AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0352330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0352330 MtrunA17_Chr3g0087741 92.117 444 9 2 1 419 1 443 0.0 825
Msa0352330 MtrunA17_Chr4g0010781 63.333 450 124 8 1 418 1 441 0.0 518
Msa0352330 MtrunA17_Chr5g0426951 40.608 362 181 6 73 404 69 426 3.31e-80 254
Msa0352330 MtrunA17_Chr3g0123861 37.746 355 171 7 89 402 82 427 4.44e-61 204
Msa0352330 MtrunA17_Chr2g0333221 30.214 374 200 7 78 400 59 422 5.38e-48 171
Msa0352330 MtrunA17_Chr6g0478651 31.842 380 196 10 88 413 67 437 1.20e-45 165
Msa0352330 MtrunA17_Chr4g0010801 44.311 167 29 2 207 309 1 167 1.50e-35 130
Msa0352330 MtrunA17_Chr8g0334811 31.700 347 171 14 90 386 15 345 5.40e-35 134
Msa0352330 MtrunA17_Chr7g0269841 30.000 330 208 6 83 398 20 340 1.39e-30 120
Msa0352330 MtrunA17_Chr4g0010811 63.333 90 30 3 330 417 9 97 3.25e-26 101
Msa0352330 MtrunA17_Chr2g0322181 30.579 363 200 12 80 398 1 355 6.56e-26 108
Msa0352330 MtrunA17_Chr4g0040501 31.454 337 196 16 89 394 4 336 4.21e-25 105
Msa0352330 MtrunA17_Chr2g0282741 27.485 342 198 11 89 394 4 331 1.29e-24 103
Msa0352330 MtrunA17_Chr2g0324921 28.923 325 211 7 89 394 4 327 1.75e-24 103
Msa0352330 MtrunA17_Chr4g0025401 29.060 351 203 11 80 390 1 345 2.98e-24 103
Msa0352330 MtrunA17_Chr4g0006391 29.909 331 204 9 89 394 4 331 4.04e-24 102
Msa0352330 MtrunA17_Chr3g0138471 26.888 331 201 10 89 394 4 318 3.55e-23 99.4
Msa0352330 MtrunA17_Chr2g0282761 27.273 352 194 14 89 395 4 338 1.66e-17 83.2
Msa0352330 MtrunA17_Chr1g0159491 50.000 66 33 0 89 154 6 71 4.82e-17 75.5
Msa0352330 MtrunA17_Chr1g0209551 50.649 77 37 1 83 158 9 85 2.86e-16 80.1
Msa0352330 MtrunA17_Chr5g0393371 41.414 99 52 1 89 187 6 98 3.44e-16 80.1
Msa0352330 MtrunA17_Chr1g0159511 41.414 99 52 2 89 187 6 98 9.56e-16 78.6
Msa0352330 MtrunA17_Chr7g0258061 56.716 67 29 0 88 154 21 87 9.68e-16 77.0
Msa0352330 MtrunA17_Chr7g0263971 59.091 66 26 1 88 152 368 433 1.05e-15 79.0
Msa0352330 MtrunA17_Chr1g0206121 53.333 75 31 3 89 160 35 108 1.22e-15 77.4
Msa0352330 MtrunA17_Chr8g0352451 41.837 98 51 1 90 187 73 164 1.68e-15 77.8
Msa0352330 MtrunA17_Chr5g0414471 34.532 139 82 3 77 214 13 143 7.80e-15 75.9
Msa0352330 MtrunA17_Chr4g0021141 43.210 81 44 1 74 154 9 87 1.09e-13 67.8
Msa0352330 MtrunA17_Chr1g0173931 52.308 65 31 0 90 154 39 103 2.62e-13 70.1
Msa0352330 MtrunA17_Chr7g0271891 48.485 66 30 1 90 151 17 82 1.33e-12 65.5
Msa0352330 MtrunA17_Chr7g0242951 48.529 68 34 1 89 156 27 93 6.12e-12 67.4
Msa0352330 MtrunA17_Chr5g0427221 40.741 81 46 1 71 151 32 110 6.87e-12 63.2
Msa0352330 MtrunA17_Chr7g0253281 46.575 73 35 2 89 158 54 125 8.96e-12 65.9
Msa0352330 MtrunA17_Chr8g0344721 47.126 87 39 2 87 167 8 93 9.41e-12 64.7
Msa0352330 MtrunA17_Chr2g0328581 45.946 74 34 2 78 151 69 136 1.21e-11 63.9
Msa0352330 MtrunA17_Chr6g0460461 43.243 74 37 1 89 157 2 75 1.73e-11 63.5
Msa0352330 MtrunA17_Chr2g0295361 36.842 95 58 2 89 182 39 132 4.73e-11 63.2
Msa0352330 MtrunA17_Chr2g0295821 46.970 66 34 1 89 154 104 168 7.67e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0352330 AT5G48030.1 56.774 465 143 11 1 417 1 455 5.26e-169 482
Msa0352330 AT1G28210.3 36.104 385 201 8 63 404 5 387 5.12e-77 244
Msa0352330 AT1G28210.1 36.104 385 201 8 63 404 5 387 7.78e-77 244
Msa0352330 AT1G28210.2 36.104 385 201 8 63 404 5 387 1.48e-76 244
Msa0352330 AT2G22360.1 37.110 353 171 5 89 400 86 428 1.54e-63 211
Msa0352330 AT4G39960.1 36.288 361 170 7 89 400 85 434 3.94e-60 202
Msa0352330 AT4G39960.2 36.288 361 170 7 89 400 85 434 3.94e-60 202
Msa0352330 AT1G80030.4 31.768 362 188 7 89 400 75 427 1.02e-49 176
Msa0352330 AT1G80030.2 31.768 362 188 7 89 400 75 427 1.18e-49 176
Msa0352330 AT1G80030.3 31.768 362 188 7 89 400 75 427 1.18e-49 176
Msa0352330 AT1G80030.1 31.768 362 188 7 89 400 75 427 1.18e-49 176
Msa0352330 AT3G17830.1 33.708 356 191 7 89 400 63 417 1.83e-49 176
Msa0352330 AT3G62600.1 30.699 329 201 6 88 399 25 343 5.03e-32 124
Msa0352330 AT5G22060.1 28.775 351 199 11 90 398 15 356 3.79e-29 118
Msa0352330 AT1G59725.1 27.660 329 204 9 89 394 4 321 6.01e-26 107
Msa0352330 AT3G44110.1 29.412 357 188 12 90 398 15 355 1.35e-25 108
Msa0352330 AT2G20560.1 29.052 327 210 8 89 394 4 329 2.44e-25 106
Msa0352330 AT1G10350.1 27.326 344 204 10 89 394 4 339 3.59e-25 105
Msa0352330 AT5G01390.1 29.697 330 201 10 89 394 4 326 1.03e-24 104
Msa0352330 AT5G25530.2 26.225 347 203 9 89 398 4 334 1.49e-24 103
Msa0352330 AT3G08910.1 30.675 326 198 9 89 398 4 317 5.37e-24 102
Msa0352330 AT5G01390.2 30.225 311 166 9 89 394 4 268 2.84e-23 99.0
Msa0352330 AT3G44110.2 30.844 308 152 10 90 352 15 306 4.89e-23 99.8
Msa0352330 AT4G28480.2 28.261 322 172 8 89 394 4 282 2.58e-22 96.7
Msa0352330 AT5G25530.1 25.634 355 203 10 89 398 4 342 5.57e-22 96.7
Msa0352330 AT3G47940.1 25.434 346 208 10 89 394 4 339 3.65e-18 85.9
Msa0352330 AT4G39150.3 43.434 99 50 1 89 187 6 98 6.23e-18 85.1
Msa0352330 AT4G39150.1 43.434 99 50 1 89 187 6 98 6.23e-18 85.1
Msa0352330 AT4G39150.2 43.434 99 50 1 89 187 6 98 6.23e-18 85.1
Msa0352330 AT5G06910.1 41.071 112 53 3 90 201 30 128 2.08e-17 82.4
Msa0352330 AT3G12170.2 41.346 104 58 1 64 167 22 122 5.80e-17 81.3
Msa0352330 AT2G21510.5 40.404 99 53 1 89 187 6 98 7.32e-17 81.6
Msa0352330 AT1G59980.2 41.406 128 66 5 91 217 25 144 9.52e-17 81.6
Msa0352330 AT2G21510.2 40.404 99 53 1 89 187 6 98 1.00e-16 81.6
Msa0352330 AT2G21510.4 40.404 99 53 1 89 187 6 98 1.00e-16 81.6
Msa0352330 AT2G21510.3 40.404 99 53 1 89 187 6 98 1.10e-16 81.3
Msa0352330 AT2G21510.1 40.404 99 53 1 89 187 6 98 1.10e-16 81.3
Msa0352330 AT1G59980.1 38.686 137 75 5 91 226 25 153 1.76e-16 81.3
Msa0352330 AT5G01390.3 43.519 108 54 3 89 189 4 111 5.59e-16 77.4
Msa0352330 AT1G76700.1 41.837 98 51 1 89 186 6 97 5.66e-16 79.7
Msa0352330 AT3G12170.1 50.000 80 37 1 88 167 10 86 5.84e-16 77.8
Msa0352330 AT1G21080.3 51.429 70 34 0 89 158 6 75 1.22e-15 78.6
Msa0352330 AT1G21080.1 51.429 70 34 0 89 158 6 75 1.25e-15 78.6
Msa0352330 AT5G01390.4 45.872 109 50 4 89 189 4 111 1.97e-15 75.9
Msa0352330 AT4G28480.1 41.667 108 56 3 89 189 4 111 6.36e-15 75.9
Msa0352330 AT1G68370.1 35.211 142 81 4 76 214 2 135 1.07e-14 75.9
Msa0352330 AT1G77020.1 37.755 98 55 1 90 187 7 98 4.47e-14 73.9
Msa0352330 AT1G24120.1 35.772 123 71 3 86 208 17 131 5.04e-14 73.9
Msa0352330 AT1G71000.2 41.429 70 37 1 86 151 5 74 9.18e-14 69.3
Msa0352330 AT1G56300.2 44.595 74 37 1 82 151 6 79 2.18e-13 67.0
Msa0352330 AT3G08970.1 52.941 68 31 1 89 156 27 93 2.72e-13 72.0
Msa0352330 AT3G08970.2 52.941 68 31 1 89 156 27 93 2.72e-13 72.0
Msa0352330 AT5G03160.1 54.545 66 29 1 88 152 369 434 3.28e-13 71.6
Msa0352330 AT1G56300.1 44.595 74 37 1 82 151 6 79 4.76e-13 67.0
Msa0352330 AT1G71000.1 41.429 70 37 1 86 151 5 74 7.70e-13 66.6
Msa0352330 AT2G33735.1 46.154 65 35 0 88 152 21 85 8.14e-13 65.5
Msa0352330 AT2G33735.2 46.154 65 35 0 88 152 21 85 8.14e-13 65.5
Msa0352330 AT2G41000.2 40.217 92 50 1 89 175 3 94 2.32e-12 66.2
Msa0352330 AT5G16650.1 46.269 67 36 0 88 154 10 76 3.65e-12 63.9
Msa0352330 AT5G05750.1 34.615 104 64 3 88 189 113 214 4.23e-12 67.0
Msa0352330 AT5G49060.2 48.485 66 33 1 89 154 99 163 1.47e-11 65.9
Msa0352330 AT5G49060.1 48.485 66 33 1 89 154 99 163 1.47e-11 65.9
Msa0352330 AT2G41000.1 40.217 92 50 1 89 175 3 94 1.51e-11 63.5
Msa0352330 AT1G61770.1 46.154 65 34 1 87 151 32 95 1.88e-11 65.1
Msa0352330 AT5G16650.2 46.269 67 36 0 88 154 10 76 2.16e-11 62.8
Msa0352330 AT1G79940.2 34.074 135 81 6 27 155 33 165 3.59e-11 65.5
Msa0352330 AT1G79940.3 34.074 135 81 6 27 155 33 165 3.59e-11 65.5
Msa0352330 AT1G79940.1 34.074 135 81 6 27 155 33 165 3.59e-11 65.5
Msa0352330 AT1G79940.4 34.074 135 81 6 27 155 33 165 3.80e-11 65.5
Msa0352330 AT5G18140.1 46.970 66 34 1 88 153 76 140 4.84e-11 64.3

Find 143 sgRNAs with CRISPR-Local

Find 659 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAGCAGCAAATACTTATT+TGG 0.161907 3_1:+21094855 Msa0352330:CDS
TTACAGCGCTTACAGGTTTC+AGG 0.172339 3_1:-21097637 None:intergenic
GTCAGTTAAATTGGATATTA+TGG 0.190985 3_1:+21098482 Msa0352330:CDS
CCCTTTGGAGGCGGTGGCTT+TGG 0.221063 3_1:+21096773 Msa0352330:CDS
AGCAACCAAGTCAGTTAAAT+TGG 0.248112 3_1:+21098473 Msa0352330:CDS
TAATTCTCAATTAATTTATA+AGG 0.249114 3_1:+21103083 Msa0352330:three_prime_UTR
GGAAAAGCTGCTTCGGCTTC+TGG 0.249779 3_1:+21102879 Msa0352330:CDS
TGACAACAATGAAACCATTA+AGG 0.276719 3_1:+21099165 Msa0352330:CDS
ATTCAGGTCCCAACTCTTAC+TGG 0.281089 3_1:+21101927 Msa0352330:CDS
GGAGCAGCAAATACTTATTT+GGG 0.282978 3_1:+21094856 Msa0352330:CDS
ATTTGTTGCGGAGGAGATTA+GGG 0.284043 3_1:-21093743 None:intergenic
TTCTGACCGTGTTGTGTTCC+AGG 0.285979 3_1:-21102058 None:intergenic
ATTGAAGAACTGGGTGCTAT+TGG 0.286647 3_1:+21094834 Msa0352330:CDS
GATGGTGGCTTTGGTCCCTT+TGG 0.298687 3_1:+21096758 Msa0352330:CDS
ATTTGGGGAAGAAGATGATT+AGG 0.310036 3_1:-21093678 None:intergenic
GAAATAAAGAAAGCATACTA+TGG 0.314834 3_1:+21095178 Msa0352330:CDS
AATCGTTCTTCCAAAGTTAC+TGG 0.320508 3_1:+21093924 Msa0352330:CDS
GCCATTGGAGCGAACCATTT+GGG 0.322584 3_1:-21093694 None:intergenic
TACTGGGGATGTTGTTGTTA+AGG 0.326185 3_1:+21101944 Msa0352330:CDS
CAATATGAATCTTCCGATAA+AGG 0.341538 3_1:+21102858 Msa0352330:CDS
GGAACCTTGATAAATTATAT+TGG 0.345465 3_1:+21103227 Msa0352330:three_prime_UTR
GTAAACCGAGAAAATGGTTC+TGG 0.348842 3_1:+21096734 Msa0352330:CDS
CGCCATTGGAGCGAACCATT+TGG 0.350709 3_1:-21093695 None:intergenic
TGACCCTTTACAGCGCTTAC+AGG 0.351457 3_1:-21097644 None:intergenic
GCGGCGGCTTCTTGCCCGAT+TGG 0.351842 3_1:-21102955 None:intergenic
CTCGGTTTACAAAACCTTCA+TGG 0.359083 3_1:-21096721 None:intergenic
GGATATAGGACATTGAATTC+AGG 0.359170 3_1:+21093894 Msa0352330:CDS
GGATCATCTTTGTTTGTGTC+AGG 0.359672 3_1:-21095819 None:intergenic
GATTTGTTGCGGAGGAGATT+AGG 0.361923 3_1:-21093744 None:intergenic
CTGAATGGTTCCGCCCAAAA+TGG 0.371806 3_1:-21101910 None:intergenic
CATATCTGTTTGAAATGTAA+TGG 0.373827 3_1:-21097457 None:intergenic
GGTGGGAGTGGGGTTCCTCC+TGG 0.384899 3_1:+21097607 Msa0352330:intron
AAAATAATTTCCAGTAACTT+TGG 0.386866 3_1:-21093934 None:intergenic
ATGGTGTTAAATTGAAGAAC+TGG 0.387127 3_1:+21094824 Msa0352330:CDS
ATCACCAGGTCGATCTCCTT+CGG 0.389962 3_1:-21099212 None:intergenic
AGAAATTTCAAGAAGTTTCA+AGG 0.402733 3_1:+21095853 Msa0352330:CDS
GAGTGTTACAAAGGGGATAT+AGG 0.403157 3_1:+21093880 Msa0352330:CDS
TTTAACTGACTTGGTTGCTC+TGG 0.411207 3_1:-21098469 None:intergenic
TTGAAGAACTGGGTGCTATT+GGG 0.413042 3_1:+21094835 Msa0352330:CDS
TTTGGGGAAGAAGATGATTA+GGG 0.413985 3_1:-21093677 None:intergenic
GGTTCTGGAGATGGTGGCTT+TGG 0.418459 3_1:+21096749 Msa0352330:CDS
TGAACAATTGCAGGTGGGAG+TGG 0.421996 3_1:+21097595 Msa0352330:intron
ACAATCAATTTGTGGCCAAT+CGG 0.426617 3_1:+21102940 Msa0352330:three_prime_UTR
CAATACAAAGGAGAAGAAAA+AGG 0.426753 3_1:-21093501 None:intergenic
CTTATTTCGCAGGTGCGTCC+TGG 0.427230 3_1:+21102040 Msa0352330:intron
TCACCAGGTCGATCTCCTTC+GGG 0.432930 3_1:-21099211 None:intergenic
CCCCAAATGGTTCGCTCCAA+TGG 0.433535 3_1:+21093693 Msa0352330:exon
TCCACGGACAGCTTCCATAA+AGG 0.438460 3_1:-21097424 None:intergenic
CAATCAATTTGTGGCCAATC+GGG 0.438783 3_1:+21102941 Msa0352330:three_prime_UTR
CGATAAAGGAAAAGCTGCTT+CGG 0.441523 3_1:+21102872 Msa0352330:CDS
TAATCATCTTCTTCCCCAAA+TGG 0.443327 3_1:+21093680 Msa0352330:exon
GAACAATTGCAGGTGGGAGT+GGG 0.444602 3_1:+21097596 Msa0352330:intron
ATGAAATTGGGTTAATCTTG+TGG 0.445773 3_1:-21093465 None:intergenic
TGAAATTGGGTTAATCTTGT+GGG 0.445964 3_1:-21093464 None:intergenic
CAGGTTTCAGGTCTTGTACC+AGG 0.447146 3_1:-21097625 None:intergenic
AGAAGTTTCAAGGGCATATG+AGG 0.447678 3_1:+21095863 Msa0352330:CDS
ACCATTAAGGTTTACAAAAG+TGG 0.448952 3_1:+21099178 Msa0352330:CDS
GGTGGCTTTGGTCCCTTTGG+AGG 0.453256 3_1:+21096761 Msa0352330:CDS
AAGGTTCTAGTGTTTAAGAA+AGG 0.455203 3_1:-21093599 None:intergenic
GGGGCAACTAGATCCATTCA+TGG 0.455696 3_1:+21094877 Msa0352330:CDS
ATTTATACCTGATCCATGAA+TGG 0.455766 3_1:-21094890 None:intergenic
ACTAGATCCATTCATGGATC+AGG 0.467009 3_1:+21094883 Msa0352330:CDS
TGCTCCAATATAATTTATCA+AGG 0.468946 3_1:-21103231 None:intergenic
AAGAAGAAGCTTGACGCCAT+TGG 0.469160 3_1:-21093709 None:intergenic
TAATCGGAACATTGGCGGAC+AGG 0.471543 3_1:+21097292 Msa0352330:CDS
ATTCCCGCTGTCTATCTGTC+AGG 0.476235 3_1:-21102809 None:intergenic
CTCTTTAATCGGAACATTGG+CGG 0.480670 3_1:+21097287 Msa0352330:CDS
TTCAGGTCCCAACTCTTACT+GGG 0.483137 3_1:+21101928 Msa0352330:CDS
GAAACCTGTAAGCGCTGTAA+AGG 0.483461 3_1:+21097640 Msa0352330:CDS
GTTAAATTGGATATTATGGC+TGG 0.484283 3_1:+21098486 Msa0352330:CDS
GGCTTTGGTCCCTTTGGAGG+CGG 0.484799 3_1:+21096764 Msa0352330:CDS
TTTGGTCCCTTTGGAGGCGG+TGG 0.485763 3_1:+21096767 Msa0352330:CDS
AAATAAAGAAAGCATACTAT+GGG 0.491279 3_1:+21095179 Msa0352330:CDS
AAACCTGTAAGCGCTGTAAA+GGG 0.493634 3_1:+21097641 Msa0352330:CDS
AATATCCAATTTAACTGACT+TGG 0.496445 3_1:-21098478 None:intergenic
TAATATTCATTAACATAAAG+AGG 0.497253 3_1:+21103159 Msa0352330:three_prime_UTR
AATCATTTACAATCAATTTG+TGG 0.499198 3_1:+21102932 Msa0352330:three_prime_UTR
CGAGAAAATGGTTCTGGAGA+TGG 0.499609 3_1:+21096740 Msa0352330:CDS
TGTAAGCGCTGTAAAGGGTC+AGG 0.500700 3_1:+21097646 Msa0352330:CDS
GATCCTTCTCTACGGAAGAC+AGG 0.514946 3_1:-21099365 None:intergenic
GAAATTTCAAGAAGTTTCAA+GGG 0.515825 3_1:+21095854 Msa0352330:CDS
ACAGACTAGGATACTGCAAC+AGG 0.519543 3_1:-21103128 None:intergenic
TCCAAAGCCACCGCCTCCAA+AGG 0.520033 3_1:-21096774 None:intergenic
CAACATCCCCAGTAAGAGTT+GGG 0.525837 3_1:-21101935 None:intergenic
TTCTACAAAACTTCAATAGC+AGG 0.534126 3_1:-21102977 None:intergenic
ATATGAAGGAGTGTTACAAA+GGG 0.535315 3_1:+21093872 Msa0352330:CDS
TCCTTTATGGAAGCTGTCCG+TGG 0.536632 3_1:+21097423 Msa0352330:CDS
GGTGAATTTCAGGTATATGA+AGG 0.541850 3_1:+21093858 Msa0352330:intron
CCAAAGCCACCGCCTCCAAA+GGG 0.546016 3_1:-21096773 None:intergenic
GACCTCTTTAATCGGAACAT+TGG 0.548612 3_1:+21097284 Msa0352330:CDS
AAAGCGTCAAGAGTATGATC+AGG 0.550196 3_1:+21096027 Msa0352330:CDS
GATATGTAGGTTGGCCATGA+AGG 0.551132 3_1:+21096707 Msa0352330:intron
TGTTCCGATTAAAGAGGTCA+TGG 0.554621 3_1:-21097280 None:intergenic
TGATCTTTATGTTACTGTCA+AGG 0.555206 3_1:+21099231 Msa0352330:CDS
ACAACATCCCCAGTAAGAGT+TGG 0.560824 3_1:-21101936 None:intergenic
GAGTTTCTGCAAGTCATGCA+AGG 0.561847 3_1:+21098434 Msa0352330:intron
CGCCAATGTTCCGATTAAAG+AGG 0.565093 3_1:-21097286 None:intergenic
GATCCTGTCTTCCGTAGAGA+AGG 0.566629 3_1:+21099362 Msa0352330:CDS
TATATGAAGGAGTGTTACAA+AGG 0.567598 3_1:+21093871 Msa0352330:CDS
AACAATTGCAGGTGGGAGTG+GGG 0.568110 3_1:+21097597 Msa0352330:intron
ATACTGATTGCAGTTGGAGA+TGG 0.568551 3_1:+21094805 Msa0352330:intron
TGATAAATTATATTGGAGCA+TGG 0.568908 3_1:+21103234 Msa0352330:three_prime_UTR
TACATATACTCAAAAGTGGA+GGG 0.570682 3_1:-21103032 None:intergenic
CAAGTCATGCAAGGGTGCAA+AGG 0.570979 3_1:+21098443 Msa0352330:CDS
ATATTACATATACTCAAAAG+TGG 0.584048 3_1:-21103036 None:intergenic
AGTAAGAGTTGGGACCTGAA+TGG 0.587664 3_1:-21101925 None:intergenic
GAAAGTATACAGATTTGTTG+CGG 0.591460 3_1:-21093755 None:intergenic
TGTCTTCCGTAGAGAAGGAT+CGG 0.591949 3_1:+21099367 Msa0352330:CDS
GATATGATTTGCAACACTTG+TGG 0.595840 3_1:+21097474 Msa0352330:CDS
CCATTGGAGCGAACCATTTG+GGG 0.598411 3_1:-21093693 None:intergenic
GAATATCCGATCCTTCTCTA+CGG 0.600340 3_1:-21099373 None:intergenic
TCATAAAAGTCCTTTGCCAA+TGG 0.600767 3_1:-21095121 None:intergenic
TTACATATACTCAAAAGTGG+AGG 0.601000 3_1:-21103033 None:intergenic
GAGCAGCAAATACTTATTTG+GGG 0.607798 3_1:+21094857 Msa0352330:CDS
ATTAAGGTTTACAAAAGTGG+TGG 0.608388 3_1:+21099181 Msa0352330:CDS
AAAACTTCAATAGCAGGCGG+CGG 0.611264 3_1:-21102971 None:intergenic
AAACAAAGATGATCCTGAAG+CGG 0.617397 3_1:+21095827 Msa0352330:CDS
AAGGTGGTTCTGAAACAGAA+AGG 0.617446 3_1:+21102079 Msa0352330:CDS
TTTGTTGCGGAGGAGATTAG+GGG 0.617754 3_1:-21093742 None:intergenic
CATTGGCGGACAGGATGTCA+AGG 0.620017 3_1:+21097301 Msa0352330:CDS
TGGAACACAACACGGTCAGA+AGG 0.622014 3_1:+21102060 Msa0352330:CDS
GAAAATGGTTCTGGAGATGG+TGG 0.624903 3_1:+21096743 Msa0352330:CDS
ACATATACTCAAAAGTGGAG+GGG 0.624993 3_1:-21103031 None:intergenic
AAACCTGACAGATAGACAGC+GGG 0.627667 3_1:+21102806 Msa0352330:CDS
ACATTTGCAGAGTATGCAGT+CGG 0.639216 3_1:+21102908 Msa0352330:three_prime_UTR
AGTATACAGATTTGTTGCGG+AGG 0.639618 3_1:-21093752 None:intergenic
ATACTGCAACAGGTGCATGA+AGG 0.640492 3_1:-21103118 None:intergenic
TATTATATACAACACAGACT+AGG 0.641337 3_1:-21103141 None:intergenic
AGTTTCTGCAAGTCATGCAA+GGG 0.642039 3_1:+21098435 Msa0352330:CDS
TCAGGTCCCAACTCTTACTG+GGG 0.642067 3_1:+21101929 Msa0352330:CDS
GTGCGTCCTGGAACACAACA+CGG 0.643446 3_1:+21102052 Msa0352330:CDS
TACAAAACTTCAATAGCAGG+CGG 0.652302 3_1:-21102974 None:intergenic
ACAGTAACATAAAGATCACC+AGG 0.657451 3_1:-21099226 None:intergenic
AGCAGCAAATACTTATTTGG+GGG 0.661568 3_1:+21094858 Msa0352330:CDS
GCGCTGTAAAGGGTCAGGAG+TGG 0.670919 3_1:+21097651 Msa0352330:CDS
TATGAAGGAGTGTTACAAAG+GGG 0.676481 3_1:+21093873 Msa0352330:CDS
TGGTGTTAAATTGAAGAACT+GGG 0.678693 3_1:+21094825 Msa0352330:CDS
AGTGGTGGTGCAGATCCCGA+AGG 0.680845 3_1:+21099196 Msa0352330:CDS
AACACAACACGGTCAGAAGG+TGG 0.683119 3_1:+21102063 Msa0352330:CDS
GATCCCGAAGGAGATCGACC+TGG 0.690632 3_1:+21099208 Msa0352330:CDS
AATAAAGAAAGCATACTATG+GGG 0.714970 3_1:+21095180 Msa0352330:CDS
GAAACCTGACAGATAGACAG+CGG 0.716980 3_1:+21102805 Msa0352330:intron
GTTTCAGGTCTTGTACCAGG+AGG 0.745812 3_1:-21097622 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTAAATAAATTAAAAA+AGG - chr3_1:21098707-21098726 None:intergenic 0.0%
!!! TTTTAAAGTAATTTTCATTA+TGG + chr3_1:21094419-21094438 Msa0352330:intron 10.0%
!! AATTGATATTCAATAATTTA+GGG - chr3_1:21094483-21094502 None:intergenic 10.0%
!! AAATTGATATTCAATAATTT+AGG - chr3_1:21094484-21094503 None:intergenic 10.0%
!! TATTATTAGTAAACATTATT+AGG + chr3_1:21096125-21096144 Msa0352330:intron 10.0%
!!! ATTTATTTTTTATGTTTAAC+CGG + chr3_1:21096660-21096679 Msa0352330:intron 10.0%
!! ATATTAATTTATATTGTGTT+TGG + chr3_1:21097103-21097122 Msa0352330:intron 10.0%
!!! TATTTTACTTATATATATGT+TGG - chr3_1:21097957-21097976 None:intergenic 10.0%
!! TTTAAATAAATTAAAAAAGG+TGG - chr3_1:21098704-21098723 None:intergenic 10.0%
!! CAATTATTTAAATAGTTAAT+TGG - chr3_1:21099800-21099819 None:intergenic 10.0%
!!! TAAAATAATCTATATTTTCT+TGG + chr3_1:21101875-21101894 Msa0352330:intron 10.0%
!! TAATTCTCAATTAATTTATA+AGG + chr3_1:21103083-21103102 Msa0352330:three_prime_UTR 10.0%
!!! TTTTTATTGATTTTTTTTGG+TGG + chr3_1:21093831-21093850 Msa0352330:intron 15.0%
!!! TCAATTTTAAGTTTTTAACA+AGG - chr3_1:21095316-21095335 None:intergenic 15.0%
!! CATTAAAATAATAATACAAG+AGG - chr3_1:21095581-21095600 None:intergenic 15.0%
!! TAATGTTTACTAATAATAGT+AGG - chr3_1:21096123-21096142 None:intergenic 15.0%
!!! CATCTATATTTTATGAATTA+AGG + chr3_1:21097503-21097522 Msa0352330:intron 15.0%
!!! AAGGTTAAATTTTAATTTCA+AGG - chr3_1:21097692-21097711 None:intergenic 15.0%
!!! TAACTTTTTTGTTAATTTGA+TGG + chr3_1:21097742-21097761 Msa0352330:intron 15.0%
!! TTGATTAAAATTTAGAGATA+CGG + chr3_1:21097903-21097922 Msa0352330:intron 15.0%
!! TATAAGTAAAATAGAGTTTA+TGG + chr3_1:21097964-21097983 Msa0352330:intron 15.0%
!! TATCTATTATTATGATTTCA+GGG - chr3_1:21098294-21098313 None:intergenic 15.0%
!! TTATCTATTATTATGATTTC+AGG - chr3_1:21098295-21098314 None:intergenic 15.0%
!! TCATAATAATAGATAATGAT+AGG + chr3_1:21098299-21098318 Msa0352330:intron 15.0%
!! TTTCTAATCTTTCAAAAAAA+AGG + chr3_1:21098888-21098907 Msa0352330:intron 15.0%
!! AAAAATCAAATTCTGAATTA+TGG - chr3_1:21098941-21098960 None:intergenic 15.0%
!!! ATATTAATAATTGTCTTGTT+TGG - chr3_1:21098992-21099011 None:intergenic 15.0%
!!! ACATATTTTTATACATTTGA+AGG + chr3_1:21099139-21099158 Msa0352330:intron 15.0%
!!! CATATTTTTATACATTTGAA+GGG + chr3_1:21099140-21099159 Msa0352330:intron 15.0%
!!! TTAATCTTTTCATAATTTTG+AGG + chr3_1:21099262-21099281 Msa0352330:intron 15.0%
!!! AACTTTCTTTTTTCTTTTTT+GGG + chr3_1:21099500-21099519 Msa0352330:intron 15.0%
!! GATTATAACTTATAAGTAAT+AGG - chr3_1:21100336-21100355 None:intergenic 15.0%
!!! GGTTTTTTTATATTTTAGAA+CGG + chr3_1:21100953-21100972 Msa0352330:intron 15.0%
!! AAAAAAGTGATAAGTTTATT+TGG - chr3_1:21101055-21101074 None:intergenic 15.0%
!! AAATCCAAAAAAAATAAACT+TGG + chr3_1:21101103-21101122 Msa0352330:intron 15.0%
!!! TATAACAGTTTCTTAATTTT+TGG + chr3_1:21101130-21101149 Msa0352330:intron 15.0%
!!! ATAACAGTTTCTTAATTTTT+GGG + chr3_1:21101131-21101150 Msa0352330:intron 15.0%
!! TAATATTCATTAACATAAAG+AGG + chr3_1:21103159-21103178 Msa0352330:three_prime_UTR 15.0%
!! GTCTGAAAAAATATGAAATT+GGG - chr3_1:21093480-21093499 None:intergenic 20.0%
!! TGTCTGAAAAAATATGAAAT+TGG - chr3_1:21093481-21093500 None:intergenic 20.0%
!! TTTCACTCTTCAAAAAAATT+AGG + chr3_1:21093624-21093643 Msa0352330:intron 20.0%
!! TTCACTCTTCAAAAAAATTA+GGG + chr3_1:21093625-21093644 Msa0352330:intron 20.0%
!!! AAATTAGGGTTTTTCAATTT+AGG + chr3_1:21093639-21093658 Msa0352330:five_prime_UTR 20.0%
!!! AATTAGGGTTTTTCAATTTA+GGG + chr3_1:21093640-21093659 Msa0352330:five_prime_UTR 20.0%
!! AAAATAATTTCCAGTAACTT+TGG - chr3_1:21093937-21093956 None:intergenic 20.0%
!!! GGTTAAAAAAGTGATTATTT+TGG - chr3_1:21094095-21094114 None:intergenic 20.0%
!!! ACTTCTAAAAGTGATTATTT+TGG - chr3_1:21094116-21094135 None:intergenic 20.0%
!!! TTTAGAAGTTTTGAAATTGA+TGG + chr3_1:21094137-21094156 Msa0352330:intron 20.0%
!!! TTAATTGACTTGATTGTTAT+TGG + chr3_1:21094196-21094215 Msa0352330:intron 20.0%
!!! AAAGTGATTATTTTATCACA+AGG - chr3_1:21094287-21094306 None:intergenic 20.0%
!!! TTTTATAATCTGTAACAAAC+AGG + chr3_1:21094509-21094528 Msa0352330:intron 20.0%
!!! TCATTTTCTCAAATTATCAT+CGG - chr3_1:21094583-21094602 None:intergenic 20.0%
!!! TGTCCATTATTATTTTGATT+TGG + chr3_1:21094975-21094994 Msa0352330:intron 20.0%
!! TCACCAAATCAAAATAATAA+TGG - chr3_1:21094981-21095000 None:intergenic 20.0%
!!! AAATAAAGAAAGCATACTAT+GGG + chr3_1:21095179-21095198 Msa0352330:CDS 20.0%
!!! TCTTAGGTCAAATATTTTTT+AGG + chr3_1:21095238-21095257 Msa0352330:intron 20.0%
!!! CTTAGGTCAAATATTTTTTA+GGG + chr3_1:21095239-21095258 Msa0352330:intron 20.0%
!!! TTAGGTCAAATATTTTTTAG+GGG + chr3_1:21095240-21095259 Msa0352330:intron 20.0%
!!! TTATTTCTAATTTCATATGC+TGG + chr3_1:21095365-21095384 Msa0352330:intron 20.0%
!!! TATTTCTAATTTCATATGCT+GGG + chr3_1:21095366-21095385 Msa0352330:intron 20.0%
!! TTTAATGCAAATAGAAAACA+TGG - chr3_1:21095509-21095528 None:intergenic 20.0%
!! TTTCTTTCTTTCTTCATATA+TGG + chr3_1:21095692-21095711 Msa0352330:intron 20.0%
!! AATGCAATTACATAAAGAAT+GGG - chr3_1:21095986-21096005 None:intergenic 20.0%
!!! TAGGCAGTTATTATTTTATT+AGG + chr3_1:21096144-21096163 Msa0352330:intron 20.0%
!! GAAAATAAGAACATAAGTAA+AGG + chr3_1:21096511-21096530 Msa0352330:intron 20.0%
!!! CATATATCTCTACAAATTTT+AGG - chr3_1:21096567-21096586 None:intergenic 20.0%
!! ATATATGAGAGAAAAAAGTA+GGG + chr3_1:21096580-21096599 Msa0352330:intron 20.0%
!!! AGATTTCTTTCCTTTTTATT+AGG + chr3_1:21096856-21096875 Msa0352330:intron 20.0%
!! ATTGTAGTATAAATTTCATC+AGG + chr3_1:21096888-21096907 Msa0352330:intron 20.0%
!!! AAATTAATATGCCTTTTACT+GGG - chr3_1:21097093-21097112 None:intergenic 20.0%
!!! TAAATTAATATGCCTTTTAC+TGG - chr3_1:21097094-21097113 None:intergenic 20.0%
!!! GTTTTTATTTCTATTTGGAT+TGG + chr3_1:21097327-21097346 Msa0352330:intron 20.0%
!! AACATTAACATTGTTAAAGA+AGG - chr3_1:21097711-21097730 None:intergenic 20.0%
!! AACAAACAGATTCTTATATA+AGG + chr3_1:21098003-21098022 Msa0352330:intron 20.0%
!! TTCTTATATAAGGTGAAAAT+TGG + chr3_1:21098013-21098032 Msa0352330:intron 20.0%
!!! TTTGCTTCTTATTATTTTTC+TGG + chr3_1:21098402-21098421 Msa0352330:intron 20.0%
!! AAATAAATTAAAAAAGGTGG+TGG - chr3_1:21098701-21098720 None:intergenic 20.0%
!! ACACAATACATAATATGAAA+AGG - chr3_1:21099018-21099037 None:intergenic 20.0%
!! ATTATGTATTGTGTTCAATT+AGG + chr3_1:21099024-21099043 Msa0352330:intron 20.0%
!! AATCAAGAATTTCTTCATTA+AGG - chr3_1:21099436-21099455 None:intergenic 20.0%
!! CAAAAAAGAAAAAAGAAAGT+TGG - chr3_1:21099501-21099520 None:intergenic 20.0%
!!! CAACTTTCTTTTTTCTTTTT+TGG + chr3_1:21099499-21099518 Msa0352330:intron 20.0%
!!! ACTTTCTTTTTTCTTTTTTG+GGG + chr3_1:21099501-21099520 Msa0352330:intron 20.0%
!! AAAAAAAATATAACTGTCTC+TGG - chr3_1:21099665-21099684 None:intergenic 20.0%
!! ATAACTTATAAGTAATAGGA+AGG - chr3_1:21100332-21100351 None:intergenic 20.0%
!! GTTAGTTAAATAAGTTACTT+AGG - chr3_1:21100386-21100405 None:intergenic 20.0%
!!! TTTTGAAGTTAAAACGTTTA+TGG - chr3_1:21100566-21100585 None:intergenic 20.0%
!! TTCATAAACATTACTGAAAA+TGG + chr3_1:21100932-21100951 Msa0352330:intron 20.0%
!!! ATTGCCAAGTTTATTTTTTT+TGG - chr3_1:21101110-21101129 None:intergenic 20.0%
!!! TAACAGTTTCTTAATTTTTG+GGG + chr3_1:21101132-21101151 Msa0352330:intron 20.0%
!! CATATTGTGGAATTATTTAA+GGG - chr3_1:21101271-21101290 None:intergenic 20.0%
!! TCATATTGTGGAATTATTTA+AGG - chr3_1:21101272-21101291 None:intergenic 20.0%
!!! TAAGTCTTATAAATTAGAAC+TGG + chr3_1:21101328-21101347 Msa0352330:intron 20.0%
!!! TTTCATTGATTAAACAGATT+CGG - chr3_1:21101617-21101636 None:intergenic 20.0%
!!! GATTATTTTAAGTGATGTTT+AGG - chr3_1:21101865-21101884 None:intergenic 20.0%
!! TAACTGATGAAAGTTTAAAT+GGG + chr3_1:21102013-21102032 Msa0352330:intron 20.0%
!! ATTGTTTATGGATGATAATT+TGG + chr3_1:21102115-21102134 Msa0352330:intron 20.0%
!! TTGTTTATGGATGATAATTT+GGG + chr3_1:21102116-21102135 Msa0352330:intron 20.0%
!! TTTAACAAAATGCTTTACTT+CGG - chr3_1:21102469-21102488 None:intergenic 20.0%
!!! AATAATTTTTCGTTTCTGAA+GGG - chr3_1:21102582-21102601 None:intergenic 20.0%
!!! AAATAATTTTTCGTTTCTGA+AGG - chr3_1:21102583-21102602 None:intergenic 20.0%
!! AATCATTTACAATCAATTTG+TGG + chr3_1:21102932-21102951 Msa0352330:three_prime_UTR 20.0%
!! ATATTACATATACTCAAAAG+TGG - chr3_1:21103039-21103058 None:intergenic 20.0%
!!! TTTTGTTTGTAGCAATACAA+AGG - chr3_1:21093516-21093535 None:intergenic 25.0%
!!! TTACGCTTTTTGAGAAATTT+TGG + chr3_1:21093794-21093813 Msa0352330:intron 25.0%
!! ACTGGAAATTATTTTCACAA+TGG + chr3_1:21093942-21093961 Msa0352330:CDS 25.0%
!!! ATATATGTTTTTTTCCATGC+TGG + chr3_1:21093986-21094005 Msa0352330:intron 25.0%
! ATCAAGTCAATTAAATCAGA+GGG - chr3_1:21094190-21094209 None:intergenic 25.0%
! AATCAAGTCAATTAAATCAG+AGG - chr3_1:21094191-21094210 None:intergenic 25.0%
!!! ATGTCTTTTTTTCATAGCTA+AGG - chr3_1:21094535-21094554 None:intergenic 25.0%
! ATATAGTGAAAGAAAAGACT+CGG - chr3_1:21094721-21094740 None:intergenic 25.0%
! AATATTAGCAACAACATTAG+CGG - chr3_1:21094775-21094794 None:intergenic 25.0%
! TAACAAAATCAAGAACGAAA+TGG - chr3_1:21094941-21094960 None:intergenic 25.0%
!! GAAATAAAGAAAGCATACTA+TGG + chr3_1:21095178-21095197 Msa0352330:CDS 25.0%
!! AATAAAGAAAGCATACTATG+GGG + chr3_1:21095180-21095199 Msa0352330:CDS 25.0%
! ACCTAAGAATAGATGTATAT+TGG - chr3_1:21095226-21095245 None:intergenic 25.0%
!! AGAAAATGCAAAGTTTTACA+AGG - chr3_1:21095284-21095303 None:intergenic 25.0%
!!! ATACTTGTGTTATTTTCAAG+TGG + chr3_1:21095414-21095433 Msa0352330:intron 25.0%
!! CTGATATATTCGCAATTTTT+AGG - chr3_1:21095628-21095647 None:intergenic 25.0%
! AGAAATTTCAAGAAGTTTCA+AGG + chr3_1:21095853-21095872 Msa0352330:CDS 25.0%
! GAAATTTCAAGAAGTTTCAA+GGG + chr3_1:21095854-21095873 Msa0352330:CDS 25.0%
! TTGTTCTTGATACTATTTAG+TGG + chr3_1:21095902-21095921 Msa0352330:intron 25.0%
! ATGCAATTACATAAAGAATG+GGG - chr3_1:21095985-21096004 None:intergenic 25.0%
! CAATGCAATTACATAAAGAA+TGG - chr3_1:21095987-21096006 None:intergenic 25.0%
! TCTTTATGTAATTGCATTGT+AGG + chr3_1:21095988-21096007 Msa0352330:intron 25.0%
! TAGATAAGTAGGAAATCTAA+AGG + chr3_1:21096235-21096254 Msa0352330:intron 25.0%
! AAGTAAAGGACATTTGTTTA+TGG + chr3_1:21096525-21096544 Msa0352330:intron 25.0%
! GATATATGAGAGAAAAAAGT+AGG + chr3_1:21096579-21096598 Msa0352330:intron 25.0%
!! AATTAATATGCCTTTTACTG+GGG - chr3_1:21097092-21097111 None:intergenic 25.0%
! TTCAATGGAATGTATAACAA+GGG - chr3_1:21097198-21097217 None:intergenic 25.0%
!! ATATACATTCTAGTCTTCAA+TGG - chr3_1:21097213-21097232 None:intergenic 25.0%
!!! GGTTCGTTTTTATTTCTATT+TGG + chr3_1:21097322-21097341 Msa0352330:intron 25.0%
!! TTTTGTTGAACTTTCCTTTA+TGG + chr3_1:21097410-21097429 Msa0352330:CDS 25.0%
!! CATATCTGTTTGAAATGTAA+TGG - chr3_1:21097460-21097479 None:intergenic 25.0%
! ATGGCTATGTTATATATATC+CGG + chr3_1:21097761-21097780 Msa0352330:intron 25.0%
! TACTTAAAACATGTGATTTG+CGG - chr3_1:21098062-21098081 None:intergenic 25.0%
!!! CAACTATAGTATTGATTCTA+TGG + chr3_1:21098125-21098144 Msa0352330:intron 25.0%
! AATATCCAATTTAACTGACT+TGG - chr3_1:21098481-21098500 None:intergenic 25.0%
! GTCAGTTAAATTGGATATTA+TGG + chr3_1:21098482-21098501 Msa0352330:CDS 25.0%
!!! TTTTATTTAGTCTGAAAAGC+AGG - chr3_1:21098806-21098825 None:intergenic 25.0%
! TAATTTGACTCCATCAATTA+TGG + chr3_1:21098964-21098983 Msa0352330:intron 25.0%
!! GTTATGAGTTTAATGAGTTT+TGG + chr3_1:21099048-21099067 Msa0352330:intron 25.0%
!!! TATGAAGTAATATGTCGTTT+TGG + chr3_1:21099872-21099891 Msa0352330:intron 25.0%
!!! ATGAAGTAATATGTCGTTTT+GGG + chr3_1:21099873-21099892 Msa0352330:intron 25.0%
! GAATATCATTGGAATTGAAA+GGG + chr3_1:21100133-21100152 Msa0352330:intron 25.0%
!! AGTATCAAACTTTTATTCTC+AGG + chr3_1:21100980-21100999 Msa0352330:intron 25.0%
! CATCATTCAATTCTTCAATT+TGG - chr3_1:21101223-21101242 None:intergenic 25.0%
! AATTTGTGAATTTGAGAGTT+TGG + chr3_1:21101402-21101421 Msa0352330:intron 25.0%
!!! TTATTTTGATGTGTAGTGAT+TGG + chr3_1:21101764-21101783 Msa0352330:intron 25.0%
!!! TATTTTCTTGGTCTTTTTTC+AGG + chr3_1:21101887-21101906 Msa0352330:intron 25.0%
!! GTATAAGTTTTACCACATTT+TGG + chr3_1:21101984-21102003 Msa0352330:intron 25.0%
! GTAACTGATGAAAGTTTAAA+TGG + chr3_1:21102012-21102031 Msa0352330:intron 25.0%
! AACTGATGAAAGTTTAAATG+GGG + chr3_1:21102014-21102033 Msa0352330:intron 25.0%
!! ACCAAAAAGTATAACTCATT+AGG + chr3_1:21102219-21102238 Msa0352330:CDS 25.0%
! TTTGATGTCATTATTCAATG+TGG + chr3_1:21102290-21102309 Msa0352330:intron 25.0%
! AACTAATTGAAAACCATTTC+TGG + chr3_1:21102405-21102424 Msa0352330:intron 25.0%
! TATTTCATGTGCATTTGTAT+CGG - chr3_1:21102705-21102724 None:intergenic 25.0%
! TATTATATACAACACAGACT+AGG - chr3_1:21103144-21103163 None:intergenic 25.0%
!!! CTTTTTGCTTTTATCATAAG+TGG + chr3_1:21103203-21103222 Msa0352330:three_prime_UTR 25.0%
! GGAACCTTGATAAATTATAT+TGG + chr3_1:21103227-21103246 Msa0352330:three_prime_UTR 25.0%
! TGCTCCAATATAATTTATCA+AGG - chr3_1:21103234-21103253 None:intergenic 25.0%
! TGATAAATTATATTGGAGCA+TGG + chr3_1:21103234-21103253 Msa0352330:three_prime_UTR 25.0%
TGAAATTGGGTTAATCTTGT+GGG - chr3_1:21093467-21093486 None:intergenic 30.0%
ATGAAATTGGGTTAATCTTG+TGG - chr3_1:21093468-21093487 None:intergenic 30.0%
CAATACAAAGGAGAAGAAAA+AGG - chr3_1:21093504-21093523 None:intergenic 30.0%
! AAGGTTCTAGTGTTTAAGAA+AGG - chr3_1:21093602-21093621 None:intergenic 30.0%
!!! TTTTTTGAAGAGTGAAACGA+AGG - chr3_1:21093621-21093640 None:intergenic 30.0%
!! GAAAGTATACAGATTTGTTG+CGG - chr3_1:21093758-21093777 None:intergenic 30.0%
!! TATATGAAGGAGTGTTACAA+AGG + chr3_1:21093871-21093890 Msa0352330:CDS 30.0%
!! ATATGAAGGAGTGTTACAAA+GGG + chr3_1:21093872-21093891 Msa0352330:CDS 30.0%
ACAATGGTATGTGATGAAAT+AGG + chr3_1:21093958-21093977 Msa0352330:intron 30.0%
!! TGATTTGGCCATTTTAACAA+TGG + chr3_1:21094015-21094034 Msa0352330:intron 30.0%
!! CATTTTAACAATGGATGAGT+GGG + chr3_1:21094024-21094043 Msa0352330:intron 30.0%
TCAAGTCAATTAAATCAGAG+GGG - chr3_1:21094189-21094208 None:intergenic 30.0%
TATAGTGAAAGAAAAGACTC+GGG - chr3_1:21094720-21094739 None:intergenic 30.0%
! ATGGTGTTAAATTGAAGAAC+TGG + chr3_1:21094824-21094843 Msa0352330:CDS 30.0%
! TGGTGTTAAATTGAAGAACT+GGG + chr3_1:21094825-21094844 Msa0352330:CDS 30.0%
ATTTATACCTGATCCATGAA+TGG - chr3_1:21094893-21094912 None:intergenic 30.0%
AAAAAGTCAGTGACATGTAA+TGG - chr3_1:21095076-21095095 None:intergenic 30.0%
! AAGGACTTTTATGATGTTCT+TGG + chr3_1:21095130-21095149 Msa0352330:CDS 30.0%
GCCAATATACATCTATTCTT+AGG + chr3_1:21095222-21095241 Msa0352330:intron 30.0%
ATAATAGTCTAAATTGCACG+AGG + chr3_1:21095447-21095466 Msa0352330:intron 30.0%
ATACAAGAGGACTTATATTC+TGG - chr3_1:21095568-21095587 None:intergenic 30.0%
AAGAAGGAAGGAAAAATTTG+AGG - chr3_1:21095654-21095673 None:intergenic 30.0%
AAGAGAGAAAGAAAGAAAGA+AGG - chr3_1:21095670-21095689 None:intergenic 30.0%
!! ATCAAGAACAAGAGCATTAA+GGG - chr3_1:21095893-21095912 None:intergenic 30.0%
!! TATCAAGAACAAGAGCATTA+AGG - chr3_1:21095894-21095913 None:intergenic 30.0%
!! ATGATTTGTGAACTGACTTT+TGG + chr3_1:21095943-21095962 Msa0352330:intron 30.0%
!! AATTGCATTGTAGGTTTTGA+AGG + chr3_1:21095997-21096016 Msa0352330:intron 30.0%
! CTTTCCAGTAATTTTCTCTT+TGG + chr3_1:21096058-21096077 Msa0352330:intron 30.0%
TTGACCAAAGAGAAAATTAC+TGG - chr3_1:21096065-21096084 None:intergenic 30.0%
ACTATGTTGAGGTAAATAGA+AGG + chr3_1:21096411-21096430 Msa0352330:intron 30.0%
GTAACAAATAAGCACATAGT+TGG + chr3_1:21096480-21096499 Msa0352330:intron 30.0%
GACATTTGTTTATGGAGATT+GGG + chr3_1:21096533-21096552 Msa0352330:intron 30.0%
ACATTTGTTTATGGAGATTG+GGG + chr3_1:21096534-21096553 Msa0352330:intron 30.0%
! AAAAAAGTAGGGAATGGATT+GGG + chr3_1:21096591-21096610 Msa0352330:intron 30.0%
GGAACTAATTTAGATGAAAC+CGG - chr3_1:21096682-21096701 None:intergenic 30.0%
TCATCTAAATTAGTTCCACA+TGG + chr3_1:21096685-21096704 Msa0352330:intron 30.0%
! TTAATCCTGTAATAACTTGC+CGG + chr3_1:21096798-21096817 Msa0352330:intron 30.0%
GATATAAAAGTTGAAGAGAC+CGG - chr3_1:21096820-21096839 None:intergenic 30.0%
ATTTATACTACAATGCAGAC+TGG - chr3_1:21096882-21096901 None:intergenic 30.0%
AAATGCTTGAGTCTTAAACA+TGG - chr3_1:21097051-21097070 None:intergenic 30.0%
!!! ATCTTTTTTTCCCCAGTAAA+AGG + chr3_1:21097079-21097098 Msa0352330:intron 30.0%
CTTCAATGGAATGTATAACA+AGG - chr3_1:21097199-21097218 None:intergenic 30.0%
! TTTTCCATGACCTCTTTAAT+CGG + chr3_1:21097276-21097295 Msa0352330:CDS 30.0%
! GTATGTTAAGGATTTGTTTG+AGG + chr3_1:21097360-21097379 Msa0352330:intron 30.0%
!! CTATAGTATTGATTCTATGG+AGG + chr3_1:21098128-21098147 Msa0352330:intron 30.0%
!! TCTATGGAGGAATGTTTTAA+TGG + chr3_1:21098141-21098160 Msa0352330:intron 30.0%
! ACTTTTATTGCGCAAATGTA+AGG + chr3_1:21098203-21098222 Msa0352330:intron 30.0%
GTTAAATTGGATATTATGGC+TGG + chr3_1:21098486-21098505 Msa0352330:CDS 30.0%
!! CTTTGCTATTATGTGACATA+TGG + chr3_1:21098541-21098560 Msa0352330:intron 30.0%
!! AATTAAAAAAGGTGGTGGAT+TGG - chr3_1:21098696-21098715 None:intergenic 30.0%
TGACAACAATGAAACCATTA+AGG + chr3_1:21099165-21099184 Msa0352330:CDS 30.0%
ACCATTAAGGTTTACAAAAG+TGG + chr3_1:21099178-21099197 Msa0352330:CDS 30.0%
!! ACCACTTTTGTAAACCTTAA+TGG - chr3_1:21099182-21099201 None:intergenic 30.0%
ATTAAGGTTTACAAAAGTGG+TGG + chr3_1:21099181-21099200 Msa0352330:CDS 30.0%
TGATCTTTATGTTACTGTCA+AGG + chr3_1:21099231-21099250 Msa0352330:CDS 30.0%
GAGGAGATACAAAAGAAAAA+GGG - chr3_1:21099294-21099313 None:intergenic 30.0%
TGAGGAGATACAAAAGAAAA+AGG - chr3_1:21099295-21099314 None:intergenic 30.0%
AAAGGACGAAAAAATGATTG+AGG - chr3_1:21099321-21099340 None:intergenic 30.0%
TTCTAAACCCAAATGATCTT+GGG - chr3_1:21099599-21099618 None:intergenic 30.0%
TTTCTAAACCCAAATGATCT+TGG - chr3_1:21099600-21099619 None:intergenic 30.0%
AAAATATAACTGTCTCTGGT+GGG - chr3_1:21099661-21099680 None:intergenic 30.0%
AAAAATATAACTGTCTCTGG+TGG - chr3_1:21099662-21099681 None:intergenic 30.0%
TTTGGAGATTTCAGTGATAA+TGG + chr3_1:21100111-21100130 Msa0352330:intron 30.0%
!! CAGTGATAATGGAATATCAT+TGG + chr3_1:21100122-21100141 Msa0352330:intron 30.0%
GGAATATCATTGGAATTGAA+AGG + chr3_1:21100132-21100151 Msa0352330:intron 30.0%
CTAAGAATAGGAAGAATGTA+TGG + chr3_1:21100256-21100275 Msa0352330:intron 30.0%
TGGAAAGAATTTAAATTCCC+TGG + chr3_1:21100276-21100295 Msa0352330:intron 30.0%
ATAAGTAATAGGAAGGAGAA+AGG - chr3_1:21100325-21100344 None:intergenic 30.0%
! TAGAGTTAACCACAGTTTTT+AGG + chr3_1:21100440-21100459 Msa0352330:intron 30.0%
TGAAGTTAAAACGTTTATGG+TGG - chr3_1:21100563-21100582 None:intergenic 30.0%
AGGAGAGTCATTAAAATAGT+GGG - chr3_1:21100609-21100628 None:intergenic 30.0%
!!! GGTTTTCATCTTAATTTGCT+AGG + chr3_1:21101001-21101020 Msa0352330:intron 30.0%
CTAGGCATAATGTAATTTCA+AGG + chr3_1:21101019-21101038 Msa0352330:intron 30.0%
TTGGTCAATGATTCATATTG+TGG - chr3_1:21101284-21101303 None:intergenic 30.0%
AACTCAGAATCAGTTTAGTT+AGG + chr3_1:21101440-21101459 Msa0352330:intron 30.0%
!! GAATTCTCTCTGAAATTTAC+AGG + chr3_1:21101675-21101694 Msa0352330:intron 30.0%
! GTAGTTTGAAATTTCCTGAA+TGG + chr3_1:21101697-21101716 Msa0352330:intron 30.0%
!! GAGCAAGTTGATATTGTTTA+TGG + chr3_1:21102103-21102122 Msa0352330:intron 30.0%
! TAATTTGGGAGACATTTTGA+AGG + chr3_1:21102130-21102149 Msa0352330:intron 30.0%
! GCCTAATGAGTTATACTTTT+TGG - chr3_1:21102223-21102242 None:intergenic 30.0%
! TAATTGAAAACCATTTCTGG+AGG + chr3_1:21102408-21102427 Msa0352330:intron 30.0%
TTTAATGTTGTGCATTCTGA+TGG + chr3_1:21102551-21102570 Msa0352330:intron 30.0%
! AAAACTTTTACATGTTCCGA+CGG - chr3_1:21102666-21102685 None:intergenic 30.0%
!! GGAACATGTAAAAGTTTTGA+GGG + chr3_1:21102668-21102687 Msa0352330:intron 30.0%
!!! GAACATGTAAAAGTTTTGAG+GGG + chr3_1:21102669-21102688 Msa0352330:intron 30.0%
!!! AACATGTAAAAGTTTTGAGG+GGG + chr3_1:21102670-21102689 Msa0352330:intron 30.0%
CAATATGAATCTTCCGATAA+AGG + chr3_1:21102858-21102877 Msa0352330:CDS 30.0%
TTCTACAAAACTTCAATAGC+AGG - chr3_1:21102980-21102999 None:intergenic 30.0%
TACATATACTCAAAAGTGGA+GGG - chr3_1:21103035-21103054 None:intergenic 30.0%
TTACATATACTCAAAAGTGG+AGG - chr3_1:21103036-21103055 None:intergenic 30.0%
!! TTTGCTTTTATCATAAGTGG+AGG + chr3_1:21103206-21103225 Msa0352330:three_prime_UTR 30.0%
TTTGGGGAAGAAGATGATTA+GGG - chr3_1:21093680-21093699 None:intergenic 35.0%
ATTTGGGGAAGAAGATGATT+AGG - chr3_1:21093681-21093700 None:intergenic 35.0%
TAATCATCTTCTTCCCCAAA+TGG + chr3_1:21093680-21093699 Msa0352330:exon 35.0%
!! CGCTTTTTGAGAAATTTTGG+TGG + chr3_1:21093797-21093816 Msa0352330:intron 35.0%
!!! TTGATTTTTTTTGGTGGTGC+TGG + chr3_1:21093837-21093856 Msa0352330:intron 35.0%
! GGTGAATTTCAGGTATATGA+AGG + chr3_1:21093858-21093877 Msa0352330:intron 35.0%
!! TATGAAGGAGTGTTACAAAG+GGG + chr3_1:21093873-21093892 Msa0352330:CDS 35.0%
GGATATAGGACATTGAATTC+AGG + chr3_1:21093894-21093913 Msa0352330:CDS 35.0%
AATCGTTCTTCCAAAGTTAC+TGG + chr3_1:21093924-21093943 Msa0352330:CDS 35.0%
CCACTCATCCATTGTTAAAA+TGG - chr3_1:21094026-21094045 None:intergenic 35.0%
!! CCATTTTAACAATGGATGAG+TGG + chr3_1:21094023-21094042 Msa0352330:intron 35.0%
GGAGCAGCAAATACTTATTT+GGG + chr3_1:21094856-21094875 Msa0352330:CDS 35.0%
GAGCAGCAAATACTTATTTG+GGG + chr3_1:21094857-21094876 Msa0352330:CDS 35.0%
AGCAGCAAATACTTATTTGG+GGG + chr3_1:21094858-21094877 Msa0352330:CDS 35.0%
TCATAAAAGTCCTTTGCCAA+TGG - chr3_1:21095124-21095143 None:intergenic 35.0%
GAATAGATGTATATTGGCAC+TGG - chr3_1:21095220-21095239 None:intergenic 35.0%
! GTTTTACAAGGAAATCAGTC+TGG - chr3_1:21095272-21095291 None:intergenic 35.0%
GAGAAAGAAAGAAAGAAGGA+AGG - chr3_1:21095666-21095685 None:intergenic 35.0%
AAACAAAGATGATCCTGAAG+CGG + chr3_1:21095827-21095846 Msa0352330:CDS 35.0%
! TGAAATTTCTTTTCCGCTTC+AGG - chr3_1:21095843-21095862 None:intergenic 35.0%
ACATAAAGAATGGGGAAGAA+AGG - chr3_1:21095977-21095996 None:intergenic 35.0%
ATGTGCAACAGTTACGTATT+AGG + chr3_1:21096184-21096203 Msa0352330:intron 35.0%
GGCAGTTATACTAGATAAGT+AGG + chr3_1:21096224-21096243 Msa0352330:intron 35.0%
GGAAATCTAAAGGACAATGT+CGG + chr3_1:21096245-21096264 Msa0352330:intron 35.0%
!! AATGTCGGCTGACATTTTAA+TGG + chr3_1:21096260-21096279 Msa0352330:intron 35.0%
!! ATGTCGGCTGACATTTTAAT+GGG + chr3_1:21096261-21096280 Msa0352330:intron 35.0%
!!! TTTTAATGGGGACTGGTTAT+TGG + chr3_1:21096274-21096293 Msa0352330:intron 35.0%
ATTCCAAGAATTAGAGAGCT+TGG - chr3_1:21096310-21096329 None:intergenic 35.0%
AAGCTCTCTAATTCTTGGAA+TGG + chr3_1:21096309-21096328 Msa0352330:intron 35.0%
CTCAACATAGTGATAGTAAC+TGG - chr3_1:21096402-21096421 None:intergenic 35.0%
CAGTTACTATCACTATGTTG+AGG + chr3_1:21096400-21096419 Msa0352330:intron 35.0%
GGACATTTGTTTATGGAGAT+TGG + chr3_1:21096532-21096551 Msa0352330:intron 35.0%
TGAGAGAAAAAAGTAGGGAA+TGG + chr3_1:21096585-21096604 Msa0352330:intron 35.0%
GAAAAAAGTAGGGAATGGAT+TGG + chr3_1:21096590-21096609 Msa0352330:intron 35.0%
!! AAAAAGTAGGGAATGGATTG+GGG + chr3_1:21096592-21096611 Msa0352330:intron 35.0%
TTAGTTCCACATGGATATGT+AGG + chr3_1:21096694-21096713 Msa0352330:intron 35.0%
!! GGTTTTGTAAACCGAGAAAA+TGG + chr3_1:21096728-21096747 Msa0352330:CDS 35.0%
TTAATCTCTCAACTGTGATC+AGG + chr3_1:21097250-21097269 Msa0352330:intron 35.0%
GGACATCTTTCAGTATGTTA+AGG + chr3_1:21097348-21097367 Msa0352330:intron 35.0%
!!! TAATGGTTTTGATGCATCCA+CGG - chr3_1:21097443-21097462 None:intergenic 35.0%
! GATATGATTTGCAACACTTG+TGG + chr3_1:21097474-21097493 Msa0352330:CDS 35.0%
CTTACAAACGGAACTGAATA+TGG - chr3_1:21097537-21097556 None:intergenic 35.0%
AAGATCACACATTCTCTCTT+TGG + chr3_1:21097571-21097590 Msa0352330:intron 35.0%
! ATGTGATTTGCGGTAATTTG+TGG - chr3_1:21098052-21098071 None:intergenic 35.0%
! ATCACTGTCATTTGGCATAA+TGG - chr3_1:21098093-21098112 None:intergenic 35.0%
TGTTGTATGGAACTGAATGT+TGG + chr3_1:21098233-21098252 Msa0352330:intron 35.0%
CAACTTGAAGCATGTTGATA+TGG + chr3_1:21098324-21098343 Msa0352330:intron 35.0%
GTACAGAGTGTATTAGCTAT+TGG - chr3_1:21098369-21098388 None:intergenic 35.0%
AGCAACCAAGTCAGTTAAAT+TGG + chr3_1:21098473-21098492 Msa0352330:CDS 35.0%
AAGCAGGATCTTATAGTTAG+TGG - chr3_1:21098790-21098809 None:intergenic 35.0%
TTGTTTGGCACCATAATTGA+TGG - chr3_1:21098977-21098996 None:intergenic 35.0%
ACAGTAACATAAAGATCACC+AGG - chr3_1:21099229-21099248 None:intergenic 35.0%
AAAAAATGATTGAGGTCGTG+AGG - chr3_1:21099313-21099332 None:intergenic 35.0%
!! TACTGTTTTAAGCATCACTC+AGG + chr3_1:21099403-21099422 Msa0352330:CDS 35.0%
! AAGATAATTAGTCTCCACAC+AGG - chr3_1:21099465-21099484 None:intergenic 35.0%
!! GATCTCGATTTTGACAACTA+TGG - chr3_1:21099573-21099592 None:intergenic 35.0%
AGATCTTACCCAAGATCATT+TGG + chr3_1:21099588-21099607 Msa0352330:intron 35.0%
GATCTTACCCAAGATCATTT+GGG + chr3_1:21099589-21099608 Msa0352330:intron 35.0%
TAAATCGTGAGATCGTAACA+AGG + chr3_1:21099625-21099644 Msa0352330:intron 35.0%
CTGTAGATCATGAGATCATA+CGG - chr3_1:21100060-21100079 None:intergenic 35.0%
AAATCTCCAAACATATCCGA+CGG - chr3_1:21100102-21100121 None:intergenic 35.0%
ATCATTGGAATTGAAAGGGA+TGG + chr3_1:21100137-21100156 Msa0352330:intron 35.0%
CTATTTCAGCCTAAAAACTG+TGG - chr3_1:21100452-21100471 None:intergenic 35.0%
TTCAAGAAAGTGAGTTTGTG+AGG + chr3_1:21100507-21100526 Msa0352330:intron 35.0%
AAAGTGAGTTTGTGAGGAAA+AGG + chr3_1:21100513-21100532 Msa0352330:intron 35.0%
AAGTGAGTTTGTGAGGAAAA+GGG + chr3_1:21100514-21100533 Msa0352330:intron 35.0%
! GTTAAAACGTTTATGGTGGA+AGG - chr3_1:21100559-21100578 None:intergenic 35.0%
GGAGAGTCATTAAAATAGTG+GGG - chr3_1:21100608-21100627 None:intergenic 35.0%
GAGGAGAGTCATTAAAATAG+TGG - chr3_1:21100610-21100629 None:intergenic 35.0%
!!! AGTTTCTTAATTTTTGGGGC+TGG + chr3_1:21101136-21101155 Msa0352330:intron 35.0%
!! TTATATCCCATGTCGATTTG+AGG + chr3_1:21101195-21101214 Msa0352330:intron 35.0%
GGAATTATTTAAGGGAAGAG+TGG - chr3_1:21101263-21101282 None:intergenic 35.0%
TGAATTCCAAATGAGCATGT+TGG - chr3_1:21101303-21101322 None:intergenic 35.0%
! AACATGCTCATTTGGAATTC+AGG + chr3_1:21101302-21101321 Msa0352330:intron 35.0%
! GAGTTTGGTAGTATAAGAGA+AGG + chr3_1:21101417-21101436 Msa0352330:intron 35.0%
CAAATTGATACAAGCCATTC+AGG - chr3_1:21101714-21101733 None:intergenic 35.0%
!! TGATGTTTAGGAGTACCATA+AGG - chr3_1:21101853-21101872 None:intergenic 35.0%
!!! GTCTTTTTTCAGGCCATTTT+GGG + chr3_1:21101897-21101916 Msa0352330:intron 35.0%
! GATGTTGTTGTTAAGGTTTG+TGG + chr3_1:21101951-21101970 Msa0352330:intron 35.0%
CAGTTACTAAGACCAAAATG+TGG - chr3_1:21101999-21102018 None:intergenic 35.0%
TTGTTTGTCATCCTCTTAAC+AGG + chr3_1:21102189-21102208 Msa0352330:intron 35.0%
TGTTTGTCATCCTCTTAACA+GGG + chr3_1:21102190-21102209 Msa0352330:intron 35.0%
TCAAATCTAACACTCACACT+GGG - chr3_1:21102275-21102294 None:intergenic 35.0%
ATCAAATCTAACACTCACAC+TGG - chr3_1:21102276-21102295 None:intergenic 35.0%
! ACAGGTTTTTGTCAGTTCAA+AGG - chr3_1:21102357-21102376 None:intergenic 35.0%
TTGAACTGACAAAAACCTGT+TGG + chr3_1:21102357-21102376 Msa0352330:intron 35.0%
TTAGTTCCTTTCTGTCAGAA+GGG - chr3_1:21102391-21102410 None:intergenic 35.0%
ATTAGTTCCTTTCTGTCAGA+AGG - chr3_1:21102392-21102411 None:intergenic 35.0%
! TTTACTTCGGTCTTTTCCAT+CGG - chr3_1:21102456-21102475 None:intergenic 35.0%
! ATTTCCGATTGCTTTGTTGT+TGG + chr3_1:21102504-21102523 Msa0352330:intron 35.0%
TGAACCAACAACAAAGCAAT+CGG - chr3_1:21102511-21102530 None:intergenic 35.0%
!! TGCTTTGTTGTTGGTTCAAA+AGG + chr3_1:21102513-21102532 Msa0352330:intron 35.0%
! AAACTTTTACATGTTCCGAC+GGG - chr3_1:21102665-21102684 None:intergenic 35.0%
! CGGAACATGTAAAAGTTTTG+AGG + chr3_1:21102667-21102686 Msa0352330:intron 35.0%
ACAATCAATTTGTGGCCAAT+CGG + chr3_1:21102940-21102959 Msa0352330:three_prime_UTR 35.0%
TACAAAACTTCAATAGCAGG+CGG - chr3_1:21102977-21102996 None:intergenic 35.0%
ACATATACTCAAAAGTGGAG+GGG - chr3_1:21103034-21103053 None:intergenic 35.0%
! ATTTGTTGCGGAGGAGATTA+GGG - chr3_1:21093746-21093765 None:intergenic 40.0%
!! AGTATACAGATTTGTTGCGG+AGG - chr3_1:21093755-21093774 None:intergenic 40.0%
GAGTGTTACAAAGGGGATAT+AGG + chr3_1:21093880-21093899 Msa0352330:CDS 40.0%
CCAAATCAATCAAACCAGCA+TGG - chr3_1:21094003-21094022 None:intergenic 40.0%
!! CCATGCTGGTTTGATTGATT+TGG + chr3_1:21094000-21094019 Msa0352330:intron 40.0%
CATAGCTTCTCATTCGAAAC+AGG - chr3_1:21094353-21094372 None:intergenic 40.0%
TGTCAGACACTTACATGTGT+TGG + chr3_1:21094650-21094669 Msa0352330:intron 40.0%
TTTCTGACCGAATGCATGTT+CGG - chr3_1:21094679-21094698 None:intergenic 40.0%
ATGCATTCGGTCAGAAATGT+CGG + chr3_1:21094682-21094701 Msa0352330:intron 40.0%
! CACCTTATACTGATTGCAGT+TGG + chr3_1:21094799-21094818 Msa0352330:intron 40.0%
CTCCAACTGCAATCAGTATA+AGG - chr3_1:21094804-21094823 None:intergenic 40.0%
! ATACTGATTGCAGTTGGAGA+TGG + chr3_1:21094805-21094824 Msa0352330:intron 40.0%
! ATTGAAGAACTGGGTGCTAT+TGG + chr3_1:21094834-21094853 Msa0352330:CDS 40.0%
!! TTGAAGAACTGGGTGCTATT+GGG + chr3_1:21094835-21094854 Msa0352330:CDS 40.0%
GGGAGCAGCAAATACTTATT+TGG + chr3_1:21094855-21094874 Msa0352330:CDS 40.0%
ACTAGATCCATTCATGGATC+AGG + chr3_1:21094883-21094902 Msa0352330:CDS 40.0%
!! TGATTTGGTGACAAAGCAGA+TGG + chr3_1:21094990-21095009 Msa0352330:intron 40.0%
! ATTTTCAGCACCATTGGCAA+AGG + chr3_1:21095111-21095130 Msa0352330:intron 40.0%
GGCTAAGAGAGCTGTAAAAA+TGG - chr3_1:21095547-21095566 None:intergenic 40.0%
! GGATCATCTTTGTTTGTGTC+AGG - chr3_1:21095822-21095841 None:intergenic 40.0%
! AGAAGTTTCAAGGGCATATG+AGG + chr3_1:21095863-21095882 Msa0352330:CDS 40.0%
!! TGAACTGACTTTTGGTCTCT+TGG + chr3_1:21095951-21095970 Msa0352330:intron 40.0%
!!! ATTGTAGGTTTTGAAGGACG+AGG + chr3_1:21096003-21096022 Msa0352330:intron 40.0%
! AAAGCGTCAAGAGTATGATC+AGG + chr3_1:21096027-21096046 Msa0352330:CDS 40.0%
TGCAACAGTTACGTATTAGG+AGG + chr3_1:21096187-21096206 Msa0352330:intron 40.0%
TAGGAGGCAGTTATGTTTCT+AGG + chr3_1:21096203-21096222 Msa0352330:intron 40.0%
!! TGTCGGCTGACATTTTAATG+GGG + chr3_1:21096262-21096281 Msa0352330:intron 40.0%
AGACCAAGCTCTCTAATTCT+TGG + chr3_1:21096304-21096323 Msa0352330:intron 40.0%
!! GAATGGATTGGGGATATGAA+TGG + chr3_1:21096602-21096621 Msa0352330:intron 40.0%
TTCCACATGGATATGTAGGT+TGG + chr3_1:21096698-21096717 Msa0352330:intron 40.0%
CTCGGTTTACAAAACCTTCA+TGG - chr3_1:21096724-21096743 None:intergenic 40.0%
GTAAACCGAGAAAATGGTTC+TGG + chr3_1:21096734-21096753 Msa0352330:CDS 40.0%
! CATCTCCAGAACCATTTTCT+CGG - chr3_1:21096742-21096761 None:intergenic 40.0%
!! TGCAGACTGGCCTAATAAAA+AGG - chr3_1:21096869-21096888 None:intergenic 40.0%
TGTTCCGATTAAAGAGGTCA+TGG - chr3_1:21097283-21097302 None:intergenic 40.0%
GACCTCTTTAATCGGAACAT+TGG + chr3_1:21097284-21097303 Msa0352330:CDS 40.0%
CTCTTTAATCGGAACATTGG+CGG + chr3_1:21097287-21097306 Msa0352330:CDS 40.0%
ACAAACGGAACTGAATATGG+TGG - chr3_1:21097534-21097553 None:intergenic 40.0%
GAGAGAATGTGTGATCTTCA+GGG - chr3_1:21097569-21097588 None:intergenic 40.0%
AGAGAGAATGTGTGATCTTC+AGG - chr3_1:21097570-21097589 None:intergenic 40.0%
! AAACCTGTAAGCGCTGTAAA+GGG + chr3_1:21097641-21097660 Msa0352330:CDS 40.0%
ATGTACAAGCTGGCGTATTT+AGG + chr3_1:21097791-21097810 Msa0352330:intron 40.0%
! TTTAGGATGGAGACTACATG+TGG + chr3_1:21097808-21097827 Msa0352330:intron 40.0%
ACTACATGTGGTGCATGTAA+GGG + chr3_1:21097820-21097839 Msa0352330:intron 40.0%
CTGGCAAAATTGTCAAGGTA+TGG + chr3_1:21097845-21097864 Msa0352330:intron 40.0%
ATGCCAAATGACAGTGATAG+AGG + chr3_1:21098095-21098114 Msa0352330:intron 40.0%
TGCCAAATGACAGTGATAGA+GGG + chr3_1:21098096-21098115 Msa0352330:intron 40.0%
GTAAGGCTTGCATTGTTGTA+TGG + chr3_1:21098220-21098239 Msa0352330:intron 40.0%
TTGGACAGTAGAAAGACAAC+AGG + chr3_1:21098252-21098271 Msa0352330:intron 40.0%
TGGACAGTAGAAAGACAACA+GGG + chr3_1:21098253-21098272 Msa0352330:intron 40.0%
AGTTTCTGCAAGTCATGCAA+GGG + chr3_1:21098435-21098454 Msa0352330:CDS 40.0%
!! TTTAACTGACTTGGTTGCTC+TGG - chr3_1:21098472-21098491 None:intergenic 40.0%
GAGCACAATGCAAAGGAAAT+TGG - chr3_1:21098596-21098615 None:intergenic 40.0%
GAGAACAAGCAGTAACAGAA+AGG + chr3_1:21098856-21098875 Msa0352330:intron 40.0%
! TTCGTCCTTTTTCTTCTTGC+AGG + chr3_1:21099331-21099350 Msa0352330:intron 40.0%
TCTGACCTGCAAGAAGAAAA+AGG - chr3_1:21099339-21099358 None:intergenic 40.0%
GAATATCCGATCCTTCTCTA+CGG - chr3_1:21099376-21099395 None:intergenic 40.0%
TCTTGATTCCTTATCCTGTG+TGG + chr3_1:21099448-21099467 Msa0352330:intron 40.0%
! ATTAGTCTCCACACAGGATA+AGG - chr3_1:21099459-21099478 None:intergenic 40.0%
! TAAGCATCGTTTCGCATTCA+AGG - chr3_1:21099528-21099547 None:intergenic 40.0%
GAAACGATGCTTAACCATGA+TGG + chr3_1:21099535-21099554 Msa0352330:intron 40.0%
!! ATTTTGACAACTATGGCCCA+CGG - chr3_1:21099566-21099585 None:intergenic 40.0%
ACAAAATCTTCTTGCGAACC+AGG + chr3_1:21099898-21099917 Msa0352330:intron 40.0%
TGGAATTGAAAGGGATGGTA+TGG + chr3_1:21100142-21100161 Msa0352330:intron 40.0%
GGAATTGAAAGGGATGGTAT+GGG + chr3_1:21100143-21100162 Msa0352330:intron 40.0%
GAATTGAAAGGGATGGTATG+GGG + chr3_1:21100144-21100163 Msa0352330:intron 40.0%
ATGGTATGGGGCAAAGAAAT+GGG + chr3_1:21100156-21100175 Msa0352330:intron 40.0%
AGAATTGGGTATAGGGTTCT+TGG - chr3_1:21100216-21100235 None:intergenic 40.0%
TTGGAGCAGAATTGGGTATA+GGG - chr3_1:21100223-21100242 None:intergenic 40.0%
ATTGGAGCAGAATTGGGTAT+AGG - chr3_1:21100224-21100243 None:intergenic 40.0%
CTAGATCTTGCGAATAACCA+GGG - chr3_1:21100296-21100315 None:intergenic 40.0%
AGTGAGTTTGTGAGGAAAAG+GGG + chr3_1:21100515-21100534 Msa0352330:intron 40.0%
ACACAATGGTTAGGAATGCA+GGG - chr3_1:21100651-21100670 None:intergenic 40.0%
AACACAATGGTTAGGAATGC+AGG - chr3_1:21100652-21100671 None:intergenic 40.0%
TGCATTCCTAACCATTGTGT+TGG + chr3_1:21100651-21100670 Msa0352330:intron 40.0%
TTCCTAACCATTGTGTTGGA+TGG + chr3_1:21100655-21100674 Msa0352330:intron 40.0%
TATCACACCATCCAACACAA+TGG - chr3_1:21100665-21100684 None:intergenic 40.0%
GTTGGATGGTGTGATATCAA+TGG + chr3_1:21100669-21100688 Msa0352330:intron 40.0%
! CACGCAATGCTGGTTATAAA+GGG + chr3_1:21100740-21100759 Msa0352330:intron 40.0%
!!! TTTTGGGGCTGGTTTATTTG+AGG + chr3_1:21101147-21101166 Msa0352330:intron 40.0%
ATTTAAGGGAAGAGTGGTGA+AGG - chr3_1:21101257-21101276 None:intergenic 40.0%
CATTGACCAACATGCTCATT+TGG + chr3_1:21101294-21101313 Msa0352330:intron 40.0%
! GTTTAGAGCTAGCTAGTTGA+AGG + chr3_1:21101471-21101490 Msa0352330:intron 40.0%
TGCTATAGCAGATCGATCTA+TGG - chr3_1:21101557-21101576 None:intergenic 40.0%
TGATGTGTAGTGATTGGTAC+TGG + chr3_1:21101770-21101789 Msa0352330:intron 40.0%
ATCCAAACTGTGTGTGAACA+TGG - chr3_1:21101801-21101820 None:intergenic 40.0%
CAGTTGTCTGTGTTTCCTTA+TGG + chr3_1:21101835-21101854 Msa0352330:intron 40.0%
!!! GGTCTTTTTTCAGGCCATTT+TGG + chr3_1:21101896-21101915 Msa0352330:intron 40.0%
!!! TTTTTTCAGGCCATTTTGGG+CGG + chr3_1:21101900-21101919 Msa0352330:intron 40.0%
! TACTGGGGATGTTGTTGTTA+AGG + chr3_1:21101944-21101963 Msa0352330:CDS 40.0%
!! AAGGTGGTTCTGAAACAGAA+AGG + chr3_1:21102079-21102098 Msa0352330:CDS 40.0%
GCTTAGGAAATTACTTCCGA+TGG + chr3_1:21102437-21102456 Msa0352330:intron 40.0%
!!! TAAAAGTTTTGAGGGGGTCT+GGG + chr3_1:21102676-21102695 Msa0352330:intron 40.0%
! CGAAGCAGCTTTTCCTTTAT+CGG - chr3_1:21102874-21102893 None:intergenic 40.0%
CGATAAAGGAAAAGCTGCTT+CGG + chr3_1:21102872-21102891 Msa0352330:CDS 40.0%
ACATTTGCAGAGTATGCAGT+CGG + chr3_1:21102908-21102927 Msa0352330:three_prime_UTR 40.0%
CAATCAATTTGTGGCCAATC+GGG + chr3_1:21102941-21102960 Msa0352330:three_prime_UTR 40.0%
AAGAAGAAGCTTGACGCCAT+TGG - chr3_1:21093712-21093731 None:intergenic 45.0%
TTTGTTGCGGAGGAGATTAG+GGG - chr3_1:21093745-21093764 None:intergenic 45.0%
!! GATTTGTTGCGGAGGAGATT+AGG - chr3_1:21093747-21093766 None:intergenic 45.0%
! GGATGAGTGGGTGTTTGTTA+TGG + chr3_1:21094036-21094055 Msa0352330:intron 45.0%
! TCAGTGACGTGTGGGTTATT+TGG + chr3_1:21094627-21094646 Msa0352330:intron 45.0%
TTGGACACCGAACATGCATT+CGG + chr3_1:21094669-21094688 Msa0352330:intron 45.0%
! TGGTGCTGAAAATGCGTCAA+GGG - chr3_1:21095104-21095123 None:intergenic 45.0%
! ATGGTGCTGAAAATGCGTCA+AGG - chr3_1:21095105-21095124 None:intergenic 45.0%
! TGACGCATTTTCAGCACCAT+TGG + chr3_1:21095105-21095124 Msa0352330:intron 45.0%
!! GCTGACATTTTAATGGGGAC+TGG + chr3_1:21096267-21096286 Msa0352330:intron 45.0%
!! AATGGGGACTGGTTATTGGT+TGG + chr3_1:21096278-21096297 Msa0352330:intron 45.0%
CCAAGAATTTCGAGAGTCTC+GGG - chr3_1:21096340-21096359 None:intergenic 45.0%
CCCAAGAATTTCGAGAGTCT+CGG - chr3_1:21096341-21096360 None:intergenic 45.0%
CCGAGACTCTCGAAATTCTT+GGG + chr3_1:21096338-21096357 Msa0352330:intron 45.0%
! GATATGTAGGTTGGCCATGA+AGG + chr3_1:21096707-21096726 Msa0352330:intron 45.0%
!! CGAGAAAATGGTTCTGGAGA+TGG + chr3_1:21096740-21096759 Msa0352330:CDS 45.0%
!! GAAAATGGTTCTGGAGATGG+TGG + chr3_1:21096743-21096762 Msa0352330:CDS 45.0%
AGAGACCGGCAAGTTATTAC+AGG - chr3_1:21096806-21096825 None:intergenic 45.0%
ACCAACTATCCAACTGCATC+AGG + chr3_1:21096977-21096996 Msa0352330:intron 45.0%
! TGTCTTTTGCCTGATGCAGT+TGG - chr3_1:21096989-21097008 None:intergenic 45.0%
CGCCAATGTTCCGATTAAAG+AGG - chr3_1:21097289-21097308 None:intergenic 45.0%
GGGCGCATAGTTCTTACAAA+CGG - chr3_1:21097549-21097568 None:intergenic 45.0%
CTCTTTGGCTGAACAATTGC+AGG + chr3_1:21097586-21097605 Msa0352330:intron 45.0%
TTTGGCTGAACAATTGCAGG+TGG + chr3_1:21097589-21097608 Msa0352330:intron 45.0%
TTGGCTGAACAATTGCAGGT+GGG + chr3_1:21097590-21097609 Msa0352330:intron 45.0%
TTACAGCGCTTACAGGTTTC+AGG - chr3_1:21097640-21097659 None:intergenic 45.0%
! GAAACCTGTAAGCGCTGTAA+AGG + chr3_1:21097640-21097659 Msa0352330:CDS 45.0%
CAGCTTGTACATATGTCTGC+CGG - chr3_1:21097783-21097802 None:intergenic 45.0%
ACAAGCTGGCGTATTTAGGA+TGG + chr3_1:21097795-21097814 Msa0352330:intron 45.0%
GACTACATGTGGTGCATGTA+AGG + chr3_1:21097819-21097838 Msa0352330:intron 45.0%
GGGATCTGGCAAAATTGTCA+AGG + chr3_1:21097840-21097859 Msa0352330:intron 45.0%
GCCAAATGACAGTGATAGAG+GGG + chr3_1:21098097-21098116 Msa0352330:intron 45.0%
CCAAATGACAGTGATAGAGG+GGG + chr3_1:21098098-21098117 Msa0352330:intron 45.0%
CATGTTGATATGGCTATGCC+TGG + chr3_1:21098334-21098353 Msa0352330:intron 45.0%
AGCTATTGGTACGAAAGACC+AGG - chr3_1:21098355-21098374 None:intergenic 45.0%
GAGTTTCTGCAAGTCATGCA+AGG + chr3_1:21098434-21098453 Msa0352330:intron 45.0%
TTCCTTTGCATTGTGCTCAC+TGG + chr3_1:21098598-21098617 Msa0352330:intron 45.0%
!!! GAGTTTTGGAGAAAGCTCGT+TGG + chr3_1:21099062-21099081 Msa0352330:intron 45.0%
TGTCTTCCGTAGAGAAGGAT+CGG + chr3_1:21099367-21099386 Msa0352330:CDS 45.0%
! TAACCATGATGGTGTAACCG+TGG + chr3_1:21099546-21099565 Msa0352330:intron 45.0%
! AACCATGATGGTGTAACCGT+GGG + chr3_1:21099547-21099566 Msa0352330:intron 45.0%
GCAAAAAAAGTTGGAGAGGC+CGG - chr3_1:21099999-21100018 None:intergenic 45.0%
CGGTGCAAAAAAAGTTGGAG+AGG - chr3_1:21100003-21100022 None:intergenic 45.0%
GATGGTATGGGGCAAAGAAA+TGG + chr3_1:21100155-21100174 Msa0352330:intron 45.0%
TGGTATGGGGCAAAGAAATG+GGG + chr3_1:21100157-21100176 Msa0352330:intron 45.0%
GGCAAAGAAATGGGGAAGAT+GGG + chr3_1:21100165-21100184 Msa0352330:intron 45.0%
AAAGAAATGGGGAAGATGGG+AGG + chr3_1:21100168-21100187 Msa0352330:intron 45.0%
TCCTGCATTGGAGCAGAATT+GGG - chr3_1:21100230-21100249 None:intergenic 45.0%
CCTAGATCTTGCGAATAACC+AGG - chr3_1:21100297-21100316 None:intergenic 45.0%
CCTGGTTATTCGCAAGATCT+AGG + chr3_1:21100294-21100313 Msa0352330:intron 45.0%
ACAATGGTTAGGAATGCAGG+GGG - chr3_1:21100649-21100668 None:intergenic 45.0%
CACAATGGTTAGGAATGCAG+GGG - chr3_1:21100650-21100669 None:intergenic 45.0%
CACCATCCAACACAATGGTT+AGG - chr3_1:21100660-21100679 None:intergenic 45.0%
GGATGGTGTGATATCAATGG+AGG + chr3_1:21100672-21100691 Msa0352330:intron 45.0%
GAGGAAACTGACACATGACA+TGG + chr3_1:21100691-21100710 Msa0352330:intron 45.0%
GAAACTGACACATGACATGG+TGG + chr3_1:21100694-21100713 Msa0352330:intron 45.0%
CCTTTATAACCAGCATTGCG+TGG - chr3_1:21100742-21100761 None:intergenic 45.0%
! CCACGCAATGCTGGTTATAA+AGG + chr3_1:21100739-21100758 Msa0352330:intron 45.0%
! TGTCCCATTGTGGAAAGTGT+CGG + chr3_1:21100806-21100825 Msa0352330:intron 45.0%
!! CGAGCACTGATGGTTACTTA+CGG + chr3_1:21100874-21100893 Msa0352330:intron 45.0%
!! GGCTGGTTTATTTGAGGCAT+TGG + chr3_1:21101153-21101172 Msa0352330:intron 45.0%
TTGGCACCTCAAATCGACAT+GGG - chr3_1:21101204-21101223 None:intergenic 45.0%
TTTGGCACCTCAAATCGACA+TGG - chr3_1:21101205-21101224 None:intergenic 45.0%
CTCCATGTTCACACACAGTT+TGG + chr3_1:21101796-21101815 Msa0352330:intron 45.0%
AGTAAGAGTTGGGACCTGAA+TGG - chr3_1:21101928-21101947 None:intergenic 45.0%
ATTCAGGTCCCAACTCTTAC+TGG + chr3_1:21101927-21101946 Msa0352330:CDS 45.0%
TTCAGGTCCCAACTCTTACT+GGG + chr3_1:21101928-21101947 Msa0352330:CDS 45.0%
CAACATCCCCAGTAAGAGTT+GGG - chr3_1:21101938-21101957 None:intergenic 45.0%
ACAACATCCCCAGTAAGAGT+TGG - chr3_1:21101939-21101958 None:intergenic 45.0%
!! AATGGGGTGTCTTATTTCGC+AGG + chr3_1:21102030-21102049 Msa0352330:intron 45.0%
! TGGTCTTGATCCCTGTTAAG+AGG - chr3_1:21102203-21102222 None:intergenic 45.0%
AAACAGCATTTACCGAAGCG+CGG + chr3_1:21102328-21102347 Msa0352330:intron 45.0%
! AGAAGGGACGATTTTCCAAC+AGG - chr3_1:21102375-21102394 None:intergenic 45.0%
AATCGTCCCTTCTGACAGAA+AGG + chr3_1:21102382-21102401 Msa0352330:intron 45.0%
AAGCACTCTTCCTCCAGAAA+TGG - chr3_1:21102421-21102440 None:intergenic 45.0%
!! TTTCTGGAGGAAGAGTGCTT+AGG + chr3_1:21102421-21102440 Msa0352330:intron 45.0%
TTTCCTACAGCCTTGAACGT+CGG + chr3_1:21102600-21102619 Msa0352330:intron 45.0%
TAATCCATCTCCGACGTTCA+AGG - chr3_1:21102613-21102632 None:intergenic 45.0%
!! AACGTCGGAGATGGATTAGT+AGG + chr3_1:21102615-21102634 Msa0352330:intron 45.0%
TAGGTTTCAACCGACACTGA+AGG + chr3_1:21102634-21102653 Msa0352330:intron 45.0%
!!! GTAAAAGTTTTGAGGGGGTC+TGG + chr3_1:21102675-21102694 Msa0352330:intron 45.0%
CTGTCTATCTGTCAGGTTTC+TGG - chr3_1:21102805-21102824 None:intergenic 45.0%
GAAACCTGACAGATAGACAG+CGG + chr3_1:21102805-21102824 Msa0352330:intron 45.0%
AAACCTGACAGATAGACAGC+GGG + chr3_1:21102806-21102825 Msa0352330:CDS 45.0%
AAAACTTCAATAGCAGGCGG+CGG - chr3_1:21102974-21102993 None:intergenic 45.0%
ATACTGCAACAGGTGCATGA+AGG - chr3_1:21103121-21103140 None:intergenic 45.0%
ACAGACTAGGATACTGCAAC+AGG - chr3_1:21103131-21103150 None:intergenic 45.0%
!!! TTTTTTTTATTGATTTTTTT+TGG + chr3_1:21093828-21093847 Msa0352330:intron 5.0%
!! ATTAATTAAATAATTACAAT+GGG - chr3_1:21096366-21096385 None:intergenic 5.0%
!! AATTAATTAAATAATTACAA+TGG - chr3_1:21096367-21096386 None:intergenic 5.0%
!!! ATTTTTTTTTTTTAGAATTT+TGG + chr3_1:21098514-21098533 Msa0352330:intron 5.0%
!!! TTTTTTTTTTTTAGAATTTT+GGG + chr3_1:21098515-21098534 Msa0352330:intron 5.0%
CCATTGGAGCGAACCATTTG+GGG - chr3_1:21093696-21093715 None:intergenic 50.0%
GCCATTGGAGCGAACCATTT+GGG - chr3_1:21093697-21093716 None:intergenic 50.0%
!! TGGTGGTGCTGGTGAATTTC+AGG + chr3_1:21093848-21093867 Msa0352330:intron 50.0%
TCACATGTGTCAGTGACGTG+TGG + chr3_1:21094618-21094637 Msa0352330:intron 50.0%
CACATGTGTCAGTGACGTGT+GGG + chr3_1:21094619-21094638 Msa0352330:intron 50.0%
GGGGCAACTAGATCCATTCA+TGG + chr3_1:21094877-21094896 Msa0352330:CDS 50.0%
! GGTGCTGAAAATGCGTCAAG+GGG - chr3_1:21095103-21095122 None:intergenic 50.0%
CCCGAGACTCTCGAAATTCT+TGG + chr3_1:21096337-21096356 Msa0352330:intron 50.0%
GGCCAACCTACATATCCATG+TGG - chr3_1:21096703-21096722 None:intergenic 50.0%
GCCTGATGCAGTTGGATAGT+TGG - chr3_1:21096981-21097000 None:intergenic 50.0%
! TAATCGGAACATTGGCGGAC+AGG + chr3_1:21097292-21097311 Msa0352330:CDS 50.0%
TCCTTTATGGAAGCTGTCCG+TGG + chr3_1:21097423-21097442 Msa0352330:CDS 50.0%
TCCACGGACAGCTTCCATAA+AGG - chr3_1:21097427-21097446 None:intergenic 50.0%
TGAACAATTGCAGGTGGGAG+TGG + chr3_1:21097595-21097614 Msa0352330:intron 50.0%
GAACAATTGCAGGTGGGAGT+GGG + chr3_1:21097596-21097615 Msa0352330:intron 50.0%
AACAATTGCAGGTGGGAGTG+GGG + chr3_1:21097597-21097616 Msa0352330:intron 50.0%
! GTTTCAGGTCTTGTACCAGG+AGG - chr3_1:21097625-21097644 None:intergenic 50.0%
! CAGGTTTCAGGTCTTGTACC+AGG - chr3_1:21097628-21097647 None:intergenic 50.0%
TGACCCTTTACAGCGCTTAC+AGG - chr3_1:21097647-21097666 None:intergenic 50.0%
! TGTAAGCGCTGTAAAGGGTC+AGG + chr3_1:21097646-21097665 Msa0352330:CDS 50.0%
CGGCAGACATATGTACAAGC+TGG + chr3_1:21097781-21097800 Msa0352330:intron 50.0%
TGTGGTGCATGTAAGGGATC+TGG + chr3_1:21097826-21097845 Msa0352330:intron 50.0%
CCCCCTCTATCACTGTCATT+TGG - chr3_1:21098101-21098120 None:intergenic 50.0%
! CAAGTCATGCAAGGGTGCAA+AGG + chr3_1:21098443-21098462 Msa0352330:CDS 50.0%
GACCAGTGAGCACAATGCAA+AGG - chr3_1:21098603-21098622 None:intergenic 50.0%
!! GTGGATTGGCTCACATCAGT+GGG - chr3_1:21098682-21098701 None:intergenic 50.0%
ATCACCAGGTCGATCTCCTT+CGG - chr3_1:21099215-21099234 None:intergenic 50.0%
GATCCTGTCTTCCGTAGAGA+AGG + chr3_1:21099362-21099381 Msa0352330:CDS 50.0%
GATCCTTCTCTACGGAAGAC+AGG - chr3_1:21099368-21099387 None:intergenic 50.0%
CGCAGGTCATATGGATCACA+AGG + chr3_1:21099925-21099944 Msa0352330:intron 50.0%
AGATCGCAAGATCGAGGAAG+CGG - chr3_1:21099965-21099984 None:intergenic 50.0%
AGAGGTAGATCGCAAGATCG+AGG - chr3_1:21099971-21099990 None:intergenic 50.0%
CAGCGCGGTGCAAAAAAAGT+TGG - chr3_1:21100008-21100027 None:intergenic 50.0%
!!! CAACTTTTTTTGCACCGCGC+TGG + chr3_1:21100006-21100025 Msa0352330:intron 50.0%
ACCATGCCGTCGGATATGTT+TGG + chr3_1:21100093-21100112 Msa0352330:intron 50.0%
TCCAAACATATCCGACGGCA+TGG - chr3_1:21100097-21100116 None:intergenic 50.0%
GGGCAAAGAAATGGGGAAGA+TGG + chr3_1:21100164-21100183 Msa0352330:intron 50.0%
ACCCAATTCTGCTCCAATGC+AGG + chr3_1:21100226-21100245 Msa0352330:intron 50.0%
CTCCTGCATTGGAGCAGAAT+TGG - chr3_1:21100231-21100250 None:intergenic 50.0%
! TCTTAGTGCTGCTCCTGCAT+TGG - chr3_1:21100242-21100261 None:intergenic 50.0%
GCAGGAGCAGCACTAAGAAT+AGG + chr3_1:21100244-21100263 Msa0352330:intron 50.0%
! ACACATGACATGGTGGAGAG+TGG + chr3_1:21100701-21100720 Msa0352330:intron 50.0%
!! TGGTTATAAAGGGTGCTGCG+AGG + chr3_1:21100750-21100769 Msa0352330:intron 50.0%
!! TTATAAAGGGTGCTGCGAGG+TGG + chr3_1:21100753-21100772 Msa0352330:intron 50.0%
!! GTCCCATTGTGGAAAGTGTC+GGG + chr3_1:21100807-21100826 Msa0352330:intron 50.0%
!! TCCCATTGTGGAAAGTGTCG+GGG + chr3_1:21100808-21100827 Msa0352330:intron 50.0%
GGACCACTTTGTGGCAACAA+TGG + chr3_1:21100838-21100857 Msa0352330:intron 50.0%
CCACCATTGTTGCCACAAAG+TGG - chr3_1:21100844-21100863 None:intergenic 50.0%
CCACTTTGTGGCAACAATGG+TGG + chr3_1:21100841-21100860 Msa0352330:intron 50.0%
CTTTGTGGCAACAATGGTGG+TGG + chr3_1:21100844-21100863 Msa0352330:intron 50.0%
AAGTGCCAGCTGTATACAGC+TGG - chr3_1:21101500-21101519 None:intergenic 50.0%
CTGAATGGTTCCGCCCAAAA+TGG - chr3_1:21101913-21101932 None:intergenic 50.0%
! CATTTTGGGCGGAACCATTC+AGG + chr3_1:21101911-21101930 Msa0352330:CDS 50.0%
TCAGGTCCCAACTCTTACTG+GGG + chr3_1:21101929-21101948 Msa0352330:CDS 50.0%
TTCTGACCGTGTTGTGTTCC+AGG - chr3_1:21102061-21102080 None:intergenic 50.0%
TGGAACACAACACGGTCAGA+AGG + chr3_1:21102060-21102079 Msa0352330:CDS 50.0%
AACACAACACGGTCAGAAGG+TGG + chr3_1:21102063-21102082 Msa0352330:CDS 50.0%
ACGGGCATTTCCTTCAGTGT+CGG - chr3_1:21102647-21102666 None:intergenic 50.0%
ACACTGAAGGAAATGCCCGT+CGG + chr3_1:21102647-21102666 Msa0352330:intron 50.0%
ATTCCCGCTGTCTATCTGTC+AGG - chr3_1:21102812-21102831 None:intergenic 50.0%
CCCCAAATGGTTCGCTCCAA+TGG + chr3_1:21093693-21093712 Msa0352330:exon 55.0%
CGCCATTGGAGCGAACCATT+TGG - chr3_1:21093698-21093717 None:intergenic 55.0%
!! GGTTCTGGAGATGGTGGCTT+TGG + chr3_1:21096749-21096768 Msa0352330:CDS 55.0%
!! GATGGTGGCTTTGGTCCCTT+TGG + chr3_1:21096758-21096777 Msa0352330:CDS 55.0%
! CATTGGCGGACAGGATGTCA+AGG + chr3_1:21097301-21097320 Msa0352330:CDS 55.0%
!! GGTGGATTGGCTCACATCAG+TGG - chr3_1:21098683-21098702 None:intergenic 55.0%
TCACCAGGTCGATCTCCTTC+GGG - chr3_1:21099214-21099233 None:intergenic 55.0%
! CCATATGACCTGCGTTGACC+TGG - chr3_1:21099919-21099938 None:intergenic 55.0%
CCAGGTCAACGCAGGTCATA+TGG + chr3_1:21099916-21099935 Msa0352330:intron 55.0%
!!! TTTTTTGCACCGCGCTGGCA+CGG + chr3_1:21100011-21100030 Msa0352330:intron 55.0%
GCGCTTAACAACCATGCCGT+CGG + chr3_1:21100083-21100102 Msa0352330:intron 55.0%
AGGGGGTTACACTGGAAGGA+GGG - chr3_1:21100632-21100651 None:intergenic 55.0%
ATGCAGGGGGTTACACTGGA+AGG - chr3_1:21100636-21100655 None:intergenic 55.0%
AGGAATGCAGGGGGTTACAC+TGG - chr3_1:21100640-21100659 None:intergenic 55.0%
! ATGGTGGAGAGTGGAGACCA+TGG + chr3_1:21100710-21100729 Msa0352330:intron 55.0%
TGGAGAGTGGAGACCATGGT+TGG + chr3_1:21100714-21100733 Msa0352330:intron 55.0%
GTGGTGACAGTGTCCCATTG+TGG + chr3_1:21100796-21100815 Msa0352330:intron 55.0%
CCCCCGACACTTTCCACAAT+GGG - chr3_1:21100812-21100831 None:intergenic 55.0%
!! CCCATTGTGGAAAGTGTCGG+GGG + chr3_1:21100809-21100828 Msa0352330:intron 55.0%
ACCCCCGACACTTTCCACAA+TGG - chr3_1:21100813-21100832 None:intergenic 55.0%
!! ATTGTGGAAAGTGTCGGGGG+TGG + chr3_1:21100812-21100831 Msa0352330:intron 55.0%
!! TGTGGCAACAATGGTGGTGG+AGG + chr3_1:21100847-21100866 Msa0352330:intron 55.0%
!! GTGGCAACAATGGTGGTGGA+GGG + chr3_1:21100848-21100867 Msa0352330:intron 55.0%
!! TGGAGGGTATCGAGCACTGA+TGG + chr3_1:21100864-21100883 Msa0352330:intron 55.0%
GGATGCCAGCTGTATACAGC+TGG + chr3_1:21101492-21101511 Msa0352330:intron 55.0%
CTTATTTCGCAGGTGCGTCC+TGG + chr3_1:21102040-21102059 Msa0352330:intron 55.0%
GTGCGTCCTGGAACACAACA+CGG + chr3_1:21102052-21102071 Msa0352330:CDS 55.0%
GTTCAAAGGCTTCCGCGCTT+CGG - chr3_1:21102343-21102362 None:intergenic 55.0%
TCTCCGACGTTCAAGGCTGT+AGG - chr3_1:21102606-21102625 None:intergenic 55.0%
ACAGCCTTGAACGTCGGAGA+TGG + chr3_1:21102606-21102625 Msa0352330:intron 55.0%
GGAAAAGCTGCTTCGGCTTC+TGG + chr3_1:21102879-21102898 Msa0352330:CDS 55.0%
!! GGTGGCTTTGGTCCCTTTGG+AGG + chr3_1:21096761-21096780 Msa0352330:CDS 60.0%
! GGCTTTGGTCCCTTTGGAGG+CGG + chr3_1:21096764-21096783 Msa0352330:CDS 60.0%
! TTTGGTCCCTTTGGAGGCGG+TGG + chr3_1:21096767-21096786 Msa0352330:CDS 60.0%
CCAAAGCCACCGCCTCCAAA+GGG - chr3_1:21096776-21096795 None:intergenic 60.0%
TCCAAAGCCACCGCCTCCAA+AGG - chr3_1:21096777-21096796 None:intergenic 60.0%
GCGCTGTAAAGGGTCAGGAG+TGG + chr3_1:21097651-21097670 Msa0352330:CDS 60.0%
! AGTGGTGGTGCAGATCCCGA+AGG + chr3_1:21099196-21099215 Msa0352330:CDS 60.0%
GATCCCGAAGGAGATCGACC+TGG + chr3_1:21099208-21099227 Msa0352330:CDS 60.0%
GGCCCACGGTTACACCATCA+TGG - chr3_1:21099552-21099571 None:intergenic 60.0%
CTTGCGAACCAGGTCAACGC+AGG + chr3_1:21099908-21099927 Msa0352330:intron 60.0%
TGCGATCTACCTCTGCACGC+CGG + chr3_1:21099977-21099996 Msa0352330:intron 60.0%
GGGTTACACTGGAAGGAGGG+AGG - chr3_1:21100629-21100648 None:intergenic 60.0%
CAGGGGGTTACACTGGAAGG+AGG - chr3_1:21100633-21100652 None:intergenic 60.0%
GCATTGCGTGGCACCAACCA+TGG - chr3_1:21100730-21100749 None:intergenic 60.0%
!! TGGTTGGTGCCACGCAATGC+TGG + chr3_1:21100730-21100749 Msa0352330:intron 60.0%
!! TAAAGGGTGCTGCGAGGTGG+AGG + chr3_1:21100756-21100775 Msa0352330:intron 60.0%
!! AAAGGGTGCTGCGAGGTGGA+GGG + chr3_1:21100757-21100776 Msa0352330:intron 60.0%
AGGTGGAGGGTGACAAGCAG+TGG + chr3_1:21100770-21100789 Msa0352330:intron 60.0%
GGGTGACAAGCAGTGGTGAG+TGG + chr3_1:21100777-21100796 Msa0352330:intron 60.0%
!! TGGAAAGTGTCGGGGGTGGA+GGG + chr3_1:21100816-21100835 Msa0352330:intron 60.0%
! CCCTTTGGAGGCGGTGGCTT+TGG + chr3_1:21096773-21096792 Msa0352330:CDS 65.0%
CTCCTTCAACCGTGCCAGCG+CGG - chr3_1:21100023-21100042 None:intergenic 65.0%
!! GTGGAAAGTGTCGGGGGTGG+AGG + chr3_1:21100815-21100834 Msa0352330:intron 65.0%
!! GGAAAGTGTCGGGGGTGGAG+GGG + chr3_1:21100817-21100836 Msa0352330:intron 65.0%
GGGTGGAGGGGACCACTTTG+TGG + chr3_1:21100829-21100848 Msa0352330:intron 65.0%
GGTGGGAGTGGGGTTCCTCC+TGG + chr3_1:21097607-21097626 Msa0352330:intron 70.0%
TTGGAGAGGCCGGCGTGCAG+AGG - chr3_1:21099989-21100008 None:intergenic 70.0%
! CACCGCGCTGGCACGGTTGA+AGG + chr3_1:21100018-21100037 Msa0352330:intron 70.0%
GCGGCGGCTTCTTGCCCGAT+TGG - chr3_1:21102958-21102977 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 21093453 21103279 21093453 ID=Msa0352330;Name=Msa0352330
chr3_1 mRNA 21093453 21103279 21093453 ID=Msa0352330-mRNA-1;Parent=Msa0352330;Name=Msa0352330-mRNA-1;_AED=0.10;_eAED=0.10;_QI=224|0.94|1|1|0.88|0.88|18|374|419
chr3_1 exon 21093453 21093614 21093453 ID=Msa0352330-mRNA-1:exon:4776;Parent=Msa0352330-mRNA-1
chr3_1 exon 21093637 21093767 21093637 ID=Msa0352330-mRNA-1:exon:4777;Parent=Msa0352330-mRNA-1
chr3_1 exon 21093870 21093963 21093870 ID=Msa0352330-mRNA-1:exon:4778;Parent=Msa0352330-mRNA-1
chr3_1 exon 21094818 21094904 21094818 ID=Msa0352330-mRNA-1:exon:4779;Parent=Msa0352330-mRNA-1
chr3_1 exon 21095119 21095201 21095119 ID=Msa0352330-mRNA-1:exon:4780;Parent=Msa0352330-mRNA-1
chr3_1 exon 21095801 21095884 21095801 ID=Msa0352330-mRNA-1:exon:4781;Parent=Msa0352330-mRNA-1
chr3_1 exon 21096010 21096048 21096010 ID=Msa0352330-mRNA-1:exon:4782;Parent=Msa0352330-mRNA-1
chr3_1 exon 21096716 21096805 21096716 ID=Msa0352330-mRNA-1:exon:4783;Parent=Msa0352330-mRNA-1
chr3_1 exon 21097272 21097322 21097272 ID=Msa0352330-mRNA-1:exon:4784;Parent=Msa0352330-mRNA-1
chr3_1 exon 21097408 21097495 21097408 ID=Msa0352330-mRNA-1:exon:4785;Parent=Msa0352330-mRNA-1
chr3_1 exon 21097608 21097672 21097608 ID=Msa0352330-mRNA-1:exon:4786;Parent=Msa0352330-mRNA-1
chr3_1 exon 21098435 21098507 21098435 ID=Msa0352330-mRNA-1:exon:4787;Parent=Msa0352330-mRNA-1
chr3_1 exon 21099161 21099252 21099161 ID=Msa0352330-mRNA-1:exon:4788;Parent=Msa0352330-mRNA-1
chr3_1 exon 21099353 21099424 21099353 ID=Msa0352330-mRNA-1:exon:4789;Parent=Msa0352330-mRNA-1
chr3_1 exon 21101909 21101965 21101909 ID=Msa0352330-mRNA-1:exon:4790;Parent=Msa0352330-mRNA-1
chr3_1 exon 21102052 21102100 21102052 ID=Msa0352330-mRNA-1:exon:4791;Parent=Msa0352330-mRNA-1
chr3_1 exon 21102211 21102277 21102211 ID=Msa0352330-mRNA-1:exon:4792;Parent=Msa0352330-mRNA-1
chr3_1 exon 21102806 21103279 21102806 ID=Msa0352330-mRNA-1:exon:4793;Parent=Msa0352330-mRNA-1
chr3_1 five_prime_UTR 21093453 21093614 21093453 ID=Msa0352330-mRNA-1:five_prime_utr;Parent=Msa0352330-mRNA-1
chr3_1 five_prime_UTR 21093637 21093698 21093637 ID=Msa0352330-mRNA-1:five_prime_utr;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21093699 21093767 21093699 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21093870 21093963 21093870 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21094818 21094904 21094818 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21095119 21095201 21095119 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21095801 21095884 21095801 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21096010 21096048 21096010 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21096716 21096805 21096716 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21097272 21097322 21097272 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21097408 21097495 21097408 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21097608 21097672 21097608 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21098435 21098507 21098435 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21099161 21099252 21099161 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21099353 21099424 21099353 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21101909 21101965 21101909 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21102052 21102100 21102052 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21102211 21102277 21102211 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 CDS 21102806 21102905 21102806 ID=Msa0352330-mRNA-1:cds;Parent=Msa0352330-mRNA-1
chr3_1 three_prime_UTR 21102906 21103279 21102906 ID=Msa0352330-mRNA-1:three_prime_utr;Parent=Msa0352330-mRNA-1
Gene Sequence

>Msa0352330

ATGGTTCGCTCCAATGGCGTCAAGCTTCTTCTTCGTTCTCTGTCCCCTAATCTCCTCCGCAACAAATCTGTATATGAAGGAGTGTTACAAAGGGGATATAGGACATTGAATTCAGGATTATGCAATCGTTCTTCCAAAGTTACTGGAAATTATTTTCACAATGTTGGAGATGGTGTTAAATTGAAGAACTGGGTGCTATTGGGAGCAGCAAATACTTATTTGGGGGCAACTAGATCCATTCATGGATCAGCACCATTGGCAAAGGACTTTTATGATGTTCTTGGAATCAGTAAGAATGCAAGTTCTTCTGAAATAAAGAAAGCATACTATGGGCTTGCAAAAAAGTTACATCCTGACACAAACAAAGATGATCCTGAAGCGGAAAAGAAATTTCAAGAAGTTTCAAGGGCATATGAGGTTTTGAAGGACGAGGAAAAGCGTCAAGAGTATGATCAGGTTGGCCATGAAGGTTTTGTAAACCGAGAAAATGGTTCTGGAGATGGTGGCTTTGGTCCCTTTGGAGGCGGTGGCTTTGGATTTAATCCTGATATTTTCCATGACCTCTTTAATCGGAACATTGGCGGACAGGATGTCAAGACTTTTGTTGAACTTTCCTTTATGGAAGCTGTCCGTGGATGCATCAAAACCATTACATTTCAAACAGATATGATTTGCAACACTTGTGGTGGGAGTGGGGTTCCTCCTGGTACAAGACCTGAAACCTGTAAGCGCTGTAAAGGGTCAGGAGTGAGTTTCTGCAAGTCATGCAAGGGTGCAAAGGTTACCAGAGCAACCAAGTCAGTTAAATTGGATATTATGGCTGGGATTGACAACAATGAAACCATTAAGGTTTACAAAAGTGGTGGTGCAGATCCCGAAGGAGATCGACCTGGTGATCTTTATGTTACTGTCAAGGTCAGAGAAGATCCTGTCTTCCGTAGAGAAGGATCGGATATTCATGTAGATACTGTTTTAAGCATCACTCAGGCCATTTTGGGCGGAACCATTCAGGTCCCAACTCTTACTGGGGATGTTGTTGTTAAGGTGCGTCCTGGAACACAACACGGTCAGAAGGTGGTTCTGAAACAGAAAGGGATCAAGACCAAAAAGTATAACTCATTAGGCAATCAATACGTTCATTTTAACGTCAGCATCCCAGTAAACCTGACAGATAGACAGCGGGAATTGATTGAAGAGTTTCAGAAAGAAGAGCAATATGAATCTTCCGATAAAGGAAAAGCTGCTTCGGCTTCTGGTTGA
Protein sequence

>Msa0352330

MVRSNGVKLLLRSLSPNLLRNKSVYEGVLQRGYRTLNSGLCNRSSKVTGNYFHNVGDGVKLKNWVLLGAANTYLGATRSIHGSAPLAKDFYDVLGISKNASSSEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSRAYEVLKDEEKRQEYDQVGHEGFVNRENGSGDGGFGPFGGGGFGFNPDIFHDLFNRNIGGQDVKTFVELSFMEAVRGCIKTITFQTDMICNTCGGSGVPPGTRPETCKRCKGSGVSFCKSCKGAKVTRATKSVKLDIMAGIDNNETIKVYKSGGADPEGDRPGDLYVTVKVREDPVFRREGSDIHVDTVLSITQAILGGTIQVPTLTGDVVVKVRPGTQHGQKVVLKQKGIKTKKYNSLGNQYVHFNVSIPVNLTDRQRELIEEFQKEEQYESSDKGKAASASG*