Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1403560 | AES63159.1 | 92.434 | 978 | 58 | 5 | 25 | 997 | 18 | 984 | 0.0 | 1675 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1403560 | sp|Q9XHM1|EIF3C_MEDTR | 94.569 | 939 | 46 | 4 | 60 | 997 | 1 | 935 | 0.0 | 1642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1403560 | G7IN73 | 92.434 | 978 | 58 | 5 | 25 | 997 | 18 | 984 | 0.0 | 1675 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016540 | Msa1403560 | 0.814719 | 1.335222e-51 | -8.615850e-47 |
| Msa0035320 | Msa1403560 | 0.803078 | 4.139376e-49 | -8.615850e-47 |
| Msa0047640 | Msa1403560 | 0.862720 | 4.148224e-64 | -8.615850e-47 |
| Msa0051970 | Msa1403560 | 0.857513 | 1.551327e-62 | -8.615850e-47 |
| Msa0062350 | Msa1403560 | 0.821857 | 3.229775e-53 | -8.615850e-47 |
| Msa0080250 | Msa1403560 | 0.826650 | 2.415218e-54 | -8.615850e-47 |
| Msa1375110 | Msa1403560 | 0.820774 | 5.741680e-53 | -8.615850e-47 |
| Msa1385810 | Msa1403560 | 0.803443 | 3.477919e-49 | -8.615850e-47 |
| Msa1393820 | Msa1403560 | 0.801479 | 8.829960e-49 | -8.615850e-47 |
| Msa1401020 | Msa1403560 | 0.808045 | 3.755996e-50 | -8.615850e-47 |
| Msa1403560 | Msa1403570 | 0.885219 | 9.815060e-72 | -8.615850e-47 |
| Msa1403560 | Msa1433730 | 0.830260 | 3.245264e-55 | -8.615850e-47 |
| Msa1403560 | Msa1440900 | 0.804151 | 2.479296e-49 | -8.615850e-47 |
| Msa1403560 | Msa1443310 | 0.890058 | 1.387848e-73 | -8.615850e-47 |
| Msa1403560 | Msa1459910 | 0.810217 | 1.286114e-50 | -8.615850e-47 |
| Msa0608270 | Msa1403560 | 0.871820 | 5.106103e-67 | -8.615850e-47 |
| Msa0615060 | Msa1403560 | 0.802879 | 4.550566e-49 | -8.615850e-47 |
| Msa0626270 | Msa1403560 | 0.802935 | 4.429511e-49 | -8.615850e-47 |
| Msa0639150 | Msa1403560 | 0.814607 | 1.413758e-51 | -8.615850e-47 |
| Msa0648830 | Msa1403560 | 0.869437 | 3.098291e-66 | -8.615850e-47 |
| Msa0691340 | Msa1403560 | 0.811117 | 8.219890e-51 | -8.615850e-47 |
| Msa0748880 | Msa1403560 | 0.809115 | 2.218816e-50 | -8.615850e-47 |
| Msa0760770 | Msa1403560 | 0.801152 | 1.030570e-48 | -8.615850e-47 |
| Msa0762680 | Msa1403560 | 0.801399 | 9.172188e-49 | -8.615850e-47 |
| Msa0790410 | Msa1403560 | 0.898031 | 7.901511e-77 | -8.615850e-47 |
| Msa0790580 | Msa1403560 | 0.859788 | 3.244715e-63 | -8.615850e-47 |
| Msa0805170 | Msa1403560 | 0.823932 | 1.061407e-53 | -8.615850e-47 |
| Msa0128360 | Msa1403560 | 0.854626 | 1.086002e-61 | -8.615850e-47 |
| Msa0138050 | Msa1403560 | 0.840097 | 1.067576e-57 | -8.615850e-47 |
| Msa0140880 | Msa1403560 | 0.835510 | 1.609223e-56 | -8.615850e-47 |
| Msa0167070 | Msa1403560 | 0.829772 | 4.269912e-55 | -8.615850e-47 |
| Msa0167400 | Msa1403560 | 0.818794 | 1.627204e-52 | -8.615850e-47 |
| Msa0181430 | Msa1403560 | 0.802224 | 6.210124e-49 | -8.615850e-47 |
| Msa0183250 | Msa1403560 | 0.822718 | 2.039485e-53 | -8.615850e-47 |
| Msa0187210 | Msa1403560 | 0.823084 | 1.675437e-53 | -8.615850e-47 |
| Msa0188690 | Msa1403560 | 0.802610 | 5.169388e-49 | -8.615850e-47 |
| Msa0188700 | Msa1403560 | 0.939526 | 1.096343e-99 | -8.615850e-47 |
| Msa0227450 | Msa1403560 | 0.855165 | 7.577300e-62 | -8.615850e-47 |
| Msa1305830 | Msa1403560 | 0.809144 | 2.187335e-50 | -8.615850e-47 |
| Msa0369420 | Msa1403560 | 0.819590 | 1.072080e-52 | -8.615850e-47 |
| Msa0428210 | Msa1403560 | 0.882965 | 6.689551e-71 | -8.615850e-47 |
| Msa0430230 | Msa1403560 | 0.803421 | 3.513634e-49 | -8.615850e-47 |
| Msa0463530 | Msa1403560 | 0.809217 | 2.109897e-50 | -8.615850e-47 |
| Msa0474570 | Msa1403560 | 0.827291 | 1.696980e-54 | -8.615850e-47 |
| Msa1031390 | Msa1403560 | 0.837631 | 4.638654e-57 | -8.615850e-47 |
| Msa1055200 | Msa1403560 | 0.845007 | 5.309771e-59 | -8.615850e-47 |
| Msa1070890 | Msa1403560 | 0.818308 | 2.097409e-52 | -8.615850e-47 |
| Msa1072600 | Msa1403560 | 0.813767 | 2.167017e-51 | -8.615850e-47 |
| Msa1095790 | Msa1403560 | 0.809580 | 1.763721e-50 | -8.615850e-47 |
| Msa0268110 | Msa1403560 | 0.816117 | 6.524682e-52 | -8.615850e-47 |
| Msa0270200 | Msa1403560 | 0.961194 | 2.026847e-119 | -8.615850e-47 |
| Msa0270210 | Msa1403560 | 0.864217 | 1.425582e-64 | -8.615850e-47 |
| Msa0307860 | Msa1403560 | 0.869441 | 3.089533e-66 | -8.615850e-47 |
| Msa0311090 | Msa1403560 | 0.808388 | 3.173511e-50 | -8.615850e-47 |
| Msa1115310 | Msa1403560 | 0.806614 | 7.551130e-50 | -8.615850e-47 |
| Msa1129640 | Msa1403560 | 0.813508 | 2.469918e-51 | -8.615850e-47 |
| Msa0512140 | Msa1403560 | 0.810081 | 1.375929e-50 | -8.615850e-47 |
| Msa0513370 | Msa1403560 | 0.801294 | 9.635594e-49 | -8.615850e-47 |
| Msa0519150 | Msa1403560 | 0.888984 | 3.633858e-73 | -8.615850e-47 |
| Msa0544730 | Msa1403560 | 0.856641 | 2.804228e-62 | -8.615850e-47 |
| Msa0546690 | Msa1403560 | 0.824951 | 6.111702e-54 | -8.615850e-47 |
| Msa0572300 | Msa1403560 | 0.800642 | 1.309730e-48 | -8.615850e-47 |
| Msa0572750 | Msa1403560 | 0.812837 | 3.467388e-51 | -8.615850e-47 |
| Msa0573010 | Msa1403560 | 0.808716 | 2.701131e-50 | -8.615850e-47 |
| Msa0586450 | Msa1403560 | 0.802735 | 4.872060e-49 | -8.615850e-47 |
| Msa0865620 | Msa1403560 | 0.800365 | 1.491583e-48 | -8.615850e-47 |
| Msa0959520 | Msa1403560 | 0.800039 | 1.737836e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1403560 | MtrunA17_Chr2g0277001 | 95.016 | 943 | 34 | 4 | 60 | 997 | 1 | 935 | 0.0 | 1675 |
| Msa1403560 | MtrunA17_Chr7g0275381 | 93.199 | 941 | 56 | 7 | 60 | 997 | 1 | 936 | 0.0 | 1671 |
| Msa1403560 | MtrunA17_Chr1g0155771 | 94.569 | 939 | 46 | 4 | 60 | 997 | 1 | 935 | 0.0 | 1642 |
| Msa1403560 | MtrunA17_Chr6g0468211 | 56.826 | 586 | 140 | 10 | 320 | 901 | 62 | 538 | 0.0 | 567 |
| Msa1403560 | MtrunA17_Chr2g0316781 | 51.852 | 405 | 49 | 7 | 225 | 628 | 12 | 271 | 4.49e-113 | 349 |
| Msa1403560 | MtrunA17_Chr2g0303811 | 81.935 | 155 | 28 | 0 | 626 | 780 | 1 | 155 | 1.57e-85 | 271 |
| Msa1403560 | MtrunA17_Chr6g0468421 | 57.752 | 258 | 41 | 3 | 383 | 640 | 1 | 190 | 2.24e-83 | 267 |
| Msa1403560 | MtrunA17_Chr6g0468011 | 60.606 | 198 | 47 | 4 | 320 | 515 | 12 | 180 | 8.05e-65 | 216 |
| Msa1403560 | MtrunA17_Chr6g0468411 | 75.556 | 135 | 29 | 1 | 617 | 747 | 5 | 139 | 9.49e-63 | 210 |
| Msa1403560 | MtrunA17_Chr2g0303821 | 61.468 | 109 | 41 | 1 | 788 | 895 | 1 | 109 | 2.38e-37 | 137 |
| Msa1403560 | MtrunA17_Chr6g0467941 | 47.917 | 144 | 23 | 2 | 604 | 747 | 1 | 92 | 4.07e-31 | 118 |
| Msa1403560 | MtrunA17_Chr6g0467931 | 65.347 | 101 | 33 | 2 | 787 | 885 | 1 | 101 | 5.44e-31 | 117 |
| Msa1403560 | MtrunA17_Chr6g0468001 | 57.658 | 111 | 25 | 3 | 787 | 895 | 1 | 91 | 2.21e-28 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1403560 | AT3G56150.2 | 66.490 | 946 | 263 | 14 | 60 | 997 | 1 | 900 | 0.0 | 1153 |
| Msa1403560 | AT3G56150.1 | 66.490 | 946 | 263 | 14 | 60 | 997 | 1 | 900 | 0.0 | 1153 |
| Msa1403560 | AT3G22860.1 | 63.799 | 616 | 204 | 6 | 304 | 909 | 181 | 787 | 0.0 | 789 |
Find 279 sgRNAs with CRISPR-Local
Find 423 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATGTTTGTTCTGATTTA+TGG | 0.039660 | tig0022967:-56366 | Msa1403560:three_prime_UTR |
| TCTGGTTGTTATGAGAATTT+AGG | 0.156316 | tig0022967:+60437 | None:intergenic |
| CAAGAAGTTCAAAGAGATTC+TGG | 0.204715 | tig0022967:-59491 | Msa1403560:CDS |
| GATTTCAGATGAAATTTCTT+TGG | 0.216565 | tig0022967:-56426 | Msa1403560:three_prime_UTR |
| GCACTGTAAGCCAGAGATTT+TGG | 0.217294 | tig0022967:-56234 | Msa1403560:three_prime_UTR |
| GCTGGGACTCATCTTCTTCT+TGG | 0.219134 | tig0022967:+59855 | None:intergenic |
| TGTAAAGATTAGGGATCTTT+TGG | 0.232109 | tig0022967:+59935 | None:intergenic |
| ACATGATCCCTGACAGTTTC+AGG | 0.235192 | tig0022967:+57276 | None:intergenic |
| TGTTTGTCTGAACTTTATTC+TGG | 0.235265 | tig0022967:-58518 | Msa1403560:CDS |
| CAATAATGTCAAAGGCCTTC+TGG | 0.238181 | tig0022967:+57217 | None:intergenic |
| GGTTTCCGCGCCACAAGTTC+CGG | 0.248793 | tig0022967:+58818 | None:intergenic |
| GCCACAAGGGTTCTTATTAA+TGG | 0.250263 | tig0022967:-57246 | Msa1403560:CDS |
| AACCAATGGCTTCGAGATTC+TGG | 0.262577 | tig0022967:-60411 | Msa1403560:CDS |
| TGCTCAGGCTTCTGCTAATA+AGG | 0.263529 | tig0022967:-59881 | Msa1403560:CDS |
| CTGGTTGTTATGAGAATTTA+GGG | 0.266616 | tig0022967:+60438 | None:intergenic |
| GGAAAATAGCAGGACCTTAA+TGG | 0.268698 | tig0022967:-58786 | Msa1403560:CDS |
| GTTGAAGGCTTTGGCATTGC+TGG | 0.280294 | tig0022967:+59837 | None:intergenic |
| GAATCATCAACCTTTATGTT+TGG | 0.286060 | tig0022967:+59247 | None:intergenic |
| TTTGGTTTGTAGGTATCTAT+TGG | 0.296703 | tig0022967:+60155 | None:intergenic |
| CAACAACGGGTTTGGTTTGT+AGG | 0.300152 | tig0022967:+60145 | None:intergenic |
| TATGCACTTAATCTAGATTC+TGG | 0.301092 | tig0022967:-56448 | Msa1403560:three_prime_UTR |
| TCCAGTTCCCTTCCTGCCCC+TGG | 0.302069 | tig0022967:+59465 | None:intergenic |
| ATCATATGATTCTTTCAGTT+TGG | 0.303868 | tig0022967:-57085 | Msa1403560:CDS |
| CTTCATTGAGTTGAAGGCTT+TGG | 0.318286 | tig0022967:+59828 | None:intergenic |
| CAGATTTAACAACACGCTTT+TGG | 0.326666 | tig0022967:+60100 | None:intergenic |
| TTATGAAGCAACGAGAAAAT+TGG | 0.328433 | tig0022967:-58933 | Msa1403560:CDS |
| GAGATGAGTGAGGAGTTAAA+AGG | 0.329554 | tig0022967:-58881 | Msa1403560:CDS |
| GGAGGCGGCTATCAGAATTC+AGG | 0.346447 | tig0022967:-56616 | Msa1403560:CDS |
| AATCATCAACCTTTATGTTT+GGG | 0.349179 | tig0022967:+59248 | None:intergenic |
| GATTATGCCGCTGCAGCTGC+TGG | 0.352272 | tig0022967:-56796 | Msa1403560:CDS |
| CCGGGATTTAGTACCTGTTC+TGG | 0.353112 | tig0022967:+58434 | None:intergenic |
| TCTATTGGCTGTATTGTTGT+TGG | 0.355511 | tig0022967:+60170 | None:intergenic |
| GGTGGTAGTGGAACGTCTTC+AGG | 0.355830 | tig0022967:-56772 | Msa1403560:CDS |
| TAGCAAGAAAGACAGGCTTT+TGG | 0.359604 | tig0022967:-59563 | Msa1403560:CDS |
| TACCCGCATGGTTAGCCTTA+GGG | 0.360330 | tig0022967:-56545 | Msa1403560:CDS |
| ACTCTCAAGGGTGCAGGCTT+TGG | 0.361470 | tig0022967:-56932 | Msa1403560:CDS |
| ATTTCAGATGAAATTTCTTT+GGG | 0.372007 | tig0022967:-56425 | Msa1403560:three_prime_UTR |
| ATGATGAAGAGAAGGTAAAT+AGG | 0.373547 | tig0022967:+57103 | None:intergenic |
| CAATGCTTTCAAGATATTCC+TGG | 0.380146 | tig0022967:+59026 | None:intergenic |
| AGATTTATATGCATATGATA+TGG | 0.383704 | tig0022967:+57450 | None:intergenic |
| ATGACCGTAGAGGGAGATAA+TGG | 0.387791 | tig0022967:-58905 | Msa1403560:CDS |
| GGCGCGGAAACCCACCTTCC+CGG | 0.387923 | tig0022967:-58807 | Msa1403560:CDS |
| GCAAGCTGGGATCAGCCAAC+TGG | 0.390557 | tig0022967:-56979 | Msa1403560:CDS |
| TCCGGCTTCCTGAGCTGATC+AGG | 0.393176 | tig0022967:+59670 | None:intergenic |
| AGATTTCAAAGCTTCTTCTA+AGG | 0.393340 | tig0022967:-59002 | Msa1403560:CDS |
| CTATTGGCTGTATTGTTGTT+GGG | 0.393873 | tig0022967:+60171 | None:intergenic |
| GCCTTGCCTTGTTTGAGAAT+AGG | 0.394600 | tig0022967:+56729 | None:intergenic |
| CTACCCGCATGGTTAGCCTT+AGG | 0.397357 | tig0022967:-56546 | Msa1403560:CDS |
| GCCAGGGGCAGGAAGGGAAC+TGG | 0.399839 | tig0022967:-59466 | Msa1403560:CDS |
| TGATGATGGCGATGCTCCTT+GGG | 0.400541 | tig0022967:-59596 | Msa1403560:CDS |
| GCTCAGTTTGATGTTAATCC+AGG | 0.401276 | tig0022967:-59352 | Msa1403560:CDS |
| TCGAAGCCATTGGTTTAGTC+TGG | 0.401988 | tig0022967:+60419 | None:intergenic |
| AGAGCCTTGATGTAAAGATT+AGG | 0.402756 | tig0022967:+59925 | None:intergenic |
| GTGATGATGGCGATGCTCCT+TGG | 0.404468 | tig0022967:-59597 | Msa1403560:CDS |
| TAGAACTCCACTCTCTTCTT+CGG | 0.408017 | tig0022967:+61500 | None:intergenic |
| GCTTGAAGATTTCCTTGCTC+AGG | 0.408980 | tig0022967:-59896 | Msa1403560:CDS |
| CCGGTCCTCCTGAAACTGTC+AGG | 0.411793 | tig0022967:-57284 | Msa1403560:CDS |
| ATGTAAGATGCACTGATTCC+AGG | 0.412950 | tig0022967:+57421 | None:intergenic |
| GAGCCTTGATGTAAAGATTA+GGG | 0.415850 | tig0022967:+59926 | None:intergenic |
| ATGACGGACCCATTCATGTC+TGG | 0.416244 | tig0022967:-59183 | Msa1403560:CDS |
| GCCGCTGCAGCTGCTGGTGG+TGG | 0.418701 | tig0022967:-56790 | Msa1403560:CDS |
| GTTTCCGCGCCACAAGTTCC+GGG | 0.419096 | tig0022967:+58819 | None:intergenic |
| TTAAGTGCATAATAATAAAC+TGG | 0.419627 | tig0022967:+56460 | None:intergenic |
| TAGATAATTTCTCAGTCAAC+TGG | 0.421894 | tig0022967:+56905 | None:intergenic |
| TGATACTAACACATCCATTA+AGG | 0.425287 | tig0022967:+58772 | None:intergenic |
| GCAGCTGCTGGTGGTGGTAG+TGG | 0.425549 | tig0022967:-56784 | Msa1403560:CDS |
| AATGAGTTCAACCCTCTTCA+AGG | 0.428889 | tig0022967:+58976 | None:intergenic |
| ACTGTCATCAACAACGGGTT+TGG | 0.429963 | tig0022967:+60137 | None:intergenic |
| AACAGGGCTATGTCACAGTT+AGG | 0.435704 | tig0022967:-58584 | Msa1403560:CDS |
| TTGAAGGCTTTGGCATTGCT+GGG | 0.436119 | tig0022967:+59838 | None:intergenic |
| GAAACTTGTGCCAAAATCTC+TGG | 0.436609 | tig0022967:+56224 | None:intergenic |
| CGTGCAGCACCCAAACATAA+AGG | 0.438376 | tig0022967:-59257 | Msa1403560:CDS |
| TGCCCATCTCTTCGCCTTGG+AGG | 0.438441 | tig0022967:+56820 | None:intergenic |
| TCAAAGAGATTCTGGAAGCC+AGG | 0.439840 | tig0022967:-59483 | Msa1403560:CDS |
| GCATATAAATCTTGAGCTCC+TGG | 0.445116 | tig0022967:-57439 | Msa1403560:CDS |
| GGCATATGCCCACTGAGGCC+TGG | 0.449256 | tig0022967:+59334 | None:intergenic |
| ATGAGGAGCTTCATGCAAGC+TGG | 0.457408 | tig0022967:-56993 | Msa1403560:CDS |
| TTCAGTCAAGCTGGTGGGAG+TGG | 0.458684 | tig0022967:-56667 | Msa1403560:CDS |
| CAGAACAAACATTGGGAGCT+GGG | 0.459982 | tig0022967:+56374 | None:intergenic |
| ATGAGAATGAAACTAAGAAA+GGG | 0.464510 | tig0022967:-59213 | Msa1403560:CDS |
| TCAGAATCCGACACGGGCTC+CGG | 0.466090 | tig0022967:+59652 | None:intergenic |
| AATTATCTTTCAGGAAAGGT+TGG | 0.471050 | tig0022967:-57490 | Msa1403560:intron |
| TCAGAAATGTTGAACTCTCA+AGG | 0.471342 | tig0022967:-56945 | Msa1403560:CDS |
| TCCTGCCCATCTCTTCGCCT+TGG | 0.472750 | tig0022967:+56817 | None:intergenic |
| TCTAGAGGACGGGGAACGAT+TGG | 0.474394 | tig0022967:-56637 | Msa1403560:CDS |
| AACTGTCAGGGATCATGTTA+TGG | 0.475362 | tig0022967:-57271 | Msa1403560:CDS |
| TCTTACATCTGCTATGCTGC+TGG | 0.477105 | tig0022967:-57406 | Msa1403560:CDS |
| TGAACATTGGCTGCCATGTT+GGG | 0.479489 | tig0022967:+57378 | None:intergenic |
| TAATAAACTGGTAAAAGAAA+AGG | 0.479905 | tig0022967:+56472 | None:intergenic |
| AGCTGCAGTTTCTTCTTCAT+CGG | 0.482972 | tig0022967:-60494 | Msa1403560:CDS |
| GGGAACTGGAAGGTTTGAAC+AGG | 0.485450 | tig0022967:-59452 | Msa1403560:CDS |
| GATTCTGAAACTTCTGAGCT+TGG | 0.486351 | tig0022967:-59637 | Msa1403560:CDS |
| TTGTTGGGTTCATCATCAAC+GGG | 0.486651 | tig0022967:+60186 | None:intergenic |
| TAAGTTGCCCCAGACATGAA+TGG | 0.490965 | tig0022967:+59174 | None:intergenic |
| TCATGAAAAGACTCCAGAAC+AGG | 0.493182 | tig0022967:-58447 | Msa1403560:intron |
| GTGAATATGTTGAGAGACTC+AGG | 0.493281 | tig0022967:-59084 | Msa1403560:CDS |
| CAGAATTCAGGGAGGACTCA+AGG | 0.493339 | tig0022967:-56604 | Msa1403560:CDS |
| GAAGCAAGGTTAGGCGGCGG+TGG | 0.493372 | tig0022967:-56853 | Msa1403560:CDS |
| GTTGTTGGGTTCATCATCAA+CGG | 0.494263 | tig0022967:+60185 | None:intergenic |
| TCGTCACTGTCATCAACAAC+GGG | 0.495380 | tig0022967:+60132 | None:intergenic |
| TGACATTATTGCATCTCTTG+AGG | 0.496021 | tig0022967:-57205 | Msa1403560:CDS |
| TCAGAACAAACATTGGGAGC+TGG | 0.496440 | tig0022967:+56373 | None:intergenic |
| CATTGGGAGCTGGGAGAGGA+GGG | 0.496780 | tig0022967:+56383 | None:intergenic |
| TGACGGACCCATTCATGTCT+GGG | 0.497542 | tig0022967:-59182 | Msa1403560:CDS |
| GGAAAAGGATGACGAGGATG+AGG | 0.497694 | tig0022967:-59731 | Msa1403560:CDS |
| CTTGGTAATGACAGGCCTCC+TGG | 0.498069 | tig0022967:-59619 | Msa1403560:CDS |
| CAGGAATATCTTGAAAGCAT+TGG | 0.498525 | tig0022967:-59025 | Msa1403560:CDS |
| TGACAGACACCGTGAGATAG+AGG | 0.498640 | tig0022967:-61531 | Msa1403560:CDS |
| TTATTCTGGTGGACGGGTGA+AGG | 0.499453 | tig0022967:-58504 | Msa1403560:CDS |
| AAATCAAGGAGGAGGCGCTT+AGG | 0.499787 | tig0022967:-57131 | Msa1403560:CDS |
| CATAAATCAGAACAAACATT+GGG | 0.500452 | tig0022967:+56367 | None:intergenic |
| ATGAACATTGGCTGCCATGT+TGG | 0.505127 | tig0022967:+57377 | None:intergenic |
| CTGGAAGCCAGGGGCAGGAA+GGG | 0.505830 | tig0022967:-59472 | Msa1403560:CDS |
| TCAACGGGTTCAGTATCGTT+AGG | 0.505992 | tig0022967:+60201 | None:intergenic |
| ACATTGGGAGCTGGGAGAGG+AGG | 0.506596 | tig0022967:+56382 | None:intergenic |
| ATGTTAATCCAGGCCTCAGT+GGG | 0.508312 | tig0022967:-59342 | Msa1403560:CDS |
| ACCCGCATGGTTAGCCTTAG+GGG | 0.508509 | tig0022967:-56544 | Msa1403560:CDS |
| CAGAAATGTTGAACTCTCAA+GGG | 0.508616 | tig0022967:-56944 | Msa1403560:CDS |
| AGATTCTGGAAGCCAGGGGC+AGG | 0.509743 | tig0022967:-59477 | Msa1403560:CDS |
| AGAATTCAGGGAGGACTCAA+GGG | 0.510031 | tig0022967:-56603 | Msa1403560:CDS |
| AGAATCTGCAGCTTCTGAGC+AGG | 0.511073 | tig0022967:+59391 | None:intergenic |
| ATCCTTCAGCATTTCTAGCA+CGG | 0.511752 | tig0022967:+57155 | None:intergenic |
| AAGTTGCCCCAGACATGAAT+GGG | 0.512091 | tig0022967:+59175 | None:intergenic |
| GGCAGTGGACGTACAGGATA+CGG | 0.514533 | tig0022967:-56709 | Msa1403560:CDS |
| GATGAGAATGAAACTAAGAA+AGG | 0.515170 | tig0022967:-59214 | Msa1403560:CDS |
| TCCAAGGCGAAGAGATGGGC+AGG | 0.515359 | tig0022967:-56818 | Msa1403560:CDS |
| AAGGTTAGGCGGCGGTGGGT+TGG | 0.516660 | tig0022967:-56848 | Msa1403560:CDS |
| ACCTGATCAGCTCAGGAAGC+CGG | 0.516893 | tig0022967:-59671 | Msa1403560:CDS |
| TCATTGAACCTGATCAGCTC+AGG | 0.519230 | tig0022967:-59678 | Msa1403560:CDS |
| TGCTCCGTTTGTTGTTACCC+CGG | 0.519622 | tig0022967:-58837 | Msa1403560:CDS |
| GATCCCTAATCTTTACATCA+AGG | 0.521376 | tig0022967:-59929 | Msa1403560:CDS |
| GTTCTTCCTCCTCTATCTCA+CGG | 0.521562 | tig0022967:+61522 | None:intergenic |
| TGGCGGCTATTCTAGAGGAC+GGG | 0.522471 | tig0022967:-56647 | Msa1403560:CDS |
| AGGACTTGATTATCAAATGT+AGG | 0.523141 | tig0022967:-59774 | Msa1403560:CDS |
| TGTTGAACTCTCAAGGGTGC+AGG | 0.524552 | tig0022967:-56938 | Msa1403560:CDS |
| GAGGCGGCTATCAGAATTCA+GGG | 0.525246 | tig0022967:-56615 | Msa1403560:CDS |
| CTCAACATATTCACGTGTGT+GGG | 0.525787 | tig0022967:+59093 | None:intergenic |
| GTGGGTTGGATCTGCCTCCA+AGG | 0.528953 | tig0022967:-56834 | Msa1403560:CDS |
| TCCCCTAAGGCTAACCATGC+GGG | 0.529790 | tig0022967:+56543 | None:intergenic |
| TGTTCTTGCACAGAATGTCC+AGG | 0.530188 | tig0022967:-59044 | Msa1403560:CDS |
| CTGAACTTTATTCTGGTGGA+CGG | 0.530497 | tig0022967:-58511 | Msa1403560:CDS |
| AAAAGCTTAGCAAGAAAGAC+AGG | 0.531266 | tig0022967:-59570 | Msa1403560:CDS |
| CTCTCCATTATCTCCCTCTA+CGG | 0.531803 | tig0022967:+58901 | None:intergenic |
| GTCCAGAATCTCGAAGCCAT+TGG | 0.533546 | tig0022967:+60409 | None:intergenic |
| GGGCTGGTTTCTGAAGCGCA+TGG | 0.535363 | tig0022967:-58542 | Msa1403560:CDS |
| CCACCTTCCCGGAAAATAGC+AGG | 0.535658 | tig0022967:-58796 | Msa1403560:CDS |
| GACTCATAAGCAACAGATCA+CGG | 0.536368 | tig0022967:+58657 | None:intergenic |
| AGAGGACGGGGAACGATTGG+AGG | 0.536414 | tig0022967:-56634 | Msa1403560:CDS |
| GACAGGCCTCCTGGTGATGA+TGG | 0.536973 | tig0022967:-59610 | Msa1403560:CDS |
| ATGCTATCAAGATCAATGAC+TGG | 0.537887 | tig0022967:-60026 | Msa1403560:CDS |
| TGTTGTTACCCCGGAACTTG+TGG | 0.539965 | tig0022967:-58828 | Msa1403560:CDS |
| CTGCCTCCAAGGCGAAGAGA+TGG | 0.540348 | tig0022967:-56823 | Msa1403560:CDS |
| CAAACATTGGGAGCTGGGAG+AGG | 0.541139 | tig0022967:+56379 | None:intergenic |
| TTGTCTGAACTTTATTCTGG+TGG | 0.542410 | tig0022967:-58515 | Msa1403560:CDS |
| AGGCAAGGCAGTGGACGTAC+AGG | 0.542622 | tig0022967:-56715 | Msa1403560:CDS |
| CAAGCTGGGATCAGCCAACT+GGG | 0.543584 | tig0022967:-56978 | Msa1403560:CDS |
| GTGGAACGTCTTCAGGTGGC+AGG | 0.543676 | tig0022967:-56765 | Msa1403560:CDS |
| AGTTCCGGGGTAACAACAAA+CGG | 0.544060 | tig0022967:+58833 | None:intergenic |
| TGAGGAGCTTCATGCAAGCT+GGG | 0.544437 | tig0022967:-56992 | Msa1403560:CDS |
| TAGGGAGAGTCCTGAGAGTG+AGG | 0.545078 | tig0022967:-59755 | Msa1403560:CDS |
| AATGCTGAAGGATAAAATCA+AGG | 0.545420 | tig0022967:-57145 | Msa1403560:CDS |
| TATGCCGCTGCAGCTGCTGG+TGG | 0.547820 | tig0022967:-56793 | Msa1403560:CDS |
| GGACTTGATTATCAAATGTA+GGG | 0.548379 | tig0022967:-59773 | Msa1403560:CDS |
| TCCTATTCTCAAACAAGGCA+AGG | 0.549766 | tig0022967:-56730 | Msa1403560:CDS |
| CTTCTGAGCTTGGTAATGAC+AGG | 0.550457 | tig0022967:-59627 | Msa1403560:CDS |
| CATAAAGGTTGATGATTCTG+TGG | 0.552363 | tig0022967:-59242 | Msa1403560:CDS |
| CCATAAATCAGAACAAACAT+TGG | 0.552425 | tig0022967:+56366 | None:intergenic |
| AGAATCATATGATGAAGAGA+AGG | 0.556503 | tig0022967:+57095 | None:intergenic |
| GAATTTCCGCCGCTTACTTG+AGG | 0.559029 | tig0022967:-57328 | Msa1403560:CDS |
| CCTGACAGTTTCAGGAGGAC+CGG | 0.559804 | tig0022967:+57284 | None:intergenic |
| CTTCTAAGGTAGCCTTGAAG+AGG | 0.561694 | tig0022967:-58988 | Msa1403560:CDS |
| TCTCAAACAAGGCAAGGCAG+TGG | 0.563066 | tig0022967:-56724 | Msa1403560:CDS |
| CAAAGAGATTCTGGAAGCCA+GGG | 0.563451 | tig0022967:-59482 | Msa1403560:CDS |
| TCTGGAAGCCAGGGGCAGGA+AGG | 0.564829 | tig0022967:-59473 | Msa1403560:CDS |
| AAGAGATGCAATAATGTCAA+AGG | 0.567228 | tig0022967:+57209 | None:intergenic |
| GCATTATCGTTCAGTCAAGC+TGG | 0.568957 | tig0022967:-56676 | Msa1403560:CDS |
| GTGTCCCATGTGATCTCACT+AGG | 0.569429 | tig0022967:+59520 | None:intergenic |
| GGACGGGGAACGATTGGAGG+CGG | 0.571631 | tig0022967:-56631 | Msa1403560:CDS |
| GGAGCATCGCCATCATCACC+AGG | 0.573601 | tig0022967:+59601 | None:intergenic |
| TGCCTCCAAGGCGAAGAGAT+GGG | 0.574902 | tig0022967:-56822 | Msa1403560:CDS |
| ACGCTTAGCATCATGAACAT+TGG | 0.575475 | tig0022967:+57365 | None:intergenic |
| ATCATGTTATGGCTGCCACA+AGG | 0.575690 | tig0022967:-57260 | Msa1403560:CDS |
| GGGAGAGTCCTGAGAGTGAG+GGG | 0.577170 | tig0022967:-59753 | Msa1403560:CDS |
| GTATCACTGATATACAAATA+CGG | 0.579558 | tig0022967:-58755 | Msa1403560:CDS |
| TTATTGCATCTCTTGAGGTG+TGG | 0.579762 | tig0022967:-57200 | Msa1403560:CDS |
| TCTCAACATATTCACGTGTG+TGG | 0.579942 | tig0022967:+59092 | None:intergenic |
| TGAACTTTATTCTGGTGGAC+GGG | 0.580196 | tig0022967:-58510 | Msa1403560:CDS |
| AGTGAGAAACAAACATTCAC+CGG | 0.580815 | tig0022967:-57303 | Msa1403560:CDS |
| CTGAAAATAATGCACCCAGT+TGG | 0.581929 | tig0022967:+56964 | None:intergenic |
| CGGTCCTCCTGAAACTGTCA+GGG | 0.584556 | tig0022967:-57283 | Msa1403560:CDS |
| AAAAGCCTAGTGAGATCACA+TGG | 0.585381 | tig0022967:-59525 | Msa1403560:CDS |
| AGGTTCAATGATCTCATCAT+CGG | 0.587424 | tig0022967:+59690 | None:intergenic |
| GTTGCTTCATAAACCTCATG+CGG | 0.588345 | tig0022967:+58944 | None:intergenic |
| GCTACAGAAGCAAGGTTAGG+CGG | 0.590150 | tig0022967:-56859 | Msa1403560:CDS |
| TGAGAATGAAACTAAGAAAG+GGG | 0.591503 | tig0022967:-59212 | Msa1403560:CDS |
| GTCAAGCACGAACTCCCCTA+AGG | 0.592556 | tig0022967:+56530 | None:intergenic |
| GGTTCATCATCAATATCAGT+GGG | 0.592619 | tig0022967:+60222 | None:intergenic |
| ACCACCACCAGCAGCTGCAG+CGG | 0.592682 | tig0022967:+56789 | None:intergenic |
| AGGTTCATCATCAATATCAG+TGG | 0.593036 | tig0022967:+60221 | None:intergenic |
| TTCTAAGGTAGCCTTGAAGA+GGG | 0.593307 | tig0022967:-58987 | Msa1403560:CDS |
| AGAGCTACAGAAGCAAGGTT+AGG | 0.594295 | tig0022967:-56862 | Msa1403560:CDS |
| GTGAAGGAATTGCTTGCGCA+AGG | 0.594439 | tig0022967:-58488 | Msa1403560:CDS |
| ACTCATAAGCAACAGATCAC+GGG | 0.595404 | tig0022967:+58658 | None:intergenic |
| AGATAATGGAGAGATGAGTG+AGG | 0.595500 | tig0022967:-58891 | Msa1403560:CDS |
| AAGCAAGGTTAGGCGGCGGT+GGG | 0.595912 | tig0022967:-56852 | Msa1403560:CDS |
| CATTTACTACAAACCGCATG+AGG | 0.596878 | tig0022967:-58957 | Msa1403560:CDS |
| TGCTATCAAGATCAATGACT+GGG | 0.597590 | tig0022967:-60025 | Msa1403560:CDS |
| AGGAAAGGTTGGAAAGAAGA+CGG | 0.598493 | tig0022967:-57479 | Msa1403560:CDS |
| GGGAGTGGCGGCTATTCTAG+AGG | 0.598572 | tig0022967:-56652 | Msa1403560:CDS |
| TTTCCGCGCCACAAGTTCCG+GGG | 0.599206 | tig0022967:+58820 | None:intergenic |
| GGAAGAACCGAAGAAGAGAG+TGG | 0.599220 | tig0022967:-61507 | Msa1403560:CDS |
| AGGGAGAGTCCTGAGAGTGA+GGG | 0.600175 | tig0022967:-59754 | Msa1403560:CDS |
| TTGGCTGAGATGACCGTAGA+GGG | 0.603596 | tig0022967:-58914 | Msa1403560:CDS |
| ATGAAAGAGCTACAGAAGCA+AGG | 0.604351 | tig0022967:-56867 | Msa1403560:CDS |
| AGTCAAGCTGGTGGGAGTGG+CGG | 0.604909 | tig0022967:-56664 | Msa1403560:CDS |
| GAAGGATAAAATCAAGGAGG+AGG | 0.606776 | tig0022967:-57139 | Msa1403560:CDS |
| GTGGCGGCTATTCTAGAGGA+CGG | 0.606807 | tig0022967:-56648 | Msa1403560:CDS |
| CAGGAAGCCGGAGCCCGTGT+CGG | 0.608070 | tig0022967:-59659 | Msa1403560:CDS |
| CGTAGATACTTCTACCCGCA+TGG | 0.610484 | tig0022967:-56557 | Msa1403560:CDS |
| GAATTCAGGGAGGACTCAAG+GGG | 0.615559 | tig0022967:-56602 | Msa1403560:CDS |
| GGCGGCTATTCTAGAGGACG+GGG | 0.620265 | tig0022967:-56646 | Msa1403560:CDS |
| ACTTGTCCTATTCTCAAACA+AGG | 0.620485 | tig0022967:-56735 | Msa1403560:CDS |
| CTTCGTGTTAGTTTGTTGTG+TGG | 0.622006 | tig0022967:-56280 | Msa1403560:three_prime_UTR |
| ACAGAAGCAAGGTTAGGCGG+CGG | 0.622574 | tig0022967:-56856 | Msa1403560:CDS |
| TAACAACCAGACTAAACCAA+TGG | 0.622757 | tig0022967:-60425 | Msa1403560:CDS |
| GATGACAGTGACGACGATGA+TGG | 0.623470 | tig0022967:-60123 | Msa1403560:CDS |
| TCCATTAATAAGAACCCTTG+TGG | 0.625098 | tig0022967:+57245 | None:intergenic |
| TATTAGCAGAAGCCTGAGCA+AGG | 0.625753 | tig0022967:+59884 | None:intergenic |
| TCATGTTATGGCTGCCACAA+GGG | 0.627218 | tig0022967:-57259 | Msa1403560:CDS |
| CACTGACCTCAAGTAAGCGG+CGG | 0.627273 | tig0022967:+57322 | None:intergenic |
| GTCGTCACTGTCATCAACAA+CGG | 0.635755 | tig0022967:+60131 | None:intergenic |
| TATCGTTCAGTCAAGCTGGT+GGG | 0.636549 | tig0022967:-56672 | Msa1403560:CDS |
| GGACGTACAGGATACGGTGG+AGG | 0.637438 | tig0022967:-56703 | Msa1403560:CDS |
| GAACGTCTTCAGGTGGCAGG+TGG | 0.637601 | tig0022967:-56762 | Msa1403560:CDS |
| TTATCGTTCAGTCAAGCTGG+TGG | 0.641328 | tig0022967:-56673 | Msa1403560:CDS |
| AAGAAAGGGGATGACTATGA+CGG | 0.642172 | tig0022967:-59199 | Msa1403560:CDS |
| GTGTTCATAGTATTGTCAGT+AGG | 0.642718 | tig0022967:-57026 | Msa1403560:CDS |
| TGATCGGGAAAGTTGATGAG+TGG | 0.643101 | tig0022967:-61563 | None:intergenic |
| TCAACATATTCACGTGTGTG+GGG | 0.645878 | tig0022967:+59094 | None:intergenic |
| CACCGTGCTAGAAATGCTGA+AGG | 0.646843 | tig0022967:-57157 | Msa1403560:CDS |
| GGCTTCGAGATTCTGGACAC+AGG | 0.648433 | tig0022967:-60404 | Msa1403560:intron |
| GAAGTTTCAGAATCCGACAC+GGG | 0.650738 | tig0022967:+59646 | None:intergenic |
| TATTAATGGAGATTTCCAGA+AGG | 0.655339 | tig0022967:-57232 | Msa1403560:CDS |
| AAAATGCGTGCAGAATATGC+TGG | 0.655482 | tig0022967:-59296 | Msa1403560:CDS |
| GGGGCAGGAAGGGAACTGGA+AGG | 0.655940 | tig0022967:-59462 | Msa1403560:CDS |
| GCAAGAAAATGTTCACCACA+TGG | 0.657602 | tig0022967:-58630 | Msa1403560:CDS |
| GGTAGTGGAACGTCTTCAGG+TGG | 0.658306 | tig0022967:-56769 | Msa1403560:CDS |
| TCTCACTGACCTCAAGTAAG+CGG | 0.659845 | tig0022967:+57319 | None:intergenic |
| TCGGGAAAGTTGATGAGTGG+CGG | 0.663569 | tig0022967:-61560 | None:intergenic |
| CTCCCCTAAGGCTAACCATG+CGG | 0.664230 | tig0022967:+56542 | None:intergenic |
| TTACCCCGGAACTTGTGGCG+CGG | 0.666773 | tig0022967:-58823 | Msa1403560:CDS |
| CAAACTCATCAAGAAGAGCA+TGG | 0.667504 | tig0022967:+58687 | None:intergenic |
| GATGTTAATCCAGGCCTCAG+TGG | 0.669943 | tig0022967:-59343 | Msa1403560:CDS |
| CAGTAGGATGATGATCAATG+AGG | 0.670922 | tig0022967:-57010 | Msa1403560:CDS |
| GCTGCTGGAAGTTCCCAACA+TGG | 0.671778 | tig0022967:-57391 | Msa1403560:CDS |
| GGAGAGTCCTGAGAGTGAGG+GGG | 0.672377 | tig0022967:-59752 | Msa1403560:CDS |
| TGTGCAAGAACAACAAACTG+AGG | 0.676475 | tig0022967:+59055 | None:intergenic |
| AAAGTTGATGAGTGGCGGCG+AGG | 0.677625 | tig0022967:-61555 | None:intergenic |
| GGCATATGCCCATAAATGTG+TGG | 0.678845 | tig0022967:-59321 | Msa1403560:CDS |
| GACGGACCCATTCATGTCTG+GGG | 0.680909 | tig0022967:-59181 | Msa1403560:CDS |
| TGAATATGTTGAGAGACTCA+GGG | 0.682868 | tig0022967:-59083 | Msa1403560:CDS |
| AGAAGTTTCAGAATCCGACA+CGG | 0.685846 | tig0022967:+59645 | None:intergenic |
| ATTGGCTGAGATGACCGTAG+AGG | 0.686209 | tig0022967:-58915 | Msa1403560:CDS |
| CTGACAATACTATGAACACG+AGG | 0.689117 | tig0022967:+57030 | None:intergenic |
| CAGACACCGTGAGATAGAGG+AGG | 0.699075 | tig0022967:-61528 | Msa1403560:CDS |
| ATTCTTGATCTGATCAACAG+TGG | 0.701566 | tig0022967:+60047 | None:intergenic |
| AAAGAGATTCTGGAAGCCAG+GGG | 0.701656 | tig0022967:-59481 | Msa1403560:CDS |
| GCATCGCCATCATCACCAGG+AGG | 0.707685 | tig0022967:+59604 | None:intergenic |
| TGCGGGTAGAAGTATCTACG+TGG | 0.710114 | tig0022967:+56560 | None:intergenic |
| TGATCCCTGACAGTTTCAGG+AGG | 0.717851 | tig0022967:+57279 | None:intergenic |
| GCGGGTAGAAGTATCTACGT+GGG | 0.720335 | tig0022967:+56561 | None:intergenic |
| AATTCAGGGAGGACTCAAGG+GGG | 0.722566 | tig0022967:-56601 | Msa1403560:CDS |
| GCTGAAGGATAAAATCAAGG+AGG | 0.734791 | tig0022967:-57142 | Msa1403560:CDS |
| AAAGCCTAGTGAGATCACAT+GGG | 0.747188 | tig0022967:-59524 | Msa1403560:CDS |
| GAAGAACAATAAGCAATACG+AGG | 0.757858 | tig0022967:-59794 | Msa1403560:CDS |
| AGTGGACGTACAGGATACGG+TGG | 0.758461 | tig0022967:-56706 | Msa1403560:CDS |
| TTATGGGCATATGCCCACTG+AGG | 0.770132 | tig0022967:+59329 | None:intergenic |
| GCGGCTATCAGAATTCAGGG+AGG | 0.799750 | tig0022967:-56612 | Msa1403560:CDS |
| TTTGTGTCGAAATGTCCATG+TGG | 0.823137 | tig0022967:+58615 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTAAAAAAATATTTTT+TGG | + | tig0022967:57033-57052 | None:intergenic | 0.0% |
| !!! | TATAATTATTTTACTTAAAC+AGG | + | tig0022967:56719-56738 | None:intergenic | 10.0% |
| !!! | CTTTATTTATAATAAATCAA+TGG | - | tig0022967:56854-56873 | Msa1403560:CDS | 10.0% |
| !! | ATAGAAATAGAAAAAATAAA+AGG | - | tig0022967:59525-59544 | Msa1403560:CDS | 10.0% |
| !!! | TAAATATTTACTGCATTTTA+CGG | + | tig0022967:56448-56467 | None:intergenic | 15.0% |
| !! | AAAATGCAGTAAATATTTAT+AGG | - | tig0022967:56449-56468 | Msa1403560:three_prime_UTR | 15.0% |
| !! | TTATTATAAATAAAGTCCAA+TGG | + | tig0022967:56849-56868 | None:intergenic | 15.0% |
| !!! | GTTTTAGGTTTATTTTAATT+TGG | + | tig0022967:56923-56942 | None:intergenic | 15.0% |
| !!! | ATTTAATGTGTATATGTTTT+GGG | + | tig0022967:57100-57119 | None:intergenic | 15.0% |
| !!! | AATTTAATGTGTATATGTTT+TGG | + | tig0022967:57101-57120 | None:intergenic | 15.0% |
| !! | AAATGTTTATACATAGAATT+TGG | + | tig0022967:57131-57150 | None:intergenic | 15.0% |
| !! | TACAATGATATTAGTTAATA+TGG | + | tig0022967:57165-57184 | None:intergenic | 15.0% |
| !! | TAACTAATATCATTGTAAAT+TGG | - | tig0022967:57168-57187 | Msa1403560:CDS | 15.0% |
| !! | CAGAAATTAAATTTGATTAT+TGG | - | tig0022967:59654-59673 | Msa1403560:CDS | 15.0% |
| !!! | TATTTTCCTTTAATTTTCTA+TGG | + | tig0022967:59835-59854 | None:intergenic | 15.0% |
| !!! | TAAATTTTTTTGAATTGAGT+GGG | + | tig0022967:59906-59925 | None:intergenic | 15.0% |
| !!! | ATAAATTTTTTTGAATTGAG+TGG | + | tig0022967:59907-59926 | None:intergenic | 15.0% |
| !!! | AAAAAATTTATTTTTGCCAT+TGG | - | tig0022967:59916-59935 | Msa1403560:CDS | 15.0% |
| !!! | TTGTTAATTTTTTTTCTTGA+GGG | - | tig0022967:61476-61495 | Msa1403560:intron | 15.0% |
| !!! | GGTTTTTTTTTTGTAATTGA+TGG | + | tig0022967:56396-56415 | None:intergenic | 20.0% |
| !! | TATAAATATTACTCATTCTG+TGG | + | tig0022967:56417-56436 | None:intergenic | 20.0% |
| !!! | TTATAAAATTGTGGCTTTTA+TGG | + | tig0022967:56481-56500 | None:intergenic | 20.0% |
| !!! | CTCTTTCTTTTATAAAATTG+TGG | + | tig0022967:56490-56509 | None:intergenic | 20.0% |
| !! | AATGGTATAGATTAAAGATA+GGG | + | tig0022967:56831-56850 | None:intergenic | 20.0% |
| !! | TAAACCTAAAACATATACTA+CGG | - | tig0022967:56931-56950 | Msa1403560:CDS | 20.0% |
| !!! | TTTAATGTGTATATGTTTTG+GGG | + | tig0022967:57099-57118 | None:intergenic | 20.0% |
| !! | AATCAATATACGAAAATTCA+CGG | + | tig0022967:57239-57258 | None:intergenic | 20.0% |
| !! | ATCTATTTGAAAAAAATAGC+CGG | + | tig0022967:59370-59389 | None:intergenic | 20.0% |
| !! | TGTCAATGTAAAGATAAATA+AGG | + | tig0022967:59574-59593 | None:intergenic | 20.0% |
| !! | TATAATATTATTGCTCAACT+TGG | - | tig0022967:59621-59640 | Msa1403560:CDS | 20.0% |
| !!! | TGTTTTTGTTTTTGTTTCTA+AGG | - | tig0022967:59717-59736 | Msa1403560:CDS | 20.0% |
| !!! | TTTTATTTTCATCTTGTTAC+TGG | - | tig0022967:59751-59770 | Msa1403560:CDS | 20.0% |
| !!! | TTTATTTTCATCTTGTTACT+GGG | - | tig0022967:59752-59771 | Msa1403560:CDS | 20.0% |
| !! | TATAAGCCATAGAAAATTAA+AGG | - | tig0022967:59826-59845 | Msa1403560:CDS | 20.0% |
| !!! | AAATTTTTTTGAATTGAGTG+GGG | + | tig0022967:59905-59924 | None:intergenic | 20.0% |
| !! | CTATTCTTTAATTATCTTTC+AGG | - | tig0022967:60283-60302 | Msa1403560:intron | 20.0% |
| !! | AGATTTATATGCATATGATA+TGG | + | tig0022967:60335-60354 | None:intergenic | 20.0% |
| !! | TAATAAACTGGTAAAAGAAA+AGG | + | tig0022967:61313-61332 | None:intergenic | 20.0% |
| !! | TTAAGTGCATAATAATAAAC+TGG | + | tig0022967:61325-61344 | None:intergenic | 20.0% |
| !! | ATTTCAGATGAAATTTCTTT+GGG | - | tig0022967:61357-61376 | Msa1403560:intron | 20.0% |
| !!! | CTTGTTAATTTTTTTTCTTG+AGG | - | tig0022967:61475-61494 | Msa1403560:intron | 20.0% |
| !!! | TGTTAATTTTTTTTCTTGAG+GGG | - | tig0022967:61477-61496 | Msa1403560:intron | 20.0% |
| ! | ACCATTATTACTGAAAAAAG+AGG | - | tig0022967:56348-56367 | Msa1403560:three_prime_UTR | 25.0% |
| !!! | ACCTCTTTTTTCAGTAATAA+TGG | + | tig0022967:56352-56371 | None:intergenic | 25.0% |
| ! | ATTATTACTGAAAAAAGAGG+TGG | - | tig0022967:56351-56370 | Msa1403560:three_prime_UTR | 25.0% |
| ! | CAAAAGAAAAATGACAGAAA+AGG | - | tig0022967:56747-56766 | Msa1403560:CDS | 25.0% |
| ! | CAATGGTATAGATTAAAGAT+AGG | + | tig0022967:56832-56851 | None:intergenic | 25.0% |
| ! | CTATCTTTAATCTATACCAT+TGG | - | tig0022967:56830-56849 | Msa1403560:CDS | 25.0% |
| !! | TGTAATTTTCATTATGTTCC+TGG | + | tig0022967:57199-57218 | None:intergenic | 25.0% |
| !!! | CATTTTTTCCACACATTTAT+GGG | + | tig0022967:58472-58491 | None:intergenic | 25.0% |
| ! | AATCATCAACCTTTATGTTT+GGG | + | tig0022967:58537-58556 | None:intergenic | 25.0% |
| ! | ATGAGAATGAAACTAAGAAA+GGG | - | tig0022967:58569-58588 | Msa1403560:CDS | 25.0% |
| ! | GTATCACTGATATACAAATA+CGG | - | tig0022967:59027-59046 | Msa1403560:CDS | 25.0% |
| !!! | GACACAAATACTTTTTAACA+GGG | - | tig0022967:59182-59201 | Msa1403560:CDS | 25.0% |
| ! | TCTATTTGAAAAAAATAGCC+GGG | + | tig0022967:59369-59388 | None:intergenic | 25.0% |
| !! | CTTTATTAATGTACTTGTTG+TGG | - | tig0022967:59404-59423 | Msa1403560:CDS | 25.0% |
| ! | AGAAAAAATAAAAGGTGATC+TGG | - | tig0022967:59533-59552 | Msa1403560:CDS | 25.0% |
| !! | TTATTTTCATCTTGTTACTG+GGG | - | tig0022967:59753-59772 | Msa1403560:CDS | 25.0% |
| ! | TTTCTATGGCTTATACAATA+GGG | + | tig0022967:59821-59840 | None:intergenic | 25.0% |
| !! | TTTTCTATGGCTTATACAAT+AGG | + | tig0022967:59822-59841 | None:intergenic | 25.0% |
| ! | TTTCAGTTATGCTAAAAGTA+AGG | + | tig0022967:59968-59987 | None:intergenic | 25.0% |
| !! | TAATCGTAATCCGAAATTTT+GGG | + | tig0022967:60130-60149 | None:intergenic | 25.0% |
| !! | ATAATCGTAATCCGAAATTT+TGG | + | tig0022967:60131-60150 | None:intergenic | 25.0% |
| !! | CATACTTCATATTGGATTTT+TGG | - | tig0022967:60184-60203 | Msa1403560:CDS | 25.0% |
| ! | CTTTAATTATCTTTCAGGAA+AGG | - | tig0022967:60288-60307 | Msa1403560:intron | 25.0% |
| ! | ATCATATGATTCTTTCAGTT+TGG | - | tig0022967:60697-60716 | Msa1403560:intron | 25.0% |
| ! | GATTTCAGATGAAATTTCTT+TGG | - | tig0022967:61356-61375 | Msa1403560:intron | 25.0% |
| ! | CATAAATCAGAACAAACATT+GGG | + | tig0022967:61418-61437 | None:intergenic | 25.0% |
| CATTTAATCGAGTATAAGCT+AGG | - | tig0022967:56626-56645 | Msa1403560:CDS | 30.0% | |
| GAGAAAACAACTTGAATCTT+AGG | - | tig0022967:56803-56822 | Msa1403560:CDS | 30.0% | |
| ! | TATACTCAACTGATTCAAGT+TGG | - | tig0022967:56879-56898 | Msa1403560:CDS | 30.0% |
| ! | ATTTGGACCACCTAAATTTT+GGG | + | tig0022967:56906-56925 | None:intergenic | 30.0% |
| ! | AATTTGGACCACCTAAATTT+TGG | + | tig0022967:56907-56926 | None:intergenic | 30.0% |
| CTGGTTGTTATGAGAATTTA+GGG | + | tig0022967:57347-57366 | None:intergenic | 30.0% | |
| TCTGGTTGTTATGAGAATTT+AGG | + | tig0022967:57348-57367 | None:intergenic | 30.0% | |
| !! | TTTGGTTTGTAGGTATCTAT+TGG | + | tig0022967:57630-57649 | None:intergenic | 30.0% |
| ! | GTAAAGATTAGGGATCTTTT+GGG | + | tig0022967:57849-57868 | None:intergenic | 30.0% |
| ! | TGTAAAGATTAGGGATCTTT+TGG | + | tig0022967:57850-57869 | None:intergenic | 30.0% |
| !!! | TTTTTGCTTCATTGAGTTGA+AGG | + | tig0022967:57963-57982 | None:intergenic | 30.0% |
| AGGACTTGATTATCAAATGT+AGG | - | tig0022967:58008-58027 | Msa1403560:intron | 30.0% | |
| GGACTTGATTATCAAATGTA+GGG | - | tig0022967:58009-58028 | Msa1403560:intron | 30.0% | |
| ! | TTTAGCAACTTTTGTTAGGA+AGG | + | tig0022967:58368-58387 | None:intergenic | 30.0% |
| !!! | GTGTTTTAGCAACTTTTGTT+AGG | + | tig0022967:58372-58391 | None:intergenic | 30.0% |
| !!! | GCATTTTTTCCACACATTTA+TGG | + | tig0022967:58473-58492 | None:intergenic | 30.0% |
| GAATCATCAACCTTTATGTT+TGG | + | tig0022967:58538-58557 | None:intergenic | 30.0% | |
| GATGAGAATGAAACTAAGAA+AGG | - | tig0022967:58568-58587 | Msa1403560:CDS | 30.0% | |
| TGAGAATGAAACTAAGAAAG+GGG | - | tig0022967:58570-58589 | Msa1403560:CDS | 30.0% | |
| AGATTTCAAAGCTTCTTCTA+AGG | - | tig0022967:58780-58799 | Msa1403560:CDS | 30.0% | |
| TTATGAAGCAACGAGAAAAT+TGG | - | tig0022967:58849-58868 | Msa1403560:CDS | 30.0% | |
| TGATACTAACACATCCATTA+AGG | + | tig0022967:59013-59032 | None:intergenic | 30.0% | |
| !! | CGACACAAATACTTTTTAAC+AGG | - | tig0022967:59181-59200 | Msa1403560:CDS | 30.0% |
| TGTTTGTCTGAACTTTATTC+TGG | - | tig0022967:59264-59283 | Msa1403560:CDS | 30.0% | |
| ATCTTTACATTGACATTGAG+TGG | - | tig0022967:59579-59598 | Msa1403560:CDS | 30.0% | |
| TCTTTACATTGACATTGAGT+GGG | - | tig0022967:59580-59599 | Msa1403560:CDS | 30.0% | |
| ! | TATTTTCATCTTGTTACTGG+GGG | - | tig0022967:59754-59773 | Msa1403560:CDS | 30.0% |
| !! | TATTTTTGCCATTGGTAGTT+CGG | - | tig0022967:59924-59943 | Msa1403560:CDS | 30.0% |
| TAGCATAACTGAAATTGATG+AGG | - | tig0022967:59974-59993 | Msa1403560:CDS | 30.0% | |
| AGCATAACTGAAATTGATGA+GGG | - | tig0022967:59975-59994 | Msa1403560:CDS | 30.0% | |
| ATGTTCAAACCCCAAAATTT+CGG | - | tig0022967:60117-60136 | Msa1403560:CDS | 30.0% | |
| ! | AATCGTAATCCGAAATTTTG+GGG | + | tig0022967:60129-60148 | None:intergenic | 30.0% |
| GTGAATACCACAAACAATAA+AGG | - | tig0022967:60159-60178 | Msa1403560:CDS | 30.0% | |
| TAAAGGCTCATACTTCATAT+TGG | - | tig0022967:60176-60195 | Msa1403560:CDS | 30.0% | |
| !! | GGATTTTTGGAAATCCTAAT+CGG | - | tig0022967:60197-60216 | Msa1403560:CDS | 30.0% |
| AATTATCTTTCAGGAAAGGT+TGG | - | tig0022967:60292-60311 | Msa1403560:intron | 30.0% | |
| TATTAATGGAGATTTCCAGA+AGG | - | tig0022967:60550-60569 | Msa1403560:intron | 30.0% | |
| AAGAGATGCAATAATGTCAA+AGG | + | tig0022967:60576-60595 | None:intergenic | 30.0% | |
| AATGCTGAAGGATAAAATCA+AGG | - | tig0022967:60637-60656 | Msa1403560:intron | 30.0% | |
| ATGATGAAGAGAAGGTAAAT+AGG | + | tig0022967:60682-60701 | None:intergenic | 30.0% | |
| AGAATCATATGATGAAGAGA+AGG | + | tig0022967:60690-60709 | None:intergenic | 30.0% | |
| TAGATAATTTCTCAGTCAAC+TGG | + | tig0022967:60880-60899 | None:intergenic | 30.0% | |
| TATGCACTTAATCTAGATTC+TGG | - | tig0022967:61334-61353 | Msa1403560:intron | 30.0% | |
| CCATAAATCAGAACAAACAT+TGG | + | tig0022967:61419-61438 | None:intergenic | 30.0% | |
| CCAATGTTTGTTCTGATTTA+TGG | - | tig0022967:61416-61435 | Msa1403560:intron | 30.0% | |
| AAAATGAGCCACAAAAATGC+AGG | + | tig0022967:56652-56671 | None:intergenic | 35.0% | |
| !! | CTTAAACAGGTTGTTGCTTT+GGG | + | tig0022967:56706-56725 | None:intergenic | 35.0% |
| ! | ACTTAAACAGGTTGTTGCTT+TGG | + | tig0022967:56707-56726 | None:intergenic | 35.0% |
| !! | TCAAGTTGGACCCAAAATTT+AGG | - | tig0022967:56893-56912 | Msa1403560:CDS | 35.0% |
| ! | GACACCGTAGTATATGTTTT+AGG | + | tig0022967:56938-56957 | None:intergenic | 35.0% |
| TAACATATGTCTTTGAGCAC+TGG | + | tig0022967:57070-57089 | None:intergenic | 35.0% | |
| CATTGTAAATTGGTACATCC+AGG | - | tig0022967:57178-57197 | Msa1403560:CDS | 35.0% | |
| TAACAACCAGACTAAACCAA+TGG | - | tig0022967:57357-57376 | Msa1403560:CDS | 35.0% | |
| TGAATAAACACAGAGAGAGA+CGG | + | tig0022967:57455-57474 | None:intergenic | 35.0% | |
| GGTTCATCATCAATATCAGT+GGG | + | tig0022967:57563-57582 | None:intergenic | 35.0% | |
| AGGTTCATCATCAATATCAG+TGG | + | tig0022967:57564-57583 | None:intergenic | 35.0% | |
| ! | CTATTGGCTGTATTGTTGTT+GGG | + | tig0022967:57614-57633 | None:intergenic | 35.0% |
| ! | TCTATTGGCTGTATTGTTGT+TGG | + | tig0022967:57615-57634 | None:intergenic | 35.0% |
| ! | CAGATTTAACAACACGCTTT+TGG | + | tig0022967:57685-57704 | None:intergenic | 35.0% |
| !! | AGATAAGCGTTTTGATGAGA+TGG | - | tig0022967:57709-57728 | Msa1403560:intron | 35.0% |
| ATTCTTGATCTGATCAACAG+TGG | + | tig0022967:57738-57757 | None:intergenic | 35.0% | |
| ATGCTATCAAGATCAATGAC+TGG | - | tig0022967:57756-57775 | Msa1403560:intron | 35.0% | |
| TGCTATCAAGATCAATGACT+GGG | - | tig0022967:57757-57776 | Msa1403560:intron | 35.0% | |
| GATCCCTAATCTTTACATCA+AGG | - | tig0022967:57853-57872 | Msa1403560:intron | 35.0% | |
| GAGCCTTGATGTAAAGATTA+GGG | + | tig0022967:57859-57878 | None:intergenic | 35.0% | |
| AGAGCCTTGATGTAAAGATT+AGG | + | tig0022967:57860-57879 | None:intergenic | 35.0% | |
| GAAGAACAATAAGCAATACG+AGG | - | tig0022967:57988-58007 | Msa1403560:intron | 35.0% | |
| AGGTTCAATGATCTCATCAT+CGG | + | tig0022967:58095-58114 | None:intergenic | 35.0% | |
| AAAAGCTTAGCAAGAAAGAC+AGG | - | tig0022967:58212-58231 | Msa1403560:intron | 35.0% | |
| CAAGAAGTTCAAAGAGATTC+TGG | - | tig0022967:58291-58310 | Msa1403560:intron | 35.0% | |
| !! | CATAAAGGTTGATGATTCTG+TGG | - | tig0022967:58540-58559 | Msa1403560:CDS | 35.0% |
| TGAATATGTTGAGAGACTCA+GGG | - | tig0022967:58699-58718 | Msa1403560:CDS | 35.0% | |
| CAATGCTTTCAAGATATTCC+TGG | + | tig0022967:58759-58778 | None:intergenic | 35.0% | |
| ! | CAGGAATATCTTGAAAGCAT+TGG | - | tig0022967:58757-58776 | Msa1403560:CDS | 35.0% |
| ! | TGAGGAGTTAAAAGGTTTTG+AGG | - | tig0022967:58909-58928 | Msa1403560:CDS | 35.0% |
| !!! | ATTAAGGTCCTGCTATTTTC+CGG | + | tig0022967:58997-59016 | None:intergenic | 35.0% |
| ! | AGTTAGGTCTATGTGCTTTT+CGG | - | tig0022967:59214-59233 | Msa1403560:CDS | 35.0% |
| TTGTCTGAACTTTATTCTGG+TGG | - | tig0022967:59267-59286 | Msa1403560:CDS | 35.0% | |
| ! | CTGGAGTCTTTTCATGATAA+CGG | + | tig0022967:59332-59351 | None:intergenic | 35.0% |
| CAAATAGATGTCTCATAGCA+TGG | - | tig0022967:59381-59400 | Msa1403560:CDS | 35.0% | |
| ATCAGATACAATGTAAGCAC+CGG | + | tig0022967:59441-59460 | None:intergenic | 35.0% | |
| !! | TTTCTTTAGAGCAGTGACAT+TGG | + | tig0022967:59489-59508 | None:intergenic | 35.0% |
| CTTTACATTGACATTGAGTG+GGG | - | tig0022967:59581-59600 | Msa1403560:CDS | 35.0% | |
| ! | GTGGGGATTAATCAATTTTG+AGG | - | tig0022967:59598-59617 | Msa1403560:CDS | 35.0% |
| TGTTAAACTCATAGAGCATG+AGG | - | tig0022967:59859-59878 | Msa1403560:CDS | 35.0% | |
| GTTAAACTCATAGAGCATGA+GGG | - | tig0022967:59860-59879 | Msa1403560:CDS | 35.0% | |
| TTAAACTCATAGAGCATGAG+GGG | - | tig0022967:59861-59880 | Msa1403560:CDS | 35.0% | |
| AAAAGTAAGGCACACTTTGT+TGG | + | tig0022967:59955-59974 | None:intergenic | 35.0% | |
| ! | CATGCTCTTATTTCACTACA+TGG | + | tig0022967:60025-60044 | None:intergenic | 35.0% |
| ! | TCACAGAAAGTTTTCTGTCT+TGG | - | tig0022967:60093-60112 | Msa1403560:CDS | 35.0% |
| GTATGAGCCTTTATTGTTTG+TGG | + | tig0022967:60169-60188 | None:intergenic | 35.0% | |
| AGTGAGAAACAAACATTCAC+CGG | - | tig0022967:60479-60498 | Msa1403560:CDS | 35.0% | |
| TCCATTAATAAGAACCCTTG+TGG | + | tig0022967:60540-60559 | None:intergenic | 35.0% | |
| TGACATTATTGCATCTCTTG+AGG | - | tig0022967:60577-60596 | Msa1403560:intron | 35.0% | |
| GTGTTCATAGTATTGTCAGT+AGG | - | tig0022967:60756-60775 | Msa1403560:intron | 35.0% | |
| TCAGAAATGTTGAACTCTCA+AGG | - | tig0022967:60837-60856 | Msa1403560:intron | 35.0% | |
| CAGAAATGTTGAACTCTCAA+GGG | - | tig0022967:60838-60857 | Msa1403560:intron | 35.0% | |
| ACTTGTCCTATTCTCAAACA+AGG | - | tig0022967:61047-61066 | Msa1403560:intron | 35.0% | |
| TAGAACTCCACTCTCTTCTT+CGG | + | tig0022967:56285-56304 | None:intergenic | 40.0% | |
| CTGAAAAAAGAGGTGGAATG+TGG | - | tig0022967:56358-56377 | Msa1403560:three_prime_UTR | 40.0% | |
| AGTTGGACCCAAAATTTAGG+TGG | - | tig0022967:56896-56915 | Msa1403560:CDS | 40.0% | |
| AACATATACTACGGTGTCCT+CGG | - | tig0022967:56940-56959 | Msa1403560:CDS | 40.0% | |
| AGCTGCAGTTTCTTCTTCAT+CGG | - | tig0022967:57288-57307 | Msa1403560:CDS | 40.0% | |
| TTGTTGGGTTCATCATCAAC+GGG | + | tig0022967:57599-57618 | None:intergenic | 40.0% | |
| GTTGTTGGGTTCATCATCAA+CGG | + | tig0022967:57600-57619 | None:intergenic | 40.0% | |
| !! | CTTCATTGAGTTGAAGGCTT+TGG | + | tig0022967:57957-57976 | None:intergenic | 40.0% |
| AGAAGTTTCAGAATCCGACA+CGG | + | tig0022967:58140-58159 | None:intergenic | 40.0% | |
| !! | GATTCTGAAACTTCTGAGCT+TGG | - | tig0022967:58145-58164 | Msa1403560:intron | 40.0% |
| ! | TTGCTAAGCTTTTGATCCCA+AGG | + | tig0022967:58205-58224 | None:intergenic | 40.0% |
| ! | TAGCAAGAAAGACAGGCTTT+TGG | - | tig0022967:58219-58238 | Msa1403560:intron | 40.0% |
| AAAAGCCTAGTGAGATCACA+TGG | - | tig0022967:58257-58276 | Msa1403560:intron | 40.0% | |
| AAAGCCTAGTGAGATCACAT+GGG | - | tig0022967:58258-58277 | Msa1403560:intron | 40.0% | |
| GCTCAGTTTGATGTTAATCC+AGG | - | tig0022967:58430-58449 | Msa1403560:intron | 40.0% | |
| AAAATGCGTGCAGAATATGC+TGG | - | tig0022967:58486-58505 | Msa1403560:CDS | 40.0% | |
| AAGAAAGGGGATGACTATGA+CGG | - | tig0022967:58583-58602 | Msa1403560:CDS | 40.0% | |
| CTGCAAGCTCTTGAAAAACT+CGG | + | tig0022967:58659-58678 | None:intergenic | 40.0% | |
| TCAACATATTCACGTGTGTG+GGG | + | tig0022967:58691-58710 | None:intergenic | 40.0% | |
| CTCAACATATTCACGTGTGT+GGG | + | tig0022967:58692-58711 | None:intergenic | 40.0% | |
| TCTCAACATATTCACGTGTG+TGG | + | tig0022967:58693-58712 | None:intergenic | 40.0% | |
| GTGAATATGTTGAGAGACTC+AGG | - | tig0022967:58698-58717 | Msa1403560:CDS | 40.0% | |
| TGTGCAAGAACAACAAACTG+AGG | + | tig0022967:58730-58749 | None:intergenic | 40.0% | |
| !! | TTCTAAGGTAGCCTTGAAGA+GGG | - | tig0022967:58795-58814 | Msa1403560:CDS | 40.0% |
| AATGAGTTCAACCCTCTTCA+AGG | + | tig0022967:58809-58828 | None:intergenic | 40.0% | |
| CATTTACTACAAACCGCATG+AGG | - | tig0022967:58825-58844 | Msa1403560:CDS | 40.0% | |
| GTTGCTTCATAAACCTCATG+CGG | + | tig0022967:58841-58860 | None:intergenic | 40.0% | |
| !! | AGATAATGGAGAGATGAGTG+AGG | - | tig0022967:58891-58910 | Msa1403560:CDS | 40.0% |
| GAGATGAGTGAGGAGTTAAA+AGG | - | tig0022967:58901-58920 | Msa1403560:CDS | 40.0% | |
| !!! | TTAAGGTCCTGCTATTTTCC+GGG | + | tig0022967:58996-59015 | None:intergenic | 40.0% |
| GGAAAATAGCAGGACCTTAA+TGG | - | tig0022967:58996-59015 | Msa1403560:CDS | 40.0% | |
| CAAACTCATCAAGAAGAGCA+TGG | + | tig0022967:59098-59117 | None:intergenic | 40.0% | |
| ACTCATAAGCAACAGATCAC+GGG | + | tig0022967:59127-59146 | None:intergenic | 40.0% | |
| GACTCATAAGCAACAGATCA+CGG | + | tig0022967:59128-59147 | None:intergenic | 40.0% | |
| GCAAGAAAATGTTCACCACA+TGG | - | tig0022967:59152-59171 | Msa1403560:CDS | 40.0% | |
| TTTGTGTCGAAATGTCCATG+TGG | + | tig0022967:59170-59189 | None:intergenic | 40.0% | |
| ! | GTTAGGTCTATGTGCTTTTC+GGG | - | tig0022967:59215-59234 | Msa1403560:CDS | 40.0% |
| CTGAACTTTATTCTGGTGGA+CGG | - | tig0022967:59271-59290 | Msa1403560:CDS | 40.0% | |
| ! | TGAACTTTATTCTGGTGGAC+GGG | - | tig0022967:59272-59291 | Msa1403560:CDS | 40.0% |
| TCATGAAAAGACTCCAGAAC+AGG | - | tig0022967:59335-59354 | Msa1403560:CDS | 40.0% | |
| GAATTGAGTGGGGTAAGAAA+AGG | + | tig0022967:59895-59914 | None:intergenic | 40.0% | |
| AGGAAAGGTTGGAAAGAAGA+CGG | - | tig0022967:60303-60322 | Msa1403560:intron | 40.0% | |
| GCATATAAATCTTGAGCTCC+TGG | - | tig0022967:60343-60362 | Msa1403560:intron | 40.0% | |
| !! | ATGTAAGATGCACTGATTCC+AGG | + | tig0022967:60364-60383 | None:intergenic | 40.0% |
| ACGCTTAGCATCATGAACAT+TGG | + | tig0022967:60420-60439 | None:intergenic | 40.0% | |
| AACTGTCAGGGATCATGTTA+TGG | - | tig0022967:60511-60530 | Msa1403560:intron | 40.0% | |
| GCCACAAGGGTTCTTATTAA+TGG | - | tig0022967:60536-60555 | Msa1403560:intron | 40.0% | |
| CAATAATGTCAAAGGCCTTC+TGG | + | tig0022967:60568-60587 | None:intergenic | 40.0% | |
| TTATTGCATCTCTTGAGGTG+TGG | - | tig0022967:60582-60601 | Msa1403560:intron | 40.0% | |
| !! | ATCCTTCAGCATTTCTAGCA+CGG | + | tig0022967:60630-60649 | None:intergenic | 40.0% |
| GCTGAAGGATAAAATCAAGG+AGG | - | tig0022967:60640-60659 | Msa1403560:intron | 40.0% | |
| GAAGGATAAAATCAAGGAGG+AGG | - | tig0022967:60643-60662 | Msa1403560:intron | 40.0% | |
| CTGACAATACTATGAACACG+AGG | + | tig0022967:60755-60774 | None:intergenic | 40.0% | |
| CAGTAGGATGATGATCAATG+AGG | - | tig0022967:60772-60791 | Msa1403560:intron | 40.0% | |
| CTGAAAATAATGCACCCAGT+TGG | + | tig0022967:60821-60840 | None:intergenic | 40.0% | |
| ATGAAAGAGCTACAGAAGCA+AGG | - | tig0022967:60915-60934 | Msa1403560:intron | 40.0% | |
| TCCTATTCTCAAACAAGGCA+AGG | - | tig0022967:61052-61071 | Msa1403560:intron | 40.0% | |
| !! | CTTCGTGTTAGTTTGTTGTG+TGG | - | tig0022967:61502-61521 | Msa1403560:CDS | 40.0% |
| GTTCTTCCTCCTCTATCTCA+CGG | + | tig0022967:56263-56282 | None:intergenic | 45.0% | |
| ! | AAGCTAGGCCTGCATTTTTG+TGG | - | tig0022967:56641-56660 | Msa1403560:CDS | 45.0% |
| TCAGTGCAGCCAAAGATATG+TGG | - | tig0022967:56772-56791 | Msa1403560:CDS | 45.0% | |
| CAGTGCAGCCAAAGATATGT+GGG | - | tig0022967:56773-56792 | Msa1403560:CDS | 45.0% | |
| CTCTCAAGCCCACATATCTT+TGG | + | tig0022967:56784-56803 | None:intergenic | 45.0% | |
| CTTTCTTAACCAGTACTCCG+AGG | + | tig0022967:56960-56979 | None:intergenic | 45.0% | |
| !!! | GGTTTTGTTTTGCGCGATGA+AGG | + | tig0022967:57326-57345 | None:intergenic | 45.0% |
| !! | TCGAAGCCATTGGTTTAGTC+TGG | + | tig0022967:57366-57385 | None:intergenic | 45.0% |
| AACCAATGGCTTCGAGATTC+TGG | - | tig0022967:57371-57390 | Msa1403560:CDS | 45.0% | |
| ! | TCAACGGGTTCAGTATCGTT+AGG | + | tig0022967:57584-57603 | None:intergenic | 45.0% |
| !! | CAACAACGGGTTTGGTTTGT+AGG | + | tig0022967:57640-57659 | None:intergenic | 45.0% |
| ! | ACTGTCATCAACAACGGGTT+TGG | + | tig0022967:57648-57667 | None:intergenic | 45.0% |
| TCGTCACTGTCATCAACAAC+GGG | + | tig0022967:57653-57672 | None:intergenic | 45.0% | |
| GTCGTCACTGTCATCAACAA+CGG | + | tig0022967:57654-57673 | None:intergenic | 45.0% | |
| GCTTGAAGATTTCCTTGCTC+AGG | - | tig0022967:57886-57905 | Msa1403560:intron | 45.0% | |
| TATTAGCAGAAGCCTGAGCA+AGG | + | tig0022967:57901-57920 | None:intergenic | 45.0% | |
| TGCTCAGGCTTCTGCTAATA+AGG | - | tig0022967:57901-57920 | Msa1403560:intron | 45.0% | |
| ! | TTGAAGGCTTTGGCATTGCT+GGG | + | tig0022967:57947-57966 | None:intergenic | 45.0% |
| TCATTGAACCTGATCAGCTC+AGG | - | tig0022967:58104-58123 | Msa1403560:intron | 45.0% | |
| GAAGTTTCAGAATCCGACAC+GGG | + | tig0022967:58139-58158 | None:intergenic | 45.0% | |
| !! | CTTCTGAGCTTGGTAATGAC+AGG | - | tig0022967:58155-58174 | Msa1403560:intron | 45.0% |
| ! | TCAAAGAGATTCTGGAAGCC+AGG | - | tig0022967:58299-58318 | Msa1403560:intron | 45.0% |
| ! | CAAAGAGATTCTGGAAGCCA+GGG | - | tig0022967:58300-58319 | Msa1403560:intron | 45.0% |
| ! | AAAGAGATTCTGGAAGCCAG+GGG | - | tig0022967:58301-58320 | Msa1403560:intron | 45.0% |
| ! | GCTGCAGATTCTTTTCAGTG+TGG | - | tig0022967:58402-58421 | Msa1403560:intron | 45.0% |
| ATGTTAATCCAGGCCTCAGT+GGG | - | tig0022967:58440-58459 | Msa1403560:intron | 45.0% | |
| GGCATATGCCCATAAATGTG+TGG | - | tig0022967:58461-58480 | Msa1403560:CDS | 45.0% | |
| AAGTTGCCCCAGACATGAAT+GGG | + | tig0022967:58610-58629 | None:intergenic | 45.0% | |
| TAAGTTGCCCCAGACATGAA+TGG | + | tig0022967:58611-58630 | None:intergenic | 45.0% | |
| TGTTCTTGCACAGAATGTCC+AGG | - | tig0022967:58738-58757 | Msa1403560:CDS | 45.0% | |
| !! | CTTCTAAGGTAGCCTTGAAG+AGG | - | tig0022967:58794-58813 | Msa1403560:CDS | 45.0% |
| ATGACCGTAGAGGGAGATAA+TGG | - | tig0022967:58877-58896 | Msa1403560:CDS | 45.0% | |
| CTCTCCATTATCTCCCTCTA+CGG | + | tig0022967:58884-58903 | None:intergenic | 45.0% | |
| AGTTCCGGGGTAACAACAAA+CGG | + | tig0022967:58952-58971 | None:intergenic | 45.0% | |
| AACAGGGCTATGTCACAGTT+AGG | - | tig0022967:59198-59217 | Msa1403560:CDS | 45.0% | |
| !!! | GTCTATGTGCTTTTCGGGTT+GGG | - | tig0022967:59220-59239 | Msa1403560:CDS | 45.0% |
| CCAGAACAGGTACTAAATCC+CGG | - | tig0022967:59348-59367 | Msa1403560:CDS | 45.0% | |
| TGTTGTGGTCAAGTGCATAC+CGG | - | tig0022967:59419-59438 | Msa1403560:CDS | 45.0% | |
| TTTCATCTTGTTACTGGGGG+AGG | - | tig0022967:59757-59776 | Msa1403560:CDS | 45.0% | |
| TTCATCTTGTTACTGGGGGA+GGG | - | tig0022967:59758-59777 | Msa1403560:CDS | 45.0% | |
| ! | TTGCCATTGGTAGTTCGGTT+TGG | - | tig0022967:59929-59948 | Msa1403560:CDS | 45.0% |
| ! | TACGGCAAAAGTTGCCGATT+AGG | + | tig0022967:60214-60233 | None:intergenic | 45.0% |
| GATTAAACCCTCACATGACC+CGG | + | tig0022967:60247-60266 | None:intergenic | 45.0% | |
| TCTTACATCTGCTATGCTGC+TGG | - | tig0022967:60376-60395 | Msa1403560:intron | 45.0% | |
| ! | TGAACATTGGCTGCCATGTT+GGG | + | tig0022967:60407-60426 | None:intergenic | 45.0% |
| ! | ATGAACATTGGCTGCCATGT+TGG | + | tig0022967:60408-60427 | None:intergenic | 45.0% |
| TCTCACTGACCTCAAGTAAG+CGG | + | tig0022967:60466-60485 | None:intergenic | 45.0% | |
| ACATGATCCCTGACAGTTTC+AGG | + | tig0022967:60509-60528 | None:intergenic | 45.0% | |
| ATCATGTTATGGCTGCCACA+AGG | - | tig0022967:60522-60541 | Msa1403560:intron | 45.0% | |
| TCATGTTATGGCTGCCACAA+GGG | - | tig0022967:60523-60542 | Msa1403560:intron | 45.0% | |
| AGAGCTACAGAAGCAAGGTT+AGG | - | tig0022967:60920-60939 | Msa1403560:intron | 45.0% | |
| !! | GCCTTGCCTTGTTTGAGAAT+AGG | + | tig0022967:61056-61075 | None:intergenic | 45.0% |
| GCATTATCGTTCAGTCAAGC+TGG | - | tig0022967:61106-61125 | Msa1403560:intron | 45.0% | |
| TTATCGTTCAGTCAAGCTGG+TGG | - | tig0022967:61109-61128 | Msa1403560:intron | 45.0% | |
| TATCGTTCAGTCAAGCTGGT+GGG | - | tig0022967:61110-61129 | Msa1403560:intron | 45.0% | |
| AGAATTCAGGGAGGACTCAA+GGG | - | tig0022967:61179-61198 | Msa1403560:intron | 45.0% | |
| TCAAGGGGGTTCAACATTGA+GGG | - | tig0022967:61195-61214 | Msa1403560:intron | 45.0% | |
| CAGAACAAACATTGGGAGCT+GGG | + | tig0022967:61411-61430 | None:intergenic | 45.0% | |
| TCAGAACAAACATTGGGAGC+TGG | + | tig0022967:61412-61431 | None:intergenic | 45.0% | |
| !!! | ATTTTATTTTTATAAAATTG+TGG | + | tig0022967:56547-56566 | None:intergenic | 5.0% |
| !! | TTATTATTATTATTATTCTT+AGG | - | tig0022967:57511-57530 | Msa1403560:intron | 5.0% |
| !! | TATTATTATTATTATTCTTA+GGG | - | tig0022967:57512-57531 | Msa1403560:intron | 5.0% |
| TGACAGACACCGTGAGATAG+AGG | - | tig0022967:56251-56270 | Msa1403560:three_prime_UTR | 50.0% | |
| GGAAGAACCGAAGAAGAGAG+TGG | - | tig0022967:56275-56294 | Msa1403560:three_prime_UTR | 50.0% | |
| GTCCAGAATCTCGAAGCCAT+TGG | + | tig0022967:57376-57395 | None:intergenic | 50.0% | |
| GATGACAGTGACGACGATGA+TGG | - | tig0022967:57659-57678 | Msa1403560:intron | 50.0% | |
| GCTGGGACTCATCTTCTTCT+TGG | + | tig0022967:57930-57949 | None:intergenic | 50.0% | |
| ! | GTTGAAGGCTTTGGCATTGC+TGG | + | tig0022967:57948-57967 | None:intergenic | 50.0% |
| GGAAAAGGATGACGAGGATG+AGG | - | tig0022967:58051-58070 | Msa1403560:intron | 50.0% | |
| !! | TGATGATGGCGATGCTCCTT+GGG | - | tig0022967:58186-58205 | Msa1403560:intron | 50.0% |
| GTGTCCCATGTGATCTCACT+AGG | + | tig0022967:58265-58284 | None:intergenic | 50.0% | |
| GGGAACTGGAAGGTTTGAAC+AGG | - | tig0022967:58330-58349 | Msa1403560:intron | 50.0% | |
| AGAATCTGCAGCTTCTGAGC+AGG | + | tig0022967:58394-58413 | None:intergenic | 50.0% | |
| GATGTTAATCCAGGCCTCAG+TGG | - | tig0022967:58439-58458 | Msa1403560:intron | 50.0% | |
| TTATGGGCATATGCCCACTG+AGG | + | tig0022967:58456-58475 | None:intergenic | 50.0% | |
| CGTGCAGCACCCAAACATAA+AGG | - | tig0022967:58525-58544 | Msa1403560:CDS | 50.0% | |
| !! | ATGACGGACCCATTCATGTC+TGG | - | tig0022967:58599-58618 | Msa1403560:CDS | 50.0% |
| ! | TGACGGACCCATTCATGTCT+GGG | - | tig0022967:58600-58619 | Msa1403560:CDS | 50.0% |
| ATTGGCTGAGATGACCGTAG+AGG | - | tig0022967:58867-58886 | Msa1403560:CDS | 50.0% | |
| TTGGCTGAGATGACCGTAGA+GGG | - | tig0022967:58868-58887 | Msa1403560:CDS | 50.0% | |
| !! | TGCTCCGTTTGTTGTTACCC+CGG | - | tig0022967:58945-58964 | Msa1403560:CDS | 50.0% |
| TGTTGTTACCCCGGAACTTG+TGG | - | tig0022967:58954-58973 | Msa1403560:CDS | 50.0% | |
| !!! | CTGCTATTTTCCGGGAAGGT+GGG | + | tig0022967:58988-59007 | None:intergenic | 50.0% |
| !!! | GGTCTATGTGCTTTTCGGGT+TGG | - | tig0022967:59219-59238 | Msa1403560:CDS | 50.0% |
| ! | TTATTCTGGTGGACGGGTGA+AGG | - | tig0022967:59278-59297 | Msa1403560:CDS | 50.0% |
| GTGAAGGAATTGCTTGCGCA+AGG | - | tig0022967:59294-59313 | Msa1403560:CDS | 50.0% | |
| CCGGGATTTAGTACCTGTTC+TGG | + | tig0022967:59351-59370 | None:intergenic | 50.0% | |
| TCATCTTGTTACTGGGGGAG+GGG | - | tig0022967:59759-59778 | Msa1403560:CDS | 50.0% | |
| TGGCCAAACCGAACTACCAA+TGG | + | tig0022967:59935-59954 | None:intergenic | 50.0% | |
| TCTATCTACCGGGTCATGTG+AGG | - | tig0022967:60236-60255 | Msa1403560:CDS | 50.0% | |
| CTATCTACCGGGTCATGTGA+GGG | - | tig0022967:60237-60256 | Msa1403560:CDS | 50.0% | |
| GAATTTCCGCCGCTTACTTG+AGG | - | tig0022967:60454-60473 | Msa1403560:CDS | 50.0% | |
| TGATCCCTGACAGTTTCAGG+AGG | + | tig0022967:60506-60525 | None:intergenic | 50.0% | |
| CACCGTGCTAGAAATGCTGA+AGG | - | tig0022967:60625-60644 | Msa1403560:intron | 50.0% | |
| !! | AAATCAAGGAGGAGGCGCTT+AGG | - | tig0022967:60651-60670 | Msa1403560:intron | 50.0% |
| ATGAGGAGCTTCATGCAAGC+TGG | - | tig0022967:60789-60808 | Msa1403560:intron | 50.0% | |
| TGAGGAGCTTCATGCAAGCT+GGG | - | tig0022967:60790-60809 | Msa1403560:intron | 50.0% | |
| ! | TGTTGAACTCTCAAGGGTGC+AGG | - | tig0022967:60844-60863 | Msa1403560:intron | 50.0% |
| GCTACAGAAGCAAGGTTAGG+CGG | - | tig0022967:60923-60942 | Msa1403560:intron | 50.0% | |
| TCTCAAACAAGGCAAGGCAG+TGG | - | tig0022967:61058-61077 | Msa1403560:intron | 50.0% | |
| GAGGCGGCTATCAGAATTCA+GGG | - | tig0022967:61167-61186 | Msa1403560:intron | 50.0% | |
| CAGAATTCAGGGAGGACTCA+AGG | - | tig0022967:61178-61197 | Msa1403560:intron | 50.0% | |
| GAATTCAGGGAGGACTCAAG+GGG | - | tig0022967:61180-61199 | Msa1403560:intron | 50.0% | |
| AATTCAGGGAGGACTCAAGG+GGG | - | tig0022967:61181-61200 | Msa1403560:intron | 50.0% | |
| CTCAAGGGGGTTCAACATTG+AGG | - | tig0022967:61194-61213 | Msa1403560:intron | 50.0% | |
| CAAGGGGGTTCAACATTGAG+GGG | - | tig0022967:61196-61215 | Msa1403560:intron | 50.0% | |
| !! | GCGGGTAGAAGTATCTACGT+GGG | + | tig0022967:61224-61243 | None:intergenic | 50.0% |
| !! | TGCGGGTAGAAGTATCTACG+TGG | + | tig0022967:61225-61244 | None:intergenic | 50.0% |
| CGTAGATACTTCTACCCGCA+TGG | - | tig0022967:61225-61244 | Msa1403560:intron | 50.0% | |
| !! | TACCCGCATGGTTAGCCTTA+GGG | - | tig0022967:61237-61256 | Msa1403560:intron | 50.0% |
| CAGACACCGTGAGATAGAGG+AGG | - | tig0022967:56254-56273 | Msa1403560:three_prime_UTR | 55.0% | |
| GGCTTCGAGATTCTGGACAC+AGG | - | tig0022967:57378-57397 | Msa1403560:CDS | 55.0% | |
| TAGGGAGAGTCCTGAGAGTG+AGG | - | tig0022967:58027-58046 | Msa1403560:intron | 55.0% | |
| AGGGAGAGTCCTGAGAGTGA+GGG | - | tig0022967:58028-58047 | Msa1403560:intron | 55.0% | |
| TCCTGAGAGTGAGGGGGAAA+AGG | - | tig0022967:58036-58055 | Msa1403560:intron | 55.0% | |
| ! | TCCTTTTCCCCCTCACTCTC+AGG | + | tig0022967:58040-58059 | None:intergenic | 55.0% |
| TGAGGGGGAAAAGGATGACG+AGG | - | tig0022967:58045-58064 | Msa1403560:intron | 55.0% | |
| ACCTGATCAGCTCAGGAAGC+CGG | - | tig0022967:58111-58130 | Msa1403560:intron | 55.0% | |
| !! | CTTGGTAATGACAGGCCTCC+TGG | - | tig0022967:58163-58182 | Msa1403560:intron | 55.0% |
| !! | GTGATGATGGCGATGCTCCT+TGG | - | tig0022967:58185-58204 | Msa1403560:intron | 55.0% |
| GACGGACCCATTCATGTCTG+GGG | - | tig0022967:58601-58620 | Msa1403560:CDS | 55.0% | |
| !!! | CCTGCTATTTTCCGGGAAGG+TGG | + | tig0022967:58989-59008 | None:intergenic | 55.0% |
| CCACCTTCCCGGAAAATAGC+AGG | - | tig0022967:58986-59005 | Msa1403560:CDS | 55.0% | |
| !!! | GGTCCTGCTATTTTCCGGGA+AGG | + | tig0022967:58992-59011 | None:intergenic | 55.0% |
| !!! | ATGTGCTTTTCGGGTTGGGC+TGG | - | tig0022967:59224-59243 | Msa1403560:CDS | 55.0% |
| CATCTTGTTACTGGGGGAGG+GGG | - | tig0022967:59760-59779 | Msa1403560:CDS | 55.0% | |
| ATAGAGCATGAGGGGAAGCG+TGG | - | tig0022967:59869-59888 | Msa1403560:CDS | 55.0% | |
| GCTGCTGGAAGTTCCCAACA+TGG | - | tig0022967:60391-60410 | Msa1403560:intron | 55.0% | |
| CACTGACCTCAAGTAAGCGG+CGG | + | tig0022967:60463-60482 | None:intergenic | 55.0% | |
| CCTGACAGTTTCAGGAGGAC+CGG | + | tig0022967:60501-60520 | None:intergenic | 55.0% | |
| CGGTCCTCCTGAAACTGTCA+GGG | - | tig0022967:60499-60518 | Msa1403560:CDS | 55.0% | |
| CAAGCTGGGATCAGCCAACT+GGG | - | tig0022967:60804-60823 | Msa1403560:intron | 55.0% | |
| ! | ACTCTCAAGGGTGCAGGCTT+TGG | - | tig0022967:60850-60869 | Msa1403560:intron | 55.0% |
| ACAGAAGCAAGGTTAGGCGG+CGG | - | tig0022967:60926-60945 | Msa1403560:intron | 55.0% | |
| TGCCTCCAAGGCGAAGAGAT+GGG | - | tig0022967:60960-60979 | Msa1403560:intron | 55.0% | |
| !! | GGTGGTAGTGGAACGTCTTC+AGG | - | tig0022967:61010-61029 | Msa1403560:intron | 55.0% |
| !! | GGTAGTGGAACGTCTTCAGG+TGG | - | tig0022967:61013-61032 | Msa1403560:intron | 55.0% |
| GGCAGTGGACGTACAGGATA+CGG | - | tig0022967:61073-61092 | Msa1403560:intron | 55.0% | |
| AGTGGACGTACAGGATACGG+TGG | - | tig0022967:61076-61095 | Msa1403560:intron | 55.0% | |
| TTCAGTCAAGCTGGTGGGAG+TGG | - | tig0022967:61115-61134 | Msa1403560:intron | 55.0% | |
| ! | GTGGCGGCTATTCTAGAGGA+CGG | - | tig0022967:61134-61153 | Msa1403560:intron | 55.0% |
| ! | TGGCGGCTATTCTAGAGGAC+GGG | - | tig0022967:61135-61154 | Msa1403560:intron | 55.0% |
| TCTAGAGGACGGGGAACGAT+TGG | - | tig0022967:61145-61164 | Msa1403560:intron | 55.0% | |
| GGAGGCGGCTATCAGAATTC+AGG | - | tig0022967:61166-61185 | Msa1403560:intron | 55.0% | |
| GCGGCTATCAGAATTCAGGG+AGG | - | tig0022967:61170-61189 | Msa1403560:intron | 55.0% | |
| !! | CTACCCGCATGGTTAGCCTT+AGG | - | tig0022967:61236-61255 | Msa1403560:intron | 55.0% |
| !! | ACCCGCATGGTTAGCCTTAG+GGG | - | tig0022967:61238-61257 | Msa1403560:intron | 55.0% |
| TCCCCTAAGGCTAACCATGC+GGG | + | tig0022967:61242-61261 | None:intergenic | 55.0% | |
| CTCCCCTAAGGCTAACCATG+CGG | + | tig0022967:61243-61262 | None:intergenic | 55.0% | |
| GTCAAGCACGAACTCCCCTA+AGG | + | tig0022967:61255-61274 | None:intergenic | 55.0% | |
| CAAACATTGGGAGCTGGGAG+AGG | + | tig0022967:61406-61425 | None:intergenic | 55.0% | |
| CTACGGTGTCCTCGGAGTAC+TGG | - | tig0022967:56948-56967 | Msa1403560:CDS | 60.0% | |
| GGGAGAGTCCTGAGAGTGAG+GGG | - | tig0022967:58029-58048 | Msa1403560:intron | 60.0% | |
| GGAGAGTCCTGAGAGTGAGG+GGG | - | tig0022967:58030-58049 | Msa1403560:intron | 60.0% | |
| TCCGGCTTCCTGAGCTGATC+AGG | + | tig0022967:58115-58134 | None:intergenic | 60.0% | |
| TCAGAATCCGACACGGGCTC+CGG | + | tig0022967:58133-58152 | None:intergenic | 60.0% | |
| ! | GACAGGCCTCCTGGTGATGA+TGG | - | tig0022967:58172-58191 | Msa1403560:intron | 60.0% |
| GCATCGCCATCATCACCAGG+AGG | + | tig0022967:58181-58200 | None:intergenic | 60.0% | |
| !! | GGAGCATCGCCATCATCACC+AGG | + | tig0022967:58184-58203 | None:intergenic | 60.0% |
| ! | AGATTCTGGAAGCCAGGGGC+AGG | - | tig0022967:58305-58324 | Msa1403560:intron | 60.0% |
| TTACCCCGGAACTTGTGGCG+CGG | - | tig0022967:58959-58978 | Msa1403560:CDS | 60.0% | |
| TTTCCGCGCCACAAGTTCCG+GGG | + | tig0022967:58965-58984 | None:intergenic | 60.0% | |
| GTTTCCGCGCCACAAGTTCC+GGG | + | tig0022967:58966-58985 | None:intergenic | 60.0% | |
| GGTTTCCGCGCCACAAGTTC+CGG | + | tig0022967:58967-58986 | None:intergenic | 60.0% | |
| !! | GGGCTGGTTTCTGAAGCGCA+TGG | - | tig0022967:59240-59259 | Msa1403560:CDS | 60.0% |
| CCGGTCCTCCTGAAACTGTC+AGG | - | tig0022967:60498-60517 | Msa1403560:CDS | 60.0% | |
| GCAAGCTGGGATCAGCCAAC+TGG | - | tig0022967:60803-60822 | Msa1403560:intron | 60.0% | |
| AAGCAAGGTTAGGCGGCGGT+GGG | - | tig0022967:60930-60949 | Msa1403560:intron | 60.0% | |
| !! | GTGGGTTGGATCTGCCTCCA+AGG | - | tig0022967:60948-60967 | Msa1403560:intron | 60.0% |
| CTGCCTCCAAGGCGAAGAGA+TGG | - | tig0022967:60959-60978 | Msa1403560:intron | 60.0% | |
| TGCCCATCTCTTCGCCTTGG+AGG | + | tig0022967:60965-60984 | None:intergenic | 60.0% | |
| TCCAAGGCGAAGAGATGGGC+AGG | - | tig0022967:60964-60983 | Msa1403560:intron | 60.0% | |
| TCCTGCCCATCTCTTCGCCT+TGG | + | tig0022967:60968-60987 | None:intergenic | 60.0% | |
| GATTATGCCGCTGCAGCTGC+TGG | - | tig0022967:60986-61005 | Msa1403560:intron | 60.0% | |
| GTGGAACGTCTTCAGGTGGC+AGG | - | tig0022967:61017-61036 | Msa1403560:intron | 60.0% | |
| GAACGTCTTCAGGTGGCAGG+TGG | - | tig0022967:61020-61039 | Msa1403560:intron | 60.0% | |
| AGGCAAGGCAGTGGACGTAC+AGG | - | tig0022967:61067-61086 | Msa1403560:intron | 60.0% | |
| GGACGTACAGGATACGGTGG+AGG | - | tig0022967:61079-61098 | Msa1403560:intron | 60.0% | |
| AGTCAAGCTGGTGGGAGTGG+CGG | - | tig0022967:61118-61137 | Msa1403560:intron | 60.0% | |
| GGGAGTGGCGGCTATTCTAG+AGG | - | tig0022967:61130-61149 | Msa1403560:intron | 60.0% | |
| ! | GGCGGCTATTCTAGAGGACG+GGG | - | tig0022967:61136-61155 | Msa1403560:intron | 60.0% |
| AGAGGACGGGGAACGATTGG+AGG | - | tig0022967:61148-61167 | Msa1403560:intron | 60.0% | |
| CATTGGGAGCTGGGAGAGGA+GGG | + | tig0022967:61402-61421 | None:intergenic | 60.0% | |
| ACATTGGGAGCTGGGAGAGG+AGG | + | tig0022967:61403-61422 | None:intergenic | 60.0% | |
| TCTGGAAGCCAGGGGCAGGA+AGG | - | tig0022967:58309-58328 | Msa1403560:intron | 65.0% | |
| CTGGAAGCCAGGGGCAGGAA+GGG | - | tig0022967:58310-58329 | Msa1403560:intron | 65.0% | |
| TCCAGTTCCCTTCCTGCCCC+TGG | + | tig0022967:58320-58339 | None:intergenic | 65.0% | |
| GGGGCAGGAAGGGAACTGGA+AGG | - | tig0022967:58320-58339 | Msa1403560:intron | 65.0% | |
| GGCATATGCCCACTGAGGCC+TGG | + | tig0022967:58451-58470 | None:intergenic | 65.0% | |
| GAAGCAAGGTTAGGCGGCGG+TGG | - | tig0022967:60929-60948 | Msa1403560:intron | 65.0% | |
| AAGGTTAGGCGGCGGTGGGT+TGG | - | tig0022967:60934-60953 | Msa1403560:intron | 65.0% | |
| TATGCCGCTGCAGCTGCTGG+TGG | - | tig0022967:60989-61008 | Msa1403560:intron | 65.0% | |
| ACCACCACCAGCAGCTGCAG+CGG | + | tig0022967:60996-61015 | None:intergenic | 65.0% | |
| !! | GCAGCTGCTGGTGGTGGTAG+TGG | - | tig0022967:60998-61017 | Msa1403560:intron | 65.0% |
| GGACGGGGAACGATTGGAGG+CGG | - | tig0022967:61151-61170 | Msa1403560:intron | 65.0% | |
| CAGGAAGCCGGAGCCCGTGT+CGG | - | tig0022967:58123-58142 | Msa1403560:intron | 70.0% | |
| GCCAGGGGCAGGAAGGGAAC+TGG | - | tig0022967:58316-58335 | Msa1403560:intron | 70.0% | |
| GGCGCGGAAACCCACCTTCC+CGG | - | tig0022967:58975-58994 | Msa1403560:CDS | 70.0% | |
| GCCGCTGCAGCTGCTGGTGG+TGG | - | tig0022967:60992-61011 | Msa1403560:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022967 | gene | 56234 | 61570 | 56234 | ID=Msa1403560;Name=Msa1403560 |
| tig0022967 | mRNA | 56234 | 61570 | 56234 | ID=Msa1403560-mRNA-1;Parent=Msa1403560;Name=Msa1403560-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.66|0.5|0.75|1|1|4|297|997 |
| tig0022967 | exon | 56234 | 57499 | 56234 | ID=Msa1403560-mRNA-1:exon:19368;Parent=Msa1403560-mRNA-1 |
| tig0022967 | exon | 58448 | 60271 | 58448 | ID=Msa1403560-mRNA-1:exon:19367;Parent=Msa1403560-mRNA-1 |
| tig0022967 | exon | 60405 | 60521 | 60405 | ID=Msa1403560-mRNA-1:exon:19366;Parent=Msa1403560-mRNA-1 |
| tig0022967 | exon | 61487 | 61570 | 61487 | ID=Msa1403560-mRNA-1:exon:19365;Parent=Msa1403560-mRNA-1 |
| tig0022967 | CDS | 61487 | 61570 | 61487 | ID=Msa1403560-mRNA-1:cds;Parent=Msa1403560-mRNA-1 |
| tig0022967 | CDS | 60405 | 60521 | 60405 | ID=Msa1403560-mRNA-1:cds;Parent=Msa1403560-mRNA-1 |
| tig0022967 | CDS | 58448 | 60271 | 58448 | ID=Msa1403560-mRNA-1:cds;Parent=Msa1403560-mRNA-1 |
| tig0022967 | CDS | 56531 | 57499 | 56531 | ID=Msa1403560-mRNA-1:cds;Parent=Msa1403560-mRNA-1 |
| tig0022967 | three_prime_UTR | 56234 | 56530 | 56234 | ID=Msa1403560-mRNA-1:three_prime_utr;Parent=Msa1403560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
