Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0179960 | XP_013469863.1 | 95.677 | 347 | 15 | 0 | 1 | 347 | 1 | 347 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0179960 | sp|Q3UHX9|CI114_MOUSE | 46.732 | 306 | 156 | 5 | 43 | 343 | 68 | 371 | 2.44e-85 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0179960 | A0A072VQH5 | 95.677 | 347 | 15 | 0 | 1 | 347 | 1 | 347 | 0.0 | 667 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040630 | Msa0179960 | 0.846511 | 2.074291e-59 | -8.615850e-47 |
| Msa0138510 | Msa0179960 | 0.858345 | 8.782471e-63 | -8.615850e-47 |
| Msa0138530 | Msa0179960 | 0.854155 | 1.485935e-61 | -8.615850e-47 |
| Msa0179960 | Msa0352330 | 0.810245 | 1.268541e-50 | -8.615850e-47 |
| Msa0179960 | Msa0647500 | 0.800698 | 1.275465e-48 | -8.615850e-47 |
| Msa0179960 | Msa1432420 | 0.806485 | 8.038943e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0179960 | MtrunA17_Chr1g0205901 | 95.677 | 347 | 15 | 0 | 1 | 347 | 1 | 347 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0179960 | AT5G19300.1 | 68.153 | 314 | 96 | 3 | 34 | 345 | 84 | 395 | 4.24e-155 | 441 |
Find 118 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAGCATTGCTCGGCTTAT+TGG | 0.172731 | 1_4:+67670134 | None:intergenic |
| TCATCGATGTTGCCATTTAT+TGG | 0.179774 | 1_4:+67675357 | None:intergenic |
| AGTTGATGTTGGCTTATTTA+AGG | 0.186095 | 1_4:-67673214 | Msa0179960:intron |
| TGAGGAAGATGATAACTTTA+AGG | 0.223818 | 1_4:-67670856 | Msa0179960:intron |
| GAGTTGGTATTGGAGGGTTT+TGG | 0.229118 | 1_4:+67675447 | None:intergenic |
| CCATTTATTGGGTTTGGTTC+AGG | 0.241598 | 1_4:+67675369 | None:intergenic |
| GCCAACCGCAATTTGGATTA+TGG | 0.253118 | 1_4:-67672220 | Msa0179960:intron |
| TTCTTCCGGGTTCAAGTATT+TGG | 0.255682 | 1_4:+67672263 | None:intergenic |
| GTGACCTACACAAATATAAT+TGG | 0.278198 | 1_4:+67669984 | None:intergenic |
| CATCGATGTTGCCATTTATT+GGG | 0.278770 | 1_4:+67675358 | None:intergenic |
| CGAATATTCCTGTTAAGATT+AGG | 0.278934 | 1_4:-67669876 | Msa0179960:three_prime_UTR |
| CATGGGCGCCAACCGCAATT+TGG | 0.285952 | 1_4:-67672227 | Msa0179960:CDS |
| TAGGGAAGAAGGAGCATATT+GGG | 0.306398 | 1_4:-67671866 | Msa0179960:CDS |
| CCTGAACCAAACCCAATAAA+TGG | 0.310870 | 1_4:-67675369 | Msa0179960:CDS |
| CCCACTCATGTTTGCGCAAA+TGG | 0.317819 | 1_4:+67674632 | None:intergenic |
| ACCAATAAGCCGAGCAATGC+TGG | 0.317878 | 1_4:-67670135 | Msa0179960:CDS |
| GGCGACAGTAACTCTTCTTC+CGG | 0.318602 | 1_4:+67672249 | None:intergenic |
| AAACTTTAGTTTGTCGTGTA+TGG | 0.338148 | 1_4:-67669954 | Msa0179960:three_prime_UTR |
| GAGTTTCATCGGTGCTTCTT+TGG | 0.351110 | 1_4:+67670006 | None:intergenic |
| AATAAAAGTAATACAGATAA+AGG | 0.356965 | 1_4:-67674917 | Msa0179960:CDS |
| GAATATTCCTGTTAAGATTA+GGG | 0.358481 | 1_4:-67669875 | Msa0179960:three_prime_UTR |
| TTATTCCGCACCGGATAATT+CGG | 0.364342 | 1_4:-67674894 | Msa0179960:CDS |
| TTTAAATACATGTCCACATC+AGG | 0.364943 | 1_4:-67670349 | Msa0179960:CDS |
| AGACATTTATTGATTGCCTT+TGG | 0.377473 | 1_4:-67670906 | Msa0179960:CDS |
| TGCTCCTTCTTCCCTAGGCT+TGG | 0.378296 | 1_4:+67671873 | None:intergenic |
| CTTTGGCGGATTGGCTGGTT+TGG | 0.380876 | 1_4:-67670889 | Msa0179960:CDS |
| CTTCCCCATGTTTACAGAGT+TGG | 0.382586 | 1_4:+67675431 | None:intergenic |
| TTATTTGTATTCTCAGTGTA+TGG | 0.385522 | 1_4:-67669906 | Msa0179960:three_prime_UTR |
| ATTATTACATATATATAATT+CGG | 0.390539 | 1_4:+67670059 | None:intergenic |
| TTGCTCGGCTTATTGGTTCT+TGG | 0.394746 | 1_4:+67670141 | None:intergenic |
| CATGTTTACAGAGTTGGTAT+TGG | 0.395971 | 1_4:+67675437 | None:intergenic |
| GCATAACAGCTTAAGATTTG+TGG | 0.397795 | 1_4:-67674786 | Msa0179960:intron |
| ATGTTGCCATTTATTGGGTT+TGG | 0.399709 | 1_4:+67675363 | None:intergenic |
| GTGTATGGCTTACAGAAAAT+AGG | 0.404932 | 1_4:-67669939 | Msa0179960:three_prime_UTR |
| AGCTTGAAATACCATCCTTC+AGG | 0.412173 | 1_4:-67671608 | Msa0179960:intron |
| CAATATGCTCCTTCTTCCCT+AGG | 0.415928 | 1_4:+67671868 | None:intergenic |
| GCGACAGTAACTCTTCTTCC+GGG | 0.421324 | 1_4:+67672250 | None:intergenic |
| CTCCTATCACTTATTTGTAA+TGG | 0.422561 | 1_4:+67669817 | None:intergenic |
| TTGAGACACCTCAGTATTTG+AGG | 0.427188 | 1_4:-67674826 | Msa0179960:CDS |
| CTAGGGAAGAAGGAGCATAT+TGG | 0.429341 | 1_4:-67671867 | Msa0179960:CDS |
| ATTGCCTTTGGCGGATTGGC+TGG | 0.434730 | 1_4:-67670894 | Msa0179960:CDS |
| ACATGAGTGGGGTCCGTATC+GGG | 0.438663 | 1_4:-67674620 | Msa0179960:CDS |
| TATTGGGTTTGGTTCAGGTT+CGG | 0.453688 | 1_4:+67675374 | None:intergenic |
| CAAATTGCGGTTGGCGCCCA+TGG | 0.453787 | 1_4:+67672228 | None:intergenic |
| TTCGGATGATGAAAGTAGTT+CGG | 0.454347 | 1_4:-67674876 | Msa0179960:CDS |
| ATTGATTGCCTTTGGCGGAT+TGG | 0.456827 | 1_4:-67670898 | Msa0179960:CDS |
| AATCTTAAGCTGTTATGCAT+TGG | 0.463655 | 1_4:+67674791 | None:intergenic |
| CAACTCTTGAACTCGCTACT+CGG | 0.468723 | 1_4:-67675230 | Msa0179960:CDS |
| CATTTATTGATTGCCTTTGG+CGG | 0.469674 | 1_4:-67670903 | Msa0179960:CDS |
| CAATACCAACTCTGTAAACA+TGG | 0.475788 | 1_4:-67675436 | Msa0179960:exon |
| CATTAGCAACCTCATTGATT+CGG | 0.476477 | 1_4:+67675057 | None:intergenic |
| CTTTCATCATCCGAATTATC+CGG | 0.480182 | 1_4:+67674884 | None:intergenic |
| GACCATTACAAATAAGTGAT+AGG | 0.481253 | 1_4:-67669819 | Msa0179960:three_prime_UTR |
| AGTTGGAACGTTGTCAATGA+TGG | 0.483106 | 1_4:+67675248 | None:intergenic |
| GTTTACAGAGTTGGTATTGG+AGG | 0.494879 | 1_4:+67675440 | None:intergenic |
| ACCATAATCCAAATTGCGGT+TGG | 0.503863 | 1_4:+67672219 | None:intergenic |
| AACATGAGTGGGGTCCGTAT+CGG | 0.504197 | 1_4:-67674621 | Msa0179960:CDS |
| AAGAAAGACATTCAAACTCC+GGG | 0.512731 | 1_4:-67673245 | Msa0179960:CDS |
| TCATCCAAGCCTAGGGAAGA+AGG | 0.513329 | 1_4:-67671877 | Msa0179960:CDS |
| TCTTAAAATTTATGTAGTCC+AGG | 0.518641 | 1_4:-67670092 | Msa0179960:three_prime_UTR |
| AACATCAACTAGCGTTGCCC+CGG | 0.521910 | 1_4:+67673227 | None:intergenic |
| GAGGTGTCTCAAGGTACTGC+AGG | 0.529237 | 1_4:+67674837 | None:intergenic |
| AAAGAAAGACATTCAAACTC+CGG | 0.529826 | 1_4:-67673246 | Msa0179960:CDS |
| GGGGCAACGCTAGTTGATGT+TGG | 0.530539 | 1_4:-67673225 | Msa0179960:CDS |
| TTTACAGAGTTGGTATTGGA+GGG | 0.534770 | 1_4:+67675441 | None:intergenic |
| AAATATAATTGGAGTTTCAT+CGG | 0.534780 | 1_4:+67669995 | None:intergenic |
| TTGTCTCATCATCCAAGCCT+AGG | 0.537203 | 1_4:-67671885 | Msa0179960:CDS |
| CCATTTGCGCAAACATGAGT+GGG | 0.538873 | 1_4:-67674632 | Msa0179960:CDS |
| AACTCTTGAACTCGCTACTC+GGG | 0.543550 | 1_4:-67675229 | Msa0179960:intron |
| GCAAATGGTGTGGAGCATCA+AGG | 0.551811 | 1_4:+67674647 | None:intergenic |
| GATTACCATAATCCAAATTG+CGG | 0.555577 | 1_4:+67672215 | None:intergenic |
| CCAATAAGCCGAGCAATGCT+GGG | 0.556012 | 1_4:-67670134 | Msa0179960:CDS |
| TAATTCGGACAATCAATGCC+TGG | 0.560474 | 1_4:+67670074 | None:intergenic |
| AAGAAGAGTTACTGTCGCCA+TGG | 0.560843 | 1_4:-67672245 | Msa0179960:CDS |
| AACGTTGTCAATGATGGAAG+CGG | 0.563328 | 1_4:+67675254 | None:intergenic |
| AAAGACCTACCTTCCCGATA+CGG | 0.564821 | 1_4:+67674607 | None:intergenic |
| GGTGGCTATGATTGTATAGT+CGG | 0.570409 | 1_4:-67671666 | Msa0179960:CDS |
| ATACTCAACCCAGCATTGCT+CGG | 0.573303 | 1_4:+67670126 | None:intergenic |
| CAAATGGTGTGGAGCATCAA+GGG | 0.574406 | 1_4:+67674648 | None:intergenic |
| ATTGTTCGACTCCCCTGATG+TGG | 0.576891 | 1_4:+67670336 | None:intergenic |
| ACGTTGTCAATGATGGAAGC+GGG | 0.580301 | 1_4:+67675255 | None:intergenic |
| AGAAGAGTTACTGTCGCCAT+GGG | 0.580848 | 1_4:-67672244 | Msa0179960:CDS |
| GAAGAAGCAGCGGCTGACGA+CGG | 0.583051 | 1_4:-67675406 | Msa0179960:CDS |
| GGGAACAGCTATGCTGACAG+TGG | 0.586260 | 1_4:+67675275 | None:intergenic |
| CGAGTAGCGAGTTCAAGAGT+TGG | 0.592023 | 1_4:+67675231 | None:intergenic |
| AATACCAACTCTGTAAACAT+GGG | 0.596123 | 1_4:-67675435 | Msa0179960:exon |
| AACTCCAATTATATTTGTGT+AGG | 0.598382 | 1_4:-67669988 | Msa0179960:three_prime_UTR |
| TGGTTTGGAAGAGAGTATTG+AGG | 0.599758 | 1_4:-67670874 | Msa0179960:CDS |
| AGATAAAGGTTATTCCGCAC+CGG | 0.600115 | 1_4:-67674903 | Msa0179960:CDS |
| TGTCTCATCATCCAAGCCTA+GGG | 0.600351 | 1_4:-67671884 | Msa0179960:CDS |
| ACCATTTGCGCAAACATGAG+TGG | 0.600994 | 1_4:-67674633 | Msa0179960:CDS |
| TCAAATACTGAGGTGTCTCA+AGG | 0.601277 | 1_4:+67674828 | None:intergenic |
| AAACATGAGCACCTGAAGGA+TGG | 0.601594 | 1_4:+67671597 | None:intergenic |
| GACACCTCAGTATTTGAGGA+AGG | 0.603915 | 1_4:-67674822 | Msa0179960:CDS |
| TTAAATACATGTCCACATCA+GGG | 0.610146 | 1_4:-67670348 | Msa0179960:CDS |
| ATTTAATGAATGTACATACA+AGG | 0.623297 | 1_4:-67671806 | Msa0179960:intron |
| TCATGTTTGCGCAAATGGTG+TGG | 0.628666 | 1_4:+67674637 | None:intergenic |
| GGAACAGCTATGCTGACAGT+GGG | 0.628924 | 1_4:+67675276 | None:intergenic |
| GATGATGAGACAACCTCGCG+TGG | 0.636166 | 1_4:+67671895 | None:intergenic |
| CAAACCAGCCAATCCGCCAA+AGG | 0.636167 | 1_4:+67670890 | None:intergenic |
| TCATCTAGATTTACCACGCG+AGG | 0.636923 | 1_4:-67671908 | Msa0179960:intron |
| TAAATACATGTCCACATCAG+GGG | 0.639657 | 1_4:-67670347 | Msa0179960:CDS |
| AAATGGTGTGGAGCATCAAG+GGG | 0.640817 | 1_4:+67674649 | None:intergenic |
| AGGGAAGAAGGAGCATATTG+GGG | 0.647186 | 1_4:-67671865 | Msa0179960:CDS |
| ATCATCCGAATTATCCGGTG+CGG | 0.653728 | 1_4:+67674889 | None:intergenic |
| GAGTGGGGTCCGTATCGGGA+AGG | 0.653942 | 1_4:-67674616 | Msa0179960:intron |
| ATAGTCGGTACCTCTGAGCA+TGG | 0.660543 | 1_4:-67671651 | Msa0179960:CDS |
| TGGTGTGGAGCATCAAGGGG+TGG | 0.663049 | 1_4:+67674652 | None:intergenic |
| ATACCAACTCTGTAAACATG+GGG | 0.670763 | 1_4:-67675434 | Msa0179960:exon |
| TGGGGAAGAAGAAGAAGCAG+CGG | 0.683363 | 1_4:-67675416 | Msa0179960:CDS |
| TAAGAAGAACAAATCAAACA+AGG | 0.684805 | 1_4:-67675304 | Msa0179960:CDS |
| AGAGCCTTCCTCAAATACTG+AGG | 0.688667 | 1_4:+67674818 | None:intergenic |
| GAGTCGAACAATTCGAACAG+AGG | 0.692468 | 1_4:-67670325 | Msa0179960:intron |
| GTTGACCAAATACTTGAACC+CGG | 0.705221 | 1_4:-67672268 | Msa0179960:CDS |
| ATTGATTCGGAAAATAGTCG+CGG | 0.716272 | 1_4:+67675070 | None:intergenic |
| AATAATCTGACCATGCTCAG+AGG | 0.716636 | 1_4:+67671641 | None:intergenic |
| AGAAAGACATTCAAACTCCG+GGG | 0.724344 | 1_4:-67673244 | Msa0179960:CDS |
| CATTTGCGCAAACATGAGTG+GGG | 0.732835 | 1_4:-67674631 | Msa0179960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAAAAAAGTAAAAAAT+TGG | + | chr1_4:67672106-67672125 | None:intergenic | 10.0% |
| !! | AAAGAAAATAAAACTTAAAA+AGG | + | chr1_4:67674205-67674224 | None:intergenic | 10.0% |
| !!! | AATGAAAGTAATTTTGAAAT+GGG | + | chr1_4:67670062-67670081 | None:intergenic | 15.0% |
| !!! | TAAAATTAACGTTTTTGTTA+TGG | + | chr1_4:67670086-67670105 | None:intergenic | 15.0% |
| !! | AATAAAAGTAATACAGATAA+AGG | - | chr1_4:67670346-67670365 | Msa0179960:CDS | 15.0% |
| !!! | TAATTTATAATTTTATGCTC+AGG | - | chr1_4:67670822-67670841 | Msa0179960:intron | 15.0% |
| !!! | TATATTCTATTTTTCTTGTT+AGG | - | chr1_4:67670976-67670995 | Msa0179960:intron | 15.0% |
| !! | AAATACAAAGAGAATTTAAA+GGG | + | chr1_4:67672129-67672148 | None:intergenic | 15.0% |
| !! | TTGCAATTTCAAATTAAAAT+CGG | + | chr1_4:67672347-67672366 | None:intergenic | 15.0% |
| !! | TAATAATGTTACTATTAACT+AGG | - | chr1_4:67672917-67672936 | Msa0179960:intron | 15.0% |
| !! | ATTATTATTGTTAAATTGCT+TGG | - | chr1_4:67673707-67673726 | Msa0179960:intron | 15.0% |
| !! | TTATTATTGTTAAATTGCTT+GGG | - | chr1_4:67673708-67673727 | Msa0179960:intron | 15.0% |
| !!! | CAATGAAAGTAATTTTGAAA+TGG | + | chr1_4:67670063-67670082 | None:intergenic | 20.0% |
| !! | TTATTTATGTGTGTATGAAT+AGG | - | chr1_4:67670309-67670328 | Msa0179960:intron | 20.0% |
| !! | AAAAATGTAAAGGAAATTCA+TGG | - | chr1_4:67670715-67670734 | Msa0179960:intron | 20.0% |
| !! | AAATTATCAGTACTAATCAT+TGG | + | chr1_4:67670808-67670827 | None:intergenic | 20.0% |
| !! | TCTAAATCACAATATAACAA+GGG | + | chr1_4:67670897-67670916 | None:intergenic | 20.0% |
| !! | ATCTAAATCACAATATAACA+AGG | + | chr1_4:67670898-67670917 | None:intergenic | 20.0% |
| !! | ATATATTTCAAAACTTTCCA+TGG | + | chr1_4:67671016-67671035 | None:intergenic | 20.0% |
| !!! | ATGGAAAGTTTTGAAATATA+TGG | - | chr1_4:67671015-67671034 | Msa0179960:intron | 20.0% |
| !!! | AAATCTGGAATAAATTCATT+TGG | - | chr1_4:67671450-67671469 | Msa0179960:intron | 20.0% |
| !! | GAAATACAAAGAGAATTTAA+AGG | + | chr1_4:67672130-67672149 | None:intergenic | 20.0% |
| !! | ATTTATAGATTATTAGAGTG+TGG | - | chr1_4:67672387-67672406 | Msa0179960:intron | 20.0% |
| !! | ATATTAGAATATTCTTGAAC+AGG | - | chr1_4:67672564-67672583 | Msa0179960:intron | 20.0% |
| !!! | CAGCAATTTTTTTTTAAACT+CGG | + | chr1_4:67672816-67672835 | None:intergenic | 20.0% |
| !! | AACATTATTAGAACAAAATC+TGG | + | chr1_4:67672907-67672926 | None:intergenic | 20.0% |
| !! | AAAGAAAACTTCAAAATCAT+AGG | + | chr1_4:67673213-67673232 | None:intergenic | 20.0% |
| !!! | ATGATTTTGAAGTTTTCTTT+TGG | - | chr1_4:67673213-67673232 | Msa0179960:intron | 20.0% |
| !!! | TGATTTTGAAGTTTTCTTTT+GGG | - | chr1_4:67673214-67673233 | Msa0179960:intron | 20.0% |
| !! | ATTTAATGAATGTACATACA+AGG | - | chr1_4:67673457-67673476 | Msa0179960:intron | 20.0% |
| !! | TTGAACAAGTTTATTAATTC+TGG | - | chr1_4:67673768-67673787 | Msa0179960:intron | 20.0% |
| !! | TGAACAAGTTTATTAATTCT+GGG | - | chr1_4:67673769-67673788 | Msa0179960:intron | 20.0% |
| !! | ATAGATTAATAGGAAAACAA+TGG | + | chr1_4:67673813-67673832 | None:intergenic | 20.0% |
| !! | CGAAAAGAAAATAGATTAAT+AGG | + | chr1_4:67673823-67673842 | None:intergenic | 20.0% |
| !! | AAAAAAACAGAAAGAAAATG+AGG | + | chr1_4:67674134-67674153 | None:intergenic | 20.0% |
| !! | CATTATATATGTGATTATTG+CGG | - | chr1_4:67674443-67674462 | Msa0179960:intron | 20.0% |
| !! | AAAATTTATATTTAGCACCA+TGG | + | chr1_4:67674826-67674845 | None:intergenic | 20.0% |
| !! | AAATATAATTGGAGTTTCAT+CGG | + | chr1_4:67675271-67675290 | None:intergenic | 20.0% |
| ! | TAAGAAGAACAAATCAAACA+AGG | - | chr1_4:67669959-67669978 | Msa0179960:three_prime_UTR | 25.0% |
| ! | GTTTAGTATGTGTTTAATGT+TGG | - | chr1_4:67670557-67670576 | Msa0179960:intron | 25.0% |
| !! | TTAATGTTGGTTGTTTGTAT+TGG | - | chr1_4:67670570-67670589 | Msa0179960:intron | 25.0% |
| ! | AGAATTTCTAATTTCTGTAG+TGG | - | chr1_4:67670689-67670708 | Msa0179960:intron | 25.0% |
| ! | TGGAAGAATGATTTAAATTC+TGG | - | chr1_4:67670735-67670754 | Msa0179960:intron | 25.0% |
| ! | GGAAGAATGATTTAAATTCT+GGG | - | chr1_4:67670736-67670755 | Msa0179960:intron | 25.0% |
| ! | CTAAATCACAATATAACAAG+GGG | + | chr1_4:67670896-67670915 | None:intergenic | 25.0% |
| ! | AGAATATACGAAAACAATAC+TGG | + | chr1_4:67670964-67670983 | None:intergenic | 25.0% |
| !! | AATTTTCATGTCAGTTTGAT+AGG | + | chr1_4:67671128-67671147 | None:intergenic | 25.0% |
| !!! | TCTATAGCATTGTAGTTTTA+TGG | + | chr1_4:67671154-67671173 | None:intergenic | 25.0% |
| ! | ATAAAACTACAATGCTATAG+AGG | - | chr1_4:67671153-67671172 | Msa0179960:intron | 25.0% |
| ! | CATGTAAAAGATATGAAATC+TGG | - | chr1_4:67671435-67671454 | Msa0179960:intron | 25.0% |
| ! | AAATTCATTTGGTTGAAAGT+TGG | - | chr1_4:67671461-67671480 | Msa0179960:intron | 25.0% |
| !!! | ATGGAAAGAAGTTATTTTGA+AGG | - | chr1_4:67671583-67671602 | Msa0179960:intron | 25.0% |
| !!! | TGGAAAGAAGTTATTTTGAA+GGG | - | chr1_4:67671584-67671603 | Msa0179960:intron | 25.0% |
| ! | AAATGAGTTTATGGAAACTT+TGG | - | chr1_4:67671659-67671678 | Msa0179960:CDS | 25.0% |
| ! | AATAAATTAATCATCGCAAC+TGG | + | chr1_4:67671697-67671716 | None:intergenic | 25.0% |
| ! | AGAAAGGAAAAAGATTAAAC+CGG | + | chr1_4:67671805-67671824 | None:intergenic | 25.0% |
| !!! | TTCATTGTGTTGGTTATTTA+AGG | - | chr1_4:67671839-67671858 | Msa0179960:CDS | 25.0% |
| ! | CATTGCAATAATAACTTCTT+AGG | - | chr1_4:67671984-67672003 | Msa0179960:intron | 25.0% |
| ! | ATACATTTCACAAGATTTCT+TGG | - | chr1_4:67672079-67672098 | Msa0179960:intron | 25.0% |
| ! | TACATTTCACAAGATTTCTT+GGG | - | chr1_4:67672080-67672099 | Msa0179960:intron | 25.0% |
| ! | AAGGGAAATGAAAAAGAAAA+AGG | + | chr1_4:67672152-67672171 | None:intergenic | 25.0% |
| !!! | TTTGTATATTGGCTTTTAAC+TGG | - | chr1_4:67672250-67672269 | Msa0179960:CDS | 25.0% |
| ! | AAGGAAAATGTAAGAGAAAT+AGG | + | chr1_4:67672315-67672334 | None:intergenic | 25.0% |
| ! | CAAATTAAAATCGGAGAAAA+GGG | + | chr1_4:67672338-67672357 | None:intergenic | 25.0% |
| ! | TCAAATTAAAATCGGAGAAA+AGG | + | chr1_4:67672339-67672358 | None:intergenic | 25.0% |
| ! | AACAGTAAATGAAACTATAG+TGG | - | chr1_4:67672611-67672630 | Msa0179960:intron | 25.0% |
| !!! | TTTTTTTTAAACTCGGTATC+TGG | + | chr1_4:67672809-67672828 | None:intergenic | 25.0% |
| ! | CGAGTTTAAAAAAAAATTGC+TGG | - | chr1_4:67672814-67672833 | Msa0179960:intron | 25.0% |
| ! | AAAAAATGCCAAATTGAAAG+AGG | + | chr1_4:67673157-67673176 | None:intergenic | 25.0% |
| ! | ATATTGTCATTGTGTTATCA+AGG | + | chr1_4:67673242-67673261 | None:intergenic | 25.0% |
| ! | AATAGGCTATGGATATTAAA+AGG | + | chr1_4:67673514-67673533 | None:intergenic | 25.0% |
| ! | TGACAAGTAAACAAAAGAAA+GGG | + | chr1_4:67673568-67673587 | None:intergenic | 25.0% |
| ! | TTGACAAGTAAACAAAAGAA+AGG | + | chr1_4:67673569-67673588 | None:intergenic | 25.0% |
| ! | ACATGAGATTAAAGTTATCA+GGG | - | chr1_4:67673929-67673948 | Msa0179960:intron | 25.0% |
| ! | ATCAGTTGCATTATAATGTT+TGG | + | chr1_4:67674169-67674188 | None:intergenic | 25.0% |
| !! | AAATATATATGTGATGATGC+AGG | - | chr1_4:67674285-67674304 | Msa0179960:intron | 25.0% |
| !!! | GCAGGTGTTTTTATTTAAAT+TGG | - | chr1_4:67674303-67674322 | Msa0179960:intron | 25.0% |
| ! | CGCAATAATCACATATATAA+TGG | + | chr1_4:67674445-67674464 | None:intergenic | 25.0% |
| ! | AAATTTATGGAATCTCTGAT+TGG | + | chr1_4:67674484-67674503 | None:intergenic | 25.0% |
| ! | CATAAATTTGACAGAATCAT+CGG | - | chr1_4:67674495-67674514 | Msa0179960:intron | 25.0% |
| ! | AATTCTAAATAGTGTAGGTT+TGG | + | chr1_4:67674608-67674627 | None:intergenic | 25.0% |
| ! | ACTTGAATTCTAAATAGTGT+AGG | + | chr1_4:67674613-67674632 | None:intergenic | 25.0% |
| !!! | TTTTTTAGGGAAAAAATACG+AGG | + | chr1_4:67675037-67675056 | None:intergenic | 25.0% |
| !! | TCCTCATGTTTTTCTTTTAT+AGG | - | chr1_4:67675071-67675090 | Msa0179960:CDS | 25.0% |
| ! | TCCTATAAAAGAAAAACATG+AGG | + | chr1_4:67675075-67675094 | None:intergenic | 25.0% |
| !! | TCATGTTTTTCTTTTATAGG+AGG | - | chr1_4:67675074-67675093 | Msa0179960:CDS | 25.0% |
| ! | TCTTAAAATTTATGTAGTCC+AGG | - | chr1_4:67675171-67675190 | Msa0179960:intron | 25.0% |
| ! | AACTCCAATTATATTTGTGT+AGG | - | chr1_4:67675275-67675294 | Msa0179960:CDS | 25.0% |
| ! | TTATTTGTATTCTCAGTGTA+TGG | - | chr1_4:67675357-67675376 | Msa0179960:CDS | 25.0% |
| ! | GAATATTCCTGTTAAGATTA+GGG | - | chr1_4:67675388-67675407 | Msa0179960:CDS | 25.0% |
| !!! | CGATAAGAATCACATTTTTT+TGG | + | chr1_4:67675415-67675434 | None:intergenic | 25.0% |
| AATACCAACTCTGTAAACAT+GGG | - | chr1_4:67669828-67669847 | Msa0179960:three_prime_UTR | 30.0% | |
| TTTATGTGTGTATGAATAGG+TGG | - | chr1_4:67670312-67670331 | Msa0179960:intron | 30.0% | |
| AATCTTAAGCTGTTATGCAT+TGG | + | chr1_4:67670475-67670494 | None:intergenic | 30.0% | |
| TTGTTTGTATTGGAATTTGC+AGG | - | chr1_4:67670580-67670599 | Msa0179960:intron | 30.0% | |
| TGTTTGTATTGGAATTTGCA+GGG | - | chr1_4:67670581-67670600 | Msa0179960:intron | 30.0% | |
| !! | GTAGTGGATGAAAAATGTAA+AGG | - | chr1_4:67670705-67670724 | Msa0179960:intron | 30.0% |
| GATTTAGATCTAATCGATGA+TGG | - | chr1_4:67670909-67670928 | Msa0179960:intron | 30.0% | |
| CAATGTGTGGTTCAAATTAA+CGG | + | chr1_4:67671069-67671088 | None:intergenic | 30.0% | |
| AATGAACAGTGTTATCGAAT+CGG | - | chr1_4:67671185-67671204 | Msa0179960:intron | 30.0% | |
| ATTTGGTTGAAAGTTGGAAT+CGG | - | chr1_4:67671467-67671486 | Msa0179960:intron | 30.0% | |
| CTTAATAACGAAATCATGAC+TGG | - | chr1_4:67671499-67671518 | Msa0179960:intron | 30.0% | |
| GGTGAGAAAATCAAATCAAA+TGG | - | chr1_4:67671564-67671583 | Msa0179960:intron | 30.0% | |
| !!! | AAAGAAGTTATTTTGAAGGG+AGG | - | chr1_4:67671587-67671606 | Msa0179960:intron | 30.0% |
| CCATAAACTCATTTAGAGAA+AGG | + | chr1_4:67671653-67671672 | None:intergenic | 30.0% | |
| CCTTTCTCTAAATGAGTTTA+TGG | - | chr1_4:67671650-67671669 | Msa0179960:CDS | 30.0% | |
| GAAAGGAAAAAGATTAAACC+GGG | + | chr1_4:67671804-67671823 | None:intergenic | 30.0% | |
| TATTGCAATGTATCAAAACC+TGG | + | chr1_4:67671974-67671993 | None:intergenic | 30.0% | |
| AAAGAAAGACATTCAAACTC+CGG | - | chr1_4:67672017-67672036 | Msa0179960:intron | 30.0% | |
| !! | AGTTGATGTTGGCTTATTTA+AGG | - | chr1_4:67672049-67672068 | Msa0179960:intron | 30.0% |
| GGTTGTCATTGAAAAAACAA+GGG | + | chr1_4:67672170-67672189 | None:intergenic | 30.0% | |
| AGGTTGTCATTGAAAAAACA+AGG | + | chr1_4:67672171-67672190 | None:intergenic | 30.0% | |
| ATAATAAGATGTCCTTGAGA+AGG | + | chr1_4:67672191-67672210 | None:intergenic | 30.0% | |
| CCAATATACAAACAACTACA+TGG | + | chr1_4:67672242-67672261 | None:intergenic | 30.0% | |
| CCATGTAGTTGTTTGTATAT+TGG | - | chr1_4:67672239-67672258 | Msa0179960:CDS | 30.0% | |
| !! | TTTTAACTGGAAGTTCAATG+AGG | - | chr1_4:67672263-67672282 | Msa0179960:CDS | 30.0% |
| TTTAACTGGAAGTTCAATGA+GGG | - | chr1_4:67672264-67672283 | Msa0179960:CDS | 30.0% | |
| ACTATGCAACTGAATAACTA+TGG | - | chr1_4:67672506-67672525 | Msa0179960:intron | 30.0% | |
| AGAATATTCTTGAACAGGTT+AGG | - | chr1_4:67672569-67672588 | Msa0179960:intron | 30.0% | |
| TACTAGAAAGCAGAAATTCT+TGG | - | chr1_4:67672650-67672669 | Msa0179960:intron | 30.0% | |
| ACTAGAAAGCAGAAATTCTT+GGG | - | chr1_4:67672651-67672670 | Msa0179960:intron | 30.0% | |
| !! | AACTTTGCTCTAGCTTTAAA+TGG | - | chr1_4:67672729-67672748 | Msa0179960:intron | 30.0% |
| !! | ACTTTGCTCTAGCTTTAAAT+GGG | - | chr1_4:67672730-67672749 | Msa0179960:intron | 30.0% |
| CAATAGTAGCATATAGAAAG+CGG | - | chr1_4:67672860-67672879 | Msa0179960:intron | 30.0% | |
| AATAGTAGCATATAGAAAGC+GGG | - | chr1_4:67672861-67672880 | Msa0179960:intron | 30.0% | |
| GTATAGTGAATCAGATCATA+TGG | + | chr1_4:67672956-67672975 | None:intergenic | 30.0% | |
| GATTACCATAATCCAAATTG+CGG | + | chr1_4:67673051-67673070 | None:intergenic | 30.0% | |
| !! | AGCATGCTTTTCTTTTTCAT+TGG | - | chr1_4:67673119-67673138 | Msa0179960:intron | 30.0% |
| ! | AGTTTATTAATTCTGGGAGA+TGG | - | chr1_4:67673775-67673794 | Msa0179960:intron | 30.0% |
| TGAATATTGATGCCAAACTA+CGG | - | chr1_4:67673886-67673905 | Msa0179960:intron | 30.0% | |
| TTAATCTCATGTGAACTCTT+GGG | + | chr1_4:67673921-67673940 | None:intergenic | 30.0% | |
| TTTAATCTCATGTGAACTCT+TGG | + | chr1_4:67673922-67673941 | None:intergenic | 30.0% | |
| CACATGAGATTAAAGTTATC+AGG | - | chr1_4:67673928-67673947 | Msa0179960:intron | 30.0% | |
| CATGAGATTAAAGTTATCAG+GGG | - | chr1_4:67673930-67673949 | Msa0179960:intron | 30.0% | |
| ATGATAGGAAAAACACTTGT+GGG | + | chr1_4:67674059-67674078 | None:intergenic | 30.0% | |
| TATGATAGGAAAAACACTTG+TGG | + | chr1_4:67674060-67674079 | None:intergenic | 30.0% | |
| GTTAGCAAACTCATTATGAT+AGG | + | chr1_4:67674074-67674093 | None:intergenic | 30.0% | |
| AAACAGAAAGAAAATGAGGA+GGG | + | chr1_4:67674130-67674149 | None:intergenic | 30.0% | |
| AAAACAGAAAGAAAATGAGG+AGG | + | chr1_4:67674131-67674150 | None:intergenic | 30.0% | |
| TTATAATGCAACTGATGCAT+AGG | - | chr1_4:67674173-67674192 | Msa0179960:intron | 30.0% | |
| TATAATGCAACTGATGCATA+GGG | - | chr1_4:67674174-67674193 | Msa0179960:intron | 30.0% | |
| ! | AGACATTTATTGATTGCCTT+TGG | - | chr1_4:67674357-67674376 | Msa0179960:intron | 30.0% |
| TGAGGAAGATGATAACTTTA+AGG | - | chr1_4:67674407-67674426 | Msa0179960:intron | 30.0% | |
| CGATGATTCTGTCAAATTTA+TGG | + | chr1_4:67674497-67674516 | None:intergenic | 30.0% | |
| TAAATAGTGTAGGTTTGGAT+TGG | + | chr1_4:67674603-67674622 | None:intergenic | 30.0% | |
| TGAAAACATGTGTCTTTCTA+AGG | - | chr1_4:67674734-67674753 | Msa0179960:intron | 30.0% | |
| !! | TTTTCCCTGCATTTTTTAGA+GGG | + | chr1_4:67674868-67674887 | None:intergenic | 30.0% |
| !! | TTTTTCCCTGCATTTTTTAG+AGG | + | chr1_4:67674869-67674888 | None:intergenic | 30.0% |
| TTTAAATACATGTCCACATC+AGG | - | chr1_4:67674914-67674933 | Msa0179960:CDS | 30.0% | |
| TTAAATACATGTCCACATCA+GGG | - | chr1_4:67674915-67674934 | Msa0179960:CDS | 30.0% | |
| GTGACCTACACAAATATAAT+TGG | + | chr1_4:67675282-67675301 | None:intergenic | 30.0% | |
| !! | AAACTTTAGTTTGTCGTGTA+TGG | - | chr1_4:67675309-67675328 | Msa0179960:CDS | 30.0% |
| CGAATATTCCTGTTAAGATT+AGG | - | chr1_4:67675387-67675406 | Msa0179960:CDS | 30.0% | |
| GACCATTACAAATAAGTGAT+AGG | - | chr1_4:67675444-67675463 | Msa0179960:five_prime_UTR | 30.0% | |
| CTCCTATCACTTATTTGTAA+TGG | + | chr1_4:67675449-67675468 | None:intergenic | 30.0% | |
| !! | TTTACAGAGTTGGTATTGGA+GGG | + | chr1_4:67669825-67669844 | None:intergenic | 35.0% |
| !! | CATGTTTACAGAGTTGGTAT+TGG | + | chr1_4:67669829-67669848 | None:intergenic | 35.0% |
| CAATACCAACTCTGTAAACA+TGG | - | chr1_4:67669827-67669846 | Msa0179960:three_prime_UTR | 35.0% | |
| ATACCAACTCTGTAAACATG+GGG | - | chr1_4:67669829-67669848 | Msa0179960:three_prime_UTR | 35.0% | |
| ! | ATGTTGCCATTTATTGGGTT+TGG | + | chr1_4:67669903-67669922 | None:intergenic | 35.0% |
| ! | CATCGATGTTGCCATTTATT+GGG | + | chr1_4:67669908-67669927 | None:intergenic | 35.0% |
| ! | TCATCGATGTTGCCATTTAT+TGG | + | chr1_4:67669909-67669928 | None:intergenic | 35.0% |
| !!! | TTTTGATTTCCCTTTTCAGC+TGG | - | chr1_4:67670152-67670171 | Msa0179960:CDS | 35.0% |
| !! | ATTGATTCGGAAAATAGTCG+CGG | + | chr1_4:67670196-67670215 | None:intergenic | 35.0% |
| ! | GACTATTTTCCGAATCAATG+AGG | - | chr1_4:67670197-67670216 | Msa0179960:intron | 35.0% |
| ! | CATTAGCAACCTCATTGATT+CGG | + | chr1_4:67670209-67670228 | None:intergenic | 35.0% |
| CTTTCATCATCCGAATTATC+CGG | + | chr1_4:67670382-67670401 | None:intergenic | 35.0% | |
| TTCGGATGATGAAAGTAGTT+CGG | - | chr1_4:67670387-67670406 | Msa0179960:intron | 35.0% | |
| GCATAACAGCTTAAGATTTG+TGG | - | chr1_4:67670477-67670496 | Msa0179960:intron | 35.0% | |
| AACAGCTTAAGATTTGTGGT+TGG | - | chr1_4:67670481-67670500 | Msa0179960:intron | 35.0% | |
| GTTTGTATTGGAATTTGCAG+GGG | - | chr1_4:67670582-67670601 | Msa0179960:intron | 35.0% | |
| TTGGCAAATGTTTAGCTGAT+GGG | + | chr1_4:67670789-67670808 | None:intergenic | 35.0% | |
| ATTGGCAAATGTTTAGCTGA+TGG | + | chr1_4:67670790-67670809 | None:intergenic | 35.0% | |
| !!! | AATCGGTGGCAGTTTTTTTT+TGG | - | chr1_4:67671218-67671237 | Msa0179960:intron | 35.0% |
| !!! | ATCGGTGGCAGTTTTTTTTT+GGG | - | chr1_4:67671219-67671238 | Msa0179960:intron | 35.0% |
| TTCATTAGCACTGTTGTCTA+TGG | + | chr1_4:67671364-67671383 | None:intergenic | 35.0% | |
| ATCTGTGTGTGTTAGAAGTA+AGG | - | chr1_4:67671537-67671556 | Msa0179960:intron | 35.0% | |
| GGAAAACCTAAGAATACTAG+AGG | - | chr1_4:67671608-67671627 | Msa0179960:intron | 35.0% | |
| ACTTCTCCTCTAGTATTCTT+AGG | + | chr1_4:67671617-67671636 | None:intergenic | 35.0% | |
| !!! | GTTGTCGACTTTTATTGTGT+TGG | - | chr1_4:67671760-67671779 | Msa0179960:intron | 35.0% |
| !! | AACACTTGGTGTGTTAAGAA+AGG | + | chr1_4:67671821-67671840 | None:intergenic | 35.0% |
| TAACCAACACAATGAACACT+TGG | + | chr1_4:67671835-67671854 | None:intergenic | 35.0% | |
| AAGAAAGACATTCAAACTCC+GGG | - | chr1_4:67672018-67672037 | Msa0179960:intron | 35.0% | |
| TTTCAATGACAACCTTCTCA+AGG | - | chr1_4:67672176-67672195 | Msa0179960:intron | 35.0% | |
| TTAAAATCGGAGAAAAGGGA+AGG | + | chr1_4:67672334-67672353 | None:intergenic | 35.0% | |
| ATTGCTGGAAACAGAAATTC+AGG | - | chr1_4:67672829-67672848 | Msa0179960:intron | 35.0% | |
| ATACGCTTCCTCTTTCAATT+TGG | - | chr1_4:67673146-67673165 | Msa0179960:intron | 35.0% | |
| TTCATTCCAGAATTTCTCCT+TGG | - | chr1_4:67673297-67673316 | Msa0179960:intron | 35.0% | |
| AGCATAAATTCATGTAGCCA+AGG | + | chr1_4:67673317-67673336 | None:intergenic | 35.0% | |
| TACAGTGGTCGATGAATAAT+AGG | + | chr1_4:67673531-67673550 | None:intergenic | 35.0% | |
| TGTTTACTTGTCAACGTTAC+AGG | - | chr1_4:67673575-67673594 | Msa0179960:intron | 35.0% | |
| GTTTACTTGTCAACGTTACA+GGG | - | chr1_4:67673576-67673595 | Msa0179960:intron | 35.0% | |
| AGTACATGATATTGAGCCAT+TGG | + | chr1_4:67673956-67673975 | None:intergenic | 35.0% | |
| TGAGAACAGAAAATTCACAC+TGG | + | chr1_4:67674010-67674029 | None:intergenic | 35.0% | |
| ! | ATTTTCTGTTCTCACATGAG+TGG | - | chr1_4:67674016-67674035 | Msa0179960:intron | 35.0% |
| ! | ATGAGTGGAAAGTATAGCAT+TGG | - | chr1_4:67674031-67674050 | Msa0179960:intron | 35.0% |
| ! | TGAGTGGAAAGTATAGCATT+GGG | - | chr1_4:67674032-67674051 | Msa0179960:intron | 35.0% |
| !! | ATGAGTTTGCTAACAAGCAA+AGG | - | chr1_4:67674080-67674099 | Msa0179960:intron | 35.0% |
| AAGAAAATGAGGAGGGAAAA+GGG | + | chr1_4:67674123-67674142 | None:intergenic | 35.0% | |
| AAAGAAAATGAGGAGGGAAA+AGG | + | chr1_4:67674124-67674143 | None:intergenic | 35.0% | |
| !!! | GTGTTTTGAGTTTCACTTAC+TGG | - | chr1_4:67674236-67674255 | Msa0179960:intron | 35.0% |
| ! | CATTTATTGATTGCCTTTGG+CGG | - | chr1_4:67674360-67674379 | Msa0179960:intron | 35.0% |
| GTGTTACACATTTCTGTGTA+AGG | - | chr1_4:67674631-67674650 | Msa0179960:CDS | 35.0% | |
| TCTCATACGAAAACATGTCT+TGG | - | chr1_4:67674699-67674718 | Msa0179960:intron | 35.0% | |
| ! | AATCACCCTCTAAAAAATGC+AGG | - | chr1_4:67674860-67674879 | Msa0179960:CDS | 35.0% |
| ! | ATCACCCTCTAAAAAATGCA+GGG | - | chr1_4:67674861-67674880 | Msa0179960:CDS | 35.0% |
| AATGCAGGGAAAAAATGCAA+AGG | - | chr1_4:67674875-67674894 | Msa0179960:CDS | 35.0% | |
| TAAATACATGTCCACATCAG+GGG | - | chr1_4:67674916-67674935 | Msa0179960:CDS | 35.0% | |
| GTGTATGGCTTACAGAAAAT+AGG | - | chr1_4:67675324-67675343 | Msa0179960:CDS | 35.0% | |
| ! | TTTTGGTCCCTAATCTTAAC+AGG | + | chr1_4:67675398-67675417 | None:intergenic | 35.0% |
| !! | AGTTGGTATTGGAGGGTTTT+GGG | + | chr1_4:67669818-67669837 | None:intergenic | 40.0% |
| !! | GTTTACAGAGTTGGTATTGG+AGG | + | chr1_4:67669826-67669845 | None:intergenic | 40.0% |
| ! | TATTGGGTTTGGTTCAGGTT+CGG | + | chr1_4:67669892-67669911 | None:intergenic | 40.0% |
| ! | CCATTTATTGGGTTTGGTTC+AGG | + | chr1_4:67669897-67669916 | None:intergenic | 40.0% |
| CCTGAACCAAACCCAATAAA+TGG | - | chr1_4:67669894-67669913 | Msa0179960:three_prime_UTR | 40.0% | |
| ! | AACGTTGTCAATGATGGAAG+CGG | + | chr1_4:67670012-67670031 | None:intergenic | 40.0% |
| AGTTGGAACGTTGTCAATGA+TGG | + | chr1_4:67670018-67670037 | None:intergenic | 40.0% | |
| ! | TTTGACTAGCCAGCTGAAAA+GGG | + | chr1_4:67670164-67670183 | None:intergenic | 40.0% |
| ! | ATTTGACTAGCCAGCTGAAA+AGG | + | chr1_4:67670165-67670184 | None:intergenic | 40.0% |
| AGATAAAGGTTATTCCGCAC+CGG | - | chr1_4:67670360-67670379 | Msa0179960:CDS | 40.0% | |
| TTATTCCGCACCGGATAATT+CGG | - | chr1_4:67670369-67670388 | Msa0179960:CDS | 40.0% | |
| ! | TCAAATACTGAGGTGTCTCA+AGG | + | chr1_4:67670438-67670457 | None:intergenic | 40.0% |
| TTGAGACACCTCAGTATTTG+AGG | - | chr1_4:67670437-67670456 | Msa0179960:intron | 40.0% | |
| TGGCAAATGTTTAGCTGATG+GGG | + | chr1_4:67670788-67670807 | None:intergenic | 40.0% | |
| AACGGACATTAAACACTCCA+TGG | + | chr1_4:67671051-67671070 | None:intergenic | 40.0% | |
| ATTAGCACTGTTGTCTATGG+CGG | + | chr1_4:67671361-67671380 | None:intergenic | 40.0% | |
| GAATGTTCGACAGTGAGTAT+AGG | - | chr1_4:67671381-67671400 | Msa0179960:intron | 40.0% | |
| GTGTGTTAGAAGTAAGGTTG+TGG | - | chr1_4:67671543-67671562 | Msa0179960:intron | 40.0% | |
| ! | TTATTAGTCACCCCAGCTTT+TGG | - | chr1_4:67671712-67671731 | Msa0179960:intron | 40.0% |
| ! | TATTAGTCACCCCAGCTTTT+GGG | - | chr1_4:67671713-67671732 | Msa0179960:intron | 40.0% |
| AGGAAAAAGATTAAACCGGG+TGG | + | chr1_4:67671801-67671820 | None:intergenic | 40.0% | |
| ACACCAAGTGTTCATTGTGT+TGG | - | chr1_4:67671829-67671848 | Msa0179960:CDS | 40.0% | |
| !!! | ACTTTTGTTGTTTTGCCCCA+TGG | - | chr1_4:67671941-67671960 | Msa0179960:intron | 40.0% |
| AGAAAGACATTCAAACTCCG+GGG | - | chr1_4:67672019-67672038 | Msa0179960:intron | 40.0% | |
| AGCTAGAGCAAAGTTCCATA+TGG | + | chr1_4:67672724-67672743 | None:intergenic | 40.0% | |
| GGTTCATAGATCGACTAATC+CGG | + | chr1_4:67672788-67672807 | None:intergenic | 40.0% | |
| GTTGACCAAATACTTGAACC+CGG | - | chr1_4:67672995-67673014 | Msa0179960:intron | 40.0% | |
| TTCTTCCGGGTTCAAGTATT+TGG | + | chr1_4:67673003-67673022 | None:intergenic | 40.0% | |
| ACCATAATCCAAATTGCGGT+TGG | + | chr1_4:67673047-67673066 | None:intergenic | 40.0% | |
| ATGTAGCCAAGGAGAAATTC+TGG | + | chr1_4:67673306-67673325 | None:intergenic | 40.0% | |
| ! | TAGGGAAGAAGGAGCATATT+GGG | - | chr1_4:67673397-67673416 | Msa0179960:intron | 40.0% |
| GGTCGATGAATAATAGGCTA+TGG | + | chr1_4:67673525-67673544 | None:intergenic | 40.0% | |
| AAAAGAAAGGGTTCGTGAGT+AGG | + | chr1_4:67673556-67673575 | None:intergenic | 40.0% | |
| GGTGGCTATGATTGTATAGT+CGG | - | chr1_4:67673597-67673616 | Msa0179960:intron | 40.0% | |
| AATAATCTGACCATGCTCAG+AGG | + | chr1_4:67673625-67673644 | None:intergenic | 40.0% | |
| AGCTTGAAATACCATCCTTC+AGG | - | chr1_4:67673655-67673674 | Msa0179960:intron | 40.0% | |
| GTTAAAACATGAGCACCTGA+AGG | + | chr1_4:67673673-67673692 | None:intergenic | 40.0% | |
| TTTAAGCGTTCTCTCTACGT+TGG | - | chr1_4:67673738-67673757 | Msa0179960:intron | 40.0% | |
| TTAAAGTTATCAGGGGCCAA+TGG | - | chr1_4:67673937-67673956 | Msa0179960:intron | 40.0% | |
| GAACAGAAAATTCACACTGG+AGG | + | chr1_4:67674007-67674026 | None:intergenic | 40.0% | |
| AGAAAATGAGGAGGGAAAAG+GGG | + | chr1_4:67674122-67674141 | None:intergenic | 40.0% | |
| !! | TGGTTTGGAAGAGAGTATTG+AGG | - | chr1_4:67674389-67674408 | Msa0179960:intron | 40.0% |
| GAATGTGTTGCAACAGAGAA+AGG | + | chr1_4:67674528-67674547 | None:intergenic | 40.0% | |
| TAATTCGGACAATCAATGCC+TGG | + | chr1_4:67675192-67675211 | None:intergenic | 40.0% | |
| !! | GTTGGTATTGGAGGGTTTTG+GGG | + | chr1_4:67669817-67669836 | None:intergenic | 45.0% |
| !!! | GAGTTGGTATTGGAGGGTTT+TGG | + | chr1_4:67669819-67669838 | None:intergenic | 45.0% |
| CTTCCCCATGTTTACAGAGT+TGG | + | chr1_4:67669835-67669854 | None:intergenic | 45.0% | |
| ! | ACGTTGTCAATGATGGAAGC+GGG | + | chr1_4:67670011-67670030 | None:intergenic | 45.0% |
| CAACTCTTGAACTCGCTACT+CGG | - | chr1_4:67670033-67670052 | Msa0179960:three_prime_UTR | 45.0% | |
| AACTCTTGAACTCGCTACTC+GGG | - | chr1_4:67670034-67670053 | Msa0179960:three_prime_UTR | 45.0% | |
| ATCATCCGAATTATCCGGTG+CGG | + | chr1_4:67670377-67670396 | None:intergenic | 45.0% | |
| GACACCTCAGTATTTGAGGA+AGG | - | chr1_4:67670441-67670460 | Msa0179960:intron | 45.0% | |
| AGAGCCTTCCTCAAATACTG+AGG | + | chr1_4:67670448-67670467 | None:intergenic | 45.0% | |
| ACTTCAGAAAATGCAGCTGC+AGG | + | chr1_4:67670516-67670535 | None:intergenic | 45.0% | |
| ! | AAATGGTGTGGAGCATCAAG+GGG | + | chr1_4:67670617-67670636 | None:intergenic | 45.0% |
| ! | CAAATGGTGTGGAGCATCAA+GGG | + | chr1_4:67670618-67670637 | None:intergenic | 45.0% |
| TCATGTTTGCGCAAATGGTG+TGG | + | chr1_4:67670629-67670648 | None:intergenic | 45.0% | |
| ACCATTTGCGCAAACATGAG+TGG | - | chr1_4:67670630-67670649 | Msa0179960:intron | 45.0% | |
| CCATTTGCGCAAACATGAGT+GGG | - | chr1_4:67670631-67670650 | Msa0179960:intron | 45.0% | |
| CATTTGCGCAAACATGAGTG+GGG | - | chr1_4:67670632-67670651 | Msa0179960:intron | 45.0% | |
| AAAGACCTACCTTCCCGATA+CGG | + | chr1_4:67670659-67670678 | None:intergenic | 45.0% | |
| GGCAAATGTTTAGCTGATGG+GGG | + | chr1_4:67670787-67670806 | None:intergenic | 45.0% | |
| GACAGCAGAATCATTCATGC+AGG | + | chr1_4:67670872-67670891 | None:intergenic | 45.0% | |
| AGGAGAGTAATCGAAAGCCA+TGG | - | chr1_4:67670996-67671015 | Msa0179960:intron | 45.0% | |
| TATATGGTTCGTGCATGCCA+TGG | - | chr1_4:67671031-67671050 | Msa0179960:intron | 45.0% | |
| TGTTATCGAATCGGCCATGA+CGG | - | chr1_4:67671194-67671213 | Msa0179960:intron | 45.0% | |
| CTCTCCACCATACCCAATTT+CGG | - | chr1_4:67671242-67671261 | Msa0179960:intron | 45.0% | |
| ATATCGGCCGAAATTGGGTA+TGG | + | chr1_4:67671252-67671271 | None:intergenic | 45.0% | |
| ATACCCAATTTCGGCCGATA+TGG | - | chr1_4:67671251-67671270 | Msa0179960:intron | 45.0% | |
| TCCGCCATAATCCGATATCA+CGG | - | chr1_4:67671282-67671301 | Msa0179960:intron | 45.0% | |
| TTAGCACTGTTGTCTATGGC+GGG | + | chr1_4:67671360-67671379 | None:intergenic | 45.0% | |
| ! | ATTAGTCACCCCAGCTTTTG+GGG | - | chr1_4:67671714-67671733 | Msa0179960:intron | 45.0% |
| AAGCATTACCCCAAAAGCTG+GGG | + | chr1_4:67671725-67671744 | None:intergenic | 45.0% | |
| CAAGCATTACCCCAAAAGCT+GGG | + | chr1_4:67671726-67671745 | None:intergenic | 45.0% | |
| !! | TTAGCTTGCTTGTTTCCACC+CGG | - | chr1_4:67671783-67671802 | Msa0179960:intron | 45.0% |
| ATGTATCAAAACCTGGCCAG+TGG | + | chr1_4:67671967-67671986 | None:intergenic | 45.0% | |
| GCAGAGACGAACGGAAAATA+TGG | + | chr1_4:67672220-67672239 | None:intergenic | 45.0% | |
| AACTACATGGCAGAGACGAA+CGG | + | chr1_4:67672229-67672248 | None:intergenic | 45.0% | |
| AGCAGAAATTCTTGGGACCT+TGG | - | chr1_4:67672658-67672677 | Msa0179960:intron | 45.0% | |
| TCAAGGTCTCAGGTTCCTAT+GGG | - | chr1_4:67672693-67672712 | Msa0179960:intron | 45.0% | |
| !! | TTCCTATGGGCTAGTCCATA+TGG | - | chr1_4:67672706-67672725 | Msa0179960:intron | 45.0% |
| !! | TTCCATATGGACTAGCCCAT+AGG | + | chr1_4:67672711-67672730 | None:intergenic | 45.0% |
| TCATAGATCGACTAATCCGG+CGG | + | chr1_4:67672785-67672804 | None:intergenic | 45.0% | |
| AAGAAGAGTTACTGTCGCCA+TGG | - | chr1_4:67673018-67673037 | Msa0179960:intron | 45.0% | |
| AGAAGAGTTACTGTCGCCAT+GGG | - | chr1_4:67673019-67673038 | Msa0179960:intron | 45.0% | |
| GCCAACCGCAATTTGGATTA+TGG | - | chr1_4:67673043-67673062 | Msa0179960:intron | 45.0% | |
| TCATCTAGATTTACCACGCG+AGG | - | chr1_4:67673355-67673374 | Msa0179960:intron | 45.0% | |
| TTGTCTCATCATCCAAGCCT+AGG | - | chr1_4:67673378-67673397 | Msa0179960:intron | 45.0% | |
| TGTCTCATCATCCAAGCCTA+GGG | - | chr1_4:67673379-67673398 | Msa0179960:intron | 45.0% | |
| CAATATGCTCCTTCTTCCCT+AGG | + | chr1_4:67673398-67673417 | None:intergenic | 45.0% | |
| ! | CTAGGGAAGAAGGAGCATAT+TGG | - | chr1_4:67673396-67673415 | Msa0179960:intron | 45.0% |
| ! | AGGGAAGAAGGAGCATATTG+GGG | - | chr1_4:67673398-67673417 | Msa0179960:intron | 45.0% |
| ! | AAAGGCAGAGAAGTGTGTCT+GGG | + | chr1_4:67673496-67673515 | None:intergenic | 45.0% |
| ! | AAAAGGCAGAGAAGTGTGTC+TGG | + | chr1_4:67673497-67673516 | None:intergenic | 45.0% |
| GTTCGTGAGTAGGATTACAG+TGG | + | chr1_4:67673546-67673565 | None:intergenic | 45.0% | |
| TACTTGTCAACGTTACAGGG+TGG | - | chr1_4:67673579-67673598 | Msa0179960:intron | 45.0% | |
| AAACATGAGCACCTGAAGGA+TGG | + | chr1_4:67673669-67673688 | None:intergenic | 45.0% | |
| ! | ATTGATTGCCTTTGGCGGAT+TGG | - | chr1_4:67674365-67674384 | Msa0179960:intron | 45.0% |
| CTCTGATTGGCAGTAATCGA+GGG | + | chr1_4:67674471-67674490 | None:intergenic | 45.0% | |
| TCTCTGATTGGCAGTAATCG+AGG | + | chr1_4:67674472-67674491 | None:intergenic | 45.0% | |
| ACAGTGCATGTGCATCAAAC+AGG | + | chr1_4:67674550-67674569 | None:intergenic | 45.0% | |
| GAGTCGAACAATTCGAACAG+AGG | - | chr1_4:67674938-67674957 | Msa0179960:intron | 45.0% | |
| !! | TTGCTCGGCTTATTGGTTCT+TGG | + | chr1_4:67675125-67675144 | None:intergenic | 45.0% |
| ATACTCAACCCAGCATTGCT+CGG | + | chr1_4:67675140-67675159 | None:intergenic | 45.0% | |
| ! | GAGTTTCATCGGTGCTTCTT+TGG | + | chr1_4:67675260-67675279 | None:intergenic | 45.0% |
| !!! | TATTATTTAAAATTAATTCA+TGG | - | chr1_4:67670935-67670954 | Msa0179960:intron | 5.0% |
| !!! | TCATTTTTTTTTTTTTTTTA+GGG | + | chr1_4:67675050-67675069 | None:intergenic | 5.0% |
| !!! | TTCATTTTTTTTTTTTTTTT+AGG | + | chr1_4:67675051-67675070 | None:intergenic | 5.0% |
| !! | ATTATTACATATATATAATT+CGG | + | chr1_4:67675207-67675226 | None:intergenic | 5.0% |
| TGGGGAAGAAGAAGAAGCAG+CGG | - | chr1_4:67669847-67669866 | Msa0179960:three_prime_UTR | 50.0% | |
| GGAACAGCTATGCTGACAGT+GGG | + | chr1_4:67669990-67670009 | None:intergenic | 50.0% | |
| CGAGTAGCGAGTTCAAGAGT+TGG | + | chr1_4:67670035-67670054 | None:intergenic | 50.0% | |
| ! | GCAAATGGTGTGGAGCATCA+AGG | + | chr1_4:67670619-67670638 | None:intergenic | 50.0% |
| CCCACTCATGTTTGCGCAAA+TGG | + | chr1_4:67670634-67670653 | None:intergenic | 50.0% | |
| AACATGAGTGGGGTCCGTAT+CGG | - | chr1_4:67670642-67670661 | Msa0179960:intron | 50.0% | |
| CCTAGTGACAGTGCAATGTG+TGG | + | chr1_4:67671082-67671101 | None:intergenic | 50.0% | |
| CCACACATTGCACTGTCACT+AGG | - | chr1_4:67671079-67671098 | Msa0179960:intron | 50.0% | |
| GTTATCGAATCGGCCATGAC+GGG | - | chr1_4:67671195-67671214 | Msa0179960:intron | 50.0% | |
| GCCGTGATATCGGATTATGG+CGG | + | chr1_4:67671286-67671305 | None:intergenic | 50.0% | |
| ! | GGTGCCGTGATATCGGATTA+TGG | + | chr1_4:67671289-67671308 | None:intergenic | 50.0% |
| !! | CACATGTGGTGCCGTGATAT+CGG | + | chr1_4:67671296-67671315 | None:intergenic | 50.0% |
| !! | TGGTCGGTATGGTGGGATTT+TGG | - | chr1_4:67671314-67671333 | Msa0179960:intron | 50.0% |
| CCAAGCATTACCCCAAAAGC+TGG | + | chr1_4:67671727-67671746 | None:intergenic | 50.0% | |
| !!! | CCAGCTTTTGGGGTAATGCT+TGG | - | chr1_4:67671724-67671743 | Msa0179960:intron | 50.0% |
| AACATCAACTAGCGTTGCCC+CGG | + | chr1_4:67672039-67672058 | None:intergenic | 50.0% | |
| TAGGAACCTGAGACCTTGAG+AGG | + | chr1_4:67672692-67672711 | None:intergenic | 50.0% | |
| CTCAAGGTCTCAGGTTCCTA+TGG | - | chr1_4:67672692-67672711 | Msa0179960:intron | 50.0% | |
| AATCCCACCATCCACTAGCT+GGG | + | chr1_4:67672758-67672777 | None:intergenic | 50.0% | |
| GCGACAGTAACTCTTCTTCC+GGG | + | chr1_4:67673016-67673035 | None:intergenic | 50.0% | |
| GGCGACAGTAACTCTTCTTC+CGG | + | chr1_4:67673017-67673036 | None:intergenic | 50.0% | |
| TCATCCAAGCCTAGGGAAGA+AGG | - | chr1_4:67673386-67673405 | Msa0179960:intron | 50.0% | |
| AAGTGTGTCTGGGAAGTGAG+AGG | + | chr1_4:67673486-67673505 | None:intergenic | 50.0% | |
| ATAGTCGGTACCTCTGAGCA+TGG | - | chr1_4:67673612-67673631 | Msa0179960:intron | 50.0% | |
| CTCATGTGAACTCTTGGGCT+TGG | + | chr1_4:67673916-67673935 | None:intergenic | 50.0% | |
| !! | GTGTAGGTTTGGATTGGCAG+TGG | + | chr1_4:67674597-67674616 | None:intergenic | 50.0% |
| ATTGTTCGACTCCCCTGATG+TGG | + | chr1_4:67674930-67674949 | None:intergenic | 50.0% | |
| ACCAATAAGCCGAGCAATGC+TGG | - | chr1_4:67675128-67675147 | Msa0179960:intron | 50.0% | |
| CCAATAAGCCGAGCAATGCT+GGG | - | chr1_4:67675129-67675148 | Msa0179960:intron | 50.0% | |
| GGGAACAGCTATGCTGACAG+TGG | + | chr1_4:67669991-67670010 | None:intergenic | 55.0% | |
| !! | GAGGTGTCTCAAGGTACTGC+AGG | + | chr1_4:67670429-67670448 | None:intergenic | 55.0% |
| ACATGAGTGGGGTCCGTATC+GGG | - | chr1_4:67670643-67670662 | Msa0179960:intron | 55.0% | |
| ! | GAATCGGCCATGACGGGAAT+CGG | - | chr1_4:67671201-67671220 | Msa0179960:intron | 55.0% |
| TCGGCCGAAATTGGGTATGG+TGG | + | chr1_4:67671249-67671268 | None:intergenic | 55.0% | |
| CCGCCATATCGGCCGAAATT+GGG | + | chr1_4:67671257-67671276 | None:intergenic | 55.0% | |
| CCCAATTTCGGCCGATATGG+CGG | - | chr1_4:67671254-67671273 | Msa0179960:intron | 55.0% | |
| CCAATTTCGGCCGATATGGC+GGG | - | chr1_4:67671255-67671274 | Msa0179960:intron | 55.0% | |
| GGCGGAAAATCCCGCCATAT+CGG | + | chr1_4:67671268-67671287 | None:intergenic | 55.0% | |
| CGATATCACGGCACCACATG+TGG | - | chr1_4:67671294-67671313 | Msa0179960:intron | 55.0% | |
| ATCACGGCACCACATGTGGT+CGG | - | chr1_4:67671298-67671317 | Msa0179960:intron | 55.0% | |
| ACCACATGTGGTCGGTATGG+TGG | - | chr1_4:67671306-67671325 | Msa0179960:intron | 55.0% | |
| CCACATGTGGTCGGTATGGT+GGG | - | chr1_4:67671307-67671326 | Msa0179960:intron | 55.0% | |
| !! | TTGTTTTGCCCCATGGCCAC+TGG | - | chr1_4:67671948-67671967 | Msa0179960:intron | 55.0% |
| AAAACCTGGCCAGTGGCCAT+GGG | + | chr1_4:67671960-67671979 | None:intergenic | 55.0% | |
| ! | GGGGCAACGCTAGTTGATGT+TGG | - | chr1_4:67672038-67672057 | Msa0179960:intron | 55.0% |
| ! | CTTGAGAGGAGCACACTCCA+AGG | + | chr1_4:67672678-67672697 | None:intergenic | 55.0% |
| CTTGGAGTGTGCTCCTCTCA+AGG | - | chr1_4:67672676-67672695 | Msa0179960:intron | 55.0% | |
| TGTGCTCCTCTCAAGGTCTC+AGG | - | chr1_4:67672683-67672702 | Msa0179960:intron | 55.0% | |
| TTAAATGGGCCCCCAGCTAG+TGG | - | chr1_4:67672744-67672763 | Msa0179960:intron | 55.0% | |
| ATCCCACCATCCACTAGCTG+GGG | + | chr1_4:67672757-67672776 | None:intergenic | 55.0% | |
| CAATCCCACCATCCACTAGC+TGG | + | chr1_4:67672759-67672778 | None:intergenic | 55.0% | |
| !! | CAGCTAGTGGATGGTGGGAT+TGG | - | chr1_4:67672757-67672776 | Msa0179960:intron | 55.0% |
| GATGATGAGACAACCTCGCG+TGG | + | chr1_4:67673371-67673390 | None:intergenic | 55.0% | |
| TGCTCCTTCTTCCCTAGGCT+TGG | + | chr1_4:67673393-67673412 | None:intergenic | 55.0% | |
| !! | ATTGCCTTTGGCGGATTGGC+TGG | - | chr1_4:67674369-67674388 | Msa0179960:intron | 55.0% |
| CAAACCAGCCAATCCGCCAA+AGG | + | chr1_4:67674376-67674395 | None:intergenic | 55.0% | |
| !! | CTTTGGCGGATTGGCTGGTT+TGG | - | chr1_4:67674374-67674393 | Msa0179960:intron | 55.0% |
| CCCAGCATTGCTCGGCTTAT+TGG | + | chr1_4:67675132-67675151 | None:intergenic | 55.0% | |
| GAAGAAGCAGCGGCTGACGA+CGG | - | chr1_4:67669857-67669876 | Msa0179960:three_prime_UTR | 60.0% | |
| ! | TGGTGTGGAGCATCAAGGGG+TGG | + | chr1_4:67670614-67670633 | None:intergenic | 60.0% |
| !! | ACTGCCACCGATTCCCGTCA+TGG | + | chr1_4:67671211-67671230 | None:intergenic | 60.0% |
| CCCGCCATATCGGCCGAAAT+TGG | + | chr1_4:67671258-67671277 | None:intergenic | 60.0% | |
| GGCACCACATGTGGTCGGTA+TGG | - | chr1_4:67671303-67671322 | Msa0179960:intron | 60.0% | |
| CCCACCATACCGACCACATG+TGG | + | chr1_4:67671310-67671329 | None:intergenic | 60.0% | |
| !!! | GGGATTTTGGCTCTCCGCCA+TGG | - | chr1_4:67671327-67671346 | Msa0179960:intron | 60.0% |
| !! | CTGTTGTCTATGGCGGGTGG+TGG | + | chr1_4:67671354-67671373 | None:intergenic | 60.0% |
| ! | GCACTGTTGTCTATGGCGGG+TGG | + | chr1_4:67671357-67671376 | None:intergenic | 60.0% |
| AAACCTGGCCAGTGGCCATG+GGG | + | chr1_4:67671959-67671978 | None:intergenic | 60.0% | |
| CAAAACCTGGCCAGTGGCCA+TGG | + | chr1_4:67671961-67671980 | None:intergenic | 60.0% | |
| TCCCACCATCCACTAGCTGG+GGG | + | chr1_4:67672756-67672775 | None:intergenic | 60.0% | |
| !! | GATGGTGGGATTGGTACCGC+CGG | - | chr1_4:67672766-67672785 | Msa0179960:intron | 60.0% |
| CAAATTGCGGTTGGCGCCCA+TGG | + | chr1_4:67673038-67673057 | None:intergenic | 60.0% | |
| CATGGGCGCCAACCGCAATT+TGG | - | chr1_4:67673036-67673055 | Msa0179960:intron | 60.0% | |
| GGGCTTGGCAAGCCGTAGTT+TGG | + | chr1_4:67673901-67673920 | None:intergenic | 60.0% | |
| GAGTGGGGTCCGTATCGGGA+AGG | - | chr1_4:67670647-67670666 | Msa0179960:intron | 65.0% | |
| GGGGTCCGTATCGGGAAGGT+AGG | - | chr1_4:67670651-67670670 | Msa0179960:intron | 65.0% | |
| ! | TCGGCCATGACGGGAATCGG+TGG | - | chr1_4:67671204-67671223 | Msa0179960:intron | 65.0% |
| !! | CTATGGCGGGTGGTGGTCCA+TGG | + | chr1_4:67671347-67671366 | None:intergenic | 65.0% |
| ATGGGCCCCCAGCTAGTGGA+TGG | - | chr1_4:67672748-67672767 | Msa0179960:intron | 65.0% | |
| ! | GCCCCCAGCTAGTGGATGGT+GGG | - | chr1_4:67672752-67672771 | Msa0179960:intron | 65.0% |
| ! | TGGCGGGTGGTGGTCCATGG+CGG | + | chr1_4:67671344-67671363 | None:intergenic | 70.0% |
| TTGCCCCATGGCCACTGGCC+AGG | - | chr1_4:67671953-67671972 | Msa0179960:intron | 70.0% | |
| ! | GGCCCCCAGCTAGTGGATGG+TGG | - | chr1_4:67672751-67672770 | Msa0179960:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 67669807 | 67675478 | 67669807 | ID=Msa0179960;Name=Msa0179960 |
| chr1_4 | mRNA | 67669807 | 67675478 | 67669807 | ID=Msa0179960-mRNA-1;Parent=Msa0179960;Name=Msa0179960-mRNA-1;_AED=0.04;_eAED=0.04;_QI=39|1|1|1|0.5|0.72|11|323|347 |
| chr1_4 | exon | 67669807 | 67670192 | 67669807 | ID=Msa0179960-mRNA-1:exon:22304;Parent=Msa0179960-mRNA-1 |
| chr1_4 | exon | 67670326 | 67670403 | 67670326 | ID=Msa0179960-mRNA-1:exon:22303;Parent=Msa0179960-mRNA-1 |
| chr1_4 | exon | 67670857 | 67670926 | 67670857 | ID=Msa0179960-mRNA-1:exon:22302;Parent=Msa0179960-mRNA-1 |
| chr1_4 | exon | 67671609 | 67671688 | 67671609 | ID=Msa0179960-mRNA-1:exon:22301;Parent=Msa0179960-mRNA-1 |
| chr1_4 | exon | 67671807 | 67671922 | 67671807 | ID=Msa0179960-mRNA-1:exon:22300;Parent=Msa0179960-mRNA-1 |
| chr1_4 | exon | 67672221 | 67672299 | 67672221 | ID=Msa0179960-mRNA-1:exon:22299;Parent=Msa0179960-mRNA-1 |
| chr1_4 | exon | 67673215 | 67673279 | 67673215 | ID=Msa0179960-mRNA-1:exon:22298;Parent=Msa0179960-mRNA-1 |
| chr1_4 | exon | 67674617 | 67674683 | 67674617 | ID=Msa0179960-mRNA-1:exon:22297;Parent=Msa0179960-mRNA-1 |
| chr1_4 | exon | 67674787 | 67674954 | 67674787 | ID=Msa0179960-mRNA-1:exon:22296;Parent=Msa0179960-mRNA-1 |
| chr1_4 | exon | 67675067 | 67675114 | 67675067 | ID=Msa0179960-mRNA-1:exon:22295;Parent=Msa0179960-mRNA-1 |
| chr1_4 | exon | 67675230 | 67675478 | 67675230 | ID=Msa0179960-mRNA-1:exon:22294;Parent=Msa0179960-mRNA-1 |
| chr1_4 | five_prime_UTR | 67675440 | 67675478 | 67675440 | ID=Msa0179960-mRNA-1:five_prime_utr;Parent=Msa0179960-mRNA-1 |
| chr1_4 | CDS | 67675230 | 67675439 | 67675230 | ID=Msa0179960-mRNA-1:cds;Parent=Msa0179960-mRNA-1 |
| chr1_4 | CDS | 67675067 | 67675114 | 67675067 | ID=Msa0179960-mRNA-1:cds;Parent=Msa0179960-mRNA-1 |
| chr1_4 | CDS | 67674787 | 67674954 | 67674787 | ID=Msa0179960-mRNA-1:cds;Parent=Msa0179960-mRNA-1 |
| chr1_4 | CDS | 67674617 | 67674683 | 67674617 | ID=Msa0179960-mRNA-1:cds;Parent=Msa0179960-mRNA-1 |
| chr1_4 | CDS | 67673215 | 67673279 | 67673215 | ID=Msa0179960-mRNA-1:cds;Parent=Msa0179960-mRNA-1 |
| chr1_4 | CDS | 67672221 | 67672299 | 67672221 | ID=Msa0179960-mRNA-1:cds;Parent=Msa0179960-mRNA-1 |
| chr1_4 | CDS | 67671807 | 67671922 | 67671807 | ID=Msa0179960-mRNA-1:cds;Parent=Msa0179960-mRNA-1 |
| chr1_4 | CDS | 67671609 | 67671688 | 67671609 | ID=Msa0179960-mRNA-1:cds;Parent=Msa0179960-mRNA-1 |
| chr1_4 | CDS | 67670857 | 67670926 | 67670857 | ID=Msa0179960-mRNA-1:cds;Parent=Msa0179960-mRNA-1 |
| chr1_4 | CDS | 67670326 | 67670403 | 67670326 | ID=Msa0179960-mRNA-1:cds;Parent=Msa0179960-mRNA-1 |
| chr1_4 | CDS | 67670130 | 67670192 | 67670130 | ID=Msa0179960-mRNA-1:cds;Parent=Msa0179960-mRNA-1 |
| chr1_4 | three_prime_UTR | 67669807 | 67670129 | 67669807 | ID=Msa0179960-mRNA-1:three_prime_utr;Parent=Msa0179960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
