25.347 288 192 14 120 390 364 645 1.87e-14 75.5
Msa1389320 MtrunA17_Chr2g0281451 24.670 227 165 4 125 349 30 252 1.90e-14 75.9
Msa1389320 MtrunA17_Chr2g0281451 32.768 177 105 5 123 288 70 243 2.75e-14 75.5
Msa1389320 MtrunA17_Chr2g0281451 26.047 215 144 6 229 435 8 215 5.87e-11 64.7
Msa1389320 MtrunA17_Chr8g0392701 22.333 300 180 7 112 401 16 272 4.67e-14 72.8
Msa1389320 MtrunA17_Chr4g0069701 24.507 355 243 11 98 432 345 694 4.69e-14 74.7
Msa1389320 MtrunA17_Chr3g0103361 25.385 260 182 7 146 397 12 267 4.80e-14 72.8
Msa1389320 MtrunA17_Chr3g0138311 25.786 318 208 9 128 431 593 896 1.85e-13 72.8
Msa1389320 MtrunA17_Chr3g0116561 24.074 270 190 7 148 407 220 484 2.35e-13 72.0
Msa1389320 MtrunA17_Chr1g0171711 24.839 310 213 11 89 390 489 786 2.48e-13 72.0
Msa1389320 MtrunA17_Chr2g0331981 22.441 254 185 7 186 431 7 256 3.53e-13 71.6
Msa1389320 MtrunA17_Chr2g0307941 26.407 231 161 4 149 371 58 287 3.74e-13 71.6
Msa1389320 MtrunA17_Chr4g0004241 21.429 294 188 8 141 431 3 256 3.98e-13 71.6
Msa1389320 MtrunA17_Chr4g0020641 36.893 103 55 2 116 218 4 96 1.96e-12 63.2
Msa1389320 MtrunA17_Chr8g0352821 21.071 280 175 6 149 425 179 415 2.39e-12 68.9
Msa1389320 MtrunA17_Chr8g0352821 21.053 209 159 4 231 436 178 383 6.64e-12 67.8
Msa1389320 MtrunA17_Chr7g0266251 30.952 168 101 6 113 266 72 238 2.44e-12 67.8
Msa1389320 MtrunA17_Chr2g0292301 30.337 178 119 4 99 275 199 372 3.35e-12 68.2
Msa1389320 MtrunA17_Chr2g0308391 25.110 227 136 10 235 433 125 345 6.96e-12 67.0
Msa1389320 MtrunA17_Chr8g0390861 25.649 308 189 12 149 431 853 1145 7.96e-12 67.8
Msa1389320 MtrunA17_Chr1g0183051 24.513 359 212 14 83 431 194 503 9.50e-12 67.0
Msa1389320 MtrunA17_Chr3g0099061 21.201 283 140 7 161 435 222 429 2.63e-11 65.5
Msa1389320 MtrunA17_Chr2g0331961 21.453 289 182 7 148 432 12 259 2.73e-11 64.3
Msa1389320 MtrunA17_Chr7g0237271 22.054 331 233 9 68 390 471 784 3.03e-11 65.5
Msa1389320 MtrunA17_Chr1g0168391 26.201 229 153 4 125 344 238 459 3.36e-11 65.1
Msa1389320 MtrunA17_Chr7g0237241 22.054 331 233 9 68 390 462 775 3.68e-11 65.5
Msa1389320 MtrunA17_Chr3g0144511 24.684 316 206 10 149 435 61 373 4.05e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1389320 AT1G71840.1 52.204 431 151 8 9 432 16 398 1.13e-147 426
Msa1389320 AT4G02730.1 27.027 296 200 8 149 432 39 330 3.84e-26 108
Msa1389320 AT4G02730.1 25.926 270 186 9 175 435 25 289 1.80e-20 92.4
Msa1389320 AT4G02730.1 25.641 195 136 6 100 286 115 308 7.31e-16 79.0
Msa1389320 AT4G02730.1 24.171 211 116 4 229 437 36 204 5.68e-13 70.1
Msa1389320 AT3G49660.1 24.590 305 208 8 146 434 17 315 1.02e-25 107
Msa1389320 AT3G49660.1 28.042 189 126 7 125 307 127 311 3.96e-19 88.2
Msa1389320 AT3G49660.1 24.138 232 173 3 121 349 81 312 4.74e-16 79.3
Msa1389320 AT5G67320.1 26.730 318 194 8 149 434 261 571 5.37e-23 102
Msa1389320 AT5G67320.1 22.843 394 198 8 75 403 230 582 3.86e-21 96.7
Msa1389320 AT2G41500.1 25.180 278 196 6 160 430 262 534 8.94e-20 92.0
Msa1389320 AT2G41500.1 26.613 248 173 7 149 391 294 537 1.46e-17 85.5
Msa1389320 AT2G41500.2 25.180 278 196 6 160 430 262 534 8.94e-20 92.0
Msa1389320 AT2G41500.2 26.613 248 173 7 149 391 294 537 1.46e-17 85.5
Msa1389320 AT5G52820.1 27.353 340 204 13 116 434 115 432 4.48e-19 89.7
Msa1389320 AT5G52820.1 28.302 212 136 7 230 431 103 308 1.79e-17 84.7
Msa1389320 AT5G52820.1 25.523 239 145 8 125 350 254 472 1.07e-14 76.3
Msa1389320 AT2G43770.1 24.399 291 202 7 149 425 49 335 3.95e-18 85.9
Msa1389320 AT2G43770.1 26.667 210 147 4 229 434 46 252 1.61e-15 77.8
Msa1389320 AT2G32700.7 24.615 325 226 11 73 390 494 806 5.85e-18 87.0
Msa1389320 AT2G32700.6 24.615 325 226 11 73 390 473 785 6.53e-18 87.0
Msa1389320 AT2G32700.2 24.615 325 226 11 73 390 475 787 6.72e-18 87.0
Msa1389320 AT2G32700.5 24.615 325 226 11 73 390 475 787 6.72e-18 87.0
Msa1389320 AT2G32700.1 24.615 325 226 11 73 390 475 787 6.72e-18 87.0
Msa1389320 AT2G32700.4 24.615 325 226 11 73 390 475 787 6.72e-18 87.0
Msa1389320 AT2G32700.3 24.615 325 226 11 73 390 475 787 6.72e-18 87.0
Msa1389320 AT4G15900.1 25.806 217 155 3 222 435 162 375 1.61e-17 85.1
Msa1389320 AT4G15900.1 25.092 271 190 8 149 414 172 434 7.78e-15 76.6
Msa1389320 AT4G15900.1 29.609 179 120 6 110 285 176 351 7.01e-13 70.9
Msa1389320 AT3G16650.1 25.463 216 156 3 222 435 156 368 6.70e-17 83.2
Msa1389320 AT3G16650.1 29.255 188 126 5 149 334 166 348 4.87e-15 77.4
Msa1389320 AT5G25150.1 25.088 283 175 7 161 433 360 615 2.07e-16 82.0
Msa1389320 AT5G25150.1 26.818 220 154 5 149 365 414 629 1.17e-15 79.7
Msa1389320 AT5G25150.1 23.372 261 161 8 111 345 419 666 1.72e-11 66.6
Msa1389320 AT5G25150.2 25.088 283 175 7 161 433 360 615 2.17e-16 82.0
Msa1389320 AT5G25150.2 26.818 220 154 5 149 365 414 629 1.39e-15 79.7
Msa1389320 AT2G21390.1 24.399 291 198 9 147 432 3 276 2.83e-16 82.0
Msa1389320 AT5G08390.1 25.439 228 162 5 125 349 31 253 3.74e-16 81.6
Msa1389320 AT5G08390.1 25.234 214 145 6 229 434 9 215 3.91e-15 78.2
Msa1389320 AT5G08390.1 32.597 181 112 5 123 299 71 245 5.39e-15 77.8
Msa1389320 AT5G56130.1 25.385 260 182 7 146 397 13 268 1.28e-15 77.8
Msa1389320 AT1G62020.1 24.055 291 199 9 147 432 3 276 1.40e-15 80.1
Msa1389320 AT5G23430.3 34.254 181 109 6 123 299 71 245 1.76e-15 79.3
Msa1389320 AT5G23430.3 25.234 214 145 6 229 434 9 215 3.27e-15 78.6
Msa1389320 AT5G23430.3 24.561 228 164 5 125 349 31 253 8.45e-15 77.4
Msa1389320 AT5G23430.2 34.254 181 109 6 123 299 71 245 1.76e-15 79.3
Msa1389320 AT5G23430.2 25.234 214 145 6 229 434 9 215 3.27e-15 78.6
Msa1389320 AT5G23430.2 24.561 228 164 5 125 349 31 253 8.45e-15 77.4
Msa1389320 AT5G23430.1 34.254 181 109 6 123 299 71 245 1.90e-15 79.3
Msa1389320 AT5G23430.1 25.234 214 145 6 229 434 9 215 3.71e-15 78.6
Msa1389320 AT5G23430.1 24.561 228 164 5 125 349 31 253 9.08e-15 77.0
Msa1389320 AT1G11160.4 23.729 236 172 5 125 357 30 260 2.10e-15 79.3
Msa1389320 AT1G11160.4 29.545 176 114 4 121 287 68 242 8.98e-13 70.9
Msa1389320 AT1G11160.4 23.786 206 114 3 229 433 8 171 5.48e-12 68.6
Msa1389320 AT1G11160.1 23.729 236 172 5 125 357 30 260 2.29e-15 79.3
Msa1389320 AT1G11160.1 29.545 176 114 4 121 287 68 242 8.73e-13 71.2
Msa1389320 AT1G11160.1 23.786 206 114 3 229 433 8 171 5.19e-12 68.6
Msa1389320 AT1G11160.2 23.729 236 172 5 125 357 30 260 2.45e-15 79.0
Msa1389320 AT1G11160.2 29.545 176 114 4 121 287 68 242 9.20e-13 70.9
Msa1389320 AT1G11160.2 23.786 206 114 3 229 433 8 171 5.57e-12 68.6
Msa1389320 AT1G18080.1 22.408 299 182 6 112 401 16 273 3.05e-15 77.0
Msa1389320 AT1G48630.1 23.333 300 177 8 112 401 16 272 3.16e-15 77.0
Msa1389320 AT3G18140.1 24.150 294 190 7 161 433 1 282 5.47e-15 75.9
Msa1389320 AT3G18130.1 24.809 262 177 10 112 361 16 269 9.70e-15 75.5
Msa1389320 AT1G11160.3 23.611 216 156 6 145 357 9 218 3.04e-14 75.5
Msa1389320 AT1G11160.3 29.545 176 114 4 121 287 26 200 8.52e-13 71.2
Msa1389320 AT5G08560.1 25.658 304 197 10 146 431 267 559 4.44e-14 74.7
Msa1389320 AT5G08560.2 25.658 304 197 10 146 431 267 559 4.44e-14 74.7
Msa1389320 AT5G08560.3 25.658 304 197 10 146 431 267 559 4.44e-14 74.7
Msa1389320 AT1G61210.3 22.907 227 169 4 125 349 30 252 7.41e-14 74.3
Msa1389320 AT1G61210.3 31.609 174 109 4 123 287 70 242 8.16e-14 74.3
Msa1389320 AT1G61210.3 24.762 210 151 5 229 434 8 214 8.93e-12 67.8
Msa1389320 AT2G46290.1 26.587 252 144 9 190 434 33 250 8.99e-14 72.8
Msa1389320 AT1G61210.2 31.609 174 109 4 123 287 70 242 1.15e-13 73.9
Msa1389320 AT1G61210.2 22.907 227 169 4 125 349 30 252 1.84e-13 73.2
Msa1389320 AT1G61210.2 24.762 210 151 5 229 434 8 214 2.22e-11 66.6
Msa1389320 AT1G61210.1 31.609 174 109 4 123 287 70 242 1.29e-13 73.6
Msa1389320 AT1G61210.1 22.907 227 169 4 125 349 30 252 2.08e-13 73.2
Msa1389320 AT1G61210.1 24.762 210 151 5 229 434 8 214 2.34e-11 66.6
Msa1389320 AT1G79990.2 21.429 294 188 8 141 431 3 256 2.05e-13 73.2
Msa1389320 AT5G13480.3 25.100 251 175 8 182 425 99 343 2.06e-13 72.8
Msa1389320 AT5G13480.3 22.967 209 155 4 231 436 106 311 3.13e-11 65.9
Msa1389320 AT1G79990.1 21.429 294 188 8 141 431 3 256 2.32e-13 72.8
Msa1389320 AT5G13480.1 25.100 251 175 8 182 425 111 355 2.44e-13 72.4
Msa1389320 AT5G13480.1 22.967 209 155 4 231 436 118 323 3.38e-11 65.9
Msa1389320 AT5G13480.4 25.100 251 175 8 182 425 99 343 2.49e-13 72.4
Msa1389320 AT5G13480.4 22.967 209 155 4 231 436 106 311 3.62e-11 65.9
Msa1389320 AT5G13480.2 25.100 251 175 8 182 425 122 366 2.57e-13 72.4
Msa1389320 AT5G13480.2 22.967 209 155 4 231 436 129 334 4.40e-11 65.5
Msa1389320 AT1G52360.4 20.748 294 190 8 141 431 3 256 8.65e-13 70.9
Msa1389320 AT1G52360.1 20.748 294 190 8 141 431 3 256 8.65e-13 70.9
Msa1389320 AT3G15980.7 22.785 237 171 7 203 431 24 256 9.16e-13 70.9
Msa1389320 AT3G15980.3 22.785 237 171 7 203 431 24 256 9.42e-13 70.9
Msa1389320 AT3G15980.6 22.785 237 171 7 203 431 24 256 9.42e-13 70.9
Msa1389320 AT3G15980.2 22.785 237 171 7 203 431 24 256 9.42e-13 70.9
Msa1389320 AT3G15980.4 22.785 237 171 7 203 431 24 256 9.42e-13 70.9
Msa1389320 AT1G52360.3 20.748 294 190 8 141 431 3 256 1.02e-12 70.9
Msa1389320 AT1G52360.2 20.748 294 190 8 141 431 47 300 1.10e-12 70.9
Msa1389320 AT3G15980.5 22.785 237 171 7 203 431 24 256 1.11e-12 70.9
Msa1389320 AT3G15980.1 22.785 237 171 7 203 431 24 256 1.15e-12 70.5
Msa1389320 AT5G64730.1 28.641 206 135 6 232 432 14 212 1.84e-12 68.2
Msa1389320 AT5G64730.1 23.649 296 205 9 146 430 11 296 3.41e-12 67.4
Msa1389320 AT5G64730.1 21.739 230 177 3 121 349 70 297 7.13e-11 63.5
Msa1389320 AT1G73720.1 29.843 191 118 7 102 278 201 389 2.75e-12 68.9
Msa1389320 AT1G73720.1 31.452 124 74 3 323 435 213 336 1.05e-11 67.0
Msa1389320 AT3G42660.1 25.974 231 162 4 149 371 58 287 4.18e-12 68.9
Msa1389320 AT2G46280.2 23.413 252 152 7 190 434 6 223 6.16e-12 67.0
Msa1389320 AT2G46280.1 23.413 252 152 7 190 434 6 223 6.16e-12 67.0
Msa1389320 AT1G10580.1 23.693 287 198 13 120 390 292 573 7.68e-12 67.8
Msa1389320 AT2G47410.6 27.317 205 121 7 234 431 52 235 9.30e-12 67.8
Msa1389320 AT2G47410.3 27.317 205 121 7 234 431 52 235 9.30e-12 67.8
Msa1389320 AT5G43920.1 24.281 313 200 12 143 431 214 513 1.16e-11 67.0
Msa1389320 AT2G46280.3 23.413 252 152 7 190 434 6 223 1.23e-11 65.1
Msa1389320 AT4G32551.1 24.351 308 209 9 135 432 638 931 1.24e-11 67.4
Msa1389320 AT4G32551.2 24.351 308 209 9 135 432 676 969 1.84e-11 67.0
Msa1389320 AT1G15440.2 27.189 217 144 8 111 319 347 557 2.90e-11 66.2
Msa1389320 AT1G15440.2 25.641 234 157 10 202 425 314 540 5.12e-11 65.5
Msa1389320 AT2G47410.5 24.686 239 152 7 200 431 200 417 3.54e-11 66.2
Msa1389320 AT1G15440.1 27.189 217 144 8 111 319 387 597 3.54e-11 65.9
Msa1389320 AT1G15440.1 25.641 234 157 10 202 425 354 580 5.26e-11 65.5
Msa1389320 AT5G16750.1 23.636 330 223 12 117 421 317 642 3.76e-11 65.9
Msa1389320 AT2G05720.1 27.979 193 110 7 149 336 102 270 4.78e-11 63.5
Msa1389320 AT1G49040.1 25.874 286 184 11 159 431 861 1131 4.84e-11 65.5
Msa1389320 AT2G47410.1 26.601 203 115 7 234 431 234 407 6.03e-11 65.5
Msa1389320 AT2G47410.2 26.601 203 115 7 234 431 233 406 6.08e-11 65.5
Msa1389320 AT2G47410.4 26.601 203 115 7 234 431 52 225 6.41e-11 65.1
Msa1389320 AT2G22040.1 21.107 289 201 8 166 435 11 291 7.72e-11 63.5
Msa1389320 AT2G26060.1 31.841 201 106 10 109 280 68 266 8.71e-11 63.5
Msa1389320 AT2G26060.2 31.841 201 106 10 109 280 68 266 8.78e-11 63.5

Find 151 sgRNAs with CRISPR-Local

Find 553 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGCCACGATGGAACGTTTC+TGG 0.171901 tig0021252:+36297 Msa1389320:CDS
ATTCAAAATTAATATTAAAA+AGG 0.227965 tig0021252:-41986 None:intergenic
GGTGGTGATGGTGGTGGTGG+TGG 0.266171 tig0021252:+35542 Msa1389320:CDS
GACTTCCTTATGTCGTTTAA+TGG 0.278873 tig0021252:+36568 Msa1389320:CDS
TTTCTCTGGAGGATCCTTAA+TGG 0.279006 tig0021252:+35939 Msa1389320:CDS
ATGATGGAGCTGTGAGATTA+TGG 0.280439 tig0021252:+41577 Msa1389320:CDS
ACTTCAACTATTGCTCTTAC+TGG 0.290120 tig0021252:+39621 Msa1389320:CDS
ACAGATTCTGTATCGAGTTT+AGG 0.294590 tig0021252:+36271 Msa1389320:CDS
ACGATGCAACCTTGAGAATA+TGG 0.299157 tig0021252:+36746 Msa1389320:CDS
TTGATGGAACTGTTAAAATC+TGG 0.307851 tig0021252:+36332 Msa1389320:CDS
TTGTTTGATTGCATATGATA+TGG 0.321150 tig0021252:+41757 Msa1389320:three_prime_UTR
TCATCATCACTATGATGATT+TGG 0.328094 tig0021252:-35240 None:intergenic
AACTGTATGACAGTGGTTCC+TGG 0.340668 tig0021252:+41057 Msa1389320:intron
GAATGGGCTTCCCAGCTTAA+TGG 0.341217 tig0021252:+35963 Msa1389320:CDS
GGGAAGCCCATTCTCCATTA+AGG 0.345840 tig0021252:-35953 None:intergenic
GGAGAGCCGCCAGGAGGATC+AGG 0.348540 tig0021252:-35391 None:intergenic
CAAGCATGTATATGTCCTTT+AGG 0.349274 tig0021252:+41820 Msa1389320:three_prime_UTR
GATGGTGATGGTGGTGGTGA+TGG 0.350066 tig0021252:+35530 Msa1389320:CDS
AGAGGAAATGTCCTCATTGC+TGG 0.358059 tig0021252:+36502 Msa1389320:CDS
GGTGGTGGTGATGGTGGTGG+TGG 0.368236 tig0021252:+35539 Msa1389320:CDS
AATCTGAAAGGCACGTTAGA+TGG 0.390124 tig0021252:+36367 Msa1389320:CDS
GTTAAAATCTGGGATGCGTC+TGG 0.391279 tig0021252:+36343 Msa1389320:CDS
GCATGGATAAAATGACCATC+TGG 0.392161 tig0021252:+41093 Msa1389320:CDS
TGCCTCATCTGTTGGGCTGC+AGG 0.397890 tig0021252:-35883 None:intergenic
CCTCATGCTCACAAATGCTT+CGG 0.405559 tig0021252:-41136 None:intergenic
GGAGGATCAGGGCCACCATC+TGG 0.408902 tig0021252:-35379 None:intergenic
GATGGTGGTGGTGATGGTGG+TGG 0.409890 tig0021252:+35536 Msa1389320:CDS
GCCACAAGTGCCTCATCTGT+TGG 0.411659 tig0021252:-35891 None:intergenic
AACAATATATACCATTAAGC+TGG 0.414279 tig0021252:-35974 None:intergenic
CTCATGCTCACAAATGCTTC+GGG 0.414517 tig0021252:-41135 None:intergenic
AGTGGTTCCTGGGCTGCAAT+TGG 0.415085 tig0021252:+41068 Msa1389320:intron
GCTCTTACTGGTTCTGTGGA+TGG 0.419290 tig0021252:+39633 Msa1389320:CDS
GATGAGGCACTTGTGGCAAC+AGG 0.424253 tig0021252:+35897 Msa1389320:CDS
GGTGATGGTGGTGGTGATGG+TGG 0.426374 tig0021252:+35533 Msa1389320:CDS
CCACAAGTGCCTCATCTGTT+GGG 0.429128 tig0021252:-35890 None:intergenic
TGTTTGATTGCATATGATAT+GGG 0.430437 tig0021252:+41758 Msa1389320:three_prime_UTR
CGACGGCGGCGGCTGCTGTA+TGG 0.432845 tig0021252:-34861 None:intergenic
CCTGGCGGCTCTCCCGATCC+AGG 0.435267 tig0021252:+35400 Msa1389320:CDS
CTCACAAATGCTTCGGGCTA+AGG 0.436027 tig0021252:-41129 None:intergenic
GGTTCCTGGGCTGCAATTGG+AGG 0.441360 tig0021252:+41071 Msa1389320:CDS
GAATGTGTCAGAACATTTAG+AGG 0.443558 tig0021252:+41615 Msa1389320:CDS
GATGGTGATGGTGATGGTGG+TGG 0.443920 tig0021252:+35524 Msa1389320:CDS
GGAGGATCCTTAATGGAGAA+TGG 0.450325 tig0021252:+35946 Msa1389320:CDS
GATGGTGATGGTGATGGTGA+TGG 0.452355 tig0021252:+35518 Msa1389320:CDS
GGATTGTCGTCAGGTGCATC+AGG 0.456455 tig0021252:-35358 None:intergenic
TGTTCAATCCACTGAATGAA+TGG 0.457960 tig0021252:-34835 None:intergenic
GGCACATCGTATGTGGCTAC+TGG 0.459735 tig0021252:+41549 Msa1389320:CDS
CTATGTAGGCCACCTGGATC+GGG 0.461969 tig0021252:-35412 None:intergenic
TGCTAAACATGTTAATCCCT+CGG 0.466251 tig0021252:-39589 None:intergenic
CCGCCGTCGTCTCCATTCTC+AGG 0.468798 tig0021252:+34875 Msa1389320:five_prime_UTR
TTGTATTGCTTAAAGTATCA+AGG 0.475310 tig0021252:-35209 None:intergenic
GATGGTGGCCCTGATCCTCC+TGG 0.475492 tig0021252:+35382 Msa1389320:CDS
TCAAGTTCCATTGAGTGTGT+TGG 0.479203 tig0021252:+40475 Msa1389320:CDS
TGATGGAGCTGTGAGATTAT+GGG 0.479339 tig0021252:+41578 Msa1389320:CDS
CCACCATCTGGATTGTCGTC+AGG 0.479833 tig0021252:-35367 None:intergenic
TGCGAATCCAACACACTCAA+TGG 0.480617 tig0021252:-40482 None:intergenic
GGTGATGGTGATGGTGATGG+TGG 0.481615 tig0021252:+35521 Msa1389320:CDS
GAGGATCCTTAATGGAGAAT+GGG 0.481827 tig0021252:+35947 Msa1389320:CDS
CATCGTCAGAGGGAACTTCA+TGG 0.482786 tig0021252:-35327 None:intergenic
TGATGGAACTGTTAAAATCT+GGG 0.483493 tig0021252:+36333 Msa1389320:CDS
CGTGACCATTAAACGACATA+AGG 0.485564 tig0021252:-36573 None:intergenic
CACATACGATGTGCCAAGCC+AGG 0.485853 tig0021252:-41541 None:intergenic
AAAGAGAACGCACCTGAGAA+TGG 0.489829 tig0021252:-34887 None:intergenic
GGTGGTGGTGGTAATGGTGG+TGG 0.491312 tig0021252:+35563 Msa1389320:CDS
CATGCCTCCAATTGCAGCCC+AGG 0.491862 tig0021252:-41075 None:intergenic
CCTGGATCGGGAGAGCCGCC+AGG 0.491870 tig0021252:-35400 None:intergenic
GATGGAACGTTTCTGGCATC+AGG 0.495719 tig0021252:+36304 Msa1389320:CDS
AGGAAGAAGTTCATCGTCAG+AGG 0.495964 tig0021252:-35338 None:intergenic
GATTCTGTGCATACATTCAC+TGG 0.498391 tig0021252:+35596 Msa1389320:CDS
ACTATGTAGGCCACCTGGAT+CGG 0.499980 tig0021252:-35413 None:intergenic
CTGAAAATCCATTCATTCAG+TGG 0.503142 tig0021252:+34827 Msa1389320:five_prime_UTR
CATAACATAAAACAACAATC+TGG 0.505603 tig0021252:-41867 None:intergenic
TATTGCTCTTACTGGTTCTG+TGG 0.506596 tig0021252:+39629 Msa1389320:CDS
GTGGTAACAGTTATTGTGTT+GGG 0.509203 tig0021252:+35742 Msa1389320:CDS
GTGATGACGTAGGATTTCTC+TGG 0.509352 tig0021252:+35925 Msa1389320:CDS
AGGAACGCCCGCTGTCCTAA+AGG 0.509497 tig0021252:-41835 None:intergenic
CCCAACAGATGAGGCACTTG+TGG 0.512260 tig0021252:+35890 Msa1389320:CDS
AATCCTCCTCAGTGTGGATG+TGG 0.512568 tig0021252:+36533 Msa1389320:CDS
GTTAATCCCTCGGTATGGTA+TGG 0.513418 tig0021252:-39579 None:intergenic
GATGGTGATGGTGATGGTGA+TGG 0.515485 tig0021252:+35512 Msa1389320:CDS
GTTAAATCTTACAGTGGCTC+AGG 0.519678 tig0021252:+36470 Msa1389320:intron
GCAATGAGGACATTTCCTCT+TGG 0.527044 tig0021252:-36499 None:intergenic
CATATTGTGAATATCACTAC+AGG 0.527149 tig0021252:+39663 Msa1389320:CDS
CTGGCTTGGCACATCGTATG+TGG 0.530171 tig0021252:+41542 Msa1389320:CDS
CTGGGCTGCAATTGGAGGCA+TGG 0.532320 tig0021252:+41076 Msa1389320:CDS
AGATTATGGGACAGTCGATC+TGG 0.536579 tig0021252:+41591 Msa1389320:CDS
TTAAATATCGCAGATGGTGA+TGG 0.545678 tig0021252:+35494 Msa1389320:intron
GCACTTGTGGCAACAGGAGC+TGG 0.547872 tig0021252:+35903 Msa1389320:CDS
GAGAATGGAGACGACGGCGG+CGG 0.547883 tig0021252:-34872 None:intergenic
ACAATATATACCATTAAGCT+GGG 0.549455 tig0021252:-35973 None:intergenic
TGGAACTTGAATGAGAAGGC+AGG 0.549465 tig0021252:-40462 None:intergenic
GGCACGTTAGATGGTCCTGA+AGG 0.554207 tig0021252:+36376 Msa1389320:CDS
GTTTGATTGCATATGATATG+GGG 0.555606 tig0021252:+41759 Msa1389320:three_prime_UTR
TATATGTCCTTTAGGACAGC+GGG 0.559132 tig0021252:+41828 Msa1389320:three_prime_UTR
TTAGGGAGAACAATATGTAC+TGG 0.559850 tig0021252:+36718 Msa1389320:intron
ACTGTATGACAGTGGTTCCT+GGG 0.563238 tig0021252:+41058 Msa1389320:intron
GTGGCTACTGGATCTAATGA+TGG 0.564521 tig0021252:+41561 Msa1389320:CDS
CCGAAGCATTTGTGAGCATG+AGG 0.565837 tig0021252:+41136 Msa1389320:CDS
ATTTCTGCTCTAGAATGTCT+AGG 0.565900 tig0021252:-41938 None:intergenic
CAACAATCTGGCTTCTGTAG+AGG 0.567925 tig0021252:-41855 None:intergenic
TGTGGTAACAGTTATTGTGT+TGG 0.568611 tig0021252:+35741 Msa1389320:CDS
GAGAGCCGCCAGGAGGATCA+GGG 0.578266 tig0021252:-35390 None:intergenic
GCACGTTAGATGGTCCTGAA+GGG 0.585298 tig0021252:+36377 Msa1389320:CDS
TAATCACGAGTACCTTGTCT+CGG 0.589265 tig0021252:+41674 Msa1389320:CDS
CACGTTAGATGGTCCTGAAG+GGG 0.591663 tig0021252:+36378 Msa1389320:CDS
AACATGTTAATCCCTCGGTA+TGG 0.591723 tig0021252:-39584 None:intergenic
CACAATAACTGTTACCACAT+GGG 0.591966 tig0021252:-35737 None:intergenic
CATACATTCACTGGTCATGA+TGG 0.599726 tig0021252:+35605 Msa1389320:CDS
GATGGTGATGGTGATGGTGA+TGG 0.603742 tig0021252:+35506 Msa1389320:intron
CATGGATAAAATGACCATCT+GGG 0.612989 tig0021252:+41094 Msa1389320:CDS
AAATCTTACAGTGGCTCAGG+TGG 0.615875 tig0021252:+36473 Msa1389320:intron
GGAACTTGAATGAGAAGGCA+GGG 0.618213 tig0021252:-40461 None:intergenic
TGCCTGCAGCCCAACAGATG+AGG 0.618221 tig0021252:+35881 Msa1389320:CDS
ACACAATAACTGTTACCACA+TGG 0.621557 tig0021252:-35738 None:intergenic
ATCGGGAGTAAAATCACCAC+AGG 0.624969 tig0021252:-36608 None:intergenic
ACAATAACTGTTACCACATG+GGG 0.626090 tig0021252:-35736 None:intergenic
GTGACATGTTCAACCTGGCT+TGG 0.626776 tig0021252:+41528 Msa1389320:CDS
GGTCATCCATACCATACCGA+GGG 0.627020 tig0021252:+39573 Msa1389320:intron
GATCTAAAGAAGCCGAGACA+AGG 0.627111 tig0021252:-41686 None:intergenic
AGTTTAGGATTTAGCCACGA+TGG 0.627308 tig0021252:+36286 Msa1389320:CDS
GATGCGTCTGGAAATCTGAA+AGG 0.634031 tig0021252:+36355 Msa1389320:CDS
ATCGCAGATGGTGATGGTGA+TGG 0.637108 tig0021252:+35500 Msa1389320:intron
AGTGTGTTGGATTCGCACCA+AGG 0.639273 tig0021252:+40488 Msa1389320:CDS
GGAAGAAGTTCATCGTCAGA+GGG 0.639941 tig0021252:-35337 None:intergenic
ATGTCGTTTAATGGTCACGC+TGG 0.641738 tig0021252:+36577 Msa1389320:CDS
ATGGAGTGACATGTTCAACC+TGG 0.644264 tig0021252:+41523 Msa1389320:CDS
GGAGTGCTCTACATCCCAGA+TGG 0.644840 tig0021252:-41108 None:intergenic
ATGACGTAGGATTTCTCTGG+AGG 0.647613 tig0021252:+35928 Msa1389320:CDS
ACGTTAGATGGTCCTGAAGG+GGG 0.655427 tig0021252:+36379 Msa1389320:CDS
CCTGACGACAATCCAGATGG+TGG 0.660117 tig0021252:+35367 Msa1389320:CDS
GCACCTGAGAATGGAGACGA+CGG 0.662780 tig0021252:-34878 None:intergenic
TTGATGAATCCTCCTCAGTG+TGG 0.662951 tig0021252:+36527 Msa1389320:CDS
ATTCATCAAAACCAGCAATG+AGG 0.666974 tig0021252:-36513 None:intergenic
AATGTGTCAGAACATTTAGA+GGG 0.671297 tig0021252:+41616 Msa1389320:CDS
GAAAGCATTCATGTTGTGCG+AGG 0.671673 tig0021252:+36784 Msa1389320:CDS
CATGTTCAAATCTCCCCATG+TGG 0.672344 tig0021252:+35723 Msa1389320:CDS
ATTCCACATCCACACTGAGG+AGG 0.672492 tig0021252:-36536 None:intergenic
CCTGAGAATGGAGACGACGG+CGG 0.675601 tig0021252:-34875 None:intergenic
ACAGGAGCTGGTGATGACGT+AGG 0.681696 tig0021252:+35915 Msa1389320:CDS
GGATCGGGAGAGCCGCCAGG+AGG 0.683258 tig0021252:-35397 None:intergenic
AGGTCATCCATACCATACCG+AGG 0.684577 tig0021252:+39572 Msa1389320:intron
TCAATGGAACTTGAATGAGA+AGG 0.685059 tig0021252:-40466 None:intergenic
GTATATGTCCTTTAGGACAG+CGG 0.693297 tig0021252:+41827 Msa1389320:three_prime_UTR
GCACCTGACGACAATCCAGA+TGG 0.695484 tig0021252:+35364 Msa1389320:CDS
TGGCTCAGGTGGCATCCAAG+AGG 0.696728 tig0021252:+36484 Msa1389320:CDS
CACGCTGGTAGTGTGACCTG+TGG 0.697317 tig0021252:+36592 Msa1389320:CDS
GGTTGGCGTCTAAAATAACA+CGG 0.705161 tig0021252:-34805 None:intergenic
ATGCCAGAAACGTTCCATCG+TGG 0.721913 tig0021252:-36300 None:intergenic
GCTATTCCACATCCACACTG+AGG 0.751183 tig0021252:-36539 None:intergenic
GGTGGCCCTGATCCTCCTGG+CGG 0.759172 tig0021252:+35385 Msa1389320:CDS
TGGCGTCTAAAATAACACGG+AGG 0.847487 tig0021252:-34802 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTTAATATTGTAATTTT+GGG - tig0021252:36877-36896 None:intergenic 10.0%
!!! TAAACTTAATATTGTAATTT+TGG - tig0021252:36878-36897 None:intergenic 10.0%
!!! ATATATTGTTTTCTTATGAA+AGG + tig0021252:35987-36006 Msa1389320:intron 15.0%
!!! AAAGTTATGTAACAATTTTT+GGG + tig0021252:38845-38864 Msa1389320:intron 15.0%
!! ATAATTTCAAAAATAACTGT+AGG + tig0021252:39440-39459 Msa1389320:intron 15.0%
!! ATTCTTTGTATTTAATGTAT+CGG - tig0021252:39501-39520 None:intergenic 15.0%
!!! TATCCTATTGTATTTTAATT+TGG + tig0021252:41449-41468 Msa1389320:intron 15.0%
!! ATTCCAAATTAAAATACAAT+AGG - tig0021252:41455-41474 None:intergenic 15.0%
!! AAACGAGAAAATTGATTAAA+AGG - tig0021252:34931-34950 None:intergenic 20.0%
!!! CTTTGTTTGTCTTATTTTAT+AGG + tig0021252:35165-35184 Msa1389320:intron 20.0%
!!! ATTATTTTAAATATCGCAGA+TGG + tig0021252:35488-35507 Msa1389320:intron 20.0%
!!! GATATTTTTTAATGCTTTCT+TGG + tig0021252:35830-35849 Msa1389320:intron 20.0%
!! TATCTAGTATAATATAAGTG+TGG + tig0021252:36165-36184 Msa1389320:intron 20.0%
!! GACATAATATAATATTCTGA+TGG - tig0021252:37427-37446 None:intergenic 20.0%
!! TCATCATACTAAGAATTTAA+AGG + tig0021252:37503-37522 Msa1389320:intron 20.0%
!! CATCATACTAAGAATTTAAA+GGG + tig0021252:37504-37523 Msa1389320:intron 20.0%
!! ATCATACTAAGAATTTAAAG+GGG + tig0021252:37505-37524 Msa1389320:intron 20.0%
!! AAGAATTATACGGTTTATTA+AGG - tig0021252:37573-37592 None:intergenic 20.0%
!!! AGGTTTTCAAAAGAATTATA+CGG - tig0021252:37583-37602 None:intergenic 20.0%
!!! AATCAACCACTTTTTTTTTA+AGG - tig0021252:38394-38413 None:intergenic 20.0%
!!! TTATGTTAAACCTTTTGAAT+TGG + tig0021252:38474-38493 Msa1389320:intron 20.0%
!! AATTGGTATTCAATGATTTA+TGG + tig0021252:38491-38510 Msa1389320:intron 20.0%
!! AATAGATATGTCTTAAGAAA+CGG + tig0021252:38780-38799 Msa1389320:intron 20.0%
!! AAAAAAATTGATAAGCAAGA+AGG - tig0021252:38813-38832 None:intergenic 20.0%
!!! CAAAGTTATGTAACAATTTT+TGG + tig0021252:38844-38863 Msa1389320:intron 20.0%
!! CATATCGTATCATAAAAATA+AGG - tig0021252:39051-39070 None:intergenic 20.0%
!! ATCATATCATGTAAATAACA+GGG - tig0021252:39475-39494 None:intergenic 20.0%
!! TATCATATCATGTAAATAAC+AGG - tig0021252:39476-39495 None:intergenic 20.0%
!!! TTAGTTATGTTTCTAAGATT+TGG + tig0021252:39810-39829 Msa1389320:intron 20.0%
!! AATATGTTAGAAACTAATGT+GGG - tig0021252:39915-39934 None:intergenic 20.0%
!! AAATATGTTAGAAACTAATG+TGG - tig0021252:39916-39935 None:intergenic 20.0%
!!! ATCCCAATTTTAATCATATT+GGG - tig0021252:40013-40032 None:intergenic 20.0%
!!! TATCCCAATTTTAATCATAT+TGG - tig0021252:40014-40033 None:intergenic 20.0%
!! AAACTCGATTACATTATATA+TGG + tig0021252:40043-40062 Msa1389320:intron 20.0%
!!! AAATTGATTAGTCAAAAGTT+TGG + tig0021252:40120-40139 Msa1389320:intron 20.0%
!!! TGCAACTTTATTTATGTAAA+AGG + tig0021252:40366-40385 Msa1389320:intron 20.0%
!!! GCAACTTTATTTATGTAAAA+GGG + tig0021252:40367-40386 Msa1389320:intron 20.0%
!!! ACTATTCATATTTAAGGTTT+AGG - tig0021252:40876-40895 None:intergenic 20.0%
!! AAACCTTAAATATGAATAGT+TGG + tig0021252:40876-40895 Msa1389320:intron 20.0%
!!! CTCAAAAGTTTTTTGTTTTA+TGG + tig0021252:42023-42042 Msa1389320:three_prime_UTR 20.0%
! ACTGTTTATTTCCTTCTATA+AGG + tig0021252:35087-35106 Msa1389320:intron 25.0%
! CTGTTTATTTCCTTCTATAA+GGG + tig0021252:35088-35107 Msa1389320:intron 25.0%
! TGTTTATTTCCTTCTATAAG+GGG + tig0021252:35089-35108 Msa1389320:intron 25.0%
!! TTGTATTGCTTAAAGTATCA+AGG - tig0021252:35212-35231 None:intergenic 25.0%
! AATCATCAATGTTACTATGT+AGG - tig0021252:35429-35448 None:intergenic 25.0%
! AAACAAACAAATAGAGTAGA+AGG - tig0021252:35635-35654 None:intergenic 25.0%
! ACAATATATACCATTAAGCT+GGG - tig0021252:35976-35995 None:intergenic 25.0%
! AACAATATATACCATTAAGC+TGG - tig0021252:35977-35996 None:intergenic 25.0%
! TTATGAAAGGCAAATATTAG+TGG + tig0021252:36000-36019 Msa1389320:intron 25.0%
!!! ATATTAGTGGTTAGTTTGTT+AGG + tig0021252:36013-36032 Msa1389320:intron 25.0%
!!! TATTAGTGGTTAGTTTGTTA+GGG + tig0021252:36014-36033 Msa1389320:intron 25.0%
!! ACAAAAAAGTGCAAGAAATT+AGG + tig0021252:37071-37090 Msa1389320:intron 25.0%
! ATGTTATAACCGATAAAGAA+AGG + tig0021252:37182-37201 Msa1389320:intron 25.0%
! GATAAATCTCTGATTAGATA+AGG + tig0021252:37371-37390 Msa1389320:intron 25.0%
!!! CATTTTGTTTGTGTTTTCTT+GGG - tig0021252:37449-37468 None:intergenic 25.0%
!!! ACATTTTGTTTGTGTTTTCT+TGG - tig0021252:37450-37469 None:intergenic 25.0%
! AAGAAAACACAAACAAAATG+TGG + tig0021252:37449-37468 Msa1389320:intron 25.0%
! TTCTTAGTATGATGAGAATT+GGG - tig0021252:37498-37517 None:intergenic 25.0%
! ATTCTTAGTATGATGAGAAT+TGG - tig0021252:37499-37518 None:intergenic 25.0%
! TCATACTAAGAATTTAAAGG+GGG + tig0021252:37506-37525 Msa1389320:intron 25.0%
! TTTATGTAGATCTATTGTTG+GGG - tig0021252:37696-37715 None:intergenic 25.0%
! CTTTATGTAGATCTATTGTT+GGG - tig0021252:37697-37716 None:intergenic 25.0%
! ACTTTATGTAGATCTATTGT+TGG - tig0021252:37698-37717 None:intergenic 25.0%
! ATCTCAAGCTAAATACATTT+GGG - tig0021252:37785-37804 None:intergenic 25.0%
! TATCTCAAGCTAAATACATT+TGG - tig0021252:37786-37805 None:intergenic 25.0%
!!! TGTATTTAGCTTGAGATAAA+AGG + tig0021252:37788-37807 Msa1389320:intron 25.0%
! TGAAGTAAAACACTTAATGA+TGG - tig0021252:37820-37839 None:intergenic 25.0%
! AGGAAAAGTCTATGAATAAT+CGG + tig0021252:38199-38218 Msa1389320:intron 25.0%
!!! CCACTTTTTTTTTAAGGTAT+TGG - tig0021252:38388-38407 None:intergenic 25.0%
! CCAATACCTTAAAAAAAAAG+TGG + tig0021252:38385-38404 Msa1389320:intron 25.0%
! AACATAAACCTTAGTAGAAA+GGG - tig0021252:38461-38480 None:intergenic 25.0%
! TAACATAAACCTTAGTAGAA+AGG - tig0021252:38462-38481 None:intergenic 25.0%
! TCATTGAATACCAATTCAAA+AGG - tig0021252:38487-38506 None:intergenic 25.0%
!! TAACTTGTATCACACAAAAA+AGG + tig0021252:38757-38776 Msa1389320:intron 25.0%
! GTTCTTTGTATTTATCGTAA+AGG - tig0021252:39074-39093 None:intergenic 25.0%
!!! TTTTTGAAATTATTGCCTTG+AGG - tig0021252:39433-39452 None:intergenic 25.0%
!!! TCGTTAACCTTTACTTTTAT+AGG + tig0021252:39552-39571 Msa1389320:intron 25.0%
!!! ATTTTTTGTGCATTAGTCTT+TGG + tig0021252:39746-39765 Msa1389320:intron 25.0%
!!! TTTTTTGTGCATTAGTCTTT+GGG + tig0021252:39747-39766 Msa1389320:intron 25.0%
! CATAACTAAAGACATATGAA+AGG - tig0021252:39799-39818 None:intergenic 25.0%
! ATATGTTAGAAACTAATGTG+GGG - tig0021252:39914-39933 None:intergenic 25.0%
! TAATCATATTGGGGATAATT+GGG - tig0021252:40003-40022 None:intergenic 25.0%
! TTAATCATATTGGGGATAAT+TGG - tig0021252:40004-40023 None:intergenic 25.0%
! ATCCCCAATATGATTAAAAT+TGG + tig0021252:40007-40026 Msa1389320:intron 25.0%
! TCCCCAATATGATTAAAATT+GGG + tig0021252:40008-40027 Msa1389320:intron 25.0%
!!! TCCCAATTTTAATCATATTG+GGG - tig0021252:40012-40031 None:intergenic 25.0%
! GATTACATTATATATGGAGA+TGG + tig0021252:40049-40068 Msa1389320:intron 25.0%
!! AATGATGTTCTTTTGTAATG+TGG + tig0021252:40242-40261 Msa1389320:intron 25.0%
!!! TATAAATTTAGCTTTCTGCT+TGG + tig0021252:40398-40417 Msa1389320:intron 25.0%
! ATGCCAACTATTCATATTTA+AGG - tig0021252:40882-40901 None:intergenic 25.0%
! TTGGCATAAGTGAAAATTAT+GGG + tig0021252:40895-40914 Msa1389320:intron 25.0%
! GTCTTAATCTAATGATGATT+TGG + tig0021252:40985-41004 Msa1389320:intron 25.0%
!! CATATTTAATTAGGAGTACA+AGG - tig0021252:41012-41031 None:intergenic 25.0%
! TTAAGGAACAAAGTTATTGA+GGG - tig0021252:41037-41056 None:intergenic 25.0%
! TTTAAGGAACAAAGTTATTG+AGG - tig0021252:41038-41057 None:intergenic 25.0%
! TTGTTTGATTGCATATGATA+TGG + tig0021252:41757-41776 Msa1389320:three_prime_UTR 25.0%
! TGTTTGATTGCATATGATAT+GGG + tig0021252:41758-41777 Msa1389320:three_prime_UTR 25.0%
! CATAACATAAAACAACAATC+TGG - tig0021252:41870-41889 None:intergenic 25.0%
!!! TGTTGTTTTATGTTATGTTG+TGG + tig0021252:41873-41892 Msa1389320:three_prime_UTR 25.0%
!! AGAAATGTGATTGTCTTTTA+AGG + tig0021252:41955-41974 Msa1389320:three_prime_UTR 25.0%
TCTGTGAATTAAGTGGAATT+TGG - tig0021252:34994-35013 None:intergenic 30.0%
GAAGGAAATAAACAGTAAAC+TGG - tig0021252:35083-35102 None:intergenic 30.0%
TCATCATCACTATGATGATT+TGG - tig0021252:35243-35262 None:intergenic 30.0%
ACACAAATCATATATGTGCA+AGG + tig0021252:35790-35809 Msa1389320:intron 30.0%
AATACATAGCTATTGATGTG+TGG + tig0021252:36134-36153 Msa1389320:intron 30.0%
GTATAATATAAGTGTGGCAT+TGG + tig0021252:36171-36190 Msa1389320:intron 30.0%
TTGATGGAACTGTTAAAATC+TGG + tig0021252:36332-36351 Msa1389320:CDS 30.0%
TGATGGAACTGTTAAAATCT+GGG + tig0021252:36333-36352 Msa1389320:CDS 30.0%
! GAAACTATCAAAAGCACAAA+AGG - tig0021252:36438-36457 None:intergenic 30.0%
TGAAGATAGATTACTACCAT+CGG - tig0021252:36629-36648 None:intergenic 30.0%
GTAGTAATCTATCTTCATCT+TGG + tig0021252:36632-36651 Msa1389320:intron 30.0%
! TTCTTTTCACTTGATACCTT+AGG + tig0021252:36700-36719 Msa1389320:intron 30.0%
! TCTTTTCACTTGATACCTTA+GGG + tig0021252:36701-36720 Msa1389320:intron 30.0%
CAACTAACTCCTTTCTTTAT+CGG - tig0021252:37194-37213 None:intergenic 30.0%
! CTGCCTTATTACAAAAATGT+CGG + tig0021252:37263-37282 Msa1389320:intron 30.0%
! TGATTAGATAAGGCTTTAGT+TGG + tig0021252:37381-37400 Msa1389320:intron 30.0%
TCTGATATGTATCTTTGTGA+TGG + tig0021252:37656-37675 Msa1389320:intron 30.0%
ACTGTAAACTTTCCAAGTAT+GGG - tig0021252:37741-37760 None:intergenic 30.0%
AACTGTAAACTTTCCAAGTA+TGG - tig0021252:37742-37761 None:intergenic 30.0%
! AAGCTAAATACATTTGGGAT+CGG - tig0021252:37780-37799 None:intergenic 30.0%
! AGTGTTTTACTTCAATTCCT+AGG + tig0021252:37826-37845 Msa1389320:intron 30.0%
! AATGCTTTATTACTCGTAAC+CGG + tig0021252:38052-38071 Msa1389320:intron 30.0%
TAGTGCACTTAACAAGTATA+AGG - tig0021252:38265-38284 None:intergenic 30.0%
!! ATAATGGGTGTTTAAGGAAA+AGG - tig0021252:38298-38317 None:intergenic 30.0%
AATACATGGATAATAGATCC+AGG - tig0021252:38574-38593 None:intergenic 30.0%
CATCTACAGAAATGAATACA+TGG - tig0021252:38588-38607 None:intergenic 30.0%
CTTGATATTGATAAGGAAAG+TGG - tig0021252:38887-38906 None:intergenic 30.0%
TTCCTTATCAATATCAAGCA+AGG + tig0021252:38889-38908 Msa1389320:intron 30.0%
AGTGAAATTGAGAAATATCC+TGG + tig0021252:38925-38944 Msa1389320:intron 30.0%
GTTGGAGCATATAAATCATA+TGG + tig0021252:39122-39141 Msa1389320:intron 30.0%
AATTTGACAAAGTTGTGATG+TGG + tig0021252:39214-39233 Msa1389320:intron 30.0%
!! AATTTGTTAAGCACGACTTA+GGG + tig0021252:39296-39315 Msa1389320:intron 30.0%
! AGGCAATATAAAATTGACTC+TGG - tig0021252:39413-39432 None:intergenic 30.0%
! GTCAATTTTATATTGCCTCA+AGG + tig0021252:39415-39434 Msa1389320:intron 30.0%
TGGATGACCTATAAAAGTAA+AGG - tig0021252:39562-39581 None:intergenic 30.0%
CATATTGTGAATATCACTAC+AGG + tig0021252:39663-39682 Msa1389320:CDS 30.0%
!!! TTTTTGTGCATTAGTCTTTG+GGG + tig0021252:39748-39767 Msa1389320:intron 30.0%
TTATAAACATAGGTTCGTTC+AGG - tig0021252:39875-39894 None:intergenic 30.0%
TGAACGAACCTATGTTTATA+AGG + tig0021252:39874-39893 Msa1389320:intron 30.0%
GAACGAACCTATGTTTATAA+GGG + tig0021252:39875-39894 Msa1389320:intron 30.0%
TGTCTTTCCCTTATAAACAT+AGG - tig0021252:39885-39904 None:intergenic 30.0%
! TAACATATTTTCACGAGTCA+GGG + tig0021252:39926-39945 Msa1389320:intron 30.0%
AATCATATTGGGGATAATTG+GGG - tig0021252:40002-40021 None:intergenic 30.0%
!! TAATCAACCCAACTGTTTTT+GGG + tig0021252:40189-40208 Msa1389320:intron 30.0%
GATAAAACCCAAAAACAGTT+GGG - tig0021252:40199-40218 None:intergenic 30.0%
AGATAAAACCCAAAAACAGT+TGG - tig0021252:40200-40219 None:intergenic 30.0%
!!! GTTTTTGGGTTTTATCTCAT+CGG + tig0021252:40203-40222 Msa1389320:intron 30.0%
AAGGATAAGTGATGAAAGTT+TGG - tig0021252:40315-40334 None:intergenic 30.0%
AAATGTTGTATCTTGTTGAC+AGG + tig0021252:40429-40448 Msa1389320:intron 30.0%
ATGACTGTAACTCTATAATG+CGG - tig0021252:40648-40667 None:intergenic 30.0%
CTACTTCTTTCAAACATCAA+CGG - tig0021252:40716-40735 None:intergenic 30.0%
GTTGATGTTTGAAAGAAGTA+GGG + tig0021252:40715-40734 Msa1389320:intron 30.0%
TATTTACGAGTCATAACACT+TGG - tig0021252:40768-40787 None:intergenic 30.0%
GTTGGCATAAGTGAAAATTA+TGG + tig0021252:40894-40913 Msa1389320:intron 30.0%
TTGAGGGCTCATATTTAATT+AGG - tig0021252:41021-41040 None:intergenic 30.0%
! AATCAACACCCATTTTCTTA+TGG + tig0021252:41286-41305 Msa1389320:intron 30.0%
! ATCAACACCCATTTTCTTAT+GGG + tig0021252:41287-41306 Msa1389320:intron 30.0%
GATTTCACCCATAAGAAAAT+GGG - tig0021252:41297-41316 None:intergenic 30.0%
! CATTTTCTTATGGGTGAAAT+CGG + tig0021252:41296-41315 Msa1389320:intron 30.0%
! ATTTTCTTATGGGTGAAATC+GGG + tig0021252:41297-41316 Msa1389320:intron 30.0%
AGTCTCACCATATTGAAAAT+GGG - tig0021252:41347-41366 None:intergenic 30.0%
AATGTGTCAGAACATTTAGA+GGG + tig0021252:41616-41635 Msa1389320:CDS 30.0%
GTTTGATTGCATATGATATG+GGG + tig0021252:41759-41778 Msa1389320:three_prime_UTR 30.0%
!!! CTAATCAAAACCCCTTTTTT+TGG + tig0021252:41793-41812 Msa1389320:three_prime_UTR 30.0%
! CATAAGGTTTCGAATTTTGA+CGG + tig0021252:41914-41933 Msa1389320:three_prime_UTR 30.0%
!!! AGTTTTTTGTTTTATGGCGA+TGG + tig0021252:42029-42048 Msa1389320:three_prime_UTR 30.0%
!!! GTTTTTTGTTTTATGGCGAT+GGG + tig0021252:42030-42049 Msa1389320:three_prime_UTR 30.0%
!!! GAATGAATGGATTTTCAGGT+TGG - tig0021252:34825-34844 None:intergenic 35.0%
!! CACTGAATGAATGGATTTTC+AGG - tig0021252:34829-34848 None:intergenic 35.0%
CTGAAAATCCATTCATTCAG+TGG + tig0021252:34827-34846 Msa1389320:five_prime_UTR 35.0%
TGTTCAATCCACTGAATGAA+TGG - tig0021252:34838-34857 None:intergenic 35.0%
!! AAGAGTGTCTGTGAATTAAG+TGG - tig0021252:35001-35020 None:intergenic 35.0%
ATTATCTTGCCCCTTATAGA+AGG - tig0021252:35101-35120 None:intergenic 35.0%
CTATAAGGGGCAAGATAATT+AGG + tig0021252:35102-35121 Msa1389320:intron 35.0%
TTAAATATCGCAGATGGTGA+TGG + tig0021252:35494-35513 Msa1389320:intron 35.0%
ACAATAACTGTTACCACATG+GGG - tig0021252:35739-35758 None:intergenic 35.0%
CACAATAACTGTTACCACAT+GGG - tig0021252:35740-35759 None:intergenic 35.0%
ACACAATAACTGTTACCACA+TGG - tig0021252:35741-35760 None:intergenic 35.0%
TGTGGTAACAGTTATTGTGT+TGG + tig0021252:35741-35760 Msa1389320:CDS 35.0%
GTGGTAACAGTTATTGTGTT+GGG + tig0021252:35742-35761 Msa1389320:CDS 35.0%
! TATATGTGCAAGGTGTTAGA+AGG + tig0021252:35800-35819 Msa1389320:intron 35.0%
CTTTCTTGGATTCTTGTGTA+GGG + tig0021252:35844-35863 Msa1389320:intron 35.0%
TTTCTTGGATTCTTGTGTAG+GGG + tig0021252:35845-35864 Msa1389320:intron 35.0%
ATGTTTCAACCCATACGATT+GGG + tig0021252:36102-36121 Msa1389320:intron 35.0%
!! GTTTGTTATCAATCTTGTGC+AGG + tig0021252:36244-36263 Msa1389320:intron 35.0%
ACAGATTCTGTATCGAGTTT+AGG + tig0021252:36271-36290 Msa1389320:CDS 35.0%
TGAGCCACTGTAAGATTTAA+CGG - tig0021252:36471-36490 None:intergenic 35.0%
ATTCATCAAAACCAGCAATG+AGG - tig0021252:36516-36535 None:intergenic 35.0%
! GACTTCCTTATGTCGTTTAA+TGG + tig0021252:36568-36587 Msa1389320:CDS 35.0%
GAAGATAGATTACTACCATC+GGG - tig0021252:36628-36647 None:intergenic 35.0%
AGTACATATTGTTCTCCCTA+AGG - tig0021252:36719-36738 None:intergenic 35.0%
TTAGGGAGAACAATATGTAC+TGG + tig0021252:36718-36737 Msa1389320:intron 35.0%
!!! TTTTGGGTTCCATATTCTCA+AGG - tig0021252:36758-36777 None:intergenic 35.0%
AGAATATGGAACCCAAAAAG+TGG + tig0021252:36760-36779 Msa1389320:CDS 35.0%
!!! GAATGCTTTCTCCACTTTTT+GGG - tig0021252:36774-36793 None:intergenic 35.0%
!! TGAATGCTTTCTCCACTTTT+TGG - tig0021252:36775-36794 None:intergenic 35.0%
TTAGAAGTTCTCTTGTAGAC+AGG - tig0021252:36929-36948 None:intergenic 35.0%
AAAGGAGTTAGTTGTACAGT+AGG + tig0021252:37200-37219 Msa1389320:intron 35.0%
! TGGCCGACATTTTTGTAATA+AGG - tig0021252:37269-37288 None:intergenic 35.0%
!! AGAGTAGTTCTAATACTGTG+TGG - tig0021252:37289-37308 None:intergenic 35.0%
TCAGAGATTTATCCCTTTGA+GGG - tig0021252:37364-37383 None:intergenic 35.0%
ATCAGAGATTTATCCCTTTG+AGG - tig0021252:37365-37384 None:intergenic 35.0%
AATGTGGATCTTCTATCATC+CGG + tig0021252:37465-37484 Msa1389320:intron 35.0%
! CATATCAGATTTGCTCTACA+AGG - tig0021252:37645-37664 None:intergenic 35.0%
! AGAAAGATGTGGATTAAGCT+TGG + tig0021252:37878-37897 Msa1389320:intron 35.0%
! ATGCTTTATTACTCGTAACC+GGG + tig0021252:38053-38072 Msa1389320:intron 35.0%
GTATACATACAACAACTACC+CGG - tig0021252:38074-38093 None:intergenic 35.0%
AGCAAACGGGATGTAAATAT+TGG - tig0021252:38112-38131 None:intergenic 35.0%
AATATTTACATCCCGTTTGC+TGG + tig0021252:38111-38130 Msa1389320:intron 35.0%
TCCTTAAACACCCATTATGA+TGG + tig0021252:38300-38319 Msa1389320:intron 35.0%
ATGTTCACTACCACATAATG+GGG - tig0021252:38343-38362 None:intergenic 35.0%
CATGTTCACTACCACATAAT+GGG - tig0021252:38344-38363 None:intergenic 35.0%
ACATGTTCACTACCACATAA+TGG - tig0021252:38345-38364 None:intergenic 35.0%
GAATCTACAGGAGTAAATAC+AGG - tig0021252:38552-38571 None:intergenic 35.0%
TATTTACTCCTGTAGATTCC+TGG + tig0021252:38553-38572 Msa1389320:intron 35.0%
TAATAGATCCAGGAATCTAC+AGG - tig0021252:38564-38583 None:intergenic 35.0%
TATTCATTTCTGTAGATGCC+TGG + tig0021252:38590-38609 Msa1389320:intron 35.0%
TATCATCCAAAACAGAAACC+TGG + tig0021252:38616-38635 Msa1389320:intron 35.0%
TCAGAGCTCTTTAGACTATT+TGG + tig0021252:38666-38685 Msa1389320:intron 35.0%
CAGAGCTCTTTAGACTATTT+GGG + tig0021252:38667-38686 Msa1389320:intron 35.0%
ATTGATAAGCAAGAAGGTTG+TGG - tig0021252:38807-38826 None:intergenic 35.0%
GACCTTGCTTGATATTGATA+AGG - tig0021252:38894-38913 None:intergenic 35.0%
ATTCATGTCAAATTGCAGCT+TGG + tig0021252:38973-38992 Msa1389320:intron 35.0%
!! CAGCTTGGTCGATTTTATAT+AGG + tig0021252:38988-39007 Msa1389320:intron 35.0%
TTATATGCTCCAACTTGAGA+GGG - tig0021252:39116-39135 None:intergenic 35.0%
TTTATATGCTCCAACTTGAG+AGG - tig0021252:39117-39136 None:intergenic 35.0%
! AGAAGCATATTGAGATAGAC+TGG - tig0021252:39269-39288 None:intergenic 35.0%
AGTCGTGCTTAACAAATTGA+GGG - tig0021252:39294-39313 None:intergenic 35.0%
AAGTCGTGCTTAACAAATTG+AGG - tig0021252:39295-39314 None:intergenic 35.0%
!! CAATTTGTTAAGCACGACTT+AGG + tig0021252:39295-39314 Msa1389320:intron 35.0%
CTCAATATGAAATGAGCCTA+TGG - tig0021252:39330-39349 None:intergenic 35.0%
TGCTAAACATGTTAATCCCT+CGG - tig0021252:39592-39611 None:intergenic 35.0%
ACTTCAACTATTGCTCTTAC+TGG + tig0021252:39621-39640 Msa1389320:CDS 35.0%
TAATGTGAGACTCAACATTC+TGG - tig0021252:39840-39859 None:intergenic 35.0%
TTAGAAACTAATGTGGGGAA+GGG - tig0021252:39909-39928 None:intergenic 35.0%
! CTAACATATTTTCACGAGTC+AGG + tig0021252:39925-39944 Msa1389320:intron 35.0%
! GATTAGTCAAAAGTTTGGCT+TGG + tig0021252:40125-40144 Msa1389320:intron 35.0%
! GTAATCAACCCAACTGTTTT+TGG + tig0021252:40188-40207 Msa1389320:intron 35.0%
AAAAGGAACAAACTAGCACA+AGG - tig0021252:40334-40353 None:intergenic 35.0%
TCAATGGAACTTGAATGAGA+AGG - tig0021252:40469-40488 None:intergenic 35.0%
!! GCTAGTCTTAAAACATACCT+TGG - tig0021252:40508-40527 None:intergenic 35.0%
TGACTGTAACTCTATAATGC+GGG - tig0021252:40647-40666 None:intergenic 35.0%
CGTTGATGTTTGAAAGAAGT+AGG + tig0021252:40714-40733 Msa1389320:intron 35.0%
GTAATTCCATCTCATTCTCA+AGG + tig0021252:40830-40849 Msa1389320:intron 35.0%
ATCATTCCTTGAGAATGAGA+TGG - tig0021252:40839-40858 None:intergenic 35.0%
TCCTTAAAACTGTATGACAG+TGG + tig0021252:41050-41069 Msa1389320:intron 35.0%
! ACCACTGTCATACAGTTTTA+AGG - tig0021252:41054-41073 None:intergenic 35.0%
CATGGATAAAATGACCATCT+GGG + tig0021252:41094-41113 Msa1389320:CDS 35.0%
CGATTTCACCCATAAGAAAA+TGG - tig0021252:41298-41317 None:intergenic 35.0%
GAGTCTCACCATATTGAAAA+TGG - tig0021252:41348-41367 None:intergenic 35.0%
ATAGGATATGCATGAACATC+AGG - tig0021252:41437-41456 None:intergenic 35.0%
GAATGTGTCAGAACATTTAG+AGG + tig0021252:41615-41634 Msa1389320:CDS 35.0%
ATGCTTGTGTGCCAAAAAAA+GGG - tig0021252:41807-41826 None:intergenic 35.0%
CAAGCATGTATATGTCCTTT+AGG + tig0021252:41820-41839 Msa1389320:three_prime_UTR 35.0%
GAGTCAAAAACTGTTGCATA+AGG + tig0021252:41898-41917 Msa1389320:three_prime_UTR 35.0%
!! ATTTCTGCTCTAGAATGTCT+AGG - tig0021252:41941-41960 None:intergenic 35.0%
! GGTTGGCGTCTAAAATAACA+CGG - tig0021252:34808-34827 None:intergenic 40.0%
GGAGAAGAATATGAAGCAGT+GGG - tig0021252:35037-35056 None:intergenic 40.0%
AGGAGAAGAATATGAAGCAG+TGG - tig0021252:35038-35057 None:intergenic 40.0%
! CAGCTTTGTAGAAGTTGGAA+AGG - tig0021252:35058-35077 None:intergenic 40.0%
! TGGTTCAGCTTTGTAGAAGT+TGG - tig0021252:35063-35082 None:intergenic 40.0%
GATTCTGTGCATACATTCAC+TGG + tig0021252:35596-35615 Msa1389320:CDS 40.0%
CATACATTCACTGGTCATGA+TGG + tig0021252:35605-35624 Msa1389320:CDS 40.0%
! TGTTTTTCCTTTTTCCGTCC+TGG + tig0021252:35650-35669 Msa1389320:intron 40.0%
AATCAAACCAGGACGGAAAA+AGG - tig0021252:35660-35679 None:intergenic 40.0%
!! TTTTTCCGTCCTGGTTTGAT+TGG + tig0021252:35659-35678 Msa1389320:intron 40.0%
!! TTTTCCGTCCTGGTTTGATT+GGG + tig0021252:35660-35679 Msa1389320:intron 40.0%
GCTTTCTTGGATTCTTGTGT+AGG + tig0021252:35843-35862 Msa1389320:intron 40.0%
! TTTCTCTGGAGGATCCTTAA+TGG + tig0021252:35939-35958 Msa1389320:CDS 40.0%
GAGGATCCTTAATGGAGAAT+GGG + tig0021252:35947-35966 Msa1389320:CDS 40.0%
!! AGTGGTTAGTTTGTTAGGGT+AGG + tig0021252:36018-36037 Msa1389320:intron 40.0%
!! GTGGTTAGTTTGTTAGGGTA+GGG + tig0021252:36019-36038 Msa1389320:intron 40.0%
!! TGGTTAGTTTGTTAGGGTAG+GGG + tig0021252:36020-36039 Msa1389320:intron 40.0%
TAGTAGCAGAGATTGAACTC+TGG + tig0021252:36056-36075 Msa1389320:intron 40.0%
ACATCGAAGGAGTTCAATGT+AGG - tig0021252:36086-36105 None:intergenic 40.0%
GATGTTTCAACCCATACGAT+TGG + tig0021252:36101-36120 Msa1389320:intron 40.0%
ATGCAGATACCCAATCGTAT+GGG - tig0021252:36114-36133 None:intergenic 40.0%
TATGCAGATACCCAATCGTA+TGG - tig0021252:36115-36134 None:intergenic 40.0%
!! TGTGGCATTGGCATGATAAT+TGG + tig0021252:36183-36202 Msa1389320:intron 40.0%
! AGTTTAGGATTTAGCCACGA+TGG + tig0021252:36286-36305 Msa1389320:CDS 40.0%
! AATCTGAAAGGCACGTTAGA+TGG + tig0021252:36367-36386 Msa1389320:CDS 40.0%
GTTGCCGTTAAATCTTACAG+TGG + tig0021252:36464-36483 Msa1389320:intron 40.0%
GTTAAATCTTACAGTGGCTC+AGG + tig0021252:36470-36489 Msa1389320:intron 40.0%
CGTGACCATTAAACGACATA+AGG - tig0021252:36576-36595 None:intergenic 40.0%
ACGATGCAACCTTGAGAATA+TGG + tig0021252:36746-36765 Msa1389320:CDS 40.0%
! GTTTAAGATGCTTCGAACAC+CGG + tig0021252:36893-36912 Msa1389320:intron 40.0%
! CTCAAATTCTAGTTGAGGCA+AGG - tig0021252:37038-37057 None:intergenic 40.0%
! CGCTTCTCAAATTCTAGTTG+AGG - tig0021252:37043-37062 None:intergenic 40.0%
CAGTGATCTTATAGTGAGCT+AGG + tig0021252:37236-37255 Msa1389320:intron 40.0%
ATGAGAATTGGGCATCTAAC+CGG - tig0021252:37487-37506 None:intergenic 40.0%
AAAACCTTCTGATACTCCTC+TGG + tig0021252:37596-37615 Msa1389320:intron 40.0%
CTACATAGTCTACCCATACT+TGG + tig0021252:37726-37745 Msa1389320:intron 40.0%
CATCTTTCTCACAAACTGCT+AGG - tig0021252:37867-37886 None:intergenic 40.0%
AGCAGTTTGTGAGAAAGATG+TGG + tig0021252:37867-37886 Msa1389320:intron 40.0%
AGTCTTGCATATGCTCTCTT+GGG - tig0021252:37993-38012 None:intergenic 40.0%
AAACACACAACAATGGGGTT+TGG - tig0021252:38022-38041 None:intergenic 40.0%
ATTGGCAATATCCAGCAAAC+GGG - tig0021252:38125-38144 None:intergenic 40.0%
CATTGGCAATATCCAGCAAA+CGG - tig0021252:38126-38145 None:intergenic 40.0%
! CAAAGTGAGGAGTATGCTAA+TGG + tig0021252:38158-38177 Msa1389320:intron 40.0%
! GGTGACTGACTTTACAATAG+AGG + tig0021252:38179-38198 Msa1389320:intron 40.0%
AATCGGAACCTGATTGTTGT+TGG + tig0021252:38216-38235 Msa1389320:intron 40.0%
AACGGTTTCCAACAACAATC+AGG - tig0021252:38227-38246 None:intergenic 40.0%
CAAGTATAAGGCTCAACTTG+AGG - tig0021252:38253-38272 None:intergenic 40.0%
!! GCCATCATAATGGGTGTTTA+AGG - tig0021252:38304-38323 None:intergenic 40.0%
ATCTGCAGTGCCATCATAAT+GGG - tig0021252:38313-38332 None:intergenic 40.0%
AATCTGCAGTGCCATCATAA+TGG - tig0021252:38314-38333 None:intergenic 40.0%
TTATGATGGCACTGCAGATT+AGG + tig0021252:38314-38333 Msa1389320:intron 40.0%
TACTGCTTATTGCCTAGACA+AGG + tig0021252:38417-38436 Msa1389320:intron 40.0%
ACCTTAGTAGAAAGGGTAGT+TGG - tig0021252:38454-38473 None:intergenic 40.0%
!! CTGTTTTGGATGATAGATCC+AGG - tig0021252:38611-38630 None:intergenic 40.0%
AGCTCTTTAGACTATTTGGG+CGG + tig0021252:38670-38689 Msa1389320:intron 40.0%
CTAGATTTGACAACATTCCC+AGG - tig0021252:38723-38742 None:intergenic 40.0%
CTGGGAATGTTGTCAAATCT+AGG + tig0021252:38721-38740 Msa1389320:intron 40.0%
!! ACTGATTTGTGTACCTCTCA+AGG + tig0021252:39166-39185 Msa1389320:intron 40.0%
GTGTTCACTAAATCCTTGAG+AGG - tig0021252:39182-39201 None:intergenic 40.0%
GCTAGGGAGAAGATCAAATT+GGG - tig0021252:39240-39259 None:intergenic 40.0%
TGCTAGGGAGAAGATCAAAT+TGG - tig0021252:39241-39260 None:intergenic 40.0%
GTCGTGCTTAACAAATTGAG+GGG - tig0021252:39293-39312 None:intergenic 40.0%
AGAGAGACAAAGGAGACATA+TGG + tig0021252:39362-39381 Msa1389320:intron 40.0%
! CATATGGTGACACCATGTTT+TGG + tig0021252:39378-39397 Msa1389320:intron 40.0%
TGGTGTGTAGTTCCAAAACA+TGG - tig0021252:39393-39412 None:intergenic 40.0%
AACATGTTAATCCCTCGGTA+TGG - tig0021252:39587-39606 None:intergenic 40.0%
!! TATTGCTCTTACTGGTTCTG+TGG + tig0021252:39629-39648 Msa1389320:CDS 40.0%
GTTAGAAACTAATGTGGGGA+AGG - tig0021252:39910-39929 None:intergenic 40.0%
!! TAGTCAAAAGTTTGGCTTGG+TGG + tig0021252:40128-40147 Msa1389320:intron 40.0%
!! TTGGGTTGATTACCTACTCA+AGG - tig0021252:40181-40200 None:intergenic 40.0%
TAATGTGGTCTGTGTAGTAC+TGG + tig0021252:40257-40276 Msa1389320:intron 40.0%
TTGCAGCATGCAAAGACAAA+AGG - tig0021252:40351-40370 None:intergenic 40.0%
TCAAGTTCCATTGAGTGTGT+TGG + tig0021252:40475-40494 Msa1389320:CDS 40.0%
TCATGTCCATGTATGCTTGT+CGG + tig0021252:40570-40589 Msa1389320:intron 40.0%
GCATGGATAAAATGACCATC+TGG + tig0021252:41093-41112 Msa1389320:CDS 40.0%
TTTGTGAGCATGAGGTTTGT+TGG + tig0021252:41144-41163 Msa1389320:intron 40.0%
! TGTGGAGCCCATTTTCAATA+TGG + tig0021252:41337-41356 Msa1389320:intron 40.0%
TTTCCATTCTCTGAGCAGTA+TGG + tig0021252:41504-41523 Msa1389320:intron 40.0%
! ATGATGGAGCTGTGAGATTA+TGG + tig0021252:41577-41596 Msa1389320:CDS 40.0%
TGATGGAGCTGTGAGATTAT+GGG + tig0021252:41578-41597 Msa1389320:CDS 40.0%
TAATCACGAGTACCTTGTCT+CGG + tig0021252:41674-41693 Msa1389320:CDS 40.0%
! GCTCGTGTTTTCGATGTTAA+AGG + tig0021252:41714-41733 Msa1389320:CDS 40.0%
TGCTTGTGTGCCAAAAAAAG+GGG - tig0021252:41806-41825 None:intergenic 40.0%
CATGCTTGTGTGCCAAAAAA+AGG - tig0021252:41808-41827 None:intergenic 40.0%
!! GTATATGTCCTTTAGGACAG+CGG + tig0021252:41827-41846 Msa1389320:three_prime_UTR 40.0%
!! TATATGTCCTTTAGGACAGC+GGG + tig0021252:41828-41847 Msa1389320:three_prime_UTR 40.0%
! TGGCGTCTAAAATAACACGG+AGG - tig0021252:34805-34824 None:intergenic 45.0%
AAAGAGAACGCACCTGAGAA+TGG - tig0021252:34890-34909 None:intergenic 45.0%
!! AGTGCTGCTTTCACTTGTGT+AGG + tig0021252:34965-34984 Msa1389320:intron 45.0%
GGAAGAAGTTCATCGTCAGA+GGG - tig0021252:35340-35359 None:intergenic 45.0%
AGGAAGAAGTTCATCGTCAG+AGG - tig0021252:35341-35360 None:intergenic 45.0%
ATGTTACTATGTAGGCCACC+TGG - tig0021252:35421-35440 None:intergenic 45.0%
!! TTTGATTGGGTTGGGAACCT+AGG + tig0021252:35673-35692 Msa1389320:intron 45.0%
! AGAAGCACACTACAAGTCCT+AGG - tig0021252:35693-35712 None:intergenic 45.0%
CTTGTAGTGTGCTTCTCTCT+AGG + tig0021252:35697-35716 Msa1389320:intron 45.0%
CATGTTCAAATCTCCCCATG+TGG + tig0021252:35723-35742 Msa1389320:CDS 45.0%
! GTGATGACGTAGGATTTCTC+TGG + tig0021252:35925-35944 Msa1389320:CDS 45.0%
ATGACGTAGGATTTCTCTGG+AGG + tig0021252:35928-35947 Msa1389320:CDS 45.0%
GGAGGATCCTTAATGGAGAA+TGG + tig0021252:35946-35965 Msa1389320:CDS 45.0%
!! GGTTAGTTTGTTAGGGTAGG+GGG + tig0021252:36021-36040 Msa1389320:intron 45.0%
TCGAAGGAGTTCAATGTAGG+AGG - tig0021252:36083-36102 None:intergenic 45.0%
! CGTATGGGTTGAAACATCGA+AGG - tig0021252:36099-36118 None:intergenic 45.0%
!! CTGGCATCAGGAAGTTTTGA+TGG + tig0021252:36316-36335 Msa1389320:CDS 45.0%
! GTTAAAATCTGGGATGCGTC+TGG + tig0021252:36343-36362 Msa1389320:CDS 45.0%
GATGCGTCTGGAAATCTGAA+AGG + tig0021252:36355-36374 Msa1389320:CDS 45.0%
AAATCTTACAGTGGCTCAGG+TGG + tig0021252:36473-36492 Msa1389320:intron 45.0%
GCAATGAGGACATTTCCTCT+TGG - tig0021252:36502-36521 None:intergenic 45.0%
AGAGGAAATGTCCTCATTGC+TGG + tig0021252:36502-36521 Msa1389320:CDS 45.0%
TTGATGAATCCTCCTCAGTG+TGG + tig0021252:36527-36546 Msa1389320:CDS 45.0%
! ATGTCGTTTAATGGTCACGC+TGG + tig0021252:36577-36596 Msa1389320:CDS 45.0%
ATCGGGAGTAAAATCACCAC+AGG - tig0021252:36611-36630 None:intergenic 45.0%
! TGTGGTGATTTTACTCCCGA+TGG + tig0021252:36610-36629 Msa1389320:CDS 45.0%
!! GAAAGCATTCATGTTGTGCG+AGG + tig0021252:36784-36803 Msa1389320:CDS 45.0%
AGTTCTCTTGTAGACAGGAG+AGG - tig0021252:36924-36943 None:intergenic 45.0%
GTGAGTGAGCAAAGGAAAGT+TGG + tig0021252:37329-37348 Msa1389320:intron 45.0%
TTGGTATCAGACACCCTCAA+AGG + tig0021252:37348-37367 Msa1389320:intron 45.0%
TGGTATCAGACACCCTCAAA+GGG + tig0021252:37349-37368 Msa1389320:intron 45.0%
TGGTCAAAGAAAGCCACTAG+TGG - tig0021252:37407-37426 None:intergenic 45.0%
AATTTACTCCCAACCTCCAG+AGG - tig0021252:37615-37634 None:intergenic 45.0%
! CATTTGGGATCGGCTAGAAA+AGG - tig0021252:37770-37789 None:intergenic 45.0%
ACACTGGGTGTGAAAAGAGA+GGG + tig0021252:37939-37958 Msa1389320:intron 45.0%
GAGTCTTGCATATGCTCTCT+TGG - tig0021252:37994-38013 None:intergenic 45.0%
ACCCCATTGTTGTGTGTTTG+AGG + tig0021252:38023-38042 Msa1389320:intron 45.0%
CCCTCAAACACACAACAATG+GGG - tig0021252:38027-38046 None:intergenic 45.0%
CCCCATTGTTGTGTGTTTGA+GGG + tig0021252:38024-38043 Msa1389320:intron 45.0%
GCCCTCAAACACACAACAAT+GGG - tig0021252:38028-38047 None:intergenic 45.0%
TGCCCTCAAACACACAACAA+TGG - tig0021252:38029-38048 None:intergenic 45.0%
CTTTGACGCTCACTCATCAT+TGG - tig0021252:38143-38162 None:intergenic 45.0%
AGGCTCAACTTGAGGCAAAA+CGG - tig0021252:38245-38264 None:intergenic 45.0%
! TTCACTACCACATAATGGGG+TGG - tig0021252:38340-38359 None:intergenic 45.0%
GCCAACTACCCTTTCTACTA+AGG + tig0021252:38450-38469 Msa1389320:intron 45.0%
TACAGGTAGCAGCAACAAGA+GGG - tig0021252:38535-38554 None:intergenic 45.0%
ATACAGGTAGCAGCAACAAG+AGG - tig0021252:38536-38555 None:intergenic 45.0%
!! AGAGTGCCAGGTTTCTGTTT+TGG - tig0021252:38625-38644 None:intergenic 45.0%
GCTCTTTAGACTATTTGGGC+GGG + tig0021252:38671-38690 Msa1389320:intron 45.0%
CTCTTTAGACTATTTGGGCG+GGG + tig0021252:38672-38691 Msa1389320:intron 45.0%
TTTGACAACATTCCCAGGAC+AGG - tig0021252:38718-38737 None:intergenic 45.0%
TTCAACACTCCCTCTCAAGT+TGG + tig0021252:39104-39123 Msa1389320:intron 45.0%
GATAGACTGGCACATTGCTA+GGG - tig0021252:39256-39275 None:intergenic 45.0%
AGATAGACTGGCACATTGCT+AGG - tig0021252:39257-39276 None:intergenic 45.0%
TGTTAAGCACGACTTAGGGT+TGG + tig0021252:39300-39319 Msa1389320:intron 45.0%
AGAGTGAGAGAGAGAGACAA+AGG + tig0021252:39352-39371 Msa1389320:intron 45.0%
GTTAATCCCTCGGTATGGTA+TGG - tig0021252:39582-39601 None:intergenic 45.0%
ACACTATGAGCTCCTTGAGT+AGG + tig0021252:40166-40185 Msa1389320:intron 45.0%
! GTGATGAAAGTTTGGAGCCT+TGG - tig0021252:40307-40326 None:intergenic 45.0%
GGAACTTGAATGAGAAGGCA+GGG - tig0021252:40464-40483 None:intergenic 45.0%
TGGAACTTGAATGAGAAGGC+AGG - tig0021252:40465-40484 None:intergenic 45.0%
TGCGAATCCAACACACTCAA+TGG - tig0021252:40485-40504 None:intergenic 45.0%
CATGATCCGACAAGCATACA+TGG - tig0021252:40579-40598 None:intergenic 45.0%
TGTCGGATCATGCATGTGTA+TGG + tig0021252:40587-40606 Msa1389320:intron 45.0%
ACCGTCAGTGACTTTGTTCA+CGG + tig0021252:40788-40807 Msa1389320:intron 45.0%
ACCGTGAACAAAGTCACTGA+CGG - tig0021252:40792-40811 None:intergenic 45.0%
AACTGTATGACAGTGGTTCC+TGG + tig0021252:41057-41076 Msa1389320:intron 45.0%
ACTGTATGACAGTGGTTCCT+GGG + tig0021252:41058-41077 Msa1389320:intron 45.0%
CTCATGCTCACAAATGCTTC+GGG - tig0021252:41138-41157 None:intergenic 45.0%
CCTCATGCTCACAAATGCTT+CGG - tig0021252:41139-41158 None:intergenic 45.0%
TGTTAGAACTACTCGACGAG+AGG - tig0021252:41240-41259 None:intergenic 45.0%
TTCTTATGGGTGAAATCGGG+TGG + tig0021252:41300-41319 Msa1389320:intron 45.0%
TCTTATGGGTGAAATCGGGT+GGG + tig0021252:41301-41320 Msa1389320:intron 45.0%
TGGGCTCCACATAAAGTTGT+GGG - tig0021252:41328-41347 None:intergenic 45.0%
ATGGGCTCCACATAAAGTTG+TGG - tig0021252:41329-41348 None:intergenic 45.0%
ACTCCATACTGCTCAGAGAA+TGG - tig0021252:41510-41529 None:intergenic 45.0%
ATGGAGTGACATGTTCAACC+TGG + tig0021252:41523-41542 Msa1389320:CDS 45.0%
GTGGCTACTGGATCTAATGA+TGG + tig0021252:41561-41580 Msa1389320:CDS 45.0%
AGATTATGGGACAGTCGATC+TGG + tig0021252:41591-41610 Msa1389320:CDS 45.0%
GATCTAAAGAAGCCGAGACA+AGG - tig0021252:41689-41708 None:intergenic 45.0%
! CAACAATCTGGCTTCTGTAG+AGG - tig0021252:41858-41877 None:intergenic 45.0%
!! ATTCAAAATTAATATTAAAA+AGG - tig0021252:41989-42008 None:intergenic 5.0%
CATCGTCAGAGGGAACTTCA+TGG - tig0021252:35330-35349 None:intergenic 50.0%
ACTATGTAGGCCACCTGGAT+CGG - tig0021252:35416-35435 None:intergenic 50.0%
!! ATCGCAGATGGTGATGGTGA+TGG + tig0021252:35500-35519 Msa1389320:intron 50.0%
!! GATGGTGATGGTGATGGTGA+TGG + tig0021252:35506-35525 Msa1389320:intron 50.0%
!! GATGGTGATGGTGATGGTGA+TGG + tig0021252:35506-35525 Msa1389320:intron 50.0%
!! GATGGTGATGGTGATGGTGA+TGG + tig0021252:35506-35525 Msa1389320:intron 50.0%
CCAACCCAATCAAACCAGGA+CGG - tig0021252:35667-35686 None:intergenic 50.0%
! CGTCCTGGTTTGATTGGGTT+GGG + tig0021252:35665-35684 Msa1389320:intron 50.0%
GTTCCCAACCCAATCAAACC+AGG - tig0021252:35671-35690 None:intergenic 50.0%
CCACAAGTGCCTCATCTGTT+GGG - tig0021252:35893-35912 None:intergenic 50.0%
GGGAAGCCCATTCTCCATTA+AGG - tig0021252:35956-35975 None:intergenic 50.0%
! GAATGGGCTTCCCAGCTTAA+TGG + tig0021252:35963-35982 Msa1389320:CDS 50.0%
TAGCCACGATGGAACGTTTC+TGG + tig0021252:36297-36316 Msa1389320:CDS 50.0%
ATGCCAGAAACGTTCCATCG+TGG - tig0021252:36303-36322 None:intergenic 50.0%
!! GATGGAACGTTTCTGGCATC+AGG + tig0021252:36304-36323 Msa1389320:CDS 50.0%
GCACGTTAGATGGTCCTGAA+GGG + tig0021252:36377-36396 Msa1389320:CDS 50.0%
CACGTTAGATGGTCCTGAAG+GGG + tig0021252:36378-36397 Msa1389320:CDS 50.0%
ACGTTAGATGGTCCTGAAGG+GGG + tig0021252:36379-36398 Msa1389320:CDS 50.0%
AATCCTCCTCAGTGTGGATG+TGG + tig0021252:36533-36552 Msa1389320:CDS 50.0%
ATTCCACATCCACACTGAGG+AGG - tig0021252:36539-36558 None:intergenic 50.0%
GCTATTCCACATCCACACTG+AGG - tig0021252:36542-36561 None:intergenic 50.0%
CTACTCTTTAACATGCCCCC+TGG + tig0021252:37302-37321 Msa1389320:intron 50.0%
! AGGCTTTAGTTGGCCACTAG+TGG + tig0021252:37391-37410 Msa1389320:intron 50.0%
! GGGGACTGAAATGATGATGC+TGG + tig0021252:37525-37544 Msa1389320:intron 50.0%
ACCTTCTGATACTCCTCTGG+AGG + tig0021252:37599-37618 Msa1389320:intron 50.0%
!! ACCTCCAGAGGAGTATCAGA+AGG - tig0021252:37603-37622 None:intergenic 50.0%
! TCTGATACTCCTCTGGAGGT+TGG + tig0021252:37603-37622 Msa1389320:intron 50.0%
! CTGATACTCCTCTGGAGGTT+GGG + tig0021252:37604-37623 Msa1389320:intron 50.0%
TGGGATCGGCTAGAAAAGGA+AGG - tig0021252:37766-37785 None:intergenic 50.0%
GGTGAGCTGGACAATATCCT+AGG - tig0021252:37846-37865 None:intergenic 50.0%
TCACAAACTGCTAGGTGAGC+TGG - tig0021252:37859-37878 None:intergenic 50.0%
AAGATGTGCTGTGACGACAC+TGG + tig0021252:37923-37942 Msa1389320:intron 50.0%
AGATGTGCTGTGACGACACT+GGG + tig0021252:37924-37943 Msa1389320:intron 50.0%
GACACTGGGTGTGAAAAGAG+AGG + tig0021252:37938-37957 Msa1389320:intron 50.0%
GCATATGCTCTCTTGGGTCT+AGG - tig0021252:37987-38006 None:intergenic 50.0%
GATGAGTGAGCGTCAAAGTG+AGG + tig0021252:38145-38164 Msa1389320:intron 50.0%
GATTAGGCCACCCCATTATG+TGG + tig0021252:38330-38349 Msa1389320:intron 50.0%
GCAGACAATGTGCCTTGTCT+AGG - tig0021252:38432-38451 None:intergenic 50.0%
CAGCAACAAGAGGGTTCCAT+GGG - tig0021252:38526-38545 None:intergenic 50.0%
ACAGAAACCTGGCACTCTCA+TGG + tig0021252:38627-38646 Msa1389320:intron 50.0%
!! TGTAAGACCATGAGAGTGCC+AGG - tig0021252:38637-38656 None:intergenic 50.0%
TTTAGACTATTTGGGCGGGG+AGG + tig0021252:38675-38694 Msa1389320:intron 50.0%
TTAGACTATTTGGGCGGGGA+GGG + tig0021252:38676-38695 Msa1389320:intron 50.0%
TCTTACGTTCAGACCTGTCC+TGG + tig0021252:38702-38721 Msa1389320:intron 50.0%
CTTACGTTCAGACCTGTCCT+GGG + tig0021252:38703-38722 Msa1389320:intron 50.0%
GAAGCTATAGTGAGTGTGCC+AGG - tig0021252:38946-38965 None:intergenic 50.0%
!! ACTTAGGGTTGGCTCTCCAT+AGG + tig0021252:39311-39330 Msa1389320:intron 50.0%
AGGTCATCCATACCATACCG+AGG + tig0021252:39572-39591 Msa1389320:intron 50.0%
GGTCATCCATACCATACCGA+GGG + tig0021252:39573-39592 Msa1389320:intron 50.0%
!! GCTCTTACTGGTTCTGTGGA+TGG + tig0021252:39633-39652 Msa1389320:CDS 50.0%
CTGCAAGAGCTGACTAACCA+AGG + tig0021252:40287-40306 Msa1389320:intron 50.0%
AGTGTGTTGGATTCGCACCA+AGG + tig0021252:40488-40507 Msa1389320:CDS 50.0%
GCACGAATGCACATAGACAC+AGG - tig0021252:40544-40563 None:intergenic 50.0%
CTCACAAATGCTTCGGGCTA+AGG - tig0021252:41132-41151 None:intergenic 50.0%
! CCGAAGCATTTGTGAGCATG+AGG + tig0021252:41136-41155 Msa1389320:CDS 50.0%
TAGAACTACTCGACGAGAGG+AGG - tig0021252:41237-41256 None:intergenic 50.0%
GTGGGTCCCACAACTTTATG+TGG + tig0021252:41319-41338 Msa1389320:intron 50.0%
GTGACATGTTCAACCTGGCT+TGG + tig0021252:41528-41547 Msa1389320:CDS 50.0%
GCACCTGAGAATGGAGACGA+CGG - tig0021252:34881-34900 None:intergenic 55.0%
GGATTGTCGTCAGGTGCATC+AGG - tig0021252:35361-35380 None:intergenic 55.0%
GCACCTGACGACAATCCAGA+TGG + tig0021252:35364-35383 Msa1389320:CDS 55.0%
CCACCATCTGGATTGTCGTC+AGG - tig0021252:35370-35389 None:intergenic 55.0%
CCTGACGACAATCCAGATGG+TGG + tig0021252:35367-35386 Msa1389320:CDS 55.0%
CTATGTAGGCCACCTGGATC+GGG - tig0021252:35415-35434 None:intergenic 55.0%
!! GGTGATGGTGATGGTGATGG+TGG + tig0021252:35509-35528 Msa1389320:CDS 55.0%
!! GATGGTGATGGTGATGGTGG+TGG + tig0021252:35524-35543 Msa1389320:CDS 55.0%
!! GATGGTGATGGTGGTGGTGA+TGG + tig0021252:35530-35549 Msa1389320:CDS 55.0%
! CCGTCCTGGTTTGATTGGGT+TGG + tig0021252:35664-35683 Msa1389320:intron 55.0%
! CCCAACAGATGAGGCACTTG+TGG + tig0021252:35890-35909 Msa1389320:CDS 55.0%
GCCACAAGTGCCTCATCTGT+TGG - tig0021252:35894-35913 None:intergenic 55.0%
! GATGAGGCACTTGTGGCAAC+AGG + tig0021252:35897-35916 Msa1389320:CDS 55.0%
! ACAGGAGCTGGTGATGACGT+AGG + tig0021252:35915-35934 Msa1389320:CDS 55.0%
!! AGTTTGTTAGGGTAGGGGGC+TGG + tig0021252:36025-36044 Msa1389320:intron 55.0%
GGCACGTTAGATGGTCCTGA+AGG + tig0021252:36376-36395 Msa1389320:CDS 55.0%
CTTACCTCAACTCCCCCTTC+AGG - tig0021252:36394-36413 None:intergenic 55.0%
AGGGGGAGTTGAGGTAAGAC+TGG + tig0021252:36396-36415 Msa1389320:intron 55.0%
!! GTAGACAGGAGAGGTGTTGC+CGG - tig0021252:36915-36934 None:intergenic 55.0%
TCTTTAACATGCCCCCTGGC+AGG + tig0021252:37306-37325 Msa1389320:intron 55.0%
CTTTAACATGCCCCCTGGCA+GGG + tig0021252:37307-37326 Msa1389320:intron 55.0%
TTTGCTCACTCACCCTGCCA+GGG - tig0021252:37322-37341 None:intergenic 55.0%
CAACAAGAGGGTTCCATGGG+CGG - tig0021252:38523-38542 None:intergenic 55.0%
GCAGCAACAAGAGGGTTCCA+TGG - tig0021252:38527-38546 None:intergenic 55.0%
TAGACTATTTGGGCGGGGAG+GGG + tig0021252:38677-38696 Msa1389320:intron 55.0%
AGTGGTTCCTGGGCTGCAAT+TGG + tig0021252:41068-41087 Msa1389320:intron 55.0%
! GGAGTGCTCTACATCCCAGA+TGG - tig0021252:41111-41130 None:intergenic 55.0%
CACATACGATGTGCCAAGCC+AGG - tig0021252:41544-41563 None:intergenic 55.0%
!! CTGGCTTGGCACATCGTATG+TGG + tig0021252:41542-41561 Msa1389320:CDS 55.0%
GGCACATCGTATGTGGCTAC+TGG + tig0021252:41549-41568 Msa1389320:CDS 55.0%
CCTGAGAATGGAGACGACGG+CGG - tig0021252:34878-34897 None:intergenic 60.0%
!! GGTGATGGTGGTGGTGATGG+TGG + tig0021252:35533-35552 Msa1389320:CDS 60.0%
!! GATGGTGGTGGTGATGGTGG+TGG + tig0021252:35536-35555 Msa1389320:CDS 60.0%
!! GGTGGTGGTGGTGGTGGTAA+TGG + tig0021252:35557-35576 Msa1389320:CDS 60.0%
!! GGTGGTGGTGGTGGTAATGG+TGG + tig0021252:35560-35579 Msa1389320:CDS 60.0%
!! GGTGGTGGTGGTAATGGTGG+TGG + tig0021252:35563-35582 Msa1389320:CDS 60.0%
TGCCTGCAGCCCAACAGATG+AGG + tig0021252:35881-35900 Msa1389320:CDS 60.0%
TGCCTCATCTGTTGGGCTGC+AGG - tig0021252:35886-35905 None:intergenic 60.0%
GCACTTGTGGCAACAGGAGC+TGG + tig0021252:35903-35922 Msa1389320:CDS 60.0%
TGGTCCTGAAGGGGGAGTTG+AGG + tig0021252:36387-36406 Msa1389320:CDS 60.0%
TGGCTCAGGTGGCATCCAAG+AGG + tig0021252:36484-36503 Msa1389320:CDS 60.0%
! CACGCTGGTAGTGTGACCTG+TGG + tig0021252:36592-36611 Msa1389320:CDS 60.0%
TTGCTCACTCACCCTGCCAG+GGG - tig0021252:37321-37340 None:intergenic 60.0%
CTTTGCTCACTCACCCTGCC+AGG - tig0021252:37323-37342 None:intergenic 60.0%
CTGGCAGGGTGAGTGAGCAA+AGG + tig0021252:37321-37340 Msa1389320:intron 60.0%
TTTATGGAGCCCTCCGCCCA+TGG + tig0021252:38507-38526 Msa1389320:intron 60.0%
AAGAGGGTTCCATGGGCGGA+GGG - tig0021252:38519-38538 None:intergenic 60.0%
AGACTATTTGGGCGGGGAGG+GGG + tig0021252:38678-38697 Msa1389320:intron 60.0%
GGTTCCTGGGCTGCAATTGG+AGG + tig0021252:41071-41090 Msa1389320:CDS 60.0%
CATGCCTCCAATTGCAGCCC+AGG - tig0021252:41078-41097 None:intergenic 60.0%
CTGGGCTGCAATTGGAGGCA+TGG + tig0021252:41076-41095 Msa1389320:CDS 60.0%
AGGAACGCCCGCTGTCCTAA+AGG - tig0021252:41838-41857 None:intergenic 60.0%
GAGAATGGAGACGACGGCGG+CGG - tig0021252:34875-34894 None:intergenic 65.0%
CCGCCGTCGTCTCCATTCTC+AGG + tig0021252:34875-34894 Msa1389320:five_prime_UTR 65.0%
GGAGGATCAGGGCCACCATC+TGG - tig0021252:35382-35401 None:intergenic 65.0%
! GATGGTGGCCCTGATCCTCC+TGG + tig0021252:35382-35401 Msa1389320:CDS 65.0%
GAGAGCCGCCAGGAGGATCA+GGG - tig0021252:35393-35412 None:intergenic 65.0%
!! GGTGGTGGTGATGGTGGTGG+TGG + tig0021252:35539-35558 Msa1389320:CDS 65.0%
!! GGTGGTGATGGTGGTGGTGG+TGG + tig0021252:35542-35561 Msa1389320:CDS 65.0%
!! GGTGATGGTGGTGGTGGTGG+TGG + tig0021252:35545-35564 Msa1389320:CDS 65.0%
!! GATGGTGGTGGTGGTGGTGG+TGG + tig0021252:35548-35567 Msa1389320:CDS 65.0%
TGCTCACTCACCCTGCCAGG+GGG - tig0021252:37320-37339 None:intergenic 65.0%
CAAGAGGGTTCCATGGGCGG+AGG - tig0021252:38520-38539 None:intergenic 65.0%
GGTGGCCCTGATCCTCCTGG+CGG + tig0021252:35385-35404 Msa1389320:CDS 70.0%
GGAGAGCCGCCAGGAGGATC+AGG - tig0021252:35394-35413 None:intergenic 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG + tig0021252:35551-35570 Msa1389320:CDS 70.0%
CGACGGCGGCGGCTGCTGTA+TGG - tig0021252:34864-34883 None:intergenic 75.0%
GGATCGGGAGAGCCGCCAGG+AGG - tig0021252:35400-35419 None:intergenic 75.0%
CCTGGATCGGGAGAGCCGCC+AGG - tig0021252:35403-35422 None:intergenic 75.0%
CCTGGCGGCTCTCCCGATCC+AGG + tig0021252:35400-35419 Msa1389320:CDS 75.0%
GGCGGCTCTCCCGATCCAGG+TGG + tig0021252:35403-35422 Msa1389320:intron 75.0%
Chromosome Type Strat End Strand Name
tig0021252 gene 34791 42085 34791 ID=Msa1389320;Name=Msa1389320
tig0021252 mRNA 34791 42085 34791 ID=Msa1389320-mRNA-1;Parent=Msa1389320;Name=Msa1389320-mRNA-1;_AED=0.12;_eAED=0.12;_QI=175|0.81|0.83|0.91|0.90|0.83|12|339|437
tig0021252 exon 34791 34896 34791 ID=Msa1389320-mRNA-1:exon:11545;Parent=Msa1389320-mRNA-1
tig0021252 exon 35187 35421 35187 ID=Msa1389320-mRNA-1:exon:11546;Parent=Msa1389320-mRNA-1
tig0021252 exon 35507 35626 35507 ID=Msa1389320-mRNA-1:exon:11547;Parent=Msa1389320-mRNA-1
tig0021252 exon 35719 35763 35719 ID=Msa1389320-mRNA-1:exon:11548;Parent=Msa1389320-mRNA-1
tig0021252 exon 35865 35984 35865 ID=Msa1389320-mRNA-1:exon:11549;Parent=Msa1389320-mRNA-1
tig0021252 exon 36266 36408 36266 ID=Msa1389320-mRNA-1:exon:11550;Parent=Msa1389320-mRNA-1
tig0021252 exon 36484 36631 36484 ID=Msa1389320-mRNA-1:exon:11551;Parent=Msa1389320-mRNA-1
tig0021252 exon 36722 36805 36722 ID=Msa1389320-mRNA-1:exon:11552;Parent=Msa1389320-mRNA-1
tig0021252 exon 39574 39689 39574 ID=Msa1389320-mRNA-1:exon:11553;Parent=Msa1389320-mRNA-1
tig0021252 exon 40451 40509 40451 ID=Msa1389320-mRNA-1:exon:11554;Parent=Msa1389320-mRNA-1
tig0021252 exon 41070 41157 41070 ID=Msa1389320-mRNA-1:exon:11555;Parent=Msa1389320-mRNA-1
tig0021252 exon 41522 42085 41522 ID=Msa1389320-mRNA-1:exon:11556;Parent=Msa1389320-mRNA-1
tig0021252 five_prime_UTR 34791 34896 34791 ID=Msa1389320-mRNA-1:five_prime_utr;Parent=Msa1389320-mRNA-1
tig0021252 five_prime_UTR 35187 35255 35187 ID=Msa1389320-mRNA-1:five_prime_utr;Parent=Msa1389320-mRNA-1
tig0021252 CDS 35256 35421 35256 ID=Msa1389320-mRNA-1:cds;Parent=Msa1389320-mRNA-1
tig0021252 CDS 35507 35626 35507 ID=Msa1389320-mRNA-1:cds;Parent=Msa1389320-mRNA-1
tig0021252 CDS 35719 35763 35719 ID=Msa1389320-mRNA-1:cds;Parent=Msa1389320-mRNA-1
tig0021252 CDS 35865 35984 35865 ID=Msa1389320-mRNA-1:cds;Parent=Msa1389320-mRNA-1
tig0021252 CDS 36266 36408 36266 ID=Msa1389320-mRNA-1:cds;Parent=Msa1389320-mRNA-1
tig0021252 CDS 36484 36631 36484 ID=Msa1389320-mRNA-1:cds;Parent=Msa1389320-mRNA-1
tig0021252 CDS 36722 36805 36722 ID=Msa1389320-mRNA-1:cds;Parent=Msa1389320-mRNA-1
tig0021252 CDS 39574 39689 39574 ID=Msa1389320-mRNA-1:cds;Parent=Msa1389320-mRNA-1
tig0021252 CDS 40451 40509 40451 ID=Msa1389320-mRNA-1:cds;Parent=Msa1389320-mRNA-1
tig0021252 CDS 41070 41157 41070 ID=Msa1389320-mRNA-1:cds;Parent=Msa1389320-mRNA-1
tig0021252 CDS 41522 41746 41522 ID=Msa1389320-mRNA-1:cds;Parent=Msa1389320-mRNA-1
tig0021252 three_prime_UTR 41747 42085 41747 ID=Msa1389320-mRNA-1:three_prime_utr;Parent=Msa1389320-mRNA-1
Gene Sequence

>Msa1389320

ATGATGATGAAATTCAACAACGATGAAGACGAAGACAACAATGATGTTTTCATTGATGACTCTGATATCATCCATGAAGTTCCCTCTGACGATGAACTTCTTCCTGATGCACCTGACGACAATCCAGATGGTGGCCCTGATCCTCCTGGCGGCTCTCCCGATCCAGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGGTAATGGTGGTGGTTATGACGATGATTCTGTGCATACATTCACTGGTCATGATGGTTTCATGTTCAAATCTCCCCATGTGGTAACAGTTATTGTGTTGGGGGAGTTATATACAGTTGCCTGCAGCCCAACAGATGAGGCACTTGTGGCAACAGGAGCTGGTGATGACGTAGGATTTCTCTGGAGGATCCTTAATGGAGAATGGGCTTCCCAGCTTAATGGTCATACAGATTCTGTATCGAGTTTAGGATTTAGCCACGATGGAACGTTTCTGGCATCAGGAAGTTTTGATGGAACTGTTAAAATCTGGGATGCGTCTGGAAATCTGAAAGGCACGTTAGATGGTCCTGAAGGGGGAGTTGAGTGGCTCAGGTGGCATCCAAGAGGAAATGTCCTCATTGCTGGTTTTGATGAATCCTCCTCAGTGTGGATGTGGAATAGCAATCTTGACTTCCTTATGTCGTTTAATGGTCACGCTGGTAGTGTGACCTGTGGTGATTTTACTCCCGATGGGAGAACAATATGTACTGGTTCTGACGATGCAACCTTGAGAATATGGAACCCAAAAAGTGGAGAAAGCATTCATGTTGTGCGAGGTCATCCATACCATACCGAGGGATTAACATGTTTAGCAATAAATTCAACTTCAACTATTGCTCTTACTGGTTCTGTGGATGGATCTGTTCATATTGTGAATATCACTACAGGAAGAGTTGTTAGTACCCTGCCTTCTCATTCAAGTTCCATTGAGTGTGTTGGATTCGCACCAAGTGGTTCCTGGGCTGCAATTGGAGGCATGGATAAAATGACCATCTGGGATGTAGAGCACTCCTTAGCCCGAAGCATTTGTGAGCATGAGTATGGAGTGACATGTTCAACCTGGCTTGGCACATCGTATGTGGCTACTGGATCTAATGATGGAGCTGTGAGATTATGGGACAGTCGATCTGGTGAATGTGTCAGAACATTTAGAGGGCACTCTGAAAGCATTCAATCTCTTTCTTTGTCTGCTAATCACGAGTACCTTGTCTCGGCTTCTTTAGATCATACAGCTCGTGTTTTCGATGTTAAAGGAGTTTGTTAA
Protein sequence

>Msa1389320

MMMKFNNDEDEDNNDVFIDDSDIIHEVPSDDELLPDAPDDNPDGGPDPPGGSPDPDGDGDGDGDGDGGGDGGGGGGGGNGGGYDDDSVHTFTGHDGFMFKSPHVVTVIVLGELYTVACSPTDEALVATGAGDDVGFLWRILNGEWASQLNGHTDSVSSLGFSHDGTFLASGSFDGTVKIWDASGNLKGTLDGPEGGVEWLRWHPRGNVLIAGFDESSSVWMWNSNLDFLMSFNGHAGSVTCGDFTPDGRTICTGSDDATLRIWNPKSGESIHVVRGHPYHTEGLTCLAINSTSTIALTGSVDGSVHIVNITTGRVVSTLPSHSSSIECVGFAPSGSWAAIGGMDKMTIWDVEHSLARSICEHEYGVTCSTWLGTSYVATGSNDGAVRLWDSRSGECVRTFRGHSESIQSLSLSANHEYLVSASLDHTARVFDVKGVC*