AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0181430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 188 sgRNAs with CRISPR-Local

Find 431 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTGGTTCTTTGTGCAATT+TGG 0.077562 1_4:+69646121 None:intergenic
GTCTTCCGGTTTCATAAAAT+TGG 0.103009 1_4:+69650760 None:intergenic
AAAACCACTGTATCAATTTC+TGG 0.125076 1_4:+69646149 None:intergenic
CAATTTCTGGTTTAGGTTTC+CGG 0.152003 1_4:+69646162 None:intergenic
CGAGAATATTGAACAACTTT+TGG 0.177844 1_4:+69648550 None:intergenic
CCTTTCTCAGGCCTCATTCT+AGG 0.189935 1_4:+69645438 None:intergenic
TGTCGGTGCAAAGTAATTTA+AGG 0.194876 1_4:-69645809 Msa0181430:three_prime_UTR
TTTATGCCTTCTGTAATTAA+TGG 0.195529 1_4:+69650248 None:intergenic
GAACAACTTTGCAGAGAATT+TGG 0.199533 1_4:-69646006 Msa0181430:three_prime_UTR
CTGGTTCCATTTCCATATTT+TGG 0.207098 1_4:+69646209 None:intergenic
ACCTCTGCGGATAAATTAAT+TGG 0.209372 1_4:+69645303 None:intergenic
CAGGGCTGGTTTCTCCCTTT+TGG 0.236355 1_4:-69648715 Msa0181430:intron
TCAAATAGGGTTTGTGCATT+AGG 0.245604 1_4:-69645197 Msa0181430:three_prime_UTR
CCTCCTCCACCAGCAGCTTC+TGG 0.246352 1_4:+69647288 None:intergenic
TCTGGTTCTTTGTGCAATTT+GGG 0.246471 1_4:+69646122 None:intergenic
AAGCCTTCTGAATCTGCTTT+TGG 0.247089 1_4:+69645732 None:intergenic
ACAATAGTACGTTGCGTCTT+AGG 0.249510 1_4:+69646284 None:intergenic
GCTTCTCCTGACCAATATTC+TGG 0.255812 1_4:+69645979 None:intergenic
TGAAAGGAGTCAGGTTTAAT+TGG 0.262890 1_4:+69645957 None:intergenic
CCGCCGATTTCAATTCTTTC+CGG 0.277649 1_4:-69651503 Msa0181430:CDS
TAAAGTTTCTTGGTTAGGTT+TGG 0.278322 1_4:-69650826 Msa0181430:CDS
GAAAATGGCATAGAAGTTAA+AGG 0.285683 1_4:-69646590 Msa0181430:three_prime_UTR
TCAGGAGTCACTCCAAAATA+TGG 0.289770 1_4:-69646221 Msa0181430:three_prime_UTR
CTCAGGCCTCATTCTAGGTT+TGG 0.291161 1_4:+69645443 None:intergenic
ACCTAACCAAGAAACTTTAC+AGG 0.297649 1_4:+69650830 None:intergenic
TCTACACCTTCATTGGTGTC+TGG 0.300627 1_4:+69646479 None:intergenic
AACCCATGAGTTTCTGAATC+AGG 0.303082 1_4:+69645504 None:intergenic
TTTCTTGCTAGAGCAGAAAT+TGG 0.306159 1_4:-69648409 Msa0181430:intron
GGGAATCCTGTAAAGTTTCT+TGG 0.313305 1_4:-69650836 Msa0181430:CDS
TTTAGTAGTTGAACCTTTGC+AGG 0.320130 1_4:+69650309 None:intergenic
TTATGCCTTCTGTAATTAAT+GGG 0.334508 1_4:+69650249 None:intergenic
ACTGTATCAATTTCTGGTTT+AGG 0.337996 1_4:+69646155 None:intergenic
TTACAGACAAGCTGAGGCTT+TGG 0.343221 1_4:-69646669 Msa0181430:intron
GATGGAGGCAATATGGGTTA+TGG 0.344239 1_4:-69645774 Msa0181430:three_prime_UTR
ATTAAACCTGACTCCTTTCA+TGG 0.345827 1_4:-69645954 Msa0181430:three_prime_UTR
GCGAGGGACCAACTTGAAAA+TGG 0.348958 1_4:-69646605 Msa0181430:three_prime_UTR
GATGGAGAGGCTGGAAAGAT+TGG 0.351412 1_4:-69648465 Msa0181430:three_prime_UTR
AAGGAAAACGATAGAGAAAA+TGG 0.352524 1_4:+69651542 None:intergenic
TTCCTTTCCTTTCCTAGGGC+TGG 0.354526 1_4:-69650686 Msa0181430:three_prime_UTR
TCGTGAGTCTTAACTTCATC+TGG 0.355533 1_4:+69646104 None:intergenic
CTTCTGGCATTTCAATGCTT+CGG 0.356524 1_4:+69647304 None:intergenic
AATTTGGCAAACCAGAATAT+TGG 0.361607 1_4:-69645990 Msa0181430:three_prime_UTR
TGATATAGATGGAGGCAATA+TGG 0.363484 1_4:-69645781 Msa0181430:three_prime_UTR
AAGCAGATTCAGAAGGCTTT+CGG 0.365566 1_4:-69645728 Msa0181430:three_prime_UTR
GGAAGACGGAAATGATTCTT+TGG 0.374474 1_4:-69650744 Msa0181430:three_prime_UTR
TTAAGGTTGTGTGATATAGA+TGG 0.376966 1_4:-69645792 Msa0181430:three_prime_UTR
AAAGTTTCTTGGTTAGGTTT+GGG 0.380396 1_4:-69650825 Msa0181430:CDS
ATCAGTCAGGAGTTAAGCTT+TGG 0.382056 1_4:-69645923 Msa0181430:three_prime_UTR
ATCGCCAGAGGAACCATCTT+TGG 0.386656 1_4:-69646540 Msa0181430:three_prime_UTR
TTCCTAGGGCTGGTGGTGAC+AGG 0.386737 1_4:-69650676 Msa0181430:three_prime_UTR
AATGCTTTCCAGGAGGTTCC+AGG 0.387639 1_4:-69648810 Msa0181430:intron
AAACTTACTTTGTGCAAGAA+AGG 0.392052 1_4:+69645683 None:intergenic
ATCGATTGGAAGGGACGATC+CGG 0.393222 1_4:+69651484 None:intergenic
ATCTTCATCTACACCTTCAT+TGG 0.394133 1_4:+69646472 None:intergenic
TTTATCTTGATTCCTTTCTC+AGG 0.400060 1_4:+69645426 None:intergenic
ATTCATTTGGCAGAAATTCC+AGG 0.405266 1_4:-69650348 Msa0181430:intron
TAGAAGAAACAAAGAAGTAG+TGG 0.406278 1_4:-69645371 Msa0181430:three_prime_UTR
ATGGAGGCAATATGGGTTAT+GGG 0.409471 1_4:-69645773 Msa0181430:three_prime_UTR
AAAGAATCATTTCCGTCTTC+CGG 0.410730 1_4:+69650746 None:intergenic
GTCACTCCAAAATATGGAAA+TGG 0.411876 1_4:-69646215 Msa0181430:three_prime_UTR
TCCTGTAAAGTTTCTTGGTT+AGG 0.415855 1_4:-69650831 Msa0181430:CDS
TGAACAAAACTCTCTGTCTT+TGG 0.421485 1_4:+69650272 None:intergenic
GTTATGATTGTGACACTAAT+CGG 0.424357 1_4:-69646376 Msa0181430:three_prime_UTR
TTTAGGGGCATATTGGGATA+AGG 0.425758 1_4:-69650028 Msa0181430:intron
ATTGTAGTAGTCGTAGTAGT+AGG 0.428061 1_4:+69651608 None:intergenic
GCCGTGATAGTGGTAAAGTT+TGG 0.430539 1_4:-69646187 Msa0181430:three_prime_UTR
CTTAGGATGCCTTAGCCGTC+TGG 0.433778 1_4:+69646301 None:intergenic
TGACAAGATTATTCTCTGAT+TGG 0.442959 1_4:+69646039 None:intergenic
AACCATTCCTTTCCTTTCCT+AGG 0.443817 1_4:-69650691 Msa0181430:three_prime_UTR
TTAGTTTCATGCTGGCTCAC+TGG 0.444350 1_4:+69645897 None:intergenic
AATGCACAAACCCTATTTGA+AGG 0.448831 1_4:+69645200 None:intergenic
AGAATTGAAATCGGCGGCGT+AGG 0.451596 1_4:+69651509 None:intergenic
TCTTCCGGTTTCATAAAATT+GGG 0.452669 1_4:+69650761 None:intergenic
ATGGAGAGGCTGGAAAGATT+GGG 0.452673 1_4:-69648464 Msa0181430:three_prime_UTR
ACTACTACGACTACTACAAT+AGG 0.453527 1_4:-69651605 Msa0181430:CDS
TTGCCTCCATGAAAGGAGTC+AGG 0.453534 1_4:+69645948 None:intergenic
CCAGAAGCTGCTGGTGGAGG+AGG 0.458809 1_4:-69647288 Msa0181430:three_prime_UTR
GAATTGAAATCGGCGGCGTA+GGG 0.458949 1_4:+69651510 None:intergenic
GATATAGATGGAGGCAATAT+GGG 0.459827 1_4:-69645780 Msa0181430:three_prime_UTR
GAAGCTGCTGGTGGAGGAGG+AGG 0.460524 1_4:-69647285 Msa0181430:three_prime_UTR
AACTCTCAAAAGTCTAAGTC+AGG 0.461546 1_4:-69646239 Msa0181430:three_prime_UTR
CCACAGTATTATCTCAGGGC+TGG 0.465461 1_4:-69648729 Msa0181430:three_prime_UTR
TGCAGGATATTGTTCAATCC+AGG 0.466123 1_4:-69648596 Msa0181430:intron
GTCTCAACACTTTGAAGTGG+TGG 0.466490 1_4:+69645870 None:intergenic
TGTAGGACTCTAAGATAAGT+AGG 0.466846 1_4:-69650056 Msa0181430:intron
AAAATGGCATAGAAGTTAAA+GGG 0.467666 1_4:-69646589 Msa0181430:three_prime_UTR
GCCTCTGTTCTCTCCTGCAA+AGG 0.470371 1_4:-69650322 Msa0181430:three_prime_UTR
TATAGGAAAACTAGAAGGCC+TGG 0.471838 1_4:+69648578 None:intergenic
AGCAATATTTCTTACCAAAA+GGG 0.473884 1_4:+69648701 None:intergenic
ACCATTCCTTTCCTTTCCTA+GGG 0.476231 1_4:-69650690 Msa0181430:three_prime_UTR
AAATTTGATCATCATTTCCA+TGG 0.478816 1_4:+69645832 None:intergenic
GTCATTTGAGAATGTGATGT+TGG 0.480349 1_4:-69649690 Msa0181430:three_prime_UTR
GGCAAACCAGAATATTGGTC+AGG 0.480574 1_4:-69645985 Msa0181430:three_prime_UTR
TTCCAATCGGATGCACAGTC+AGG 0.483165 1_4:-69646398 Msa0181430:three_prime_UTR
CTACACCTTCATTGGTGTCT+GGG 0.483294 1_4:+69646480 None:intergenic
GCTTAGGCTTAAAGAACAAA+AGG 0.490968 1_4:-69646627 Msa0181430:three_prime_UTR
CTTTCCTTTCCTAGGGCTGG+TGG 0.493616 1_4:-69650683 Msa0181430:three_prime_UTR
GAGGCAGTAAGTTTCGCAAC+TGG 0.493809 1_4:+69650791 None:intergenic
AACTTTACCACTATCACGGC+TGG 0.497031 1_4:+69646190 None:intergenic
CGGCGTAGGGATTGAGAAGA+AGG 0.497610 1_4:+69651523 None:intergenic
CTACAATAGGTGCAGCGTGC+AGG 0.498154 1_4:-69651592 Msa0181430:CDS
GATGTTGCACAATCCTTGAC+TGG 0.499002 1_4:+69645477 None:intergenic
CGAGAGAGGAAGAGATCGAT+TGG 0.499954 1_4:+69651470 None:intergenic
ACGCAACGTACTATTGTCAA+TGG 0.500270 1_4:-69646278 Msa0181430:three_prime_UTR
CAAACCCTATTTGAAGGAAA+AGG 0.502106 1_4:+69645206 None:intergenic
GCAGCCAAAGATGGTTCCTC+TGG 0.504545 1_4:+69646536 None:intergenic
AGGAGGAAGCTGCTCAAAGA+AGG 0.509595 1_4:-69647268 Msa0181430:intron
CACCTGATTCAGAAACTCAT+GGG 0.512560 1_4:-69645506 Msa0181430:three_prime_UTR
AACCTGACTGTGCATCCGAT+TGG 0.515863 1_4:+69646396 None:intergenic
CCTAGAATGAGGCCTGAGAA+AGG 0.517114 1_4:-69645438 Msa0181430:three_prime_UTR
TCACCTGATTCAGAAACTCA+TGG 0.517154 1_4:-69645507 Msa0181430:three_prime_UTR
TTTCATAAAATTGGGAGTAC+CGG 0.520359 1_4:+69650769 None:intergenic
AATGGAACCAGCCGTGATAG+TGG 0.523832 1_4:-69646197 Msa0181430:three_prime_UTR
CAATGGTTGCCAGACGGCTA+AGG 0.524079 1_4:-69646310 Msa0181430:three_prime_UTR
ATGGGAACAAATCTCACGTC+GGG 0.524173 1_4:-69645755 Msa0181430:three_prime_UTR
CATGGAGGCAACAATCAGTC+AGG 0.524598 1_4:-69645936 Msa0181430:three_prime_UTR
AGAAACTTGTGCAAGCAACT+AGG 0.527314 1_4:+69648427 None:intergenic
AAGTCACATGCAGCCAAAGA+TGG 0.527424 1_4:+69646527 None:intergenic
AGCAATTTCGTCACATCATG+TGG 0.528470 1_4:-69645541 Msa0181430:three_prime_UTR
GAAGATATAGGAAAACTAGA+AGG 0.531281 1_4:+69648573 None:intergenic
AGAGGAAGAGATCGATTGGA+AGG 0.534158 1_4:+69651474 None:intergenic
GCCAATTAATTTATCCGCAG+AGG 0.536506 1_4:-69645304 Msa0181430:three_prime_UTR
GTTCACCCATTAATTACAGA+AGG 0.542398 1_4:-69650254 Msa0181430:three_prime_UTR
CTGATTGTTGCCTCCATGAA+AGG 0.543496 1_4:+69645941 None:intergenic
CCTATTTGAAGGAAAAGGAC+AGG 0.547378 1_4:+69645211 None:intergenic
TTGTAGTAGTCGTAGTAGTA+GGG 0.553616 1_4:+69651609 None:intergenic
TGTGTAGCTCTCTGTAGAAG+AGG 0.554214 1_4:-69649726 Msa0181430:intron
TTCATTTGGCAGAAATTCCA+GGG 0.554733 1_4:-69650347 Msa0181430:intron
ACAGAAGTTGACGTAGTCCA+TGG 0.555082 1_4:-69645849 Msa0181430:three_prime_UTR
ATGCCAGAAGCTGCTGGTGG+AGG 0.559726 1_4:-69647291 Msa0181430:three_prime_UTR
GATCCGGAAAGAATTGAAAT+CGG 0.562443 1_4:+69651500 None:intergenic
GCTCTCTGTAGAAGAGGCAA+AGG 0.564425 1_4:-69649720 Msa0181430:three_prime_UTR
GTAGGACTCTAAGATAAGTA+GGG 0.565142 1_4:-69650055 Msa0181430:intron
AGAAGAAACAAAGAAGTAGT+GGG 0.565615 1_4:-69645370 Msa0181430:three_prime_UTR
CATTGCCCAGACACCAATGA+AGG 0.565931 1_4:-69646485 Msa0181430:three_prime_UTR
GTTGCGAAACTTACTGCCTC+CGG 0.571425 1_4:-69650788 Msa0181430:three_prime_UTR
GGAGAGAACAGAGGCCACCC+TGG 0.571933 1_4:+69650330 None:intergenic
AATAATTGAATCCACTGTGC+TGG 0.572644 1_4:+69650653 None:intergenic
GGCATAAACGTGTACACCAT+CGG 0.580800 1_4:-69650233 Msa0181430:three_prime_UTR
GGCCTGTCACCACCAGCCCT+AGG 0.584313 1_4:+69650674 None:intergenic
GGAGCCACAGACATTCCAAT+CGG 0.584540 1_4:-69646411 Msa0181430:three_prime_UTR
ATGCTTTCCAGGAGGTTCCA+GGG 0.584824 1_4:-69648809 Msa0181430:intron
TCTGTCTCAACACTTTGAAG+TGG 0.585570 1_4:+69645867 None:intergenic
CTAAATCCAAACCTAGAATG+AGG 0.586238 1_4:-69645449 Msa0181430:three_prime_UTR
AGGTTGTGTGATATAGATGG+AGG 0.593933 1_4:-69645789 Msa0181430:three_prime_UTR
ATTGAAATGCCAGAAGCTGC+TGG 0.594331 1_4:-69647297 Msa0181430:three_prime_UTR
TCTGTCAGGAAATTGAAGGT+AGG 0.597041 1_4:-69645259 Msa0181430:three_prime_UTR
CATAAAATTGGGAGTACCGG+AGG 0.599078 1_4:+69650772 None:intergenic
TCATGGGTTCAAACCAGTCA+AGG 0.600323 1_4:-69645490 Msa0181430:three_prime_UTR
TCAACTCTTCGAACACAACA+AGG 0.602015 1_4:-69648765 Msa0181430:three_prime_UTR
ATAGTGGTAAAGTTTGGAGC+CGG 0.606698 1_4:-69646181 Msa0181430:three_prime_UTR
GGCTTAAAGAACAAAAGGCG+AGG 0.606871 1_4:-69646622 Msa0181430:three_prime_UTR
TCCAAACTTTACCACTATCA+CGG 0.608024 1_4:+69646186 None:intergenic
AGTCAAGGATTGTGCAACAT+CGG 0.610059 1_4:-69645475 Msa0181430:three_prime_UTR
ATTCAACGGCCTAAAATGAA+AGG 0.611002 1_4:-69651788 None:intergenic
ATTTATTTACAGACAAGCTG+AGG 0.611059 1_4:-69646675 Msa0181430:intron
GCCCTAGGAAAGGAAAGGAA+TGG 0.614272 1_4:+69650689 None:intergenic
TAAACCAGAAATTGATACAG+TGG 0.614991 1_4:-69646153 Msa0181430:three_prime_UTR
GTCACCACCAGCCCTAGGAA+AGG 0.616240 1_4:+69650679 None:intergenic
AATGAGATGACGTACGAGAG+AGG 0.618981 1_4:+69651456 None:intergenic
GGATACATTGATAAGACAAG+CGG 0.623294 1_4:-69650723 Msa0181430:three_prime_UTR
CACCAGCCCTAGGAAAGGAA+AGG 0.626418 1_4:+69650684 None:intergenic
TCATAATCCTCGACGCACAA+TGG 0.626814 1_4:-69646327 Msa0181430:three_prime_UTR
ATTTGAGAATGTGATGTTGG+AGG 0.627772 1_4:-69649687 Msa0181430:intron
CATGCTTTAGAACAGCAACA+AGG 0.632194 1_4:-69650629 Msa0181430:intron
AAAGGGTGCATCAGAAACAC+AGG 0.634148 1_4:-69646572 Msa0181430:three_prime_UTR
GACGCACAATGGTTGCCAGA+CGG 0.637366 1_4:-69646316 Msa0181430:three_prime_UTR
AATAGGTGCAGCGTGCAGGA+AGG 0.639418 1_4:-69651588 Msa0181430:CDS
GAGGAAGAGATCGATTGGAA+GGG 0.639523 1_4:+69651475 None:intergenic
GCTTAAAGAACAAAAGGCGA+GGG 0.639528 1_4:-69646621 Msa0181430:three_prime_UTR
ACATTGATAAGACAAGCGGT+TGG 0.640269 1_4:-69650719 Msa0181430:three_prime_UTR
CTGGCAACCATTGTGCGTCG+AGG 0.640552 1_4:+69646320 None:intergenic
CTTTCACATAGGTAAAGGCG+TGG 0.647669 1_4:-69647343 Msa0181430:intron
GGGCCAAAAGCAGATTCAGA+AGG 0.649820 1_4:-69645735 Msa0181430:three_prime_UTR
GCTTGTACAATTGAAGACCC+TGG 0.657586 1_4:+69648792 None:intergenic
GTGCATCAGAAACACAGGAG+AGG 0.672991 1_4:-69646567 Msa0181430:three_prime_UTR
GCATCCGATTGGAATGTCTG+TGG 0.681947 1_4:+69646407 None:intergenic
GTGGTGACAGGCCAGCACAG+TGG 0.685473 1_4:-69650664 Msa0181430:three_prime_UTR
CCGGAAAGAATTGAAATCGG+CGG 0.685741 1_4:+69651503 None:intergenic
TATGGGAACAAATCTCACGT+CGG 0.688700 1_4:-69645756 Msa0181430:three_prime_UTR
GAAATGCCAGAAGCTGCTGG+TGG 0.694123 1_4:-69647294 Msa0181430:three_prime_UTR
AAACCTGACTCCTTTCATGG+AGG 0.702374 1_4:-69645951 Msa0181430:three_prime_UTR
ACCTTTGCAGGAGAGAACAG+AGG 0.703630 1_4:+69650321 None:intergenic
AGGAGAGGAGATATCGCCAG+AGG 0.716215 1_4:-69646552 Msa0181430:three_prime_UTR
ATTTGGCAGAAATTCCAGGG+TGG 0.736950 1_4:-69650344 Msa0181430:intron
CCAGCCCTGAGATAATACTG+TGG 0.746348 1_4:+69648729 None:intergenic
GAAAACGATAGAGAAAATGG+CGG 0.754096 1_4:+69651545 None:intergenic
TTGTGACACTGATCAGAACG+TGG 0.764373 1_4:-69646432 Msa0181430:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG - chr1_4:69647627-69647646 Msa0181430:intron 0.0%
!! AAATACATATAAAAATAGAA+AGG + chr1_4:69645613-69645632 None:intergenic 10.0%
!!! AATGATTTTAGTTTTAATTA+AGG + chr1_4:69646381-69646400 None:intergenic 10.0%
!! ATTATATCAGAAAAAAAATT+TGG + chr1_4:69646520-69646539 None:intergenic 10.0%
!! AATATATTTAGATTAATTAG+GGG + chr1_4:69648039-69648058 None:intergenic 10.0%
!! CAATATATTTAGATTAATTA+GGG + chr1_4:69648040-69648059 None:intergenic 10.0%
!! ACAATATATTTAGATTAATT+AGG + chr1_4:69648041-69648060 None:intergenic 10.0%
!! GAAAAATATTTACTATAAAA+GGG + chr1_4:69648540-69648559 None:intergenic 10.0%
!! AGAAAAATATTTACTATAAA+AGG + chr1_4:69648541-69648560 None:intergenic 10.0%
!!! TAAATTAATCAATTTTTAGG+TGG + chr1_4:69645228-69645247 None:intergenic 15.0%
!!! ATTGCAATAATAAGAAATTT+TGG - chr1_4:69646288-69646307 Msa0181430:three_prime_UTR 15.0%
!!! ATTTTAGTTTTAATTAAGGA+AGG + chr1_4:69646377-69646396 None:intergenic 15.0%
!! GATATAATATTTGATTCATT+TGG - chr1_4:69646532-69646551 Msa0181430:three_prime_UTR 15.0%
!!! TCTTTATTTTTTTTCAAACT+CGG - chr1_4:69648850-69648869 Msa0181430:intron 15.0%
!! AGATTTCTATTCTATATTAT+TGG - chr1_4:69649013-69649032 Msa0181430:intron 15.0%
!! AACAAAATACGATTAAATAT+GGG + chr1_4:69649159-69649178 None:intergenic 15.0%
!! TTTAAATAATTGTCATGAAA+AGG - chr1_4:69649180-69649199 Msa0181430:intron 15.0%
!! GAATAATATTTCAATATCTA+AGG - chr1_4:69649308-69649327 Msa0181430:intron 15.0%
!! AAAATATTTCAAGAGTTAAT+TGG - chr1_4:69649718-69649737 Msa0181430:three_prime_UTR 15.0%
!! AAATATTTCAAGAGTTAATT+GGG - chr1_4:69649719-69649738 Msa0181430:three_prime_UTR 15.0%
!!! ACTTTCTTGTAATTTTTAAT+AGG - chr1_4:69649895-69649914 Msa0181430:intron 15.0%
!!! AATTTTTAATAGGTGAAATA+AGG - chr1_4:69649905-69649924 Msa0181430:intron 15.0%
!!! ATTTTTAATAGGTGAAATAA+GGG - chr1_4:69649906-69649925 Msa0181430:intron 15.0%
!! GAAAATTGATATGTATAAAT+TGG + chr1_4:69651238-69651257 None:intergenic 15.0%
!!! TACTGTATCTTTTTTATTAG+AGG + chr1_4:69645196-69645215 None:intergenic 20.0%
!! TATAAAAATTATGGTTCGTT+TGG - chr1_4:69645830-69645849 Msa0181430:three_prime_UTR 20.0%
!! ATGAACAAAAAAGAAATGTT+AGG + chr1_4:69645988-69646007 None:intergenic 20.0%
!! ATCAGAAAAAAAATTTGGTT+TGG + chr1_4:69646515-69646534 None:intergenic 20.0%
!!! TACAATATATAAGAAGCATT+AGG + chr1_4:69646821-69646840 None:intergenic 20.0%
!! TAATGCTTCTTATATATTGT+AGG - chr1_4:69646820-69646839 Msa0181430:intron 20.0%
!!! CAATTTTACATATATGAAGA+AGG - chr1_4:69646905-69646924 Msa0181430:intron 20.0%
!! AAATAAGATGTATTCTTCAT+AGG + chr1_4:69647111-69647130 None:intergenic 20.0%
!! TTTATTAGCATAAATGAAAG+TGG - chr1_4:69647327-69647346 Msa0181430:three_prime_UTR 20.0%
!! TTATTAGCATAAATGAAAGT+GGG - chr1_4:69647328-69647347 Msa0181430:three_prime_UTR 20.0%
!! AAATCATATTCACATTGAAA+AGG + chr1_4:69647543-69647562 None:intergenic 20.0%
!! GGGTGTTTATATATATATAT+GGG + chr1_4:69647877-69647896 None:intergenic 20.0%
!! TGGGTGTTTATATATATATA+TGG + chr1_4:69647878-69647897 None:intergenic 20.0%
!!! AATTGAAAGTTTTTCAAAGA+CGG - chr1_4:69647932-69647951 Msa0181430:intron 20.0%
!!! AGTGAAAATACATTTTTATG+TGG - chr1_4:69648374-69648393 Msa0181430:intron 20.0%
!! ATCTTGCATGATAATAATAT+CGG - chr1_4:69648719-69648738 Msa0181430:three_prime_UTR 20.0%
!!! GTGTATAATTTGTTATTCTA+TGG - chr1_4:69648742-69648761 Msa0181430:three_prime_UTR 20.0%
!! ATTATTGGCATAATAGTATT+AGG - chr1_4:69649028-69649047 Msa0181430:intron 20.0%
!! ACAAAATACGATTAAATATG+GGG + chr1_4:69649158-69649177 None:intergenic 20.0%
!! GAACAAAATACGATTAAATA+TGG + chr1_4:69649160-69649179 None:intergenic 20.0%
!! ATATAATAACAAAACTAGTG+TGG - chr1_4:69649934-69649953 Msa0181430:intron 20.0%
!! CTTGTCTGTAAATAAATAAA+GGG + chr1_4:69650215-69650234 None:intergenic 20.0%
!!! AAATGATGATCAAATTTTGT+CGG - chr1_4:69651067-69651086 Msa0181430:intron 20.0%
!! GAATCTAAGATTAATCGATA+AGG - chr1_4:69645677-69645696 Msa0181430:intron 25.0%
!! TACTATTTTCTATTTTGTGC+AGG - chr1_4:69646035-69646054 Msa0181430:three_prime_UTR 25.0%
!! ACTATTTTCTATTTTGTGCA+GGG - chr1_4:69646036-69646055 Msa0181430:three_prime_UTR 25.0%
! TGTTTGAATTGAACATTTCT+CGG - chr1_4:69646322-69646341 Msa0181430:three_prime_UTR 25.0%
! TTATGCCTTCTGTAATTAAT+GGG + chr1_4:69646647-69646666 None:intergenic 25.0%
! TTTATGCCTTCTGTAATTAA+TGG + chr1_4:69646648-69646667 None:intergenic 25.0%
!! CTTTATATCTCATAAGTTGA+AGG - chr1_4:69646706-69646725 Msa0181430:intron 25.0%
! AAGTAAACATGAAAATACAC+TGG + chr1_4:69646773-69646792 None:intergenic 25.0%
! TATTAGCATAAATGAAAGTG+GGG - chr1_4:69647329-69647348 Msa0181430:three_prime_UTR 25.0%
! AAAAGTGAGTATGTGAAAAA+GGG + chr1_4:69647397-69647416 None:intergenic 25.0%
! TAAAAGTGAGTATGTGAAAA+AGG + chr1_4:69647398-69647417 None:intergenic 25.0%
! TTTAATCTTTCAACAAACAG+AGG + chr1_4:69647516-69647535 None:intergenic 25.0%
!! TCTGTTTGTTGAAAGATTAA+AGG - chr1_4:69647515-69647534 Msa0181430:intron 25.0%
! GCAAAGTTATAACTAAAAAG+TGG + chr1_4:69647755-69647774 None:intergenic 25.0%
! TCACCTTCATAAAAATTAGT+TGG - chr1_4:69647781-69647800 Msa0181430:intron 25.0%
!! ACACCAACTAATTTTTATGA+AGG + chr1_4:69647787-69647806 None:intergenic 25.0%
!!! TCATAGAATAACTTGCTAAA+AGG - chr1_4:69647821-69647840 Msa0181430:intron 25.0%
!!! ATTGAAAGTTTTTCAAAGAC+GGG - chr1_4:69647933-69647952 Msa0181430:intron 25.0%
! AAAACAATAAGAGCTGAAAA+GGG + chr1_4:69648001-69648020 None:intergenic 25.0%
! AGCAATATTTCTTACCAAAA+GGG + chr1_4:69648195-69648214 None:intergenic 25.0%
! TACATATCTACATTATTTGC+AGG - chr1_4:69648280-69648299 Msa0181430:intron 25.0%
!! GAGAATATTGAACAACTTTT+GGG + chr1_4:69648345-69648364 None:intergenic 25.0%
! TCTTGCATGATAATAATATC+GGG - chr1_4:69648720-69648739 Msa0181430:three_prime_UTR 25.0%
!!! TGACACTGATTTTATTGTTT+GGG - chr1_4:69648806-69648825 Msa0181430:intron 25.0%
! TATTGTTAGCTATGTACAAA+GGG - chr1_4:69648985-69649004 Msa0181430:intron 25.0%
! CAAAATACGATTAAATATGG+GGG + chr1_4:69649157-69649176 None:intergenic 25.0%
! AATATGCATCAGAATCATAT+AGG + chr1_4:69649345-69649364 None:intergenic 25.0%
! TAATGTTTGAATATGAACAG+AGG + chr1_4:69649484-69649503 None:intergenic 25.0%
! ATTGTTAACAGATGGAAAAA+TGG + chr1_4:69649785-69649804 None:intergenic 25.0%
! GCTTGTCTGTAAATAAATAA+AGG + chr1_4:69650216-69650235 None:intergenic 25.0%
! AAAATGGCATAGAAGTTAAA+GGG - chr1_4:69650304-69650323 Msa0181430:three_prime_UTR 25.0%
! AAATTTGATCATCATTTCCA+TGG + chr1_4:69651064-69651083 None:intergenic 25.0%
!!! TGTTTTATTGAAACTATGCA+TGG - chr1_4:69651269-69651288 Msa0181430:intron 25.0%
AAGGAAAACGATAGAGAAAA+TGG + chr1_4:69645354-69645373 None:intergenic 30.0%
AGAGATAAGCTTAAACATGT+AGG - chr1_4:69645585-69645604 Msa0181430:intron 30.0%
ATCTCTCAACATATCAAAGT+TGG + chr1_4:69645803-69645822 None:intergenic 30.0%
! CTATTTTCTATTTTGTGCAG+GGG - chr1_4:69646037-69646056 Msa0181430:three_prime_UTR 30.0%
TAAAGTTTCTTGGTTAGGTT+TGG - chr1_4:69646067-69646086 Msa0181430:three_prime_UTR 30.0%
AAAGTTTCTTGGTTAGGTTT+GGG - chr1_4:69646068-69646087 Msa0181430:three_prime_UTR 30.0%
! TTTCATAAAATTGGGAGTAC+CGG + chr1_4:69646127-69646146 None:intergenic 30.0%
! TACTCCCAATTTTATGAAAC+CGG - chr1_4:69646128-69646147 Msa0181430:three_prime_UTR 30.0%
TCTTCCGGTTTCATAAAATT+GGG + chr1_4:69646135-69646154 None:intergenic 30.0%
! AATTTTATGAAACCGGAAGA+CGG - chr1_4:69646135-69646154 Msa0181430:three_prime_UTR 30.0%
GTTTGAATTGAACATTTCTC+GGG - chr1_4:69646323-69646342 Msa0181430:three_prime_UTR 30.0%
GAATCAAATGTACTAGTAAC+GGG + chr1_4:69646493-69646512 None:intergenic 30.0%
GGAATCAAATGTACTAGTAA+CGG + chr1_4:69646494-69646513 None:intergenic 30.0%
! AAGATAAGTAGGGATCTTTT+AGG - chr1_4:69646848-69646867 Msa0181430:intron 30.0%
! AGATAAGTAGGGATCTTTTA+GGG - chr1_4:69646849-69646868 Msa0181430:intron 30.0%
TATGAAGAAGGCTAATTCTA+TGG - chr1_4:69646917-69646936 Msa0181430:intron 30.0%
GATAGGACTTATTGATCAAA+TGG + chr1_4:69646988-69647007 None:intergenic 30.0%
ATTAGCATAAATGAAAGTGG+GGG - chr1_4:69647330-69647349 Msa0181430:three_prime_UTR 30.0%
GTTCTTTCTAATCGTCATAT+TGG - chr1_4:69647477-69647496 Msa0181430:intron 30.0%
TGTATTATTTCCAGACAAGA+AGG + chr1_4:69647583-69647602 None:intergenic 30.0%
AAACAATAAGAGCTGAAAAG+GGG + chr1_4:69648000-69648019 None:intergenic 30.0%
GAAAACAATAAGAGCTGAAA+AGG + chr1_4:69648002-69648021 None:intergenic 30.0%
! TTTTCCACAGTATTATCTCA+GGG - chr1_4:69648160-69648179 Msa0181430:intron 30.0%
CAGCAATATTTCTTACCAAA+AGG + chr1_4:69648196-69648215 None:intergenic 30.0%
CAGCAAAAAACAAGAATGAA+TGG + chr1_4:69648232-69648251 None:intergenic 30.0%
! TTTTGCTGCACATATTCTTT+AGG - chr1_4:69648244-69648263 Msa0181430:intron 30.0%
GAAGATATAGGAAAACTAGA+AGG + chr1_4:69648323-69648342 None:intergenic 30.0%
!! AACAACTTTTGGGAAGATAT+AGG + chr1_4:69648335-69648354 None:intergenic 30.0%
! CGAGAATATTGAACAACTTT+TGG + chr1_4:69648346-69648365 None:intergenic 30.0%
!! ATGCAAAGACATGTTTTTGA+TGG - chr1_4:69648410-69648429 Msa0181430:three_prime_UTR 30.0%
AAGATTTATCTGCAATTCTC+AGG + chr1_4:69648704-69648723 None:intergenic 30.0%
!!! CTGACACTGATTTTATTGTT+TGG - chr1_4:69648805-69648824 Msa0181430:intron 30.0%
! ATTTGGTGAAGTCTCTTTAA+TGG + chr1_4:69648919-69648938 None:intergenic 30.0%
CTATTGTTAGCTATGTACAA+AGG - chr1_4:69648984-69649003 Msa0181430:intron 30.0%
! ATTCATTTTCCCTTTCTACT+CGG + chr1_4:69649285-69649304 None:intergenic 30.0%
! CTGATGCATATTCTCTTTTT+AGG - chr1_4:69649353-69649372 Msa0181430:intron 30.0%
ATGTGAATTTCCTTTCACAT+AGG - chr1_4:69649539-69649558 Msa0181430:intron 30.0%
ATTTCCTTTCACATAGGTAA+AGG - chr1_4:69649545-69649564 Msa0181430:intron 30.0%
!! TGAGTTTCATTTCCACTTTT+AGG - chr1_4:69649682-69649701 Msa0181430:intron 30.0%
AGACAAACATTGTTAACAGA+TGG + chr1_4:69649793-69649812 None:intergenic 30.0%
TCTGTTAACAATGTTTGTCT+TGG - chr1_4:69649793-69649812 Msa0181430:intron 30.0%
CTGTTAACAATGTTTGTCTT+GGG - chr1_4:69649794-69649813 Msa0181430:intron 30.0%
AAAACTAGTGTGGTAAGAAA+TGG - chr1_4:69649944-69649963 Msa0181430:intron 30.0%
!! TCAAAAAGTGCTAATGATGT+TGG - chr1_4:69650122-69650141 Msa0181430:intron 30.0%
TAGTTGTGAACTAGTCATTA+TGG - chr1_4:69650166-69650185 Msa0181430:intron 30.0%
ATTTATTTACAGACAAGCTG+AGG - chr1_4:69650218-69650237 Msa0181430:three_prime_UTR 30.0%
GAAAATGGCATAGAAGTTAA+AGG - chr1_4:69650303-69650322 Msa0181430:three_prime_UTR 30.0%
GTTATGATTGTGACACTAAT+CGG - chr1_4:69650517-69650536 Msa0181430:intron 30.0%
!! ACTTAGACTTTTGAGAGTTT+TGG + chr1_4:69650653-69650672 None:intergenic 30.0%
!! ACTGTATCAATTTCTGGTTT+AGG + chr1_4:69650741-69650760 None:intergenic 30.0%
TAAACCAGAAATTGATACAG+TGG - chr1_4:69650740-69650759 Msa0181430:three_prime_UTR 30.0%
AAAACCACTGTATCAATTTC+TGG + chr1_4:69650747-69650766 None:intergenic 30.0%
TGACAAGATTATTCTCTGAT+TGG + chr1_4:69650857-69650876 None:intergenic 30.0%
AATTTGGCAAACCAGAATAT+TGG - chr1_4:69650903-69650922 Msa0181430:intron 30.0%
TTAAGGTTGTGTGATATAGA+TGG - chr1_4:69651101-69651120 Msa0181430:intron 30.0%
AAACTTACTTTGTGCAAGAA+AGG + chr1_4:69651213-69651232 None:intergenic 30.0%
TTTATCTTGATTCCTTTCTC+AGG + chr1_4:69651470-69651489 None:intergenic 30.0%
TAGAAGAAACAAAGAAGTAG+TGG - chr1_4:69651522-69651541 Msa0181430:CDS 30.0%
AGAAGAAACAAAGAAGTAGT+GGG - chr1_4:69651523-69651542 Msa0181430:CDS 30.0%
! AGTAAAATTTTGAACCTCTG+CGG + chr1_4:69651606-69651625 None:intergenic 30.0%
! GAGGTTCAAAATTTTACTGA+CGG - chr1_4:69651608-69651627 Msa0181430:CDS 30.0%
AGGATCACAAAAATACTTTC+TGG + chr1_4:69651665-69651684 None:intergenic 30.0%
TACCTCAAAACATGATGTGA+TGG - chr1_4:69645128-69645147 Msa0181430:three_prime_UTR 35.0%
! TACCATCACATCATGTTTTG+AGG + chr1_4:69645133-69645152 None:intergenic 35.0%
TTGTAGTAGTCGTAGTAGTA+GGG + chr1_4:69645287-69645306 None:intergenic 35.0%
ATTGTAGTAGTCGTAGTAGT+AGG + chr1_4:69645288-69645307 None:intergenic 35.0%
ACTACTACGACTACTACAAT+AGG - chr1_4:69645288-69645307 Msa0181430:three_prime_UTR 35.0%
GAAAACGATAGAGAAAATGG+CGG + chr1_4:69645351-69645370 None:intergenic 35.0%
GATCCGGAAAGAATTGAAAT+CGG + chr1_4:69645396-69645415 None:intergenic 35.0%
! TTGAAAGATCTTGTTTGCTG+TGG - chr1_4:69645631-69645650 Msa0181430:intron 35.0%
TCTACAACGATTGTTGAGTT+TGG - chr1_4:69645757-69645776 Msa0181430:three_prime_UTR 35.0%
TGCAAAATGCTGCTAATTAC+TGG + chr1_4:69645863-69645882 None:intergenic 35.0%
ATGTAGTGACCTATGTTGTA+AGG - chr1_4:69645890-69645909 Msa0181430:three_prime_UTR 35.0%
GTACCACTATTTAACAACAC+TGG - chr1_4:69645961-69645980 Msa0181430:three_prime_UTR 35.0%
TCCTGTAAAGTTTCTTGGTT+AGG - chr1_4:69646062-69646081 Msa0181430:three_prime_UTR 35.0%
ACCTAACCAAGAAACTTTAC+AGG + chr1_4:69646066-69646085 None:intergenic 35.0%
GTCTTCCGGTTTCATAAAAT+TGG + chr1_4:69646136-69646155 None:intergenic 35.0%
AAAGAATCATTTCCGTCTTC+CGG + chr1_4:69646150-69646169 None:intergenic 35.0%
GGATACATTGATAAGACAAG+CGG - chr1_4:69646170-69646189 Msa0181430:three_prime_UTR 35.0%
AATAATTGAATCCACTGTGC+TGG + chr1_4:69646243-69646262 None:intergenic 35.0%
ATTGAACATTTCTCGGGTAT+TGG - chr1_4:69646329-69646348 Msa0181430:three_prime_UTR 35.0%
ATTAAGGAAGGCTAATCACA+TGG + chr1_4:69646365-69646384 None:intergenic 35.0%
TCAGTTACAAATGCAACGAT+AGG + chr1_4:69646414-69646433 None:intergenic 35.0%
ATTCATTTGGCAGAAATTCC+AGG - chr1_4:69646545-69646564 Msa0181430:three_prime_UTR 35.0%
TTCATTTGGCAGAAATTCCA+GGG - chr1_4:69646546-69646565 Msa0181430:three_prime_UTR 35.0%
TTTAGTAGTTGAACCTTTGC+AGG + chr1_4:69646587-69646606 None:intergenic 35.0%
TGAACAAAACTCTCTGTCTT+TGG + chr1_4:69646624-69646643 None:intergenic 35.0%
GTTCACCCATTAATTACAGA+AGG - chr1_4:69646639-69646658 Msa0181430:three_prime_UTR 35.0%
!!! TATCAAGCTTTTTCAACCGA+TGG + chr1_4:69646679-69646698 None:intergenic 35.0%
TCGGTTGAAAAAGCTTGATA+AGG - chr1_4:69646679-69646698 Msa0181430:intron 35.0%
!! AGAAGCATTAGGTCAAATTG+AGG + chr1_4:69646810-69646829 None:intergenic 35.0%
!! TGTAGGACTCTAAGATAAGT+AGG - chr1_4:69646837-69646856 Msa0181430:intron 35.0%
!! GTAGGACTCTAAGATAAGTA+GGG - chr1_4:69646838-69646857 Msa0181430:intron 35.0%
! GATAAGTAGGGATCTTTTAG+GGG - chr1_4:69646850-69646869 Msa0181430:intron 35.0%
AGGACTTATTGATCAAATGG+TGG + chr1_4:69646985-69647004 None:intergenic 35.0%
GCATCAAAGTGAGATATGAT+AGG + chr1_4:69647005-69647024 None:intergenic 35.0%
CATATCTCACTTTGATGCAA+TGG - chr1_4:69647007-69647026 Msa0181430:intron 35.0%
GTCATTTGAGAATGTGATGT+TGG - chr1_4:69647203-69647222 Msa0181430:intron 35.0%
ATTTGAGAATGTGATGTTGG+AGG - chr1_4:69647206-69647225 Msa0181430:intron 35.0%
TTAGCATAAATGAAAGTGGG+GGG - chr1_4:69647331-69647350 Msa0181430:three_prime_UTR 35.0%
TTGCTAAAAGACACCTTCAT+GGG + chr1_4:69647710-69647729 None:intergenic 35.0%
ATTGCTAAAAGACACCTTCA+TGG + chr1_4:69647711-69647730 None:intergenic 35.0%
!! CTAAAAGGCACCTTCATAAA+AGG - chr1_4:69647836-69647855 Msa0181430:intron 35.0%
! CTAGAAGACACCTTTTATGA+AGG + chr1_4:69647849-69647868 None:intergenic 35.0%
! CTTTTCCACAGTATTATCTC+AGG - chr1_4:69648159-69648178 Msa0181430:intron 35.0%
!! AAGACATGTTTTTGATGGAG+AGG - chr1_4:69648415-69648434 Msa0181430:three_prime_UTR 35.0%
TTTCTTGCTAGAGCAGAAAT+TGG - chr1_4:69648484-69648503 Msa0181430:three_prime_UTR 35.0%
!!! AGGGAAAAGTTTTTGAAGCT+AGG + chr1_4:69648521-69648540 None:intergenic 35.0%
! AAGAAGATTGATTCATCACC+AGG - chr1_4:69648673-69648692 Msa0181430:intron 35.0%
TGTTTGGGTATCTGTAAGTT+TGG - chr1_4:69648821-69648840 Msa0181430:intron 35.0%
TCATTATTCACTCTTCCCTT+TGG - chr1_4:69649058-69649077 Msa0181430:intron 35.0%
ATTAAATATGGGGGCAGAAA+GGG + chr1_4:69649148-69649167 None:intergenic 35.0%
AAGAAAAGAACCGAGTAGAA+AGG - chr1_4:69649272-69649291 Msa0181430:intron 35.0%
AGAAAAGAACCGAGTAGAAA+GGG - chr1_4:69649273-69649292 Msa0181430:intron 35.0%
GTAGAAAGGGAAAATGAATC+TGG - chr1_4:69649286-69649305 Msa0181430:intron 35.0%
ATGAAACTCATGAATCACAC+AGG + chr1_4:69649672-69649691 None:intergenic 35.0%
! GTGACTGGTAATGTAAAAGA+GGG + chr1_4:69649836-69649855 None:intergenic 35.0%
CCTAAATGTCCATTAAGTCA+AGG + chr1_4:69649858-69649877 None:intergenic 35.0%
! CCTTGACTTAATGGACATTT+AGG - chr1_4:69649855-69649874 Msa0181430:intron 35.0%
GAAAACGCTTGAAAAAGCTT+AGG - chr1_4:69650250-69650269 Msa0181430:three_prime_UTR 35.0%
GCTTAGGCTTAAAGAACAAA+AGG - chr1_4:69650266-69650285 Msa0181430:three_prime_UTR 35.0%
!!! CTTCTATGCCATTTTCAAGT+TGG + chr1_4:69650299-69650318 None:intergenic 35.0%
ATCTTCATCTACACCTTCAT+TGG + chr1_4:69650424-69650443 None:intergenic 35.0%
AACTCTCAAAAGTCTAAGTC+AGG - chr1_4:69650654-69650673 Msa0181430:three_prime_UTR 35.0%
GTCACTCCAAAATATGGAAA+TGG - chr1_4:69650678-69650697 Msa0181430:three_prime_UTR 35.0%
! CTGGTTCCATTTCCATATTT+TGG + chr1_4:69650687-69650706 None:intergenic 35.0%
TCCAAACTTTACCACTATCA+CGG + chr1_4:69650710-69650729 None:intergenic 35.0%
!! CAATTTCTGGTTTAGGTTTC+CGG + chr1_4:69650734-69650753 None:intergenic 35.0%
!! TCTGGTTCTTTGTGCAATTT+GGG + chr1_4:69650774-69650793 None:intergenic 35.0%
!! ATCTGGTTCTTTGTGCAATT+TGG + chr1_4:69650775-69650794 None:intergenic 35.0%
!! AAGACTCACGAAGTTTTGAT+TGG - chr1_4:69650801-69650820 Msa0181430:three_prime_UTR 35.0%
GAACAACTTTGCAGAGAATT+TGG - chr1_4:69650887-69650906 Msa0181430:intron 35.0%
TGAAAGGAGTCAGGTTTAAT+TGG + chr1_4:69650939-69650958 None:intergenic 35.0%
ATTAAACCTGACTCCTTTCA+TGG - chr1_4:69650939-69650958 Msa0181430:intron 35.0%
!!! GTGGATTTTTAGTTTCATGC+TGG + chr1_4:69651007-69651026 None:intergenic 35.0%
TGTCGGTGCAAAGTAATTTA+AGG - chr1_4:69651084-69651103 Msa0181430:intron 35.0%
TGATATAGATGGAGGCAATA+TGG - chr1_4:69651112-69651131 Msa0181430:intron 35.0%
GATATAGATGGAGGCAATAT+GGG - chr1_4:69651113-69651132 Msa0181430:intron 35.0%
TATTGAAACTATGCATGGCT+TGG - chr1_4:69651274-69651293 Msa0181430:intron 35.0%
! TCCACCAACAATTTTTATGC+AGG - chr1_4:69651320-69651339 Msa0181430:intron 35.0%
TCCTGCATAAAAATTGTTGG+TGG + chr1_4:69651324-69651343 None:intergenic 35.0%
CCATCCTGCATAAAAATTGT+TGG + chr1_4:69651327-69651346 None:intergenic 35.0%
! CCAACAATTTTTATGCAGGA+TGG - chr1_4:69651324-69651343 Msa0181430:intron 35.0%
CTAAATCCAAACCTAGAATG+AGG - chr1_4:69651444-69651463 Msa0181430:intron 35.0%
ACCTCTGCGGATAAATTAAT+TGG + chr1_4:69651593-69651612 None:intergenic 35.0%
! GTTTTCTGTCAGGAAATTGA+AGG - chr1_4:69651630-69651649 Msa0181430:intron 35.0%
! CTGTCCTTTTCCTTCAAATA+GGG - chr1_4:69651683-69651702 Msa0181430:intron 35.0%
CAAACCCTATTTGAAGGAAA+AGG + chr1_4:69651690-69651709 None:intergenic 35.0%
AATGCACAAACCCTATTTGA+AGG + chr1_4:69651696-69651715 None:intergenic 35.0%
TCAAATAGGGTTTGTGCATT+AGG - chr1_4:69651696-69651715 Msa0181430:intron 35.0%
! GGACCAGTGTTGTTAAATAG+TGG + chr1_4:69645967-69645986 None:intergenic 40.0%
GGGAATCCTGTAAAGTTTCT+TGG - chr1_4:69646057-69646076 Msa0181430:three_prime_UTR 40.0%
GGAAGACGGAAATGATTCTT+TGG - chr1_4:69646149-69646168 Msa0181430:three_prime_UTR 40.0%
ACATTGATAAGACAAGCGGT+TGG - chr1_4:69646174-69646193 Msa0181430:three_prime_UTR 40.0%
AACCATTCCTTTCCTTTCCT+AGG - chr1_4:69646202-69646221 Msa0181430:three_prime_UTR 40.0%
ACCATTCCTTTCCTTTCCTA+GGG - chr1_4:69646203-69646222 Msa0181430:three_prime_UTR 40.0%
!! CATGCTTTAGAACAGCAACA+AGG - chr1_4:69646264-69646283 Msa0181430:three_prime_UTR 40.0%
!! GGATCTTTTAGGGGCATATT+GGG - chr1_4:69646859-69646878 Msa0181430:intron 40.0%
! TTTAGGGGCATATTGGGATA+AGG - chr1_4:69646865-69646884 Msa0181430:intron 40.0%
GTGGAAAATTAATGTGTGCG+TGG + chr1_4:69646966-69646985 None:intergenic 40.0%
ATCTCACTTTGATGCAATGG+TGG - chr1_4:69647010-69647029 Msa0181430:intron 40.0%
TGGTGGAACTTATTGATCCA+AGG - chr1_4:69647027-69647046 Msa0181430:intron 40.0%
GGTGGAACTTATTGATCCAA+GGG - chr1_4:69647028-69647047 Msa0181430:intron 40.0%
GGTGAAAACAGACTTGTGAA+TGG - chr1_4:69647049-69647068 Msa0181430:intron 40.0%
CTATTGTGCAGAAGTGAAGT+AGG + chr1_4:69647082-69647101 None:intergenic 40.0%
ATATGACCATTACGTGTGCA+AGG + chr1_4:69647296-69647315 None:intergenic 40.0%
TTTCCAGACAAGAAGGACAA+AGG + chr1_4:69647576-69647595 None:intergenic 40.0%
! TTTTAGCAATCCACACCTCA+AGG - chr1_4:69647721-69647740 Msa0181430:intron 40.0%
AAAGTGGAAATCACACCTTG+AGG + chr1_4:69647739-69647758 None:intergenic 40.0%
ACTACTATGTCTGTGTGTGT+GGG + chr1_4:69647897-69647916 None:intergenic 40.0%
!!! AACCTCCTGGAAAGCATTTT+CGG + chr1_4:69648081-69648100 None:intergenic 40.0%
TCAACTCTTCGAACACAACA+AGG - chr1_4:69648128-69648147 Msa0181430:intron 40.0%
TGCAGGATATTGTTCAATCC+AGG - chr1_4:69648297-69648316 Msa0181430:intron 40.0%
TATAGGAAAACTAGAAGGCC+TGG + chr1_4:69648318-69648337 None:intergenic 40.0%
!!! GTGCAAGCAACTAGGTTTTT+TGG + chr1_4:69648461-69648480 None:intergenic 40.0%
AGAAACTTGTGCAAGCAACT+AGG + chr1_4:69648469-69648488 None:intergenic 40.0%
GCTAGAGCAGAAATTGGTAA+TGG - chr1_4:69648490-69648509 Msa0181430:three_prime_UTR 40.0%
TGCAATTCTCAGGTATATCC+TGG + chr1_4:69648694-69648713 None:intergenic 40.0%
TCAAACTTCCCCAAACAAGA+GGG + chr1_4:69648782-69648801 None:intergenic 40.0%
TTCAAACTTCCCCAAACAAG+AGG + chr1_4:69648783-69648802 None:intergenic 40.0%
! TCTTGTTTGGGGAAGTTTGA+AGG - chr1_4:69648782-69648801 Msa0181430:three_prime_UTR 40.0%
AAGAGACTTCACCAAATAGC+AGG - chr1_4:69648922-69648941 Msa0181430:intron 40.0%
TATTTGAACACACTAGCCAG+TGG + chr1_4:69648948-69648967 None:intergenic 40.0%
GATTAAATATGGGGGCAGAA+AGG + chr1_4:69649149-69649168 None:intergenic 40.0%
AGTCCAGCAAATAGCTACAT+AGG - chr1_4:69649395-69649414 Msa0181430:intron 40.0%
CATCCTATGTAGCTATTTGC+TGG + chr1_4:69649401-69649420 None:intergenic 40.0%
CTTCTGGCATTTCAATGCTT+CGG + chr1_4:69649592-69649611 None:intergenic 40.0%
!!! ATTTCCACTTTTAGGTTGCG+AGG - chr1_4:69649690-69649709 Msa0181430:three_prime_UTR 40.0%
AATTCCTCGCAACCTAAAAG+TGG + chr1_4:69649697-69649716 None:intergenic 40.0%
! GGTGACTGGTAATGTAAAAG+AGG + chr1_4:69649837-69649856 None:intergenic 40.0%
TACCAGTCACCTTGACTTAA+TGG - chr1_4:69649846-69649865 Msa0181430:intron 40.0%
! TGGACATTTAGGACTTTGAG+TGG - chr1_4:69649866-69649885 Msa0181430:intron 40.0%
CTAGTTCACAACTATCACGT+GGG + chr1_4:69650160-69650179 None:intergenic 40.0%
ACTAGTTCACAACTATCACG+TGG + chr1_4:69650161-69650180 None:intergenic 40.0%
GCTTAAAGAACAAAAGGCGA+GGG - chr1_4:69650272-69650291 Msa0181430:three_prime_UTR 40.0%
ACAATAGTACGTTGCGTCTT+AGG + chr1_4:69650612-69650631 None:intergenic 40.0%
ACGCAACGTACTATTGTCAA+TGG - chr1_4:69650615-69650634 Msa0181430:intron 40.0%
TCAGGAGTCACTCCAAAATA+TGG - chr1_4:69650672-69650691 Msa0181430:three_prime_UTR 40.0%
! ATAGTGGTAAAGTTTGGAGC+CGG - chr1_4:69650712-69650731 Msa0181430:three_prime_UTR 40.0%
TCGTGAGTCTTAACTTCATC+TGG + chr1_4:69650792-69650811 None:intergenic 40.0%
ATCAGTCAGGAGTTAAGCTT+TGG - chr1_4:69650970-69650989 Msa0181430:intron 40.0%
! TCTGTCTCAACACTTTGAAG+TGG + chr1_4:69651029-69651048 None:intergenic 40.0%
AGGTTGTGTGATATAGATGG+AGG - chr1_4:69651104-69651123 Msa0181430:intron 40.0%
! ATGGAGGCAATATGGGTTAT+GGG - chr1_4:69651120-69651139 Msa0181430:intron 40.0%
TATGGGAACAAATCTCACGT+CGG - chr1_4:69651137-69651156 Msa0181430:intron 40.0%
! AAGCCTTCTGAATCTGCTTT+TGG + chr1_4:69651164-69651183 None:intergenic 40.0%
AAGCAGATTCAGAAGGCTTT+CGG - chr1_4:69651165-69651184 Msa0181430:intron 40.0%
AGCAATTTCGTCACATCATG+TGG - chr1_4:69651352-69651371 Msa0181430:intron 40.0%
TCACCTGATTCAGAAACTCA+TGG - chr1_4:69651386-69651405 Msa0181430:intron 40.0%
CACCTGATTCAGAAACTCAT+GGG - chr1_4:69651387-69651406 Msa0181430:intron 40.0%
AACCCATGAGTTTCTGAATC+AGG + chr1_4:69651392-69651411 None:intergenic 40.0%
AGTCAAGGATTGTGCAACAT+CGG - chr1_4:69651418-69651437 Msa0181430:intron 40.0%
! TATGCTGCAGCTTTTAGTCT+TGG + chr1_4:69651500-69651519 None:intergenic 40.0%
GCCAATTAATTTATCCGCAG+AGG - chr1_4:69651589-69651608 Msa0181430:CDS 40.0%
! TTTACTGACGGTTTTCTGTC+AGG - chr1_4:69651620-69651639 Msa0181430:CDS 40.0%
TCTGTCAGGAAATTGAAGGT+AGG - chr1_4:69651634-69651653 Msa0181430:intron 40.0%
CCTATTTGAAGGAAAAGGAC+AGG + chr1_4:69651685-69651704 None:intergenic 40.0%
! CCTGTCCTTTTCCTTCAAAT+AGG - chr1_4:69651682-69651701 Msa0181430:intron 40.0%
CCGGAAAGAATTGAAATCGG+CGG + chr1_4:69645393-69645412 None:intergenic 45.0%
!! CCGCCGATTTCAATTCTTTC+CGG - chr1_4:69645390-69645409 Msa0181430:three_prime_UTR 45.0%
GAGGAAGAGATCGATTGGAA+GGG + chr1_4:69645421-69645440 None:intergenic 45.0%
AGAGGAAGAGATCGATTGGA+AGG + chr1_4:69645422-69645441 None:intergenic 45.0%
AATGAGATGACGTACGAGAG+AGG + chr1_4:69645440-69645459 None:intergenic 45.0%
GCGTGATCTAATCTAGATCG+AGG + chr1_4:69645478-69645497 None:intergenic 45.0%
GACCTATGTTGTAAGGATCG+CGG - chr1_4:69645897-69645916 Msa0181430:three_prime_UTR 45.0%
TTCCGCGATCCTTACAACAT+AGG + chr1_4:69645902-69645921 None:intergenic 45.0%
!! CATAAAATTGGGAGTACCGG+AGG + chr1_4:69646124-69646143 None:intergenic 45.0%
ATTTGGCAGAAATTCCAGGG+TGG - chr1_4:69646549-69646568 Msa0181430:three_prime_UTR 45.0%
GGCATAAACGTGTACACCAT+CGG - chr1_4:69646660-69646679 Msa0181430:three_prime_UTR 45.0%
!! GGGATCTTTTAGGGGCATAT+TGG - chr1_4:69646858-69646877 Msa0181430:intron 45.0%
! CACAAGTCTGTTTTCACCCT+TGG + chr1_4:69647047-69647066 None:intergenic 45.0%
TGTGTAGCTCTCTGTAGAAG+AGG - chr1_4:69647167-69647186 Msa0181430:intron 45.0%
GATTTGCCTTGCACACGTAA+TGG - chr1_4:69647287-69647306 Msa0181430:three_prime_UTR 45.0%
CTAAAAGACACCTTCATGGG+TGG + chr1_4:69647707-69647726 None:intergenic 45.0%
GACTACTATGTCTGTGTGTG+TGG + chr1_4:69647898-69647917 None:intergenic 45.0%
!!! TCCTGGAAAGCATTTTCGGT+GGG + chr1_4:69648077-69648096 None:intergenic 45.0%
GCTTGTACAATTGAAGACCC+TGG + chr1_4:69648104-69648123 None:intergenic 45.0%
!! CATGTTTTTGATGGAGAGGC+TGG - chr1_4:69648419-69648438 Msa0181430:three_prime_UTR 45.0%
ATGGAGAGGCTGGAAAGATT+GGG - chr1_4:69648429-69648448 Msa0181430:three_prime_UTR 45.0%
! TCTTCCCTTTGGCTTCTTCA+CGG - chr1_4:69649069-69649088 Msa0181430:intron 45.0%
CACGCCTTTACCTATGTGAA+AGG + chr1_4:69649552-69649571 None:intergenic 45.0%
CTTTCACATAGGTAAAGGCG+TGG - chr1_4:69649550-69649569 Msa0181430:intron 45.0%
ATTGAAATGCCAGAAGCTGC+TGG - chr1_4:69649596-69649615 Msa0181430:intron 45.0%
GTCCATTAAGTCAAGGTGAC+TGG + chr1_4:69649851-69649870 None:intergenic 45.0%
TTACAGACAAGCTGAGGCTT+TGG - chr1_4:69650224-69650243 Msa0181430:three_prime_UTR 45.0%
GGCTTAAAGAACAAAAGGCG+AGG - chr1_4:69650271-69650290 Msa0181430:three_prime_UTR 45.0%
! AAAGGGTGCATCAGAAACAC+AGG - chr1_4:69650321-69650340 Msa0181430:three_prime_UTR 45.0%
AAGTCACATGCAGCCAAAGA+TGG + chr1_4:69650369-69650388 None:intergenic 45.0%
! CTACACCTTCATTGGTGTCT+GGG + chr1_4:69650416-69650435 None:intergenic 45.0%
! TCTACACCTTCATTGGTGTC+TGG + chr1_4:69650417-69650436 None:intergenic 45.0%
TTGTGACACTGATCAGAACG+TGG - chr1_4:69650461-69650480 Msa0181430:intron 45.0%
TCATAATCCTCGACGCACAA+TGG - chr1_4:69650566-69650585 Msa0181430:intron 45.0%
AACTTTACCACTATCACGGC+TGG + chr1_4:69650706-69650725 None:intergenic 45.0%
!! GCCGTGATAGTGGTAAAGTT+TGG - chr1_4:69650706-69650725 Msa0181430:three_prime_UTR 45.0%
GGCAAACCAGAATATTGGTC+AGG - chr1_4:69650908-69650927 Msa0181430:intron 45.0%
GCTTCTCCTGACCAATATTC+TGG + chr1_4:69650917-69650936 None:intergenic 45.0%
AAACCTGACTCCTTTCATGG+AGG - chr1_4:69650942-69650961 Msa0181430:intron 45.0%
CTGATTGTTGCCTCCATGAA+AGG + chr1_4:69650955-69650974 None:intergenic 45.0%
!! TTAGTTTCATGCTGGCTCAC+TGG + chr1_4:69650999-69651018 None:intergenic 45.0%
!! GTCTCAACACTTTGAAGTGG+TGG + chr1_4:69651026-69651045 None:intergenic 45.0%
ACAGAAGTTGACGTAGTCCA+TGG - chr1_4:69651044-69651063 Msa0181430:intron 45.0%
! GATGGAGGCAATATGGGTTA+TGG - chr1_4:69651119-69651138 Msa0181430:intron 45.0%
ATGGGAACAAATCTCACGTC+GGG - chr1_4:69651138-69651157 Msa0181430:intron 45.0%
TCATGGGTTCAAACCAGTCA+AGG - chr1_4:69651403-69651422 Msa0181430:intron 45.0%
GATGTTGCACAATCCTTGAC+TGG + chr1_4:69651419-69651438 None:intergenic 45.0%
!!! ATTTAAATTAATCAATTTTT+AGG + chr1_4:69645231-69645250 None:intergenic 5.0%
!! ATTCAAAAATATAAAAATTA+TGG - chr1_4:69645821-69645840 Msa0181430:three_prime_UTR 5.0%
GAATTGAAATCGGCGGCGTA+GGG + chr1_4:69645386-69645405 None:intergenic 50.0%
AGAATTGAAATCGGCGGCGT+AGG + chr1_4:69645387-69645406 None:intergenic 50.0%
ATCGATTGGAAGGGACGATC+CGG + chr1_4:69645412-69645431 None:intergenic 50.0%
CGAGAGAGGAAGAGATCGAT+TGG + chr1_4:69645426-69645445 None:intergenic 50.0%
GTACTGTAGCGCTATTGCAG+TGG + chr1_4:69645945-69645964 None:intergenic 50.0%
GAGGCAGTAAGTTTCGCAAC+TGG + chr1_4:69646105-69646124 None:intergenic 50.0%
GTTGCGAAACTTACTGCCTC+CGG - chr1_4:69646105-69646124 Msa0181430:three_prime_UTR 50.0%
GCCCTAGGAAAGGAAAGGAA+TGG + chr1_4:69646207-69646226 None:intergenic 50.0%
TTCCTTTCCTTTCCTAGGGC+TGG - chr1_4:69646207-69646226 Msa0181430:three_prime_UTR 50.0%
ACCTTTGCAGGAGAGAACAG+AGG + chr1_4:69646575-69646594 None:intergenic 50.0%
GCTCTCTGTAGAAGAGGCAA+AGG - chr1_4:69647173-69647192 Msa0181430:intron 50.0%
GCATAAATGAAAGTGGGGGG+AGG - chr1_4:69647334-69647353 Msa0181430:three_prime_UTR 50.0%
CGTCCTTTGTCCTTCTTGTC+TGG - chr1_4:69647570-69647589 Msa0181430:intron 50.0%
TTGCTAGAAGCCACCCATGA+AGG - chr1_4:69647694-69647713 Msa0181430:intron 50.0%
GGAAATCACACCTTGAGGTG+TGG + chr1_4:69647734-69647753 None:intergenic 50.0%
!!! CTGGAAAGCATTTTCGGTGG+GGG + chr1_4:69648075-69648094 None:intergenic 50.0%
!!! CCTGGAAAGCATTTTCGGTG+GGG + chr1_4:69648076-69648095 None:intergenic 50.0%
!!! CTCCTGGAAAGCATTTTCGG+TGG + chr1_4:69648078-69648097 None:intergenic 50.0%
CACCGAAAATGCTTTCCAGG+AGG - chr1_4:69648076-69648095 Msa0181430:intron 50.0%
AATGCTTTCCAGGAGGTTCC+AGG - chr1_4:69648083-69648102 Msa0181430:intron 50.0%
ATGCTTTCCAGGAGGTTCCA+GGG - chr1_4:69648084-69648103 Msa0181430:intron 50.0%
CCAGCCCTGAGATAATACTG+TGG + chr1_4:69648167-69648186 None:intergenic 50.0%
CCACAGTATTATCTCAGGGC+TGG - chr1_4:69648164-69648183 Msa0181430:intron 50.0%
GATGGAGAGGCTGGAAAGAT+TGG - chr1_4:69648428-69648447 Msa0181430:three_prime_UTR 50.0%
AGAGAGAGAGAGAGACAGAG+AGG + chr1_4:69648566-69648585 None:intergenic 50.0%
TGCCACACTTCCCTCTTGTT+TGG - chr1_4:69648769-69648788 Msa0181430:three_prime_UTR 50.0%
! GCCACACTTCCCTCTTGTTT+GGG - chr1_4:69648770-69648789 Msa0181430:three_prime_UTR 50.0%
! CCACACTTCCCTCTTGTTTG+GGG - chr1_4:69648771-69648790 Msa0181430:three_prime_UTR 50.0%
ACTCGGCATGATATTGCACG+AGG - chr1_4:69648867-69648886 Msa0181430:intron 50.0%
CTCGGCATGATATTGCACGA+GGG - chr1_4:69648868-69648887 Msa0181430:intron 50.0%
TTCACCAAATAGCAGGCCAC+TGG - chr1_4:69648929-69648948 Msa0181430:intron 50.0%
! CTTCCCTTTGGCTTCTTCAC+GGG - chr1_4:69649070-69649089 Msa0181430:intron 50.0%
CTTCCCGTGAAGAAGCCAAA+GGG + chr1_4:69649076-69649095 None:intergenic 50.0%
TTCACGGGAAGGTTGTACCA+GGG - chr1_4:69649085-69649104 Msa0181430:intron 50.0%
AGGAGGAAGCTGCTCAAAGA+AGG - chr1_4:69649625-69649644 Msa0181430:intron 50.0%
GCGAGGGACCAACTTGAAAA+TGG - chr1_4:69650288-69650307 Msa0181430:three_prime_UTR 50.0%
GTGCATCAGAAACACAGGAG+AGG - chr1_4:69650326-69650345 Msa0181430:three_prime_UTR 50.0%
ATCGCCAGAGGAACCATCTT+TGG - chr1_4:69650353-69650372 Msa0181430:intron 50.0%
CATTGCCCAGACACCAATGA+AGG - chr1_4:69650408-69650427 Msa0181430:intron 50.0%
GGAGCCACAGACATTCCAAT+CGG - chr1_4:69650482-69650501 Msa0181430:intron 50.0%
GCATCCGATTGGAATGTCTG+TGG + chr1_4:69650489-69650508 None:intergenic 50.0%
TTCCAATCGGATGCACAGTC+AGG - chr1_4:69650495-69650514 Msa0181430:intron 50.0%
AACCTGACTGTGCATCCGAT+TGG + chr1_4:69650500-69650519 None:intergenic 50.0%
AATGGAACCAGCCGTGATAG+TGG - chr1_4:69650696-69650715 Msa0181430:three_prime_UTR 50.0%
TTGCCTCCATGAAAGGAGTC+AGG + chr1_4:69650948-69650967 None:intergenic 50.0%
CATGGAGGCAACAATCAGTC+AGG - chr1_4:69650957-69650976 Msa0181430:intron 50.0%
GGGCCAAAAGCAGATTCAGA+AGG - chr1_4:69651158-69651177 Msa0181430:intron 50.0%
! AAAGGCTTTTGCAGCATCGC+TGG + chr1_4:69651195-69651214 None:intergenic 50.0%
CTCAGGCCTCATTCTAGGTT+TGG + chr1_4:69651453-69651472 None:intergenic 50.0%
CCTTTCTCAGGCCTCATTCT+AGG + chr1_4:69651458-69651477 None:intergenic 50.0%
CCTAGAATGAGGCCTGAGAA+AGG - chr1_4:69651455-69651474 Msa0181430:intron 50.0%
CTACAATAGGTGCAGCGTGC+AGG - chr1_4:69645301-69645320 Msa0181430:three_prime_UTR 55.0%
AATAGGTGCAGCGTGCAGGA+AGG - chr1_4:69645305-69645324 Msa0181430:three_prime_UTR 55.0%
CGGCGTAGGGATTGAGAAGA+AGG + chr1_4:69645373-69645392 None:intergenic 55.0%
CACCAGCCCTAGGAAAGGAA+AGG + chr1_4:69646212-69646231 None:intergenic 55.0%
CTTTCCTTTCCTAGGGCTGG+TGG - chr1_4:69646210-69646229 Msa0181430:three_prime_UTR 55.0%
GCCTCTGTTCTCTCCTGCAA+AGG - chr1_4:69646571-69646590 Msa0181430:three_prime_UTR 55.0%
CCCCACCGAAAATGCTTTCC+AGG - chr1_4:69648073-69648092 Msa0181430:intron 55.0%
TTGAAGACCCTGGAACCTCC+TGG + chr1_4:69648094-69648113 None:intergenic 55.0%
!!! CAGGGCTGGTTTCTCCCTTT+TGG - chr1_4:69648178-69648197 Msa0181430:intron 55.0%
CCCCAAACAAGAGGGAAGTG+TGG + chr1_4:69648774-69648793 None:intergenic 55.0%
CTAGCCAGTGGCCTGCTATT+TGG + chr1_4:69648936-69648955 None:intergenic 55.0%
CCTTCCCGTGAAGAAGCCAA+AGG + chr1_4:69649077-69649096 None:intergenic 55.0%
! CCTTTGGCTTCTTCACGGGA+AGG - chr1_4:69649074-69649093 Msa0181430:intron 55.0%
CTTCACGGGAAGGTTGTACC+AGG - chr1_4:69649084-69649103 Msa0181430:intron 55.0%
GAAATGCCAGAAGCTGCTGG+TGG - chr1_4:69649599-69649618 Msa0181430:intron 55.0%
AGGAGAGGAGATATCGCCAG+AGG - chr1_4:69650341-69650360 Msa0181430:intron 55.0%
GCAGCCAAAGATGGTTCCTC+TGG + chr1_4:69650360-69650379 None:intergenic 55.0%
GACGCACAATGGTTGCCAGA+CGG - chr1_4:69650577-69650596 Msa0181430:intron 55.0%
CAATGGTTGCCAGACGGCTA+AGG - chr1_4:69650583-69650602 Msa0181430:intron 55.0%
CTTAGGATGCCTTAGCCGTC+TGG + chr1_4:69650595-69650614 None:intergenic 55.0%
GTCACCACCAGCCCTAGGAA+AGG + chr1_4:69646217-69646236 None:intergenic 60.0%
! TTCCTAGGGCTGGTGGTGAC+AGG - chr1_4:69646217-69646236 Msa0181430:three_prime_UTR 60.0%
ATGCCAGAAGCTGCTGGTGG+AGG - chr1_4:69649602-69649621 Msa0181430:intron 60.0%
CTGGCAACCATTGTGCGTCG+AGG + chr1_4:69650576-69650595 None:intergenic 60.0%
GTGGTGACAGGCCAGCACAG+TGG - chr1_4:69646229-69646248 Msa0181430:three_prime_UTR 65.0%
GGAGAGAACAGAGGCCACCC+TGG + chr1_4:69646566-69646585 None:intergenic 65.0%
GGGGGCAGAAAGGGATGCCA+GGG + chr1_4:69649139-69649158 None:intergenic 65.0%
TGGGGGCAGAAAGGGATGCC+AGG + chr1_4:69649140-69649159 None:intergenic 65.0%
CCTCCTCCACCAGCAGCTTC+TGG + chr1_4:69649608-69649627 None:intergenic 65.0%
CCAGAAGCTGCTGGTGGAGG+AGG - chr1_4:69649605-69649624 Msa0181430:intron 65.0%
GAAGCTGCTGGTGGAGGAGG+AGG - chr1_4:69649608-69649627 Msa0181430:intron 65.0%
GGCCTGTCACCACCAGCCCT+AGG + chr1_4:69646222-69646241 None:intergenic 70.0%
GCCAGGGACAGAGTCGCCTC+AGG + chr1_4:69649123-69649142 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 69645120 69651795 69645120 ID=Msa0181430;Name=Msa0181430
chr1_4 mRNA 69645120 69651795 69645120 ID=Msa0181430-mRNA-1;Parent=Msa0181430;Name=Msa0181430-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.9|0.81|0.90|0.9|0.81|11|2277|73
chr1_4 exon 69645120 69645573 69645120 ID=Msa0181430-mRNA-1:exon:23163;Parent=Msa0181430-mRNA-1
chr1_4 exon 69645691 69646685 69645691 ID=Msa0181430-mRNA-1:exon:23162;Parent=Msa0181430-mRNA-1
chr1_4 exon 69647269 69647354 69647269 ID=Msa0181430-mRNA-1:exon:23161;Parent=Msa0181430-mRNA-1
chr1_4 exon 69648410 69648613 69648410 ID=Msa0181430-mRNA-1:exon:23160;Parent=Msa0181430-mRNA-1
chr1_4 exon 69648716 69648820 69648716 ID=Msa0181430-mRNA-1:exon:23159;Parent=Msa0181430-mRNA-1
chr1_4 exon 69649688 69649741 69649688 ID=Msa0181430-mRNA-1:exon:23158;Parent=Msa0181430-mRNA-1
chr1_4 exon 69650029 69650073 69650029 ID=Msa0181430-mRNA-1:exon:23157;Parent=Msa0181430-mRNA-1
chr1_4 exon 69650215 69650357 69650215 ID=Msa0181430-mRNA-1:exon:23156;Parent=Msa0181430-mRNA-1
chr1_4 exon 69650630 69650858 69650630 ID=Msa0181430-mRNA-1:exon:23155;Parent=Msa0181430-mRNA-1
chr1_4 exon 69651471 69651647 69651471 ID=Msa0181430-mRNA-1:exon:23154;Parent=Msa0181430-mRNA-1
chr1_4 exon 69651789 69651795 69651789 ID=Msa0181430-mRNA-1:exon:23153;Parent=Msa0181430-mRNA-1
chr1_4 CDS 69651789 69651795 69651789 ID=Msa0181430-mRNA-1:cds;Parent=Msa0181430-mRNA-1
chr1_4 CDS 69651471 69651647 69651471 ID=Msa0181430-mRNA-1:cds;Parent=Msa0181430-mRNA-1
chr1_4 CDS 69650821 69650858 69650821 ID=Msa0181430-mRNA-1:cds;Parent=Msa0181430-mRNA-1
chr1_4 three_prime_UTR 69650630 69650820 69650630 ID=Msa0181430-mRNA-1:three_prime_utr;Parent=Msa0181430-mRNA-1
chr1_4 three_prime_UTR 69650215 69650357 69650215 ID=Msa0181430-mRNA-1:three_prime_utr;Parent=Msa0181430-mRNA-1
chr1_4 three_prime_UTR 69650029 69650073 69650029 ID=Msa0181430-mRNA-1:three_prime_utr;Parent=Msa0181430-mRNA-1
chr1_4 three_prime_UTR 69649688 69649741 69649688 ID=Msa0181430-mRNA-1:three_prime_utr;Parent=Msa0181430-mRNA-1
chr1_4 three_prime_UTR 69648716 69648820 69648716 ID=Msa0181430-mRNA-1:three_prime_utr;Parent=Msa0181430-mRNA-1
chr1_4 three_prime_UTR 69648410 69648613 69648410 ID=Msa0181430-mRNA-1:three_prime_utr;Parent=Msa0181430-mRNA-1
chr1_4 three_prime_UTR 69647269 69647354 69647269 ID=Msa0181430-mRNA-1:three_prime_utr;Parent=Msa0181430-mRNA-1
chr1_4 three_prime_UTR 69645691 69646685 69645691 ID=Msa0181430-mRNA-1:three_prime_utr;Parent=Msa0181430-mRNA-1
chr1_4 three_prime_UTR 69645120 69645573 69645120 ID=Msa0181430-mRNA-1:three_prime_utr;Parent=Msa0181430-mRNA-1
Gene Sequence

>Msa0181430

ATGAAAGAAACGTTGTTTTTTCGCCCTACTACTACGACTACTACAATAGGTGCAGCGTGCAGGAAGGAAGCAGAGTTCTCTCTTCTACCGCCATTTTCTCTATCGTTTTCCTTCTTCTCAATCCCTACGCCGCCGATTTCAATTCTTTCCGGATCGTCCCTTCCAATCGATCTCTTCCTCTCTCGGGAATCCTGTAAAGTTTCTTGGTTAGGTTTGGGCTGA
Protein sequence

>Msa0181430

MKETLFFRPTTTTTTIGAACRKEAEFSLLPPFSLSFSFFSIPTPPISILSGSSLPIDLFLSRESCKVSWLGLG*