Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633390 | XP_013455059.1 | 98.807 | 419 | 5 | 0 | 18 | 436 | 1 | 419 | 0.0 | 860 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633390 | sp|F4KGE8|GIL1_ARATH | 33.990 | 406 | 230 | 9 | 52 | 429 | 160 | 555 | 3.60e-65 | 221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0633390 | Msa1222620 | 0.826106 | 3.254525e-54 | -8.615850e-47 |
| Msa0633390 | Msa1334250 | 0.829596 | 4.711645e-55 | -8.615850e-47 |
| Msa0178620 | Msa0633390 | 0.801263 | 9.779653e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633390 | MtrunA17_Chr4g0011611 | 98.807 | 419 | 5 | 0 | 18 | 436 | 1 | 419 | 0.0 | 860 |
| Msa0633390 | MtrunA17_Chr2g0315531 | 40.351 | 399 | 220 | 5 | 42 | 429 | 59 | 450 | 4.22e-94 | 291 |
| Msa0633390 | MtrunA17_Chr8g0379551 | 36.916 | 428 | 240 | 5 | 19 | 430 | 59 | 472 | 1.96e-93 | 290 |
| Msa0633390 | MtrunA17_Chr8g0359791 | 40.874 | 389 | 213 | 8 | 51 | 432 | 33 | 411 | 5.03e-88 | 274 |
| Msa0633390 | MtrunA17_Chr7g0230481 | 37.783 | 397 | 220 | 4 | 55 | 436 | 145 | 529 | 8.37e-87 | 274 |
| Msa0633390 | MtrunA17_Chr5g0432511 | 41.089 | 404 | 193 | 11 | 41 | 430 | 1 | 373 | 2.92e-86 | 268 |
| Msa0633390 | MtrunA17_Chr3g0103691 | 35.589 | 399 | 224 | 8 | 52 | 429 | 91 | 477 | 7.32e-70 | 229 |
| Msa0633390 | MtrunA17_Chr2g0329091 | 26.623 | 308 | 180 | 12 | 147 | 427 | 295 | 583 | 5.92e-16 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633390 | AT2G45260.1 | 76.526 | 426 | 92 | 4 | 18 | 436 | 1 | 425 | 0.0 | 681 |
| Msa0633390 | AT4G34080.1 | 75.532 | 282 | 62 | 3 | 41 | 316 | 1 | 281 | 2.15e-151 | 431 |
| Msa0633390 | AT4G33320.1 | 71.875 | 288 | 73 | 4 | 41 | 321 | 1 | 287 | 1.49e-141 | 406 |
| Msa0633390 | AT3G14870.4 | 40.253 | 395 | 209 | 5 | 51 | 430 | 80 | 462 | 1.85e-92 | 287 |
| Msa0633390 | AT3G14870.5 | 40.253 | 395 | 209 | 5 | 51 | 430 | 80 | 462 | 1.85e-92 | 287 |
| Msa0633390 | AT3G14870.2 | 40.253 | 395 | 209 | 5 | 51 | 430 | 80 | 462 | 1.85e-92 | 287 |
| Msa0633390 | AT3G14870.1 | 40.979 | 388 | 216 | 4 | 51 | 430 | 84 | 466 | 2.33e-92 | 287 |
| Msa0633390 | AT3G14870.3 | 40.253 | 395 | 209 | 5 | 51 | 430 | 81 | 463 | 2.36e-92 | 287 |
| Msa0633390 | AT1G53380.2 | 39.655 | 406 | 215 | 5 | 43 | 430 | 58 | 451 | 4.96e-92 | 286 |
| Msa0633390 | AT1G53380.4 | 39.655 | 406 | 215 | 5 | 43 | 430 | 58 | 451 | 4.96e-92 | 286 |
| Msa0633390 | AT1G53380.1 | 39.655 | 406 | 215 | 5 | 43 | 430 | 58 | 451 | 4.96e-92 | 286 |
| Msa0633390 | AT1G53380.3 | 39.655 | 406 | 215 | 5 | 43 | 430 | 58 | 451 | 4.96e-92 | 286 |
| Msa0633390 | AT1G53380.5 | 39.655 | 406 | 215 | 5 | 43 | 430 | 58 | 451 | 4.96e-92 | 286 |
| Msa0633390 | AT1G29300.1 | 40.967 | 393 | 203 | 7 | 47 | 430 | 80 | 452 | 4.25e-87 | 273 |
| Msa0633390 | AT2G30380.1 | 41.005 | 378 | 178 | 7 | 56 | 430 | 76 | 411 | 1.42e-83 | 263 |
| Msa0633390 | AT3G60680.1 | 37.215 | 395 | 212 | 7 | 54 | 431 | 120 | 495 | 2.73e-82 | 262 |
| Msa0633390 | AT5G58960.2 | 33.990 | 406 | 230 | 9 | 52 | 429 | 85 | 480 | 4.00e-67 | 222 |
| Msa0633390 | AT5G58960.3 | 33.990 | 406 | 230 | 9 | 52 | 429 | 85 | 480 | 4.00e-67 | 222 |
| Msa0633390 | AT5G58960.1 | 33.990 | 406 | 230 | 9 | 52 | 429 | 160 | 555 | 3.66e-66 | 221 |
| Msa0633390 | AT4G36100.1 | 84.466 | 103 | 16 | 0 | 41 | 143 | 1 | 103 | 1.38e-56 | 187 |
| Msa0633390 | AT2G32130.1 | 43.902 | 123 | 64 | 2 | 55 | 176 | 36 | 154 | 1.25e-23 | 97.1 |
Find 88 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACCAATTTCTCGCTTTA+AGG | 0.079973 | 4_3:+19029005 | Msa0633390:CDS |
| GACTGTTGTTCTCACGTAAT+TGG | 0.154101 | 4_3:-19028226 | None:intergenic |
| TTTCCACAGCTTCTGGATTC+TGG | 0.187824 | 4_3:-19028286 | None:intergenic |
| TGATGGTTATGCCTGGATTT+TGG | 0.227505 | 4_3:+19029377 | Msa0633390:CDS |
| GTCAAGGTATTTCAGGTTAA+AGG | 0.227565 | 4_3:+19029268 | Msa0633390:CDS |
| GCCAAATGTCAAGGTATTTC+AGG | 0.238187 | 4_3:+19029261 | Msa0633390:CDS |
| CTCACGTAATTGGGCCTCTT+TGG | 0.240249 | 4_3:-19028216 | None:intergenic |
| GGATCTCTGAATCTTTATTC+TGG | 0.244273 | 4_3:-19028592 | None:intergenic |
| TAAAACTAGCCAAGTCAATT+TGG | 0.245512 | 4_3:+19029209 | Msa0633390:CDS |
| ACTAGGGTTTCCACAGCTTC+TGG | 0.255097 | 4_3:-19028293 | None:intergenic |
| GAAAAGAATCTGAAGCTTAG+AGG | 0.283186 | 4_3:+19028665 | Msa0633390:CDS |
| CGAAGCCACCAAACATTCTT+TGG | 0.287110 | 4_3:-19028925 | None:intergenic |
| GGAGAAACACACACTGGCTT+TGG | 0.323341 | 4_3:-19028479 | None:intergenic |
| TCTCCCTTAAAGCGAGAAAT+TGG | 0.330443 | 4_3:-19029009 | None:intergenic |
| ACCTGAAATACCTTGACATT+TGG | 0.347577 | 4_3:-19029262 | None:intergenic |
| TCACCAATTTCTCGCTTTAA+GGG | 0.348161 | 4_3:+19029006 | Msa0633390:CDS |
| AGATCCGGAGTTAGATCAAC+AGG | 0.369847 | 4_3:-19028728 | None:intergenic |
| TACATATGCCAAAGAATGTT+TGG | 0.376902 | 4_3:+19028917 | Msa0633390:CDS |
| AAAGAATCAGAAGATGGAAA+TGG | 0.389518 | 4_3:+19028698 | Msa0633390:CDS |
| ACTGTTGTTCTCACGTAATT+GGG | 0.390567 | 4_3:-19028225 | None:intergenic |
| CGTGATCAAGAATCTGATAA+TGG | 0.398978 | 4_3:+19029324 | Msa0633390:CDS |
| CAGAGTAAAGTTTATCTCTC+TGG | 0.401952 | 4_3:+19029418 | Msa0633390:CDS |
| AAAGCCGAAAGTTGGATTGA+TGG | 0.415632 | 4_3:+19029360 | Msa0633390:CDS |
| TAGCTTCTTCCATTGGTTGA+GGG | 0.420489 | 4_3:-19028259 | None:intergenic |
| ATAACCATCAATCCAACTTT+CGG | 0.420810 | 4_3:-19029364 | None:intergenic |
| GAGAAACACACACTGGCTTT+GGG | 0.424352 | 4_3:-19028478 | None:intergenic |
| GTAGCTTCTTCCATTGGTTG+AGG | 0.433895 | 4_3:-19028260 | None:intergenic |
| CGAGTTCTCCGATGTTTACA+TGG | 0.438330 | 4_3:+19029297 | Msa0633390:CDS |
| CTGAACTTAAGCATTTCTAC+AGG | 0.438407 | 4_3:+19028447 | Msa0633390:CDS |
| AGATTCAGAGATCCATCAAC+TGG | 0.451384 | 4_3:+19028601 | Msa0633390:CDS |
| GAGTATGAGCAGCTTGCAGC+TGG | 0.453517 | 4_3:-19028361 | None:intergenic |
| TTTAAGGGAGATCGACCCTT+TGG | 0.453751 | 4_3:+19029021 | Msa0633390:CDS |
| TGGTTCGTAGCTTCTTCCAT+TGG | 0.454285 | 4_3:-19028266 | None:intergenic |
| TTGGGCCTCTTTGGCTGCAG+TGG | 0.458655 | 4_3:-19028207 | None:intergenic |
| CGAAATTATGTGATGGGTGG+AGG | 0.459957 | 4_3:+19029154 | Msa0633390:CDS |
| TCTGAAGCTTAGAGGTTTGT+CGG | 0.474219 | 4_3:+19028673 | Msa0633390:CDS |
| ACAGAAGATGTAAAGAGATC+CGG | 0.489328 | 4_3:-19028743 | None:intergenic |
| GTGTCCATCCGTCCCTCCAT+TGG | 0.489840 | 4_3:+19028169 | Msa0633390:CDS |
| AAGAATCAGAAGATGGAAAT+GGG | 0.496111 | 4_3:+19028699 | Msa0633390:CDS |
| CTTCTTCCATTGGTTGAGGG+TGG | 0.498803 | 4_3:-19028256 | None:intergenic |
| AATGATGAAAAGCCGAAAGT+TGG | 0.500083 | 4_3:+19029352 | Msa0633390:CDS |
| GTTGGATTGATGGTTATGCC+TGG | 0.505523 | 4_3:+19029370 | Msa0633390:CDS |
| ATCAACATGATGAAAGCAGC+TGG | 0.508364 | 4_3:+19028809 | Msa0633390:CDS |
| GTGTAAAAGCCAAATTGACT+TGG | 0.514838 | 4_3:-19029218 | None:intergenic |
| AACATTTGGTTCGATTGAGT+TGG | 0.516699 | 4_3:-19028852 | None:intergenic |
| TGGGCCTCTTTGGCTGCAGT+GGG | 0.524633 | 4_3:-19028206 | None:intergenic |
| AGTTTATCTCTCTGGTATGA+AGG | 0.530434 | 4_3:+19029426 | Msa0633390:CDS |
| CATGATGAAAGCAGCTGGGT+GGG | 0.531337 | 4_3:+19028814 | Msa0633390:CDS |
| GCTTTCATCATGTTGATCAA+AGG | 0.541157 | 4_3:-19028803 | None:intergenic |
| TCAACTGGAAAAGCAGATAG+AGG | 0.543038 | 4_3:+19028616 | Msa0633390:CDS |
| TAGAGGAGGCTAGTCAAAAG+AGG | 0.549461 | 4_3:+19028633 | Msa0633390:CDS |
| GAAAGTCCACCCTCAACCAA+TGG | 0.552084 | 4_3:+19028250 | Msa0633390:CDS |
| TTTCCCTGTTGATCTAACTC+CGG | 0.555285 | 4_3:+19028724 | Msa0633390:CDS |
| CCTGAAAACGTATGAGGTCA+TGG | 0.558925 | 4_3:+19028547 | Msa0633390:CDS |
| GATCAGCGAAATTATGTGAT+GGG | 0.562322 | 4_3:+19029148 | Msa0633390:CDS |
| AACGCCAATGGAGGGACGGA+TGG | 0.564815 | 4_3:-19028173 | None:intergenic |
| TCGGCTAAAGAATCAGAAGA+TGG | 0.566268 | 4_3:+19028692 | Msa0633390:CDS |
| ATATGCCAAAGAATGTTTGG+TGG | 0.568408 | 4_3:+19028920 | Msa0633390:CDS |
| AGTGGTAGTTCATCCAAAGA+TGG | 0.575405 | 4_3:+19029102 | Msa0633390:CDS |
| AGATCAGCGAAATTATGTGA+TGG | 0.575546 | 4_3:+19029147 | Msa0633390:CDS |
| GCTACCCACTGCAGCCAAAG+AGG | 0.582351 | 4_3:+19028202 | Msa0633390:CDS |
| GCAGCTAAACGCGAGTCTTG+AGG | 0.583544 | 4_3:-19028500 | None:intergenic |
| AAGGTATTTCAGGTTAAAGG+AGG | 0.584321 | 4_3:+19029271 | Msa0633390:CDS |
| AGCTAACGCCAATGGAGGGA+CGG | 0.586984 | 4_3:-19028177 | None:intergenic |
| TTCTGACCTAGCATGTCCAA+AGG | 0.588164 | 4_3:-19029037 | None:intergenic |
| CTTCCACCAATCCAAAATCC+AGG | 0.590038 | 4_3:-19029388 | None:intergenic |
| GGTAGCATAGCTAACGCCAA+TGG | 0.602048 | 4_3:-19028185 | None:intergenic |
| TGAACTTAAGCATTTCTACA+GGG | 0.606736 | 4_3:+19028448 | Msa0633390:CDS |
| TCTGACCTAGCATGTCCAAA+GGG | 0.607496 | 4_3:-19029036 | None:intergenic |
| AGAGGAGGCTAGTCAAAAGA+GGG | 0.611909 | 4_3:+19028634 | Msa0633390:CDS |
| GAGCCTCCTGAAAACGTATG+AGG | 0.612638 | 4_3:+19028541 | Msa0633390:CDS |
| GAACCAGAATCCAGAAGCTG+TGG | 0.615412 | 4_3:+19028283 | Msa0633390:CDS |
| AGCATAGCTAACGCCAATGG+AGG | 0.619340 | 4_3:-19028182 | None:intergenic |
| CAGCGAAATTATGTGATGGG+TGG | 0.621033 | 4_3:+19029151 | Msa0633390:CDS |
| CACGCTTTCCATGTAAACAT+CGG | 0.635615 | 4_3:-19029305 | None:intergenic |
| TAACTTGTTTGTCAGCAGTG+TGG | 0.637561 | 4_3:-19028403 | None:intergenic |
| ACATGATGAAAGCAGCTGGG+TGG | 0.642099 | 4_3:+19028813 | Msa0633390:CDS |
| AGGTATTTCAGGTTAAAGGA+GGG | 0.645858 | 4_3:+19029272 | Msa0633390:CDS |
| GGTAGTTCATCCAAAGATGG+AGG | 0.663656 | 4_3:+19029105 | Msa0633390:CDS |
| TCTTTGGATGAACTACCACT+AGG | 0.667755 | 4_3:-19029099 | None:intergenic |
| GCATAGCTAACGCCAATGGA+GGG | 0.672753 | 4_3:-19028181 | None:intergenic |
| ATCGACCCTTTGGACATGCT+AGG | 0.675961 | 4_3:+19029031 | Msa0633390:CDS |
| CTGCAGGAGCAAATACCTAG+TGG | 0.683301 | 4_3:+19029084 | Msa0633390:CDS |
| TCAACATGATGAAAGCAGCT+GGG | 0.695774 | 4_3:+19028810 | Msa0633390:CDS |
| ACTGGAAAAGCAGATAGAGG+AGG | 0.696578 | 4_3:+19028619 | Msa0633390:CDS |
| TCTTGAGGAGAAACACACAC+TGG | 0.711119 | 4_3:-19028485 | None:intergenic |
| GATATAAGCTGATTTCAGAG+AGG | 0.711231 | 4_3:-19028339 | None:intergenic |
| GATCCGGAGTTAGATCAACA+GGG | 0.758490 | 4_3:-19028727 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAGAAAAAAAGAAA+AGG | - | chr4_3:19024669-19024688 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTATGGA+TGG | + | chr4_3:19025598-19025617 | Msa0633390:intron | 10.0% |
| !! | AATTATAAAAGAAAATGATA+AGG | + | chr4_3:19026880-19026899 | Msa0633390:intron | 10.0% |
| !! | ATTATAAAAGAAAATGATAA+GGG | + | chr4_3:19026881-19026900 | Msa0633390:intron | 10.0% |
| !! | AGATATTAATTTATAAAACA+AGG | - | chr4_3:19027833-19027852 | None:intergenic | 10.0% |
| !!! | TTATAAAATCGTTTTTAACT+TGG | + | chr4_3:19024242-19024261 | Msa0633390:intron | 15.0% |
| !! | TTCAATTTCAATTTCAATTT+AGG | + | chr4_3:19025286-19025305 | Msa0633390:intron | 15.0% |
| !! | TCAATTTCAATTTCAATTTA+GGG | + | chr4_3:19025287-19025306 | Msa0633390:intron | 15.0% |
| !!! | AAAAAAAAAAATGAAGCATT+GGG | - | chr4_3:19025533-19025552 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAATGAAGCAT+TGG | - | chr4_3:19025534-19025553 | None:intergenic | 15.0% |
| !!! | CTTCATTTTTTTTTTTTTTG+AGG | + | chr4_3:19025537-19025556 | Msa0633390:intron | 15.0% |
| !!! | GGGTTTTTTTTTTTTTTTTA+TGG | + | chr4_3:19025594-19025613 | Msa0633390:intron | 15.0% |
| !!! | TAGAAATATATTTTTCATGT+AGG | + | chr4_3:19026071-19026090 | Msa0633390:intron | 15.0% |
| !! | GTATAATATTTATGAAATCA+GGG | + | chr4_3:19026149-19026168 | Msa0633390:intron | 15.0% |
| !! | TTATAAAAGAAAATGATAAG+GGG | + | chr4_3:19026882-19026901 | Msa0633390:intron | 15.0% |
| !! | TATGAATGAAAAAACAAAAT+CGG | - | chr4_3:19027064-19027083 | None:intergenic | 15.0% |
| !!! | ATATATTTCTAACTACTAAT+TGG | - | chr4_3:19026062-19026081 | None:intergenic | 15.0% |
| !! | ATTTATAAAACAAGGAAAAT+AGG | - | chr4_3:19027825-19027844 | None:intergenic | 15.0% |
| !! | AACAATAGTACTCAATTTAA+AGG | + | chr4_3:19024306-19024325 | Msa0633390:intron | 20.0% |
| !! | AATTGTGATAAACAATTGTT+TGG | - | chr4_3:19024624-19024643 | None:intergenic | 20.0% |
| !! | ATGATAAAATCTAAATCACT+AGG | + | chr4_3:19024848-19024867 | Msa0633390:intron | 20.0% |
| !! | TTTGGTTATTATTGAAAGAT+CGG | - | chr4_3:19024939-19024958 | None:intergenic | 20.0% |
| !! | AATTTCGATAAATTACACTT+AGG | + | chr4_3:19025054-19025073 | Msa0633390:intron | 20.0% |
| !! | ATAAATTACACTTAGGAATA+GGG | + | chr4_3:19025061-19025080 | Msa0633390:intron | 20.0% |
| !!! | GTACATTTTTTTTAAAGAAC+AGG | - | chr4_3:19025250-19025269 | None:intergenic | 20.0% |
| !!! | TTGATTTTTGCTTGAAAATT+AGG | + | chr4_3:19025402-19025421 | Msa0633390:intron | 20.0% |
| !!! | TGATTTTTGCTTGAAAATTA+GGG | + | chr4_3:19025403-19025422 | Msa0633390:intron | 20.0% |
| !!! | GAGGTTTTAATTTGATTTTT+TGG | + | chr4_3:19025556-19025575 | Msa0633390:intron | 20.0% |
| !! | NNNNNAATTGAGTAGATGTA+AGG | + | chr4_3:19025994-19026013 | Msa0633390:intron | 20.0% |
| !! | TCATAAATATTATACCACAA+GGG | - | chr4_3:19026144-19026163 | None:intergenic | 20.0% |
| !! | TTCATAAATATTATACCACA+AGG | - | chr4_3:19026145-19026164 | None:intergenic | 20.0% |
| !! | GGTATAATATTTATGAAATC+AGG | + | chr4_3:19026148-19026167 | Msa0633390:intron | 20.0% |
| !! | ACTGTAATTATAGAATGTTT+AGG | + | chr4_3:19026304-19026323 | Msa0633390:intron | 20.0% |
| !!! | AACATTCTTTGAAATATCTT+AGG | + | chr4_3:19026366-19026385 | Msa0633390:intron | 20.0% |
| !! | ATTTGTTCTAACATAAGTTT+CGG | + | chr4_3:19026644-19026663 | Msa0633390:intron | 20.0% |
| !!! | AATACTTTTAGAAAGTAAAC+AGG | - | chr4_3:19026695-19026714 | None:intergenic | 20.0% |
| !!! | ATTTTCTAAATTGCTAACAA+GGG | + | chr4_3:19026724-19026743 | Msa0633390:intron | 20.0% |
| !!! | AAAACGACAAAATTGTTTTA+TGG | - | chr4_3:19026827-19026846 | None:intergenic | 20.0% |
| !! | TGAATTAAATACATGAAACA+TGG | + | chr4_3:19026939-19026958 | Msa0633390:intron | 20.0% |
| !! | GAATTAAATACATGAAACAT+GGG | + | chr4_3:19026940-19026959 | Msa0633390:intron | 20.0% |
| !!! | CAATTAGAGTATTTACTTTT+TGG | + | chr4_3:19027446-19027465 | Msa0633390:intron | 20.0% |
| !! | CTTTCAAAAATGTTTAATCA+AGG | - | chr4_3:19028107-19028126 | None:intergenic | 20.0% |
| !!! | TGTGAATATTTTAGATACTA+GGG | - | chr4_3:19028312-19028331 | None:intergenic | 20.0% |
| !!! | TTGTGAATATTTTAGATACT+AGG | - | chr4_3:19028313-19028332 | None:intergenic | 20.0% |
| !! | TTTAGAAAAACTTGGTAAAA+AGG | - | chr4_3:19029193-19029212 | None:intergenic | 20.0% |
| ! | TAATTTCACCATTAATTCCA+TGG | - | chr4_3:19024278-19024297 | None:intergenic | 25.0% |
| !! | TCACATTCAATCAATCATTT+TGG | - | chr4_3:19024906-19024925 | None:intergenic | 25.0% |
| ! | GATAAATTACACTTAGGAAT+AGG | + | chr4_3:19025060-19025079 | Msa0633390:intron | 25.0% |
| ! | TTTGAATGATACCTTATTGT+TGG | - | chr4_3:19025173-19025192 | None:intergenic | 25.0% |
| ! | TTAGAATCCATATGAATTTC+TGG | + | chr4_3:19025334-19025353 | Msa0633390:intron | 25.0% |
| ! | TAGAATCCATATGAATTTCT+GGG | + | chr4_3:19025335-19025354 | Msa0633390:intron | 25.0% |
| !! | CCTTTAACATAACATTTTTG+GGG | - | chr4_3:19025445-19025464 | None:intergenic | 25.0% |
| !! | CCCTTTAACATAACATTTTT+GGG | - | chr4_3:19025446-19025465 | None:intergenic | 25.0% |
| ! | CCCAAAAATGTTATGTTAAA+GGG | + | chr4_3:19025443-19025462 | Msa0633390:intron | 25.0% |
| !! | ACCCTTTAACATAACATTTT+TGG | - | chr4_3:19025447-19025466 | None:intergenic | 25.0% |
| !!! | TTTTGGAAGATATGCTAAAA+TGG | + | chr4_3:19025573-19025592 | Msa0633390:intron | 25.0% |
| ! | TTTGGAAGATATGCTAAAAT+GGG | + | chr4_3:19025574-19025593 | Msa0633390:intron | 25.0% |
| ! | GTTTGAATTCAAAAATAGCA+AGG | - | chr4_3:19025690-19025709 | None:intergenic | 25.0% |
| !!! | CAATGTCACTATTTTAACTA+TGG | - | chr4_3:19025785-19025804 | None:intergenic | 25.0% |
| ! | CATAGTTAAAATAGTGACAT+TGG | + | chr4_3:19025783-19025802 | Msa0633390:intron | 25.0% |
| ! | TTATCTACATCTAGAAATCT+AGG | - | chr4_3:19025848-19025867 | None:intergenic | 25.0% |
| !! | CATTTAGAATCATTAGTTTC+TGG | + | chr4_3:19026243-19026262 | Msa0633390:intron | 25.0% |
| !!! | AAATGTTTTAATAACCCACT+TGG | + | chr4_3:19026455-19026474 | Msa0633390:intron | 25.0% |
| !!! | AATGTTTTAATAACCCACTT+GGG | + | chr4_3:19026456-19026475 | Msa0633390:intron | 25.0% |
| ! | GATATACATGATATGCAATA+AGG | + | chr4_3:19026603-19026622 | Msa0633390:intron | 25.0% |
| ! | TTTGTTCTAACATAAGTTTC+GGG | + | chr4_3:19026645-19026664 | Msa0633390:intron | 25.0% |
| !! | CATTTTCTAAATTGCTAACA+AGG | + | chr4_3:19026723-19026742 | Msa0633390:intron | 25.0% |
| !! | TTTTCTAAATTGCTAACAAG+GGG | + | chr4_3:19026725-19026744 | Msa0633390:intron | 25.0% |
| ! | CAATTATGATAGAGAGAATA+TGG | + | chr4_3:19026769-19026788 | Msa0633390:intron | 25.0% |
| !! | AAATTCTGAAAATGCTGTAT+CGG | + | chr4_3:19026849-19026868 | Msa0633390:intron | 25.0% |
| ! | ATTGAAGATTAAACCACATA+TGG | + | chr4_3:19027127-19027146 | Msa0633390:intron | 25.0% |
| ! | AAATATATTCTTCATGTTGC+AGG | + | chr4_3:19027258-19027277 | Msa0633390:intron | 25.0% |
| ! | AAATCATAACACAAACACAA+GGG | - | chr4_3:19027331-19027350 | None:intergenic | 25.0% |
| ! | AAAATCATAACACAAACACA+AGG | - | chr4_3:19027332-19027351 | None:intergenic | 25.0% |
| ! | AACATACAGGAAAGAAATAT+AGG | - | chr4_3:19027370-19027389 | None:intergenic | 25.0% |
| ! | TTGTAACTATAGAATGTTCT+AGG | + | chr4_3:19027495-19027514 | Msa0633390:intron | 25.0% |
| ! | TGAAGAAAACTATAACTTTC+TGG | + | chr4_3:19027573-19027592 | Msa0633390:intron | 25.0% |
| ! | GAGTTCAAACTTATTAATCA+AGG | - | chr4_3:19027619-19027638 | None:intergenic | 25.0% |
| !!! | TTGAACTCATATTTCTAGAT+TGG | + | chr4_3:19027631-19027650 | Msa0633390:intron | 25.0% |
| ! | AATTGCAATATAAGTAATCG+TGG | - | chr4_3:19027681-19027700 | None:intergenic | 25.0% |
| ! | GAAATTTGTATGATACACTA+TGG | + | chr4_3:19027765-19027784 | Msa0633390:intron | 25.0% |
| ! | CTAGAAATTAAAGTGTGTAA+CGG | + | chr4_3:19027971-19027990 | Msa0633390:intron | 25.0% |
| ! | TCAAAAATGTTTAATCAAGG+TGG | - | chr4_3:19028104-19028123 | None:intergenic | 25.0% |
| !!! | AATTTGGCTTTTACACAAAT+TGG | + | chr4_3:19029225-19029244 | Msa0633390:CDS | 25.0% |
| !! | TTGTTCACACAATTTTAACC+CGG | + | chr4_3:19024348-19024367 | Msa0633390:intron | 30.0% |
| ! | TTTTGTGAAAATGGTTGCTT+GGG | - | chr4_3:19024425-19024444 | None:intergenic | 30.0% |
| ! | ATTTTGTGAAAATGGTTGCT+TGG | - | chr4_3:19024426-19024445 | None:intergenic | 30.0% |
| !!! | CTGTTGTCATTTTGTGAAAA+TGG | - | chr4_3:19024434-19024453 | None:intergenic | 30.0% |
| AACTACCTGAATTCTAAGTT+AGG | - | chr4_3:19024497-19024516 | None:intergenic | 30.0% | |
| !!! | GTTTTTTGTGATTTCATCGT+TGG | - | chr4_3:19025029-19025048 | None:intergenic | 30.0% |
| CCCCAAAAATGTTATGTTAA+AGG | + | chr4_3:19025442-19025461 | Msa0633390:intron | 30.0% | |
| !! | ATGTTAAAGGGTGTTATACA+TGG | + | chr4_3:19025455-19025474 | Msa0633390:intron | 30.0% |
| GCATTTACAAATGAAACTGT+GGG | - | chr4_3:19026430-19026449 | None:intergenic | 30.0% | |
| TGCATTTACAAATGAAACTG+TGG | - | chr4_3:19026431-19026450 | None:intergenic | 30.0% | |
| GTAGTACTATAACTGAATAG+TGG | + | chr4_3:19027088-19027107 | Msa0633390:intron | 30.0% | |
| !!! | ATAGTGGAATTTTGAGACAT+TGG | + | chr4_3:19027104-19027123 | Msa0633390:intron | 30.0% |
| !! | GACTCTGAAATATAACATAC+AGG | - | chr4_3:19027383-19027402 | None:intergenic | 30.0% |
| ! | ATTATTTCTCTCTGTGTTGA+TGG | + | chr4_3:19027743-19027762 | Msa0633390:intron | 30.0% |
| !! | AATAGGCGTACTTTAATTTG+AGG | - | chr4_3:19027808-19027827 | None:intergenic | 30.0% |
| !! | AAACATTTTTGAAAGCTTGC+AGG | + | chr4_3:19028112-19028131 | Msa0633390:intron | 30.0% |
| TGAACTTAAGCATTTCTACA+GGG | + | chr4_3:19028448-19028467 | Msa0633390:CDS | 30.0% | |
| AAAGAATCAGAAGATGGAAA+TGG | + | chr4_3:19028698-19028717 | Msa0633390:CDS | 30.0% | |
| AAGAATCAGAAGATGGAAAT+GGG | + | chr4_3:19028699-19028718 | Msa0633390:CDS | 30.0% | |
| ! | CTTTTCGCATAAACAACATT+TGG | - | chr4_3:19028869-19028888 | None:intergenic | 30.0% |
| TACATATGCCAAAGAATGTT+TGG | + | chr4_3:19028917-19028936 | Msa0633390:CDS | 30.0% | |
| !! | AGAATCCAGATTCCATTTTT+GGG | + | chr4_3:19029056-19029075 | Msa0633390:CDS | 30.0% |
| AATTTCCCAAAAATGGAATC+TGG | - | chr4_3:19029064-19029083 | None:intergenic | 30.0% | |
| !!! | TGGCTAGTTTTAGAAAAACT+TGG | - | chr4_3:19029201-19029220 | None:intergenic | 30.0% |
| TAAAACTAGCCAAGTCAATT+TGG | + | chr4_3:19029209-19029228 | Msa0633390:CDS | 30.0% | |
| ATAACCATCAATCCAACTTT+CGG | - | chr4_3:19029367-19029386 | None:intergenic | 30.0% | |
| CCATTAATTCCATGGATTCA+CGG | - | chr4_3:19024270-19024289 | None:intergenic | 35.0% | |
| !! | ATTTTAACCCGGCTCAAATT+TGG | + | chr4_3:19024359-19024378 | Msa0633390:intron | 35.0% |
| TAGCACCTAACTTAGAATTC+AGG | + | chr4_3:19024489-19024508 | Msa0633390:intron | 35.0% | |
| AACTTAGACCAGTTGAATTC+TGG | - | chr4_3:19024566-19024585 | None:intergenic | 35.0% | |
| TAGTTTGAACCAGTGAATGT+TGG | - | chr4_3:19024594-19024613 | None:intergenic | 35.0% | |
| ! | AAGATGGAAGTTGTCTTGTT+CGG | - | chr4_3:19025143-19025162 | None:intergenic | 35.0% |
| TATTGTTGGAAGAGTGAAGA+TGG | - | chr4_3:19025159-19025178 | None:intergenic | 35.0% | |
| TCTTCACTCTTCCAACAATA+AGG | + | chr4_3:19025159-19025178 | Msa0633390:intron | 35.0% | |
| AAACAACGTTAACGAATCGA+AGG | - | chr4_3:19025212-19025231 | None:intergenic | 35.0% | |
| AACAGACCCAGAAATTCATA+TGG | - | chr4_3:19025344-19025363 | None:intergenic | 35.0% | |
| CTGAAAAATGCAGTCTTTCT+AGG | + | chr4_3:19025494-19025513 | Msa0633390:intron | 35.0% | |
| !! | AAAATGAAGCATTGGGAATG+TGG | - | chr4_3:19025526-19025545 | None:intergenic | 35.0% |
| AGTTTCATGTTGTGTAGCTT+AGG | + | chr4_3:19025636-19025655 | Msa0633390:intron | 35.0% | |
| ! | AGATGTAGATAACCGTGTTT+TGG | + | chr4_3:19025856-19025875 | Msa0633390:intron | 35.0% |
| ! | GATGTAGATAACCGTGTTTT+GGG | + | chr4_3:19025857-19025876 | Msa0633390:intron | 35.0% |
| AATTGAGTAGATGTAAGGAG+AGG | + | chr4_3:19025999-19026018 | Msa0633390:intron | 35.0% | |
| AGGACAAGTATGACTCAATT+AGG | + | chr4_3:19026019-19026038 | Msa0633390:intron | 35.0% | |
| ! | TTTCTGGACATGCTATTTGT+GGG | + | chr4_3:19026259-19026278 | Msa0633390:intron | 35.0% |
| TGACTTAGGATTGCAAACTA+GGG | + | chr4_3:19026668-19026687 | Msa0633390:intron | 35.0% | |
| ATGAAACATGGGAAGTAAAC+CGG | + | chr4_3:19026951-19026970 | Msa0633390:intron | 35.0% | |
| GACTTCACAAGCAAAATCTA+GGG | - | chr4_3:19026977-19026996 | None:intergenic | 35.0% | |
| AGACTTCACAAGCAAAATCT+AGG | - | chr4_3:19026978-19026997 | None:intergenic | 35.0% | |
| AAAACACAGCTATCCATATG+TGG | - | chr4_3:19027143-19027162 | None:intergenic | 35.0% | |
| ! | ACATATGGATAGCTGTGTTT+TGG | + | chr4_3:19027142-19027161 | Msa0633390:intron | 35.0% |
| ! | CATATGGATAGCTGTGTTTT+GGG | + | chr4_3:19027143-19027162 | Msa0633390:intron | 35.0% |
| TGAACTTGAAGTGAGATGTA+AGG | + | chr4_3:19027177-19027196 | Msa0633390:intron | 35.0% | |
| TCAGATAGGCTATTAGTTGT+TGG | + | chr4_3:19027217-19027236 | Msa0633390:intron | 35.0% | |
| ! | AGGTAATTGATTCTGTGAAC+TGG | + | chr4_3:19027278-19027297 | Msa0633390:intron | 35.0% |
| ! | CTTTTTGGACATGTTGTATG+TGG | + | chr4_3:19027461-19027480 | Msa0633390:intron | 35.0% |
| TGGTATCAGACACAAAAGAA+AGG | + | chr4_3:19027593-19027612 | Msa0633390:intron | 35.0% | |
| TTAAAGCAGCTGAACATGTT+TGG | + | chr4_3:19027853-19027872 | Msa0633390:intron | 35.0% | |
| !!! | GGGTTTTAGGTAGTGTTTTT+GGG | - | chr4_3:19027902-19027921 | None:intergenic | 35.0% |
| !!! | TGGGTTTTAGGTAGTGTTTT+TGG | - | chr4_3:19027903-19027922 | None:intergenic | 35.0% |
| TTCAGATGATGTTTCATGCT+AGG | - | chr4_3:19027926-19027945 | None:intergenic | 35.0% | |
| ACTGTTGTTCTCACGTAATT+GGG | - | chr4_3:19028228-19028247 | None:intergenic | 35.0% | |
| ! | GATATAAGCTGATTTCAGAG+AGG | - | chr4_3:19028342-19028361 | None:intergenic | 35.0% |
| ! | TGGATTTTATCGGGATCATA+GGG | - | chr4_3:19028386-19028405 | None:intergenic | 35.0% |
| CTGAACTTAAGCATTTCTAC+AGG | + | chr4_3:19028447-19028466 | Msa0633390:CDS | 35.0% | |
| GGATCTCTGAATCTTTATTC+TGG | - | chr4_3:19028595-19028614 | None:intergenic | 35.0% | |
| ! | GAAAAGAATCTGAAGCTTAG+AGG | + | chr4_3:19028665-19028684 | Msa0633390:CDS | 35.0% |
| ACAGAAGATGTAAAGAGATC+CGG | - | chr4_3:19028746-19028765 | None:intergenic | 35.0% | |
| GCTTTCATCATGTTGATCAA+AGG | - | chr4_3:19028806-19028825 | None:intergenic | 35.0% | |
| ! | AACATTTGGTTCGATTGAGT+TGG | - | chr4_3:19028855-19028874 | None:intergenic | 35.0% |
| ATATGCCAAAGAATGTTTGG+TGG | + | chr4_3:19028920-19028939 | Msa0633390:CDS | 35.0% | |
| TTCACCAATTTCTCGCTTTA+AGG | + | chr4_3:19029005-19029024 | Msa0633390:CDS | 35.0% | |
| TCACCAATTTCTCGCTTTAA+GGG | + | chr4_3:19029006-19029025 | Msa0633390:CDS | 35.0% | |
| ! | CAGAATCCAGATTCCATTTT+TGG | + | chr4_3:19029055-19029074 | Msa0633390:CDS | 35.0% |
| AGATCAGCGAAATTATGTGA+TGG | + | chr4_3:19029147-19029166 | Msa0633390:CDS | 35.0% | |
| GATCAGCGAAATTATGTGAT+GGG | + | chr4_3:19029148-19029167 | Msa0633390:CDS | 35.0% | |
| ACTTGGTAAAAAGGAGTTCT+TGG | - | chr4_3:19029184-19029203 | None:intergenic | 35.0% | |
| GTGTAAAAGCCAAATTGACT+TGG | - | chr4_3:19029221-19029240 | None:intergenic | 35.0% | |
| ! | TTCTTTTGAGCCAAATGTCA+AGG | + | chr4_3:19029252-19029271 | Msa0633390:CDS | 35.0% |
| ACCTGAAATACCTTGACATT+TGG | - | chr4_3:19029265-19029284 | None:intergenic | 35.0% | |
| !! | GTCAAGGTATTTCAGGTTAA+AGG | + | chr4_3:19029268-19029287 | Msa0633390:CDS | 35.0% |
| !! | AAGGTATTTCAGGTTAAAGG+AGG | + | chr4_3:19029271-19029290 | Msa0633390:CDS | 35.0% |
| !! | AGGTATTTCAGGTTAAAGGA+GGG | + | chr4_3:19029272-19029291 | Msa0633390:CDS | 35.0% |
| CGTGATCAAGAATCTGATAA+TGG | + | chr4_3:19029324-19029343 | Msa0633390:CDS | 35.0% | |
| AATGATGAAAAGCCGAAAGT+TGG | + | chr4_3:19029352-19029371 | Msa0633390:CDS | 35.0% | |
| CAGAGTAAAGTTTATCTCTC+TGG | + | chr4_3:19029418-19029437 | Msa0633390:CDS | 35.0% | |
| AGTTTATCTCTCTGGTATGA+AGG | + | chr4_3:19029426-19029445 | Msa0633390:CDS | 35.0% | |
| CCGTGAATCCATGGAATTAA+TGG | + | chr4_3:19024267-19024286 | Msa0633390:intron | 40.0% | |
| CTCAAATTTGGCAAAAGGCT+TGG | + | chr4_3:19024371-19024390 | Msa0633390:intron | 40.0% | |
| GCTTGGATATTTATCAGTCC+AGG | + | chr4_3:19024388-19024407 | Msa0633390:intron | 40.0% | |
| ATCAAAGGCCAGAATTCAAC+TGG | + | chr4_3:19024555-19024574 | Msa0633390:intron | 40.0% | |
| AGTTGAACTCCAACATTCAC+TGG | + | chr4_3:19024582-19024601 | Msa0633390:intron | 40.0% | |
| ! | GATTGGTTGTAGTGTTCGTT+TGG | - | chr4_3:19024957-19024976 | None:intergenic | 40.0% |
| ! | GCGTTGTTTGATTTCGAGAT+TGG | - | chr4_3:19024974-19024993 | None:intergenic | 40.0% |
| AGTAAAGTGAAAGCTTCGTG+TGG | - | chr4_3:19025117-19025136 | None:intergenic | 40.0% | |
| GGATTCAAGATTAGACCATG+AGG | + | chr4_3:19025804-19025823 | Msa0633390:intron | 40.0% | |
| TTAGACCATGAGGACTTTCT+TGG | + | chr4_3:19025814-19025833 | Msa0633390:intron | 40.0% | |
| TATCACCAAGAAAGTCCTCA+TGG | - | chr4_3:19025822-19025841 | None:intergenic | 40.0% | |
| CTATGAACTGACCCAAAACA+CGG | - | chr4_3:19025871-19025890 | None:intergenic | 40.0% | |
| ! | AGGCAATTGATTCTGTGAAC+TGG | + | chr4_3:19026091-19026110 | Msa0633390:intron | 40.0% |
| ! | GCTTGGTAATTTAGTCCAGA+AGG | - | chr4_3:19026117-19026136 | None:intergenic | 40.0% |
| ATTCCCAGAGTAAACTGTTC+TGG | + | chr4_3:19026200-19026219 | Msa0633390:intron | 40.0% | |
| ACACCAGAACAGTTTACTCT+GGG | - | chr4_3:19026206-19026225 | None:intergenic | 40.0% | |
| AACACCAGAACAGTTTACTC+TGG | - | chr4_3:19026207-19026226 | None:intergenic | 40.0% | |
| ! | GTTTCTGGACATGCTATTTG+TGG | + | chr4_3:19026258-19026277 | Msa0633390:intron | 40.0% |
| ! | TTCTGGACATGCTATTTGTG+GGG | + | chr4_3:19026260-19026279 | Msa0633390:intron | 40.0% |
| ! | ACATAAGTTTCGGGTGACTT+AGG | + | chr4_3:19026654-19026673 | Msa0633390:intron | 40.0% |
| GTGACTTAGGATTGCAAACT+AGG | + | chr4_3:19026667-19026686 | Msa0633390:intron | 40.0% | |
| GACTTAGGATTGCAAACTAG+GGG | + | chr4_3:19026669-19026688 | Msa0633390:intron | 40.0% | |
| TGAAGTGAGATGTAAGGAAG+AGG | + | chr4_3:19027183-19027202 | Msa0633390:intron | 40.0% | |
| TGCATGGTAATTTGATCCAG+AGG | - | chr4_3:19027305-19027324 | None:intergenic | 40.0% | |
| !!! | AGTGTTTTTGGGACTTTCTC+AGG | - | chr4_3:19027891-19027910 | None:intergenic | 40.0% |
| !! | TTTCATGCTAGGTGGGTTTT+AGG | - | chr4_3:19027915-19027934 | None:intergenic | 40.0% |
| GATGATGTTTCATGCTAGGT+GGG | - | chr4_3:19027922-19027941 | None:intergenic | 40.0% | |
| AGATGATGTTTCATGCTAGG+TGG | - | chr4_3:19027923-19027942 | None:intergenic | 40.0% | |
| GACTGTTGTTCTCACGTAAT+TGG | - | chr4_3:19028229-19028248 | None:intergenic | 40.0% | |
| ! | TAGCTTCTTCCATTGGTTGA+GGG | - | chr4_3:19028262-19028281 | None:intergenic | 40.0% |
| ! | GTGGATTTTATCGGGATCAT+AGG | - | chr4_3:19028387-19028406 | None:intergenic | 40.0% |
| ! | TCAGCAGTGTGGATTTTATC+GGG | - | chr4_3:19028395-19028414 | None:intergenic | 40.0% |
| ! | GTCAGCAGTGTGGATTTTAT+CGG | - | chr4_3:19028396-19028415 | None:intergenic | 40.0% |
| !! | TAACTTGTTTGTCAGCAGTG+TGG | - | chr4_3:19028406-19028425 | None:intergenic | 40.0% |
| AGATTCAGAGATCCATCAAC+TGG | + | chr4_3:19028601-19028620 | Msa0633390:CDS | 40.0% | |
| !! | CTATCTGCTTTTCCAGTTGA+TGG | - | chr4_3:19028616-19028635 | None:intergenic | 40.0% |
| TCAACTGGAAAAGCAGATAG+AGG | + | chr4_3:19028616-19028635 | Msa0633390:CDS | 40.0% | |
| ! | TCTGAAGCTTAGAGGTTTGT+CGG | + | chr4_3:19028673-19028692 | Msa0633390:CDS | 40.0% |
| TCGGCTAAAGAATCAGAAGA+TGG | + | chr4_3:19028692-19028711 | Msa0633390:CDS | 40.0% | |
| TTTCCCTGTTGATCTAACTC+CGG | + | chr4_3:19028724-19028743 | Msa0633390:CDS | 40.0% | |
| ATCAACATGATGAAAGCAGC+TGG | + | chr4_3:19028809-19028828 | Msa0633390:CDS | 40.0% | |
| TCAACATGATGAAAGCAGCT+GGG | + | chr4_3:19028810-19028829 | Msa0633390:CDS | 40.0% | |
| TCTCCCTTAAAGCGAGAAAT+TGG | - | chr4_3:19029012-19029031 | None:intergenic | 40.0% | |
| CCTGCAGAATTTCCCAAAAA+TGG | - | chr4_3:19029071-19029090 | None:intergenic | 40.0% | |
| !! | CCATTTTTGGGAAATTCTGC+AGG | + | chr4_3:19029068-19029087 | Msa0633390:CDS | 40.0% |
| TCTTTGGATGAACTACCACT+AGG | - | chr4_3:19029102-19029121 | None:intergenic | 40.0% | |
| AGTGGTAGTTCATCCAAAGA+TGG | + | chr4_3:19029102-19029121 | Msa0633390:CDS | 40.0% | |
| AAAAACGATGCCTCCATCTT+TGG | - | chr4_3:19029118-19029137 | None:intergenic | 40.0% | |
| !!! | AAGATGGAGGCATCGTTTTT+TGG | + | chr4_3:19029118-19029137 | Msa0633390:CDS | 40.0% |
| ! | GCCAAATGTCAAGGTATTTC+AGG | + | chr4_3:19029261-19029280 | Msa0633390:CDS | 40.0% |
| CACGCTTTCCATGTAAACAT+CGG | - | chr4_3:19029308-19029327 | None:intergenic | 40.0% | |
| AAAGCCGAAAGTTGGATTGA+TGG | + | chr4_3:19029360-19029379 | Msa0633390:CDS | 40.0% | |
| ! | TGATGGTTATGCCTGGATTT+TGG | + | chr4_3:19029377-19029396 | Msa0633390:CDS | 40.0% |
| ! | GTTATGCCTGGATTTTGGAT+TGG | + | chr4_3:19029382-19029401 | Msa0633390:CDS | 40.0% |
| AACTTGGAACCGTGAATCCA+TGG | + | chr4_3:19024258-19024277 | Msa0633390:intron | 45.0% | |
| ! | CCTTTTGCCAAATTTGAGCC+GGG | - | chr4_3:19024369-19024388 | None:intergenic | 45.0% |
| ! | GCCTTTTGCCAAATTTGAGC+CGG | - | chr4_3:19024370-19024389 | None:intergenic | 45.0% |
| TATCAGTCCAGGTCTATACC+CGG | + | chr4_3:19024399-19024418 | Msa0633390:intron | 45.0% | |
| TGACAACAGTACTACTGTGC+AGG | + | chr4_3:19024445-19024464 | Msa0633390:intron | 45.0% | |
| TGGCTTCAATGTTGCAGATG+TGG | - | chr4_3:19024886-19024905 | None:intergenic | 45.0% | |
| AGTGAAAGCTTCGTGTGGTA+AGG | - | chr4_3:19025112-19025131 | None:intergenic | 45.0% | |
| ATTACCAAGCATGACCCTTG+TGG | + | chr4_3:19026127-19026146 | Msa0633390:intron | 45.0% | |
| TATACCACAAGGGTCATGCT+TGG | - | chr4_3:19026134-19026153 | None:intergenic | 45.0% | |
| !! | TTGACCTGGTTGTGTTGACT+TGG | + | chr4_3:19026479-19026498 | Msa0633390:intron | 45.0% |
| !! | TGACCTGGTTGTGTTGACTT+GGG | + | chr4_3:19026480-19026499 | Msa0633390:intron | 45.0% |
| GAATCGAACTTGAGACCTTG+AGG | - | chr4_3:19026524-19026543 | None:intergenic | 45.0% | |
| ! | ATTCTCCCTGGTGCCAATTT+CGG | + | chr4_3:19026540-19026559 | Msa0633390:intron | 45.0% |
| CTAAACTAGCCCACCGAAAT+TGG | - | chr4_3:19026556-19026575 | None:intergenic | 45.0% | |
| ! | TCACAAGCAAAATCTAGGGC+CGG | - | chr4_3:19026973-19026992 | None:intergenic | 45.0% |
| AGGACAAGTGTGACTCAGAT+AGG | + | chr4_3:19027203-19027222 | Msa0633390:intron | 45.0% | |
| ACAAACACAAGGGTCTTGCA+TGG | - | chr4_3:19027321-19027340 | None:intergenic | 45.0% | |
| GAAGCTTGAGTAGAGAGACA+TGG | + | chr4_3:19027523-19027542 | Msa0633390:intron | 45.0% | |
| ! | GTAGCTTCTTCCATTGGTTG+AGG | - | chr4_3:19028263-19028282 | None:intergenic | 45.0% |
| TGGTTCGTAGCTTCTTCCAT+TGG | - | chr4_3:19028269-19028288 | None:intergenic | 45.0% | |
| TTTCCACAGCTTCTGGATTC+TGG | - | chr4_3:19028289-19028308 | None:intergenic | 45.0% | |
| !! | GAGAAACACACACTGGCTTT+GGG | - | chr4_3:19028481-19028500 | None:intergenic | 45.0% |
| TCTTGAGGAGAAACACACAC+TGG | - | chr4_3:19028488-19028507 | None:intergenic | 45.0% | |
| !! | TGACCTCATACGTTTTCAGG+AGG | - | chr4_3:19028547-19028566 | None:intergenic | 45.0% |
| ! | CCATGACCTCATACGTTTTC+AGG | - | chr4_3:19028550-19028569 | None:intergenic | 45.0% |
| CCTGAAAACGTATGAGGTCA+TGG | + | chr4_3:19028547-19028566 | Msa0633390:CDS | 45.0% | |
| ACTGGAAAAGCAGATAGAGG+AGG | + | chr4_3:19028619-19028638 | Msa0633390:CDS | 45.0% | |
| ! | TAGAGGAGGCTAGTCAAAAG+AGG | + | chr4_3:19028633-19028652 | Msa0633390:CDS | 45.0% |
| ! | AGAGGAGGCTAGTCAAAAGA+GGG | + | chr4_3:19028634-19028653 | Msa0633390:CDS | 45.0% |
| GATCCGGAGTTAGATCAACA+GGG | - | chr4_3:19028730-19028749 | None:intergenic | 45.0% | |
| AGATCCGGAGTTAGATCAAC+AGG | - | chr4_3:19028731-19028750 | None:intergenic | 45.0% | |
| CGAAGCCACCAAACATTCTT+TGG | - | chr4_3:19028928-19028947 | None:intergenic | 45.0% | |
| TTTAAGGGAGATCGACCCTT+TGG | + | chr4_3:19029021-19029040 | Msa0633390:CDS | 45.0% | |
| TCTGACCTAGCATGTCCAAA+GGG | - | chr4_3:19029039-19029058 | None:intergenic | 45.0% | |
| TTCTGACCTAGCATGTCCAA+AGG | - | chr4_3:19029040-19029059 | None:intergenic | 45.0% | |
| GGTAGTTCATCCAAAGATGG+AGG | + | chr4_3:19029105-19029124 | Msa0633390:CDS | 45.0% | |
| ! | CAGCGAAATTATGTGATGGG+TGG | + | chr4_3:19029151-19029170 | Msa0633390:CDS | 45.0% |
| !! | CGAAATTATGTGATGGGTGG+AGG | + | chr4_3:19029154-19029173 | Msa0633390:CDS | 45.0% |
| CGAGTTCTCCGATGTTTACA+TGG | + | chr4_3:19029297-19029316 | Msa0633390:CDS | 45.0% | |
| ! | GTTGGATTGATGGTTATGCC+TGG | + | chr4_3:19029370-19029389 | Msa0633390:CDS | 45.0% |
| !! | ATGCCTGGATTTTGGATTGG+TGG | + | chr4_3:19029385-19029404 | Msa0633390:CDS | 45.0% |
| CTTCCACCAATCCAAAATCC+AGG | - | chr4_3:19029391-19029410 | None:intergenic | 45.0% | |
| !! | ATAATATTAATTAATATACA+CGG | - | chr4_3:19024535-19024554 | None:intergenic | 5.0% |
| !! | ATTAATTAATATTATATCAA+AGG | + | chr4_3:19024540-19024559 | Msa0633390:intron | 5.0% |
| CCCGGCTCAAATTTGGCAAA+AGG | + | chr4_3:19024366-19024385 | Msa0633390:intron | 50.0% | |
| TGAAAATGGTTGCTTGGGCC+GGG | - | chr4_3:19024420-19024439 | None:intergenic | 50.0% | |
| GTGAAAATGGTTGCTTGGGC+CGG | - | chr4_3:19024421-19024440 | None:intergenic | 50.0% | |
| TGTGCAGGCAGTCTTAGAGT+AGG | + | chr4_3:19024460-19024479 | Msa0633390:intron | 50.0% | |
| AGGCAGTCTTAGAGTAGGCT+TGG | + | chr4_3:19024465-19024484 | Msa0633390:intron | 50.0% | |
| AGACGACGAACAACACAACG+TGG | + | chr4_3:19024999-19025018 | Msa0633390:intron | 50.0% | |
| !! | GATTCTGTGAACTGGCCTTC+TGG | + | chr4_3:19026099-19026118 | Msa0633390:intron | 50.0% |
| ! | GACATGCTATTTGTGGGGTG+AGG | + | chr4_3:19026265-19026284 | Msa0633390:intron | 50.0% |
| GCTATTTGTGGGGTGAGGAT+TGG | + | chr4_3:19026270-19026289 | Msa0633390:intron | 50.0% | |
| TTTGTGGGGTGAGGATTGGA+TGG | + | chr4_3:19026274-19026293 | Msa0633390:intron | 50.0% | |
| !! | ATAACCCACTTGGGTTGACC+TGG | + | chr4_3:19026465-19026484 | Msa0633390:intron | 50.0% |
| ACAACCAGGTCAACCCAAGT+GGG | - | chr4_3:19026472-19026491 | None:intergenic | 50.0% | |
| !! | GTTGTGTTGACTTGGGTCCT+TGG | + | chr4_3:19026487-19026506 | Msa0633390:intron | 50.0% |
| TCGAACTTGAGACCTTGAGG+AGG | - | chr4_3:19026521-19026540 | None:intergenic | 50.0% | |
| GTCTCAAGTTCGATTCTCCC+TGG | + | chr4_3:19026528-19026547 | Msa0633390:intron | 50.0% | |
| GATTCTGTGAACTGGACCTC+TGG | + | chr4_3:19027286-19027305 | Msa0633390:intron | 50.0% | |
| GCATAGCTAACGCCAATGGA+GGG | - | chr4_3:19028184-19028203 | None:intergenic | 50.0% | |
| CTCACGTAATTGGGCCTCTT+TGG | - | chr4_3:19028219-19028238 | None:intergenic | 50.0% | |
| GAAAGTCCACCCTCAACCAA+TGG | + | chr4_3:19028250-19028269 | Msa0633390:CDS | 50.0% | |
| ! | CTTCTTCCATTGGTTGAGGG+TGG | - | chr4_3:19028259-19028278 | None:intergenic | 50.0% |
| GAACCAGAATCCAGAAGCTG+TGG | + | chr4_3:19028283-19028302 | Msa0633390:CDS | 50.0% | |
| ACTAGGGTTTCCACAGCTTC+TGG | - | chr4_3:19028296-19028315 | None:intergenic | 50.0% | |
| !! | GGAGAAACACACACTGGCTT+TGG | - | chr4_3:19028482-19028501 | None:intergenic | 50.0% |
| GAGCCTCCTGAAAACGTATG+AGG | + | chr4_3:19028541-19028560 | Msa0633390:CDS | 50.0% | |
| ACATGATGAAAGCAGCTGGG+TGG | + | chr4_3:19028813-19028832 | Msa0633390:CDS | 50.0% | |
| CATGATGAAAGCAGCTGGGT+GGG | + | chr4_3:19028814-19028833 | Msa0633390:CDS | 50.0% | |
| ATCGACCCTTTGGACATGCT+AGG | + | chr4_3:19029031-19029050 | Msa0633390:CDS | 50.0% | |
| CTGCAGGAGCAAATACCTAG+TGG | + | chr4_3:19029084-19029103 | Msa0633390:CDS | 50.0% | |
| CACAACCAGGTCAACCCAAG+TGG | - | chr4_3:19026473-19026492 | None:intergenic | 55.0% | |
| GGACCCAAGTCAACACAACC+AGG | - | chr4_3:19026486-19026505 | None:intergenic | 55.0% | |
| ! | TTGAGGAGGAGCACACTCCA+AGG | - | chr4_3:19026507-19026526 | None:intergenic | 55.0% |
| TTGGAGTGTGCTCCTCCTCA+AGG | + | chr4_3:19026506-19026525 | Msa0633390:intron | 55.0% | |
| ! | TCCCTGGTGCCAATTTCGGT+GGG | + | chr4_3:19026544-19026563 | Msa0633390:intron | 55.0% |
| AGCTAACGCCAATGGAGGGA+CGG | - | chr4_3:19028180-19028199 | None:intergenic | 55.0% | |
| GAGTATGAGCAGCTTGCAGC+TGG | - | chr4_3:19028364-19028383 | None:intergenic | 55.0% | |
| GCAGCTAAACGCGAGTCTTG+AGG | - | chr4_3:19028503-19028522 | None:intergenic | 55.0% | |
| ! | CTCCCTGGTGCCAATTTCGG+TGG | + | chr4_3:19026543-19026562 | Msa0633390:intron | 60.0% |
| GCCCACCGAAATTGGCACCA+GGG | - | chr4_3:19026548-19026567 | None:intergenic | 60.0% | |
| AGCCCACCGAAATTGGCACC+AGG | - | chr4_3:19026549-19026568 | None:intergenic | 60.0% | |
| GTGTCCATCCGTCCCTCCAT+TGG | + | chr4_3:19028169-19028188 | Msa0633390:CDS | 60.0% | |
| AACGCCAATGGAGGGACGGA+TGG | - | chr4_3:19028176-19028195 | None:intergenic | 60.0% | |
| TGGGCCTCTTTGGCTGCAGT+GGG | - | chr4_3:19028209-19028228 | None:intergenic | 60.0% | |
| TTGGGCCTCTTTGGCTGCAG+TGG | - | chr4_3:19028210-19028229 | None:intergenic | 60.0% | |
| GCTTGGGCCGGGTATAGACC+TGG | - | chr4_3:19024409-19024428 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 19024204 | 19029459 | 19024204 | ID=Msa0633390;Name=Msa0633390 |
| chr4_3 | mRNA | 19024204 | 19029459 | 19024204 | ID=Msa0633390-mRNA-1;Parent=Msa0633390;Name=Msa0633390-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|0.66|0|0.33|3|0|436 |
| chr4_3 | exon | 19024204 | 19024211 | 19024204 | ID=Msa0633390-mRNA-1:exon:5184;Parent=Msa0633390-mRNA-1 |
| chr4_3 | exon | 19028134 | 19028140 | 19028134 | ID=Msa0633390-mRNA-1:exon:5185;Parent=Msa0633390-mRNA-1 |
| chr4_3 | exon | 19028164 | 19029459 | 19028164 | ID=Msa0633390-mRNA-1:exon:5186;Parent=Msa0633390-mRNA-1 |
| chr4_3 | CDS | 19024204 | 19024211 | 19024204 | ID=Msa0633390-mRNA-1:cds;Parent=Msa0633390-mRNA-1 |
| chr4_3 | CDS | 19028134 | 19028140 | 19028134 | ID=Msa0633390-mRNA-1:cds;Parent=Msa0633390-mRNA-1 |
| chr4_3 | CDS | 19028164 | 19029459 | 19028164 | ID=Msa0633390-mRNA-1:cds;Parent=Msa0633390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
