AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0181890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 101 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATACTTGTATGGCTTCTT+TGG 0.197226 1_4:-70177799 Msa0181890:CDS
TAGTGGTAAGGTGGTGAAAC+TGG 0.257312 1_4:-70177163 Msa0181890:three_prime_UTR
TTCACCTCCACCACCTTCTA+AGG 0.264483 1_4:+70177102 Msa0181880:CDS
AATACTTGTATGGCTTCTTT+GGG 0.285921 1_4:-70177798 Msa0181890:CDS
TAATGGTAAGGTGGTGAAAC+TGG 0.314166 1_4:-70177247 Msa0181890:three_prime_UTR
TAATGGTAAGGTGGTGAAAC+TGG 0.314166 1_4:-70177331 Msa0181890:CDS
TAATGGTAAGGTGGTGAAAC+TGG 0.314166 1_4:-70177415 Msa0181890:CDS
GGATGAGGGTGTGGGTAGTA+TGG 0.323051 1_4:-70177718 Msa0181890:CDS
GGAGGAGGTGAATGGTAAAC+TGG 0.336861 1_4:-70177775 Msa0181890:CDS
GGATATTTCTTGGGTGGTGG+TGG 0.369617 1_4:-70177361 Msa0181890:CDS
CCCACTATCTAGTGAGGTTA+AGG 0.372842 1_4:+70176962 Msa0181880:five_prime_UTR
TGAGGGTGTGGGTAGTATGG+AGG 0.378864 1_4:-70177715 Msa0181890:CDS
GGGTGTGGGTAGTATGGAGG+TGG 0.383520 1_4:-70177712 Msa0181890:CDS
ACCTTTGGTGGTGGTGAGAC+TGG 0.390542 1_4:-70177133 Msa0181890:three_prime_UTR
ACTGGAGGGTACACCTTAGA+AGG 0.398297 1_4:-70177115 Msa0181890:three_prime_UTR
GAATGTGGAGGATATTTCTT+GGG 0.418597 1_4:-70177370 Msa0181890:CDS
GTGTGGGTAGTATGGAGGTG+GGG 0.426235 1_4:-70177710 Msa0181890:CDS
TGAATGTGGAGGATATTTCT+TGG 0.465455 1_4:-70177371 Msa0181890:CDS
GGTGTGGGTAGTATGGAGGT+GGG 0.467258 1_4:-70177711 Msa0181890:CDS
ACCTTGGGTGGTGGTGAATG+TGG 0.471435 1_4:-70177301 Msa0181890:CDS
ACCTTGGGTGGTGGTGAATG+TGG 0.471435 1_4:-70177385 Msa0181890:CDS
TGCTGAAATTTGAGATGGTA+TGG 0.471902 1_4:-70177062 Msa0181890:three_prime_UTR
TGTGGGTAGTATGGAGGTGG+GGG 0.475070 1_4:-70177709 Msa0181890:CDS
GAATGTGGAGGGTACACCTT+AGG 0.485101 1_4:-70177202 Msa0181890:three_prime_UTR
GAAACTGGAGGGTACACCTT+GGG 0.488549 1_4:-70177316 Msa0181890:CDS
GAAACTGGAGGGTACACCTT+GGG 0.488549 1_4:-70177400 Msa0181890:CDS
GAAACTGGAGGGTACACCTT+TGG 0.494998 1_4:-70177148 Msa0181890:three_prime_UTR
GAAACTGGAGGGTACACCTT+TGG 0.494998 1_4:-70177232 Msa0181890:three_prime_UTR
GGAGGATATTTCTTGGGTGG+TGG 0.495201 1_4:-70177364 Msa0181890:CDS
GGGTACACCTTAGGTGGTGG+TGG 0.497704 1_4:-70177277 Msa0181890:exon
ACCTTTGGTGGTGGTGAATG+TGG 0.500358 1_4:-70177217 Msa0181890:three_prime_UTR
CTCTTCACCACCACCTCCTA+AGG 0.503282 1_4:+70177186 Msa0181880:CDS
CTCTTCACCACCACCACCTA+AGG 0.503282 1_4:+70177270 Msa0181880:CDS
AGGTGAATGGTAAACTGGAT+GGG 0.503579 1_4:-70177770 Msa0181890:CDS
GAATGTGGAGGGTACACCTT+AGG 0.503938 1_4:-70177286 Msa0181890:exon
GGTGAGTACACTGGTGGTGG+TGG 0.504002 1_4:-70177445 Msa0181890:CDS
TAAGGGTGATATGGAGGTGG+AGG 0.508753 1_4:-70177826 None:intergenic
GGAGGAGATGAATACTTGTA+TGG 0.523317 1_4:-70177808 Msa0181890:CDS
TAGAAGAGTCAAAGTGGCAG+AGG 0.523614 1_4:-70177020 Msa0181890:three_prime_UTR
TGTGGAGGATATTTCTTGGG+TGG 0.526885 1_4:-70177367 Msa0181890:CDS
GAGGTGAATGGTAAACTGGA+TGG 0.530260 1_4:-70177771 Msa0181890:CDS
TTGGGTGGTGGTGAATGTGG+AGG 0.534949 1_4:-70177298 Msa0181890:CDS
GGTGAATGGTAAACTGGATG+GGG 0.542361 1_4:-70177769 Msa0181890:CDS
TCCAGTCTCACCACCACCAA+AGG 0.547428 1_4:+70177132 Msa0181880:CDS
GGTGGTGAGTACACTGGTGG+TGG 0.551187 1_4:-70177448 Msa0181890:CDS
GGTGGTGAAGAGTAGTGGTA+AGG 0.551515 1_4:-70177175 Msa0181890:three_prime_UTR
ACTGGAGGGTACACCTTTGG+TGG 0.558296 1_4:-70177145 Msa0181890:three_prime_UTR
ACTGGAGGGTACACCTTTGG+TGG 0.558296 1_4:-70177229 Msa0181890:three_prime_UTR
TGGGTGGTGGTGAATGTGGA+GGG 0.560943 1_4:-70177297 Msa0181890:CDS
TACTTGTATGGCTTCTTTGG+GGG 0.561140 1_4:-70177796 Msa0181890:CDS
GGATAAGGGTGATATGGAGG+TGG 0.563177 1_4:-70177829 None:intergenic
TTGGTGGTGGTGAGACTGGA+GGG 0.563876 1_4:-70177129 Msa0181890:three_prime_UTR
GGAGGGTACACCTTGGGTGG+TGG 0.570778 1_4:-70177310 Msa0181890:CDS
GGAGGGTACACCTTGGGTGG+TGG 0.570778 1_4:-70177394 Msa0181890:CDS
TCCACATTCACCACCACCAA+AGG 0.573001 1_4:+70177216 Msa0181880:intron
ATACTTGTATGGCTTCTTTG+GGG 0.577791 1_4:-70177797 Msa0181890:CDS
TCCACATTCACCACCACCCA+AGG 0.577927 1_4:+70177300 Msa0181880:CDS
TCCACATTCACCACCACCCA+AGG 0.577927 1_4:+70177384 Msa0181880:CDS
GGAGGGTACACCTTAGGTGG+TGG 0.577996 1_4:-70177280 Msa0181890:exon
TTTGGTGGTGGTGAATGTGG+AGG 0.580085 1_4:-70177214 Msa0181890:three_prime_UTR
AGCTAATAGAAGAGTCAAAG+TGG 0.586530 1_4:-70177026 Msa0181890:three_prime_UTR
GAGGTGGTGGTGAAGAGTAG+TGG 0.590130 1_4:-70177180 Msa0181890:three_prime_UTR
TTTGGTGGTGGTGAGACTGG+AGG 0.593407 1_4:-70177130 Msa0181890:three_prime_UTR
TTGGTGGTGGTGAATGTGGA+GGG 0.593556 1_4:-70177213 Msa0181890:three_prime_UTR
GTGGTGGTGGTGAAGAGTAA+TGG 0.593633 1_4:-70177348 Msa0181890:CDS
CTGTTTGCTGAAATTTGAGA+TGG 0.594879 1_4:-70177067 Msa0181890:three_prime_UTR
GGGTACACCTTAGGAGGTGG+TGG 0.595120 1_4:-70177193 Msa0181890:three_prime_UTR
TTCTTAGGTGGTGAGTACAC+TGG 0.595266 1_4:-70177454 Msa0181890:intron
GGGTACACCTTAGAAGGTGG+TGG 0.595568 1_4:-70177109 Msa0181890:three_prime_UTR
GGAGGGTACACCTTAGGAGG+TGG 0.596763 1_4:-70177196 Msa0181890:three_prime_UTR
TGTGGAGGGTACACCTTAGG+AGG 0.598517 1_4:-70177199 Msa0181890:three_prime_UTR
ACTGGAGGGTACACCTTGGG+TGG 0.601835 1_4:-70177313 Msa0181890:CDS
ACTGGAGGGTACACCTTGGG+TGG 0.601835 1_4:-70177397 Msa0181890:CDS
GGAGGGTACACCTTTGGTGG+TGG 0.604556 1_4:-70177142 Msa0181890:three_prime_UTR
GGAGGGTACACCTTTGGTGG+TGG 0.604556 1_4:-70177226 Msa0181890:three_prime_UTR
GGTGGTGAAGAGTAATGGTA+AGG 0.608369 1_4:-70177259 Msa0181890:three_prime_UTR
GGTGGTGAAGAGTAATGGTA+AGG 0.608369 1_4:-70177343 Msa0181890:CDS
GGTGGTGAAGAGTAATGGTA+AGG 0.608369 1_4:-70177427 Msa0181890:CDS
TACACCTTAGAAGGTGGTGG+AGG 0.609157 1_4:-70177106 Msa0181890:three_prime_UTR
GTGGTGGTGGTGAAGAGTAA+TGG 0.616050 1_4:-70177432 Msa0181890:CDS
GGTAAGGTGGTGAAACTGGA+GGG 0.616234 1_4:-70177159 Msa0181890:three_prime_UTR
GGTAAGGTGGTGAAACTGGA+GGG 0.616234 1_4:-70177243 Msa0181890:three_prime_UTR
GGTAAGGTGGTGAAACTGGA+GGG 0.616234 1_4:-70177327 Msa0181890:CDS
GGTAAGGTGGTGAAACTGGA+GGG 0.616234 1_4:-70177411 Msa0181890:CDS
CAAAATCCCACTATCTAGTG+AGG 0.623839 1_4:+70176956 Msa0181880:five_prime_UTR
GGTGAAGAGTAGTGGTAAGG+TGG 0.632185 1_4:-70177172 Msa0181890:three_prime_UTR
TGTGGAGGGTACACCTTAGG+TGG 0.633211 1_4:-70177283 Msa0181890:exon
GTGAATGGTAAACTGGATGG+GGG 0.635596 1_4:-70177768 Msa0181890:CDS
TGGTAAGGTGGTGAAACTGG+AGG 0.644937 1_4:-70177160 Msa0181890:three_prime_UTR
TGGTAAGGTGGTGAAACTGG+AGG 0.644937 1_4:-70177244 Msa0181890:three_prime_UTR
TGGTAAGGTGGTGAAACTGG+AGG 0.644937 1_4:-70177328 Msa0181890:CDS
TGGTAAGGTGGTGAAACTGG+AGG 0.644937 1_4:-70177412 Msa0181890:CDS
GTGGTGGTGGTGAAGAGTAA+TGG 0.649884 1_4:-70177264 Msa0181890:three_prime_UTR
GGTGAAGAGTAATGGTAAGG+TGG 0.662907 1_4:-70177256 Msa0181890:three_prime_UTR
GGTGAAGAGTAATGGTAAGG+TGG 0.662907 1_4:-70177340 Msa0181890:CDS
GGTGAAGAGTAATGGTAAGG+TGG 0.662907 1_4:-70177424 Msa0181890:CDS
TGAAACTGGAGGGTACACCT+TGG 0.668113 1_4:-70177317 Msa0181890:CDS
TGAAACTGGAGGGTACACCT+TGG 0.668113 1_4:-70177401 Msa0181890:CDS
TTAGGTGGTGAGTACACTGG+TGG 0.669122 1_4:-70177451 Msa0181890:intron
TTGGGTGGTGGTGAATGTGG+AGG 0.669364 1_4:-70177382 Msa0181890:CDS
GGAGGGTACACCTTAGAAGG+TGG 0.699090 1_4:-70177112 Msa0181890:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAAAAAAATGAGGTCTTCAA+TGG + chr1_4:70177791-70177810 Msa0181880:CDS 25.0%
! ACAAGAGAACAAAAAAAATG+AGG + chr1_4:70177801-70177820 Msa0181880:CDS 25.0%
! AAAAAAAATGAGGTCTTCAA+TGG + chr1_4:70177791-70177810 Msa0181880:CDS 25.0%
! ACAAGAGAACAAAAAAAATG+AGG + chr1_4:70177801-70177820 Msa0181880:CDS 25.0%
AATACTTGTATGGCTTCTTT+GGG - chr1_4:70176987-70177006 Msa0181890:three_prime_UTR 30.0%
GAATACTTGTAAGGTTTCTT+TGG - chr1_4:70177229-70177248 Msa0181890:three_prime_UTR 30.0%
AATACTTGTATGGCTTCTTT+GGG - chr1_4:70176987-70177006 Msa0181890:three_prime_UTR 30.0%
GAATACTTGTAAGGTTTCTT+TGG - chr1_4:70177229-70177248 Msa0181890:three_prime_UTR 30.0%
GAATACTTGTATGGCTTCTT+TGG - chr1_4:70176986-70177005 Msa0181890:three_prime_UTR 35.0%
ATACTTGTATGGCTTCTTTG+GGG - chr1_4:70176988-70177007 Msa0181890:three_prime_UTR 35.0%
GAATATTTGTACGGCTTCTT+TGG - chr1_4:70177151-70177170 Msa0181890:three_prime_UTR 35.0%
GAGAATGGTAGTAAGGTTTA+GGG - chr1_4:70177182-70177201 Msa0181890:three_prime_UTR 35.0%
TACTTGTAAGGTTTCTTTGG+TGG - chr1_4:70177232-70177251 Msa0181890:three_prime_UTR 35.0%
TGGTAGTAGTATGGTTTCTT+AGG - chr1_4:70177316-70177335 Msa0181890:CDS 35.0%
TAGTAGTATGGTTTCTTAGG+TGG - chr1_4:70177319-70177338 Msa0181890:CDS 35.0%
TGAATGTGGAGGATATTTCT+TGG - chr1_4:70177414-70177433 Msa0181890:CDS 35.0%
GAATGTGGAGGATATTTCTT+GGG - chr1_4:70177415-70177434 Msa0181890:CDS 35.0%
! CTGTTTGCTGAAATTTGAGA+TGG - chr1_4:70177718-70177737 Msa0181890:CDS 35.0%
! TGCTGAAATTTGAGATGGTA+TGG - chr1_4:70177723-70177742 Msa0181890:CDS 35.0%
AGCTAATAGAAGAGTCAAAG+TGG - chr1_4:70177759-70177778 Msa0181890:CDS 35.0%
GAATACTTGTATGGCTTCTT+TGG - chr1_4:70176986-70177005 Msa0181890:three_prime_UTR 35.0%
ATACTTGTATGGCTTCTTTG+GGG - chr1_4:70176988-70177007 Msa0181890:three_prime_UTR 35.0%
GAATATTTGTACGGCTTCTT+TGG - chr1_4:70177151-70177170 Msa0181890:three_prime_UTR 35.0%
GAGAATGGTAGTAAGGTTTA+GGG - chr1_4:70177182-70177201 Msa0181890:three_prime_UTR 35.0%
TACTTGTAAGGTTTCTTTGG+TGG - chr1_4:70177232-70177251 Msa0181890:three_prime_UTR 35.0%
TGGTAGTAGTATGGTTTCTT+AGG - chr1_4:70177316-70177335 Msa0181890:CDS 35.0%
TAGTAGTATGGTTTCTTAGG+TGG - chr1_4:70177319-70177338 Msa0181890:CDS 35.0%
TGAATGTGGAGGATATTTCT+TGG - chr1_4:70177414-70177433 Msa0181890:CDS 35.0%
GAATGTGGAGGATATTTCTT+GGG - chr1_4:70177415-70177434 Msa0181890:CDS 35.0%
! CTGTTTGCTGAAATTTGAGA+TGG - chr1_4:70177718-70177737 Msa0181890:CDS 35.0%
! TGCTGAAATTTGAGATGGTA+TGG - chr1_4:70177723-70177742 Msa0181890:CDS 35.0%
AGCTAATAGAAGAGTCAAAG+TGG - chr1_4:70177759-70177778 Msa0181890:CDS 35.0%
GGAGGAGATGAATACTTGTA+TGG - chr1_4:70176977-70176996 Msa0181890:three_prime_UTR 40.0%
TACTTGTATGGCTTCTTTGG+GGG - chr1_4:70176989-70177008 Msa0181890:three_prime_UTR 40.0%
AGGTGAATGGTAAACTGGAT+GGG - chr1_4:70177015-70177034 Msa0181890:three_prime_UTR 40.0%
GAGAGTGGTAGTAAGGTTTA+GGG - chr1_4:70177098-70177117 Msa0181890:three_prime_UTR 40.0%
TTAGGGCTTACATAATGCAC+TGG - chr1_4:70177115-70177134 Msa0181890:three_prime_UTR 40.0%
GGAGGAGAGGAATATTTGTA+CGG - chr1_4:70177142-70177161 Msa0181890:three_prime_UTR 40.0%
TATTTGTACGGCTTCTTTGG+TGG - chr1_4:70177154-70177173 Msa0181890:three_prime_UTR 40.0%
GGAGAATGGTAGTAAGGTTT+AGG - chr1_4:70177181-70177200 Msa0181890:three_prime_UTR 40.0%
! TAAGGTTTAGGGTGCACATA+TGG - chr1_4:70177193-70177212 Msa0181890:three_prime_UTR 40.0%
GGAGGAGAAGAATACTTGTA+AGG - chr1_4:70177220-70177239 Msa0181890:three_prime_UTR 40.0%
TTGTAAGGTTTCTTTGGTGG+TGG - chr1_4:70177235-70177254 Msa0181890:three_prime_UTR 40.0%
TAATGGTAAGGTGGTGAAAC+TGG - chr1_4:70177370-70177389 Msa0181890:CDS 40.0%
TAATGGTAAGGTGGTGAAAC+TGG - chr1_4:70177370-70177389 Msa0181890:CDS 40.0%
TAATGGTAAGGTGGTGAAAC+TGG - chr1_4:70177370-70177389 Msa0181890:CDS 40.0%
GGAGGAGATGAATACTTGTA+TGG - chr1_4:70176977-70176996 Msa0181890:three_prime_UTR 40.0%
TACTTGTATGGCTTCTTTGG+GGG - chr1_4:70176989-70177008 Msa0181890:three_prime_UTR 40.0%
AGGTGAATGGTAAACTGGAT+GGG - chr1_4:70177015-70177034 Msa0181890:three_prime_UTR 40.0%
GAGAGTGGTAGTAAGGTTTA+GGG - chr1_4:70177098-70177117 Msa0181890:three_prime_UTR 40.0%
TTAGGGCTTACATAATGCAC+TGG - chr1_4:70177115-70177134 Msa0181890:three_prime_UTR 40.0%
GGAGGAGAGGAATATTTGTA+CGG - chr1_4:70177142-70177161 Msa0181890:three_prime_UTR 40.0%
TATTTGTACGGCTTCTTTGG+TGG - chr1_4:70177154-70177173 Msa0181890:three_prime_UTR 40.0%
GGAGAATGGTAGTAAGGTTT+AGG - chr1_4:70177181-70177200 Msa0181890:three_prime_UTR 40.0%
! TAAGGTTTAGGGTGCACATA+TGG - chr1_4:70177193-70177212 Msa0181890:three_prime_UTR 40.0%
GGAGGAGAAGAATACTTGTA+AGG - chr1_4:70177220-70177239 Msa0181890:three_prime_UTR 40.0%
TTGTAAGGTTTCTTTGGTGG+TGG - chr1_4:70177235-70177254 Msa0181890:three_prime_UTR 40.0%
TAATGGTAAGGTGGTGAAAC+TGG - chr1_4:70177370-70177389 Msa0181890:CDS 40.0%
TAATGGTAAGGTGGTGAAAC+TGG - chr1_4:70177370-70177389 Msa0181890:CDS 40.0%
TAATGGTAAGGTGGTGAAAC+TGG - chr1_4:70177370-70177389 Msa0181890:CDS 40.0%
GAGGTGAATGGTAAACTGGA+TGG - chr1_4:70177014-70177033 Msa0181890:three_prime_UTR 45.0%
GGTGAATGGTAAACTGGATG+GGG - chr1_4:70177016-70177035 Msa0181890:three_prime_UTR 45.0%
GTGAATGGTAAACTGGATGG+GGG - chr1_4:70177017-70177036 Msa0181890:three_prime_UTR 45.0%
GGAGAGTGGTAGTAAGGTTT+AGG - chr1_4:70177097-70177116 Msa0181890:three_prime_UTR 45.0%
! CTTACATAATGCACTGGTGG+AGG - chr1_4:70177121-70177140 Msa0181890:three_prime_UTR 45.0%
!! TAAGGTTTCTTTGGTGGTGG+AGG - chr1_4:70177238-70177257 Msa0181890:three_prime_UTR 45.0%
AGGTGGTGAACTGTAATGGT+AGG - chr1_4:70177258-70177277 Msa0181890:three_prime_UTR 45.0%
GGTGGTGAACTGTAATGGTA+GGG - chr1_4:70177259-70177278 Msa0181890:three_prime_UTR 45.0%
TTCTTAGGTGGTGAGTACAC+TGG - chr1_4:70177331-70177350 Msa0181890:CDS 45.0%
GGTGGTGAAGAGTAATGGTA+AGG - chr1_4:70177358-70177377 Msa0181890:CDS 45.0%
GGTGAAGAGTAATGGTAAGG+TGG - chr1_4:70177361-70177380 Msa0181890:CDS 45.0%
TGTGGAGGATATTTCTTGGG+TGG - chr1_4:70177418-70177437 Msa0181890:CDS 45.0%
GGTGGTGAAGAGTAATGGTA+AGG - chr1_4:70177358-70177377 Msa0181890:CDS 45.0%
GGTGAAGAGTAATGGTAAGG+TGG - chr1_4:70177361-70177380 Msa0181890:CDS 45.0%
GGTGGTGAAGAGTAATGGTA+AGG - chr1_4:70177358-70177377 Msa0181890:CDS 45.0%
GGTGAAGAGTAATGGTAAGG+TGG - chr1_4:70177361-70177380 Msa0181890:CDS 45.0%
TAGTGGTAAGGTGGTGAAAC+TGG - chr1_4:70177622-70177641 Msa0181890:intron 45.0%
TAGAAGAGTCAAAGTGGCAG+AGG - chr1_4:70177765-70177784 Msa0181890:CDS 45.0%
GAGGTGAATGGTAAACTGGA+TGG - chr1_4:70177014-70177033 Msa0181890:three_prime_UTR 45.0%
GGTGAATGGTAAACTGGATG+GGG - chr1_4:70177016-70177035 Msa0181890:three_prime_UTR 45.0%
GTGAATGGTAAACTGGATGG+GGG - chr1_4:70177017-70177036 Msa0181890:three_prime_UTR 45.0%
GGAGAGTGGTAGTAAGGTTT+AGG - chr1_4:70177097-70177116 Msa0181890:three_prime_UTR 45.0%
! CTTACATAATGCACTGGTGG+AGG - chr1_4:70177121-70177140 Msa0181890:three_prime_UTR 45.0%
!! TAAGGTTTCTTTGGTGGTGG+AGG - chr1_4:70177238-70177257 Msa0181890:three_prime_UTR 45.0%
AGGTGGTGAACTGTAATGGT+AGG - chr1_4:70177258-70177277 Msa0181890:three_prime_UTR 45.0%
GGTGGTGAACTGTAATGGTA+GGG - chr1_4:70177259-70177278 Msa0181890:three_prime_UTR 45.0%
TTCTTAGGTGGTGAGTACAC+TGG - chr1_4:70177331-70177350 Msa0181890:CDS 45.0%
GGTGGTGAAGAGTAATGGTA+AGG - chr1_4:70177358-70177377 Msa0181890:CDS 45.0%
GGTGAAGAGTAATGGTAAGG+TGG - chr1_4:70177361-70177380 Msa0181890:CDS 45.0%
TGTGGAGGATATTTCTTGGG+TGG - chr1_4:70177418-70177437 Msa0181890:CDS 45.0%
GGTGGTGAAGAGTAATGGTA+AGG - chr1_4:70177358-70177377 Msa0181890:CDS 45.0%
GGTGAAGAGTAATGGTAAGG+TGG - chr1_4:70177361-70177380 Msa0181890:CDS 45.0%
GGTGGTGAAGAGTAATGGTA+AGG - chr1_4:70177358-70177377 Msa0181890:CDS 45.0%
GGTGAAGAGTAATGGTAAGG+TGG - chr1_4:70177361-70177380 Msa0181890:CDS 45.0%
TAGTGGTAAGGTGGTGAAAC+TGG - chr1_4:70177622-70177641 Msa0181890:intron 45.0%
TAGAAGAGTCAAAGTGGCAG+AGG - chr1_4:70177765-70177784 Msa0181890:CDS 45.0%
! TTGTATGGCTTCTTTGGGGG+AGG - chr1_4:70176992-70177011 Msa0181890:three_prime_UTR 50.0%
GGAGGAGGTGAATGGTAAAC+TGG - chr1_4:70177010-70177029 Msa0181890:three_prime_UTR 50.0%
!!! GTGTGGGTAAGGTTTTGGGT+GGG - chr1_4:70177039-70177058 Msa0181890:three_prime_UTR 50.0%
!!! TGTGGGTAAGGTTTTGGGTG+GGG - chr1_4:70177040-70177059 Msa0181890:three_prime_UTR 50.0%
GGGCTTACATAATGCACTGG+TGG - chr1_4:70177118-70177137 Msa0181890:three_prime_UTR 50.0%
! ACATAATGCACTGGTGGAGG+AGG - chr1_4:70177124-70177143 Msa0181890:three_prime_UTR 50.0%
TTGTACGGCTTCTTTGGTGG+TGG - chr1_4:70177157-70177176 Msa0181890:three_prime_UTR 50.0%
!! TCTTTGGTGGTGGTGGAGAA+TGG - chr1_4:70177167-70177186 Msa0181890:three_prime_UTR 50.0%
!! GGTGGTGGAGAATGGTAGTA+AGG - chr1_4:70177175-70177194 Msa0181890:three_prime_UTR 50.0%
! GGTTTAGGGTGCACATATGG+TGG - chr1_4:70177196-70177215 Msa0181890:three_prime_UTR 50.0%
TTAGGGTGCACATATGGTGG+AGG - chr1_4:70177199-70177218 Msa0181890:three_prime_UTR 50.0%
GTGGAGGTGGTGAACTGTAA+TGG - chr1_4:70177254-70177273 Msa0181890:three_prime_UTR 50.0%
GGTGAACTGTAATGGTAGGG+AGG - chr1_4:70177262-70177281 Msa0181890:three_prime_UTR 50.0%
GAACTGTAATGGTAGGGAGG+AGG - chr1_4:70177265-70177284 Msa0181890:three_prime_UTR 50.0%
GGTGGAGAGTGGTAGTAGTA+TGG - chr1_4:70177307-70177326 Msa0181890:CDS 50.0%
TTAGGTGGTGAGTACACTGG+TGG - chr1_4:70177334-70177353 Msa0181890:CDS 50.0%
!! GTGGTGGTGGTGAAGAGTAA+TGG - chr1_4:70177353-70177372 Msa0181890:CDS 50.0%
TGGTAAGGTGGTGAAACTGG+AGG - chr1_4:70177373-70177392 Msa0181890:CDS 50.0%
GGTAAGGTGGTGAAACTGGA+GGG - chr1_4:70177374-70177393 Msa0181890:CDS 50.0%
! TGAAACTGGAGGGTACACCT+TGG - chr1_4:70177384-70177403 Msa0181890:CDS 50.0%
! GAAACTGGAGGGTACACCTT+GGG - chr1_4:70177385-70177404 Msa0181890:CDS 50.0%
GGAGGATATTTCTTGGGTGG+TGG - chr1_4:70177421-70177440 Msa0181890:CDS 50.0%
! GGATATTTCTTGGGTGGTGG+TGG - chr1_4:70177424-70177443 Msa0181890:CDS 50.0%
!! GTGGTGGTGGTGAAGAGTAA+TGG - chr1_4:70177353-70177372 Msa0181890:CDS 50.0%
TGGTAAGGTGGTGAAACTGG+AGG - chr1_4:70177373-70177392 Msa0181890:CDS 50.0%
GGTAAGGTGGTGAAACTGGA+GGG - chr1_4:70177374-70177393 Msa0181890:CDS 50.0%
! TGAAACTGGAGGGTACACCT+TGG - chr1_4:70177384-70177403 Msa0181890:CDS 50.0%
! GAAACTGGAGGGTACACCTT+GGG - chr1_4:70177385-70177404 Msa0181890:CDS 50.0%
! GAATGTGGAGGGTACACCTT+AGG - chr1_4:70177499-70177518 Msa0181890:intron 50.0%
!! GTGGTGGTGGTGAAGAGTAA+TGG - chr1_4:70177353-70177372 Msa0181890:CDS 50.0%
TGGTAAGGTGGTGAAACTGG+AGG - chr1_4:70177373-70177392 Msa0181890:CDS 50.0%
GGTAAGGTGGTGAAACTGGA+GGG - chr1_4:70177374-70177393 Msa0181890:CDS 50.0%
! GAAACTGGAGGGTACACCTT+TGG - chr1_4:70177385-70177404 Msa0181890:CDS 50.0%
!! ACCTTTGGTGGTGGTGAATG+TGG - chr1_4:70177568-70177587 Msa0181890:intron 50.0%
TCCACATTCACCACCACCAA+AGG + chr1_4:70177572-70177591 Msa0181880:CDS 50.0%
!! TTTGGTGGTGGTGAATGTGG+AGG - chr1_4:70177571-70177590 Msa0181890:intron 50.0%
!! TTGGTGGTGGTGAATGTGGA+GGG - chr1_4:70177572-70177591 Msa0181890:intron 50.0%
! GAATGTGGAGGGTACACCTT+AGG - chr1_4:70177499-70177518 Msa0181890:intron 50.0%
GGTGGTGAAGAGTAGTGGTA+AGG - chr1_4:70177610-70177629 Msa0181890:intron 50.0%
GGTGAAGAGTAGTGGTAAGG+TGG - chr1_4:70177613-70177632 Msa0181890:intron 50.0%
TGGTAAGGTGGTGAAACTGG+AGG - chr1_4:70177373-70177392 Msa0181890:CDS 50.0%
GGTAAGGTGGTGAAACTGGA+GGG - chr1_4:70177374-70177393 Msa0181890:CDS 50.0%
! GAAACTGGAGGGTACACCTT+TGG - chr1_4:70177385-70177404 Msa0181890:CDS 50.0%
! ACTGGAGGGTACACCTTAGA+AGG - chr1_4:70177670-70177689 Msa0181890:intron 50.0%
! TACACCTTAGAAGGTGGTGG+AGG - chr1_4:70177679-70177698 Msa0181890:intron 50.0%
TTCACCTCCACCACCTTCTA+AGG + chr1_4:70177686-70177705 Msa0181880:CDS 50.0%
! TTGTATGGCTTCTTTGGGGG+AGG - chr1_4:70176992-70177011 Msa0181890:three_prime_UTR 50.0%
GGAGGAGGTGAATGGTAAAC+TGG - chr1_4:70177010-70177029 Msa0181890:three_prime_UTR 50.0%
!!! GTGTGGGTAAGGTTTTGGGT+GGG - chr1_4:70177039-70177058 Msa0181890:three_prime_UTR 50.0%
!!! TGTGGGTAAGGTTTTGGGTG+GGG - chr1_4:70177040-70177059 Msa0181890:three_prime_UTR 50.0%
GGGCTTACATAATGCACTGG+TGG - chr1_4:70177118-70177137 Msa0181890:three_prime_UTR 50.0%
! ACATAATGCACTGGTGGAGG+AGG - chr1_4:70177124-70177143 Msa0181890:three_prime_UTR 50.0%
TTGTACGGCTTCTTTGGTGG+TGG - chr1_4:70177157-70177176 Msa0181890:three_prime_UTR 50.0%
!! TCTTTGGTGGTGGTGGAGAA+TGG - chr1_4:70177167-70177186 Msa0181890:three_prime_UTR 50.0%
!! GGTGGTGGAGAATGGTAGTA+AGG - chr1_4:70177175-70177194 Msa0181890:three_prime_UTR 50.0%
! GGTTTAGGGTGCACATATGG+TGG - chr1_4:70177196-70177215 Msa0181890:three_prime_UTR 50.0%
TTAGGGTGCACATATGGTGG+AGG - chr1_4:70177199-70177218 Msa0181890:three_prime_UTR 50.0%
GTGGAGGTGGTGAACTGTAA+TGG - chr1_4:70177254-70177273 Msa0181890:three_prime_UTR 50.0%
GGTGAACTGTAATGGTAGGG+AGG - chr1_4:70177262-70177281 Msa0181890:three_prime_UTR 50.0%
GAACTGTAATGGTAGGGAGG+AGG - chr1_4:70177265-70177284 Msa0181890:three_prime_UTR 50.0%
GGTGGAGAGTGGTAGTAGTA+TGG - chr1_4:70177307-70177326 Msa0181890:CDS 50.0%
TTAGGTGGTGAGTACACTGG+TGG - chr1_4:70177334-70177353 Msa0181890:CDS 50.0%
!! GTGGTGGTGGTGAAGAGTAA+TGG - chr1_4:70177353-70177372 Msa0181890:CDS 50.0%
TGGTAAGGTGGTGAAACTGG+AGG - chr1_4:70177373-70177392 Msa0181890:CDS 50.0%
GGTAAGGTGGTGAAACTGGA+GGG - chr1_4:70177374-70177393 Msa0181890:CDS 50.0%
! TGAAACTGGAGGGTACACCT+TGG - chr1_4:70177384-70177403 Msa0181890:CDS 50.0%
! GAAACTGGAGGGTACACCTT+GGG - chr1_4:70177385-70177404 Msa0181890:CDS 50.0%
GGAGGATATTTCTTGGGTGG+TGG - chr1_4:70177421-70177440 Msa0181890:CDS 50.0%
! GGATATTTCTTGGGTGGTGG+TGG - chr1_4:70177424-70177443 Msa0181890:CDS 50.0%
!! GTGGTGGTGGTGAAGAGTAA+TGG - chr1_4:70177353-70177372 Msa0181890:CDS 50.0%
TGGTAAGGTGGTGAAACTGG+AGG - chr1_4:70177373-70177392 Msa0181890:CDS 50.0%
GGTAAGGTGGTGAAACTGGA+GGG - chr1_4:70177374-70177393 Msa0181890:CDS 50.0%
! TGAAACTGGAGGGTACACCT+TGG - chr1_4:70177384-70177403 Msa0181890:CDS 50.0%
! GAAACTGGAGGGTACACCTT+GGG - chr1_4:70177385-70177404 Msa0181890:CDS 50.0%
! GAATGTGGAGGGTACACCTT+AGG - chr1_4:70177499-70177518 Msa0181890:intron 50.0%
!! GTGGTGGTGGTGAAGAGTAA+TGG - chr1_4:70177353-70177372 Msa0181890:CDS 50.0%
TGGTAAGGTGGTGAAACTGG+AGG - chr1_4:70177373-70177392 Msa0181890:CDS 50.0%
GGTAAGGTGGTGAAACTGGA+GGG - chr1_4:70177374-70177393 Msa0181890:CDS 50.0%
! GAAACTGGAGGGTACACCTT+TGG - chr1_4:70177385-70177404 Msa0181890:CDS 50.0%
!! ACCTTTGGTGGTGGTGAATG+TGG - chr1_4:70177568-70177587 Msa0181890:intron 50.0%
TCCACATTCACCACCACCAA+AGG + chr1_4:70177572-70177591 Msa0181880:CDS 50.0%
!! TTTGGTGGTGGTGAATGTGG+AGG - chr1_4:70177571-70177590 Msa0181890:intron 50.0%
!! TTGGTGGTGGTGAATGTGGA+GGG - chr1_4:70177572-70177591 Msa0181890:intron 50.0%
! GAATGTGGAGGGTACACCTT+AGG - chr1_4:70177499-70177518 Msa0181890:intron 50.0%
GGTGGTGAAGAGTAGTGGTA+AGG - chr1_4:70177610-70177629 Msa0181890:intron 50.0%
GGTGAAGAGTAGTGGTAAGG+TGG - chr1_4:70177613-70177632 Msa0181890:intron 50.0%
TGGTAAGGTGGTGAAACTGG+AGG - chr1_4:70177373-70177392 Msa0181890:CDS 50.0%
GGTAAGGTGGTGAAACTGGA+GGG - chr1_4:70177374-70177393 Msa0181890:CDS 50.0%
! GAAACTGGAGGGTACACCTT+TGG - chr1_4:70177385-70177404 Msa0181890:CDS 50.0%
! ACTGGAGGGTACACCTTAGA+AGG - chr1_4:70177670-70177689 Msa0181890:intron 50.0%
! TACACCTTAGAAGGTGGTGG+AGG - chr1_4:70177679-70177698 Msa0181890:intron 50.0%
TTCACCTCCACCACCTTCTA+AGG + chr1_4:70177686-70177705 Msa0181880:CDS 50.0%
! TATGGCTTCTTTGGGGGAGG+AGG - chr1_4:70176995-70177014 Msa0181890:three_prime_UTR 55.0%
! TCTTTGGGGGAGGAGGTGAA+TGG - chr1_4:70177002-70177021 Msa0181890:three_prime_UTR 55.0%
TGGTAAACTGGATGGGGGTG+TGG - chr1_4:70177022-70177041 Msa0181890:three_prime_UTR 55.0%
! GGTAAACTGGATGGGGGTGT+GGG - chr1_4:70177023-70177042 Msa0181890:three_prime_UTR 55.0%
!! TGGGGGTGTGGGTAAGGTTT+TGG - chr1_4:70177034-70177053 Msa0181890:three_prime_UTR 55.0%
!! GGGGGTGTGGGTAAGGTTTT+GGG - chr1_4:70177035-70177054 Msa0181890:three_prime_UTR 55.0%
!!! GGTGTGGGTAAGGTTTTGGG+TGG - chr1_4:70177038-70177057 Msa0181890:three_prime_UTR 55.0%
!!! GTGGGTAAGGTTTTGGGTGG+GGG - chr1_4:70177041-70177060 Msa0181890:three_prime_UTR 55.0%
!!! GTAAGGTTTTGGGTGGGGGT+GGG - chr1_4:70177045-70177064 Msa0181890:three_prime_UTR 55.0%
!!! TAAGGTTTTGGGTGGGGGTG+GGG - chr1_4:70177046-70177065 Msa0181890:three_prime_UTR 55.0%
! GGATGAGGGTGTGGGTAGTA+TGG - chr1_4:70177067-70177086 Msa0181890:three_prime_UTR 55.0%
! TGAGGGTGTGGGTAGTATGG+AGG - chr1_4:70177070-70177089 Msa0181890:three_prime_UTR 55.0%
GGTGTGGGTAGTATGGAGGT+GGG - chr1_4:70177074-70177093 Msa0181890:three_prime_UTR 55.0%
GTGTGGGTAGTATGGAGGTG+GGG - chr1_4:70177075-70177094 Msa0181890:three_prime_UTR 55.0%
TGTGGGTAGTATGGAGGTGG+GGG - chr1_4:70177076-70177095 Msa0181890:three_prime_UTR 55.0%
!! TACGGCTTCTTTGGTGGTGG+TGG - chr1_4:70177160-70177179 Msa0181890:three_prime_UTR 55.0%
!! GGTTTCTTTGGTGGTGGAGG+TGG - chr1_4:70177241-70177260 Msa0181890:three_prime_UTR 55.0%
CTGTAATGGTAGGGAGGAGG+AGG - chr1_4:70177268-70177287 Msa0181890:exon 55.0%
GGAGGAGGAGGTGAGTAAAC+CGG - chr1_4:70177280-70177299 Msa0181890:exon 55.0%
GAGGAGGTGAGTAAACCGGT+GGG - chr1_4:70177284-70177303 Msa0181890:exon 55.0%
AGGAGGTGAGTAAACCGGTG+GGG - chr1_4:70177285-70177304 Msa0181890:exon 55.0%
! ACCTTGGGTGGTGGTGAATG+TGG - chr1_4:70177400-70177419 Msa0181890:CDS 55.0%
TCCACATTCACCACCACCCA+AGG + chr1_4:70177404-70177423 Msa0181880:CDS 55.0%
! TTGGGTGGTGGTGAATGTGG+AGG - chr1_4:70177403-70177422 Msa0181890:CDS 55.0%
! ACCTTGGGTGGTGGTGAATG+TGG - chr1_4:70177400-70177419 Msa0181890:CDS 55.0%
TCCACATTCACCACCACCCA+AGG + chr1_4:70177404-70177423 Msa0181880:CDS 55.0%
! TTGGGTGGTGGTGAATGTGG+AGG - chr1_4:70177403-70177422 Msa0181890:CDS 55.0%
! TGGGTGGTGGTGAATGTGGA+GGG - chr1_4:70177404-70177423 Msa0181890:CDS 55.0%
! TGTGGAGGGTACACCTTAGG+TGG - chr1_4:70177502-70177521 Msa0181890:intron 55.0%
CTCTTCACCACCACCACCTA+AGG + chr1_4:70177518-70177537 Msa0181880:CDS 55.0%
! ACTGGAGGGTACACCTTTGG+TGG - chr1_4:70177556-70177575 Msa0181890:intron 55.0%
! TGTGGAGGGTACACCTTAGG+AGG - chr1_4:70177502-70177521 Msa0181890:intron 55.0%
CTCTTCACCACCACCTCCTA+AGG + chr1_4:70177602-70177621 Msa0181880:CDS 55.0%
! GAGGTGGTGGTGAAGAGTAG+TGG - chr1_4:70177605-70177624 Msa0181890:intron 55.0%
! ACTGGAGGGTACACCTTTGG+TGG - chr1_4:70177556-70177575 Msa0181890:intron 55.0%
!! ACCTTTGGTGGTGGTGAGAC+TGG - chr1_4:70177652-70177671 Msa0181890:intron 55.0%
TCCAGTCTCACCACCACCAA+AGG + chr1_4:70177656-70177675 Msa0181880:CDS 55.0%
!! TTTGGTGGTGGTGAGACTGG+AGG - chr1_4:70177655-70177674 Msa0181890:intron 55.0%
!! TTGGTGGTGGTGAGACTGGA+GGG - chr1_4:70177656-70177675 Msa0181890:intron 55.0%
! GGAGGGTACACCTTAGAAGG+TGG - chr1_4:70177673-70177692 Msa0181890:intron 55.0%
GGGTACACCTTAGAAGGTGG+TGG - chr1_4:70177676-70177695 Msa0181890:intron 55.0%
! TATGGCTTCTTTGGGGGAGG+AGG - chr1_4:70176995-70177014 Msa0181890:three_prime_UTR 55.0%
! TCTTTGGGGGAGGAGGTGAA+TGG - chr1_4:70177002-70177021 Msa0181890:three_prime_UTR 55.0%
TGGTAAACTGGATGGGGGTG+TGG - chr1_4:70177022-70177041 Msa0181890:three_prime_UTR 55.0%
! GGTAAACTGGATGGGGGTGT+GGG - chr1_4:70177023-70177042 Msa0181890:three_prime_UTR 55.0%
!! TGGGGGTGTGGGTAAGGTTT+TGG - chr1_4:70177034-70177053 Msa0181890:three_prime_UTR 55.0%
!! GGGGGTGTGGGTAAGGTTTT+GGG - chr1_4:70177035-70177054 Msa0181890:three_prime_UTR 55.0%
!!! GGTGTGGGTAAGGTTTTGGG+TGG - chr1_4:70177038-70177057 Msa0181890:three_prime_UTR 55.0%
!!! GTGGGTAAGGTTTTGGGTGG+GGG - chr1_4:70177041-70177060 Msa0181890:three_prime_UTR 55.0%
!!! GTAAGGTTTTGGGTGGGGGT+GGG - chr1_4:70177045-70177064 Msa0181890:three_prime_UTR 55.0%
!!! TAAGGTTTTGGGTGGGGGTG+GGG - chr1_4:70177046-70177065 Msa0181890:three_prime_UTR 55.0%
! GGATGAGGGTGTGGGTAGTA+TGG - chr1_4:70177067-70177086 Msa0181890:three_prime_UTR 55.0%
! TGAGGGTGTGGGTAGTATGG+AGG - chr1_4:70177070-70177089 Msa0181890:three_prime_UTR 55.0%
GGTGTGGGTAGTATGGAGGT+GGG - chr1_4:70177074-70177093 Msa0181890:three_prime_UTR 55.0%
GTGTGGGTAGTATGGAGGTG+GGG - chr1_4:70177075-70177094 Msa0181890:three_prime_UTR 55.0%
TGTGGGTAGTATGGAGGTGG+GGG - chr1_4:70177076-70177095 Msa0181890:three_prime_UTR 55.0%
!! TACGGCTTCTTTGGTGGTGG+TGG - chr1_4:70177160-70177179 Msa0181890:three_prime_UTR 55.0%
!! GGTTTCTTTGGTGGTGGAGG+TGG - chr1_4:70177241-70177260 Msa0181890:three_prime_UTR 55.0%
CTGTAATGGTAGGGAGGAGG+AGG - chr1_4:70177268-70177287 Msa0181890:exon 55.0%
GGAGGAGGAGGTGAGTAAAC+CGG - chr1_4:70177280-70177299 Msa0181890:exon 55.0%
GAGGAGGTGAGTAAACCGGT+GGG - chr1_4:70177284-70177303 Msa0181890:exon 55.0%
AGGAGGTGAGTAAACCGGTG+GGG - chr1_4:70177285-70177304 Msa0181890:exon 55.0%
! ACCTTGGGTGGTGGTGAATG+TGG - chr1_4:70177400-70177419 Msa0181890:CDS 55.0%
TCCACATTCACCACCACCCA+AGG + chr1_4:70177404-70177423 Msa0181880:CDS 55.0%
! TTGGGTGGTGGTGAATGTGG+AGG - chr1_4:70177403-70177422 Msa0181890:CDS 55.0%
! ACCTTGGGTGGTGGTGAATG+TGG - chr1_4:70177400-70177419 Msa0181890:CDS 55.0%
TCCACATTCACCACCACCCA+AGG + chr1_4:70177404-70177423 Msa0181880:CDS 55.0%
! TTGGGTGGTGGTGAATGTGG+AGG - chr1_4:70177403-70177422 Msa0181890:CDS 55.0%
! TGGGTGGTGGTGAATGTGGA+GGG - chr1_4:70177404-70177423 Msa0181890:CDS 55.0%
! TGTGGAGGGTACACCTTAGG+TGG - chr1_4:70177502-70177521 Msa0181890:intron 55.0%
CTCTTCACCACCACCACCTA+AGG + chr1_4:70177518-70177537 Msa0181880:CDS 55.0%
! ACTGGAGGGTACACCTTTGG+TGG - chr1_4:70177556-70177575 Msa0181890:intron 55.0%
! TGTGGAGGGTACACCTTAGG+AGG - chr1_4:70177502-70177521 Msa0181890:intron 55.0%
CTCTTCACCACCACCTCCTA+AGG + chr1_4:70177602-70177621 Msa0181880:CDS 55.0%
! GAGGTGGTGGTGAAGAGTAG+TGG - chr1_4:70177605-70177624 Msa0181890:intron 55.0%
! ACTGGAGGGTACACCTTTGG+TGG - chr1_4:70177556-70177575 Msa0181890:intron 55.0%
!! ACCTTTGGTGGTGGTGAGAC+TGG - chr1_4:70177652-70177671 Msa0181890:intron 55.0%
TCCAGTCTCACCACCACCAA+AGG + chr1_4:70177656-70177675 Msa0181880:CDS 55.0%
!! TTTGGTGGTGGTGAGACTGG+AGG - chr1_4:70177655-70177674 Msa0181890:intron 55.0%
!! TTGGTGGTGGTGAGACTGGA+GGG - chr1_4:70177656-70177675 Msa0181890:intron 55.0%
! GGAGGGTACACCTTAGAAGG+TGG - chr1_4:70177673-70177692 Msa0181890:intron 55.0%
GGGTACACCTTAGAAGGTGG+TGG - chr1_4:70177676-70177695 Msa0181890:intron 55.0%
! ACTGGATGGGGGTGTGGGTA+AGG - chr1_4:70177028-70177047 Msa0181890:three_prime_UTR 60.0%
!!! GGTAAGGTTTTGGGTGGGGG+TGG - chr1_4:70177044-70177063 Msa0181890:three_prime_UTR 60.0%
GGGTGTGGGTAGTATGGAGG+TGG - chr1_4:70177073-70177092 Msa0181890:three_prime_UTR 60.0%
AGTATGGAGGTGGGGGAGAG+TGG - chr1_4:70177083-70177102 Msa0181890:three_prime_UTR 60.0%
GGTGGGGGAGAGTGGTAGTA+AGG - chr1_4:70177091-70177110 Msa0181890:three_prime_UTR 60.0%
! ATGCACTGGTGGAGGAGGAG+AGG - chr1_4:70177129-70177148 Msa0181890:three_prime_UTR 60.0%
! GGGTGCACATATGGTGGAGG+AGG - chr1_4:70177202-70177221 Msa0181890:three_prime_UTR 60.0%
GGAGGAGGTGAGTAAACCGG+TGG - chr1_4:70177283-70177302 Msa0181890:exon 60.0%
GGAGGTGAGTAAACCGGTGG+GGG - chr1_4:70177286-70177305 Msa0181890:exon 60.0%
GGTGGTGAGTACACTGGTGG+TGG - chr1_4:70177337-70177356 Msa0181890:CDS 60.0%
!! GGTGAGTACACTGGTGGTGG+TGG - chr1_4:70177340-70177359 Msa0181890:CDS 60.0%
! ACTGGAGGGTACACCTTGGG+TGG - chr1_4:70177388-70177407 Msa0181890:CDS 60.0%
! ACTGGAGGGTACACCTTGGG+TGG - chr1_4:70177388-70177407 Msa0181890:CDS 60.0%
! GGAGGGTACACCTTAGGTGG+TGG - chr1_4:70177505-70177524 Msa0181890:intron 60.0%
! GGGTACACCTTAGGTGGTGG+TGG - chr1_4:70177508-70177527 Msa0181890:intron 60.0%
! GGAGGGTACACCTTTGGTGG+TGG - chr1_4:70177559-70177578 Msa0181890:intron 60.0%
! GGAGGGTACACCTTAGGAGG+TGG - chr1_4:70177589-70177608 Msa0181890:intron 60.0%
GGGTACACCTTAGGAGGTGG+TGG - chr1_4:70177592-70177611 Msa0181890:intron 60.0%
! GGAGGGTACACCTTTGGTGG+TGG - chr1_4:70177559-70177578 Msa0181890:intron 60.0%
! ACTGGATGGGGGTGTGGGTA+AGG - chr1_4:70177028-70177047 Msa0181890:three_prime_UTR 60.0%
!!! GGTAAGGTTTTGGGTGGGGG+TGG - chr1_4:70177044-70177063 Msa0181890:three_prime_UTR 60.0%
GGGTGTGGGTAGTATGGAGG+TGG - chr1_4:70177073-70177092 Msa0181890:three_prime_UTR 60.0%
AGTATGGAGGTGGGGGAGAG+TGG - chr1_4:70177083-70177102 Msa0181890:three_prime_UTR 60.0%
GGTGGGGGAGAGTGGTAGTA+AGG - chr1_4:70177091-70177110 Msa0181890:three_prime_UTR 60.0%
! ATGCACTGGTGGAGGAGGAG+AGG - chr1_4:70177129-70177148 Msa0181890:three_prime_UTR 60.0%
! GGGTGCACATATGGTGGAGG+AGG - chr1_4:70177202-70177221 Msa0181890:three_prime_UTR 60.0%
GGAGGAGGTGAGTAAACCGG+TGG - chr1_4:70177283-70177302 Msa0181890:exon 60.0%
GGAGGTGAGTAAACCGGTGG+GGG - chr1_4:70177286-70177305 Msa0181890:exon 60.0%
GGTGGTGAGTACACTGGTGG+TGG - chr1_4:70177337-70177356 Msa0181890:CDS 60.0%
!! GGTGAGTACACTGGTGGTGG+TGG - chr1_4:70177340-70177359 Msa0181890:CDS 60.0%
! ACTGGAGGGTACACCTTGGG+TGG - chr1_4:70177388-70177407 Msa0181890:CDS 60.0%
! ACTGGAGGGTACACCTTGGG+TGG - chr1_4:70177388-70177407 Msa0181890:CDS 60.0%
! GGAGGGTACACCTTAGGTGG+TGG - chr1_4:70177505-70177524 Msa0181890:intron 60.0%
! GGGTACACCTTAGGTGGTGG+TGG - chr1_4:70177508-70177527 Msa0181890:intron 60.0%
! GGAGGGTACACCTTTGGTGG+TGG - chr1_4:70177559-70177578 Msa0181890:intron 60.0%
! GGAGGGTACACCTTAGGAGG+TGG - chr1_4:70177589-70177608 Msa0181890:intron 60.0%
GGGTACACCTTAGGAGGTGG+TGG - chr1_4:70177592-70177611 Msa0181890:intron 60.0%
! GGAGGGTACACCTTTGGTGG+TGG - chr1_4:70177559-70177578 Msa0181890:intron 60.0%
TTTGGGTGGGGGTGGGGATG+AGG - chr1_4:70177052-70177071 Msa0181890:three_prime_UTR 65.0%
TTGGGTGGGGGTGGGGATGA+GGG - chr1_4:70177053-70177072 Msa0181890:three_prime_UTR 65.0%
GGTGAGTAAACCGGTGGGGG+TGG - chr1_4:70177289-70177308 Msa0181890:CDS 65.0%
AAACCGGTGGGGGTGGAGAG+TGG - chr1_4:70177296-70177315 Msa0181890:CDS 65.0%
CTACCACTCTCCACCCCCAC+CGG + chr1_4:70177302-70177321 Msa0181880:CDS 65.0%
! GGAGGGTACACCTTGGGTGG+TGG - chr1_4:70177391-70177410 Msa0181890:CDS 65.0%
! GGAGGGTACACCTTGGGTGG+TGG - chr1_4:70177391-70177410 Msa0181890:CDS 65.0%
TTTGGGTGGGGGTGGGGATG+AGG - chr1_4:70177052-70177071 Msa0181890:three_prime_UTR 65.0%
TTGGGTGGGGGTGGGGATGA+GGG - chr1_4:70177053-70177072 Msa0181890:three_prime_UTR 65.0%
GGTGAGTAAACCGGTGGGGG+TGG - chr1_4:70177289-70177308 Msa0181890:CDS 65.0%
AAACCGGTGGGGGTGGAGAG+TGG - chr1_4:70177296-70177315 Msa0181890:CDS 65.0%
CTACCACTCTCCACCCCCAC+CGG + chr1_4:70177302-70177321 Msa0181880:CDS 65.0%
! GGAGGGTACACCTTGGGTGG+TGG - chr1_4:70177391-70177410 Msa0181890:CDS 65.0%
! GGAGGGTACACCTTGGGTGG+TGG - chr1_4:70177391-70177410 Msa0181890:CDS 65.0%
TGGGGGTGGGGATGAGGGTG+TGG - chr1_4:70177058-70177077 Msa0181890:three_prime_UTR 70.0%
! GGGGGTGGGGATGAGGGTGT+GGG - chr1_4:70177059-70177078 Msa0181890:three_prime_UTR 70.0%
TGGGGGTGGGGATGAGGGTG+TGG - chr1_4:70177058-70177077 Msa0181890:three_prime_UTR 70.0%
! GGGGGTGGGGATGAGGGTGT+GGG - chr1_4:70177059-70177078 Msa0181890:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 70176969 70177838 70176969 ID=Msa0181890;Name=Msa0181890
chr1_4 mRNA 70176969 70177838 70176969 ID=Msa0181890-mRNA-1;Parent=Msa0181890;Name=Msa0181890-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0.5|0.5|0|0|2|318|108
chr1_4 exon 70176969 70177469 70176969 ID=Msa0181890-mRNA-1:exon:23431;Parent=Msa0181890-mRNA-1
chr1_4 exon 70177695 70177838 70177695 ID=Msa0181890-mRNA-1:exon:23430;Parent=Msa0181890-mRNA-1
chr1_4 CDS 70177695 70177838 70177695 ID=Msa0181890-mRNA-1:cds;Parent=Msa0181890-mRNA-1
chr1_4 CDS 70177287 70177469 70177287 ID=Msa0181890-mRNA-1:cds;Parent=Msa0181890-mRNA-1
chr1_4 three_prime_UTR 70176969 70177286 70176969 ID=Msa0181890-mRNA-1:three_prime_utr;Parent=Msa0181890-mRNA-1
Gene Sequence

>Msa0181890

ATGGAGGTGGAGGAGATGAATACTTGTATGGCTTCTTTGGGGGAGGAGGTGAATGGTAAACTGGATGGGGGTGTGGGTAAGGTTTTGGGTGGGGGTGGGGATGAGGGTGTGGGTAGTATGGAGGTGGGGGAGAGTGGTAGTAAGGTGGTGAGTACACTGGTGGTGGTGGTGAAGAGTAATGGTAAGGTGGTGAAACTGGAGGGTACACCTTGGGTGGTGGTGAATGTGGAGGATATTTCTTGGGTGGTGGTGGTGAAGAGTAATGGTAAGGTGGTGAAACTGGAGGGTACACCTTGGGTGGTGGTGAATGTGGAGGGTACACCTTAG
Protein sequence

>Msa0181890

MEVEEMNTCMASLGEEVNGKLDGGVGKVLGGGGDEGVGSMEVGESGSKVVSTLVVVVKSNGKVVKLEGTPWVVVNVEDISWVVVVKSNGKVVKLEGTPWVVVNVEGTP*