Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0687370 | ACJ85787.1 | 98.712 | 233 | 3 | 0 | 1 | 233 | 1 | 233 | 2.97e-167 | 473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0687370 | sp|P93472|DIM_PEA | 94.850 | 233 | 12 | 0 | 1 | 233 | 1 | 233 | 5.34e-160 | 458 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0687370 | B7FM04 | 98.712 | 233 | 3 | 0 | 1 | 233 | 1 | 233 | 1.42e-167 | 473 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0687370 | 0.851383 | 9.197577e-61 | -8.615850e-47 |
| Msa0013410 | Msa0687370 | 0.817656 | 2.945140e-52 | -8.615850e-47 |
| Msa0019830 | Msa0687370 | 0.809450 | 1.881375e-50 | -8.615850e-47 |
| Msa0027800 | Msa0687370 | 0.802636 | 5.106716e-49 | -8.615850e-47 |
| Msa0032130 | Msa0687370 | 0.813198 | 2.890428e-51 | -8.615850e-47 |
| Msa0032390 | Msa0687370 | 0.812058 | 5.130364e-51 | -8.615850e-47 |
| Msa0038530 | Msa0687370 | 0.803215 | 3.877328e-49 | -8.615850e-47 |
| Msa0045620 | Msa0687370 | 0.855662 | 5.426131e-62 | -8.615850e-47 |
| Msa0046840 | Msa0687370 | 0.806934 | 6.462788e-50 | -8.615850e-47 |
| Msa0050530 | Msa0687370 | 0.865952 | 4.065390e-65 | -8.615850e-47 |
| Msa0063190 | Msa0687370 | 0.823850 | 1.109306e-53 | -8.615850e-47 |
| Msa0080370 | Msa0687370 | 0.813365 | 2.656085e-51 | -8.615850e-47 |
| Msa0080440 | Msa0687370 | 0.816002 | 6.920777e-52 | -8.615850e-47 |
| Msa0084990 | Msa0687370 | 0.822153 | 2.758034e-53 | -8.615850e-47 |
| Msa0094180 | Msa0687370 | 0.815112 | 1.092141e-51 | -8.615850e-47 |
| Msa0100600 | Msa0687370 | 0.842364 | 2.704874e-58 | -8.615850e-47 |
| Msa0100890 | Msa0687370 | 0.846726 | 1.811677e-59 | -8.615850e-47 |
| Msa0104570 | Msa0687370 | 0.806400 | 8.378770e-50 | -8.615850e-47 |
| Msa0109730 | Msa0687370 | 0.807962 | 3.912101e-50 | -8.615850e-47 |
| Msa0623310 | Msa0687370 | 0.843270 | 1.553791e-58 | -8.615850e-47 |
| Msa0626980 | Msa0687370 | 0.841054 | 5.996674e-58 | -8.615850e-47 |
| Msa0627360 | Msa0687370 | 0.845457 | 4.013431e-59 | -8.615850e-47 |
| Msa0630440 | Msa0687370 | 0.801196 | 1.009213e-48 | -8.615850e-47 |
| Msa0647440 | Msa0687370 | 0.810704 | 1.010012e-50 | -8.615850e-47 |
| Msa0657210 | Msa0687370 | 0.803870 | 2.835292e-49 | -8.615850e-47 |
| Msa0660090 | Msa0687370 | 0.816970 | 4.200881e-52 | -8.615850e-47 |
| Msa0663290 | Msa0687370 | 0.840322 | 9.321363e-58 | -8.615850e-47 |
| Msa0664070 | Msa0687370 | 0.836941 | 6.966735e-57 | -8.615850e-47 |
| Msa0672420 | Msa0687370 | 0.828519 | 8.595935e-55 | -8.615850e-47 |
| Msa0673940 | Msa0687370 | 0.854853 | 9.335442e-62 | -8.615850e-47 |
| Msa0687370 | Msa0689660 | 0.818707 | 1.702835e-52 | -8.615850e-47 |
| Msa0687370 | Msa0689830 | 0.827901 | 1.210792e-54 | -8.615850e-47 |
| Msa0687370 | Msa0701250 | 0.817107 | 3.915295e-52 | -8.615850e-47 |
| Msa0687370 | Msa0701890 | 0.811094 | 8.313425e-51 | -8.615850e-47 |
| Msa0687370 | Msa0707260 | 0.805352 | 1.391371e-49 | -8.615850e-47 |
| Msa0687370 | Msa0708020 | 0.812648 | 3.814508e-51 | -8.615850e-47 |
| Msa0687370 | Msa0726520 | 0.806397 | 8.389893e-50 | -8.615850e-47 |
| Msa0687370 | Msa0732970 | 0.804336 | 2.268722e-49 | -8.615850e-47 |
| Msa0687370 | Msa0751720 | 0.847787 | 9.271195e-60 | -8.615850e-47 |
| Msa0687370 | Msa0764770 | 0.851288 | 9.788012e-61 | -8.615850e-47 |
| Msa0687370 | Msa0799170 | 0.805820 | 1.109678e-49 | -8.615850e-47 |
| Msa0687370 | Msa0822740 | 0.800982 | 1.116249e-48 | -8.615850e-47 |
| Msa0687370 | Msa0831820 | 0.819006 | 1.456778e-52 | -8.615850e-47 |
| Msa0687370 | Msa0837610 | 0.807119 | 5.906408e-50 | -8.615850e-47 |
| Msa0687370 | Msa0837680 | 0.805126 | 1.551310e-49 | -8.615850e-47 |
| Msa0687370 | Msa0844400 | 0.808167 | 3.537823e-50 | -8.615850e-47 |
| Msa0687370 | Msa0846900 | 0.818414 | 1.984819e-52 | -8.615850e-47 |
| Msa0687370 | Msa0876630 | 0.812878 | 3.396300e-51 | -8.615850e-47 |
| Msa0687370 | Msa0900090 | 0.810431 | 1.156882e-50 | -8.615850e-47 |
| Msa0687370 | Msa0926310 | 0.823554 | 1.301321e-53 | -8.615850e-47 |
| Msa0687370 | Msa0926760 | 0.829300 | 5.559909e-55 | -8.615850e-47 |
| Msa0687370 | Msa0929900 | 0.835286 | 1.833391e-56 | -8.615850e-47 |
| Msa0687370 | Msa0999950 | 0.803596 | 3.233408e-49 | -8.615850e-47 |
| Msa0687370 | Msa1000780 | 0.822679 | 2.082520e-53 | -8.615850e-47 |
| Msa0687370 | Msa1008850 | 0.868985 | 4.344280e-66 | -8.615850e-47 |
| Msa0687370 | Msa1019180 | 0.805903 | 1.066023e-49 | -8.615850e-47 |
| Msa0687370 | Msa1019200 | 0.813556 | 2.410775e-51 | -8.615850e-47 |
| Msa0687370 | Msa1021560 | 0.877717 | 5.022355e-69 | -8.615850e-47 |
| Msa0687370 | Msa1025200 | 0.807146 | 5.829541e-50 | -8.615850e-47 |
| Msa0687370 | Msa1025220 | 0.802679 | 5.003537e-49 | -8.615850e-47 |
| Msa0687370 | Msa1026710 | 0.816616 | 5.046241e-52 | -8.615850e-47 |
| Msa0687370 | Msa1050260 | 0.878021 | 3.931990e-69 | -8.615850e-47 |
| Msa0687370 | Msa1060300 | 0.866612 | 2.509800e-65 | -8.615850e-47 |
| Msa0687370 | Msa1078080 | 0.814707 | 1.342932e-51 | -8.615850e-47 |
| Msa0687370 | Msa1085680 | 0.863804 | 1.916727e-64 | -8.615850e-47 |
| Msa0687370 | Msa1088260 | 0.818336 | 2.067377e-52 | -8.615850e-47 |
| Msa0687370 | Msa1098630 | 0.812033 | 5.195536e-51 | -8.615850e-47 |
| Msa0687370 | Msa1105540 | 0.873815 | 1.097125e-67 | -8.615850e-47 |
| Msa0687370 | Msa1105580 | 0.876345 | 1.503875e-68 | -8.615850e-47 |
| Msa0687370 | Msa1106220 | 0.807999 | 3.841096e-50 | -8.615850e-47 |
| Msa0687370 | Msa1124210 | 0.811866 | 5.651691e-51 | -8.615850e-47 |
| Msa0687370 | Msa1130770 | 0.804625 | 1.974759e-49 | -8.615850e-47 |
| Msa0687370 | Msa1138800 | 0.840616 | 7.810036e-58 | -8.615850e-47 |
| Msa0687370 | Msa1144990 | 0.833227 | 6.018379e-56 | -8.615850e-47 |
| Msa0687370 | Msa1148930 | 0.863466 | 2.440958e-64 | -8.615850e-47 |
| Msa0687370 | Msa1160930 | 0.805675 | 1.190564e-49 | -8.615850e-47 |
| Msa0687370 | Msa1166820 | 0.801561 | 8.495300e-49 | -8.615850e-47 |
| Msa0687370 | Msa1180840 | 0.842623 | 2.309621e-58 | -8.615850e-47 |
| Msa0687370 | Msa1188340 | 0.812563 | 3.980913e-51 | -8.615850e-47 |
| Msa0687370 | Msa1188930 | 0.826850 | 2.163431e-54 | -8.615850e-47 |
| Msa0687370 | Msa1206040 | 0.812358 | 4.413224e-51 | -8.615850e-47 |
| Msa0687370 | Msa1220720 | 0.811235 | 7.749273e-51 | -8.615850e-47 |
| Msa0687370 | Msa1226370 | 0.811510 | 6.754494e-51 | -8.615850e-47 |
| Msa0687370 | Msa1227760 | 0.807239 | 5.570619e-50 | -8.615850e-47 |
| Msa0687370 | Msa1231490 | 0.822916 | 1.833267e-53 | -8.615850e-47 |
| Msa0687370 | Msa1236150 | 0.854560 | 1.134467e-61 | -8.615850e-47 |
| Msa0687370 | Msa1240940 | 0.818883 | 1.553289e-52 | -8.615850e-47 |
| Msa0687370 | Msa1255710 | 0.812985 | 3.217699e-51 | -8.615850e-47 |
| Msa0687370 | Msa1265570 | 0.815992 | 6.956508e-52 | -8.615850e-47 |
| Msa0687370 | Msa1267930 | 0.816941 | 4.264578e-52 | -8.615850e-47 |
| Msa0687370 | Msa1278030 | 0.843850 | 1.087244e-58 | -8.615850e-47 |
| Msa0687370 | Msa1282300 | 0.836271 | 1.031772e-56 | -8.615850e-47 |
| Msa0687370 | Msa1293840 | 0.806920 | 6.506535e-50 | -8.615850e-47 |
| Msa0687370 | Msa1294790 | 0.809174 | 2.155408e-50 | -8.615850e-47 |
| Msa0687370 | Msa1296860 | 0.825351 | 4.914075e-54 | -8.615850e-47 |
| Msa0687370 | Msa1297070 | 0.803641 | 3.164491e-49 | -8.615850e-47 |
| Msa0687370 | Msa1328280 | 0.806390 | 8.419214e-50 | -8.615850e-47 |
| Msa0687370 | Msa1328870 | 0.811193 | 7.913307e-51 | -8.615850e-47 |
| Msa0687370 | Msa1334670 | 0.818195 | 2.224794e-52 | -8.615850e-47 |
| Msa0687370 | Msa1342760 | 0.811940 | 5.445204e-51 | -8.615850e-47 |
| Msa0687370 | Msa1356450 | 0.801307 | 9.578559e-49 | -8.615850e-47 |
| Msa0687370 | Msa1362590 | 0.829133 | 6.105662e-55 | -8.615850e-47 |
| Msa0687370 | Msa1363010 | 0.819880 | 9.205698e-53 | -8.615850e-47 |
| Msa0687370 | Msa1365230 | 0.815136 | 1.078808e-51 | -8.615850e-47 |
| Msa0687370 | Msa1368170 | 0.913770 | 4.184231e-84 | -8.615850e-47 |
| Msa0687370 | Msa1368990 | 0.835584 | 1.541059e-56 | -8.615850e-47 |
| Msa0687370 | Msa1371800 | 0.846908 | 1.615652e-59 | -8.615850e-47 |
| Msa0687370 | Msa1372030 | 0.815505 | 8.933812e-52 | -8.615850e-47 |
| Msa0687370 | Msa1376310 | 0.848400 | 6.280344e-60 | -8.615850e-47 |
| Msa0687370 | Msa1385570 | 0.949694 | 7.576951e-108 | -8.615850e-47 |
| Msa0687370 | Msa1389310 | 0.835946 | 1.248102e-56 | -8.615850e-47 |
| Msa0687370 | Msa1389820 | 0.818293 | 2.114608e-52 | -8.615850e-47 |
| Msa0687370 | Msa1393850 | 0.866122 | 3.590444e-65 | -8.615850e-47 |
| Msa0687370 | Msa1398490 | 0.815973 | 7.024230e-52 | -8.615850e-47 |
| Msa0687370 | Msa1400780 | 0.806311 | 8.750232e-50 | -8.615850e-47 |
| Msa0687370 | Msa1419900 | 0.804075 | 2.570676e-49 | -8.615850e-47 |
| Msa0687370 | Msa1420830 | 0.838652 | 2.531865e-57 | -8.615850e-47 |
| Msa0687370 | Msa1428000 | 0.802832 | 4.652543e-49 | -8.615850e-47 |
| Msa0687370 | Msa1435110 | 0.802639 | 5.098752e-49 | -8.615850e-47 |
| Msa0687370 | Msa1438510 | 0.805167 | 1.521004e-49 | -8.615850e-47 |
| Msa0687370 | Msa1439920 | 0.815896 | 7.308103e-52 | -8.615850e-47 |
| Msa0687370 | Msa1447900 | 0.827315 | 1.674807e-54 | -8.615850e-47 |
| Msa0687370 | Msa1452950 | 0.803344 | 3.645871e-49 | -8.615850e-47 |
| Msa0687370 | Msa1454410 | 0.820870 | 5.457902e-53 | -8.615850e-47 |
| Msa0687370 | Msa1460970 | 0.837423 | 5.244050e-57 | -8.615850e-47 |
| Msa0131810 | Msa0687370 | 0.804707 | 1.898018e-49 | -8.615850e-47 |
| Msa0132700 | Msa0687370 | 0.809458 | 1.873538e-50 | -8.615850e-47 |
| Msa0136690 | Msa0687370 | 0.809335 | 1.991371e-50 | -8.615850e-47 |
| Msa0147680 | Msa0687370 | 0.804457 | 2.140907e-49 | -8.615850e-47 |
| Msa0158760 | Msa0687370 | 0.806529 | 7.869928e-50 | -8.615850e-47 |
| Msa0168380 | Msa0687370 | 0.806116 | 9.616248e-50 | -8.615850e-47 |
| Msa0173250 | Msa0687370 | 0.805156 | 1.529591e-49 | -8.615850e-47 |
| Msa0177830 | Msa0687370 | 0.808973 | 2.380100e-50 | -8.615850e-47 |
| Msa0177970 | Msa0687370 | 0.804423 | 2.176073e-49 | -8.615850e-47 |
| Msa0181890 | Msa0687370 | 0.803468 | 3.436114e-49 | -8.615850e-47 |
| Msa0185690 | Msa0687370 | 0.815336 | 9.742547e-52 | -8.615850e-47 |
| Msa0186180 | Msa0687370 | 0.800377 | 1.482975e-48 | -8.615850e-47 |
| Msa0204970 | Msa0687370 | 0.832264 | 1.043618e-55 | -8.615850e-47 |
| Msa0206370 | Msa0687370 | 0.828116 | 1.075275e-54 | -8.615850e-47 |
| Msa0225800 | Msa0687370 | 0.815021 | 1.144497e-51 | -8.615850e-47 |
| Msa0235080 | Msa0687370 | 0.808549 | 2.932631e-50 | -8.615850e-47 |
| Msa0372100 | Msa0687370 | 0.812644 | 3.821041e-51 | -8.615850e-47 |
| Msa0382220 | Msa0687370 | 0.809192 | 2.136289e-50 | -8.615850e-47 |
| Msa0383940 | Msa0687370 | 0.800511 | 1.392790e-48 | -8.615850e-47 |
| Msa0387890 | Msa0687370 | 0.822069 | 2.885651e-53 | -8.615850e-47 |
| Msa0388250 | Msa0687370 | 0.822233 | 2.643593e-53 | -8.615850e-47 |
| Msa0401060 | Msa0687370 | 0.836768 | 7.711960e-57 | -8.615850e-47 |
| Msa0413170 | Msa0687370 | 0.821309 | 4.323894e-53 | -8.615850e-47 |
| Msa0416210 | Msa0687370 | 0.808458 | 3.066256e-50 | -8.615850e-47 |
| Msa0420430 | Msa0687370 | 0.812760 | 3.605012e-51 | -8.615850e-47 |
| Msa0421290 | Msa0687370 | 0.815027 | 1.140645e-51 | -8.615850e-47 |
| Msa0421750 | Msa0687370 | 0.806144 | 9.486538e-50 | -8.615850e-47 |
| Msa0422820 | Msa0687370 | 0.818727 | 1.685483e-52 | -8.615850e-47 |
| Msa0422900 | Msa0687370 | 0.806851 | 6.728138e-50 | -8.615850e-47 |
| Msa0429970 | Msa0687370 | 0.816450 | 5.495105e-52 | -8.615850e-47 |
| Msa0432200 | Msa0687370 | 0.828402 | 9.169851e-55 | -8.615850e-47 |
| Msa0432690 | Msa0687370 | 0.812192 | 4.796892e-51 | -8.615850e-47 |
| Msa0433630 | Msa0687370 | 0.831172 | 1.940699e-55 | -8.615850e-47 |
| Msa0447870 | Msa0687370 | 0.800739 | 1.251398e-48 | -8.615850e-47 |
| Msa0458100 | Msa0687370 | 0.814792 | 1.286311e-51 | -8.615850e-47 |
| Msa0466520 | Msa0687370 | 0.803375 | 3.592404e-49 | -8.615850e-47 |
| Msa0467250 | Msa0687370 | 0.832161 | 1.106974e-55 | -8.615850e-47 |
| Msa0469430 | Msa0687370 | 0.806695 | 7.260939e-50 | -8.615850e-47 |
| Msa0476540 | Msa0687370 | 0.800682 | 1.285172e-48 | -8.615850e-47 |
| Msa0477480 | Msa0687370 | 0.826443 | 2.705861e-54 | -8.615850e-47 |
| Msa0238880 | Msa0687370 | 0.807814 | 4.204885e-50 | -8.615850e-47 |
| Msa0240540 | Msa0687370 | 0.800033 | 1.742136e-48 | -8.615850e-47 |
| Msa0241040 | Msa0687370 | 0.863981 | 1.688009e-64 | -8.615850e-47 |
| Msa0249870 | Msa0687370 | 0.825466 | 4.615859e-54 | -8.615850e-47 |
| Msa0260570 | Msa0687370 | 0.822063 | 2.893915e-53 | -8.615850e-47 |
| Msa0260630 | Msa0687370 | 0.801673 | 8.057314e-49 | -8.615850e-47 |
| Msa0260980 | Msa0687370 | 0.826772 | 2.257482e-54 | -8.615850e-47 |
| Msa0276730 | Msa0687370 | 0.858215 | 9.596927e-63 | -8.615850e-47 |
| Msa0278840 | Msa0687370 | 0.849263 | 3.617324e-60 | -8.615850e-47 |
| Msa0281540 | Msa0687370 | 0.818315 | 2.090168e-52 | -8.615850e-47 |
| Msa0316630 | Msa0687370 | 0.856290 | 3.556265e-62 | -8.615850e-47 |
| Msa0318620 | Msa0687370 | 0.823536 | 1.313740e-53 | -8.615850e-47 |
| Msa0320580 | Msa0687370 | 0.807443 | 5.042048e-50 | -8.615850e-47 |
| Msa0326290 | Msa0687370 | 0.832363 | 9.868854e-56 | -8.615850e-47 |
| Msa0334380 | Msa0687370 | 0.824191 | 9.225455e-54 | -8.615850e-47 |
| Msa0336430 | Msa0687370 | 0.822980 | 1.771660e-53 | -8.615850e-47 |
| Msa0336460 | Msa0687370 | 0.815988 | 6.970934e-52 | -8.615850e-47 |
| Msa0336520 | Msa0687370 | 0.839726 | 1.333823e-57 | -8.615850e-47 |
| Msa0344110 | Msa0687370 | 0.813998 | 1.926487e-51 | -8.615850e-47 |
| Msa0356640 | Msa0687370 | 0.804807 | 1.809324e-49 | -8.615850e-47 |
| Msa0495620 | Msa0687370 | 0.805610 | 1.228224e-49 | -8.615850e-47 |
| Msa0514020 | Msa0687370 | 0.803998 | 2.667770e-49 | -8.615850e-47 |
| Msa0515110 | Msa0687370 | 0.852184 | 5.453096e-61 | -8.615850e-47 |
| Msa0520530 | Msa0687370 | 0.804773 | 1.839184e-49 | -8.615850e-47 |
| Msa0521060 | Msa0687370 | 0.829255 | 5.702081e-55 | -8.615850e-47 |
| Msa0521510 | Msa0687370 | 0.831497 | 1.614273e-55 | -8.615850e-47 |
| Msa0521530 | Msa0687370 | 0.844442 | 7.541342e-59 | -8.615850e-47 |
| Msa0527850 | Msa0687370 | 0.820510 | 6.601640e-53 | -8.615850e-47 |
| Msa0530660 | Msa0687370 | 0.848025 | 7.971170e-60 | -8.615850e-47 |
| Msa0532160 | Msa0687370 | 0.804041 | 2.612898e-49 | -8.615850e-47 |
| Msa0536410 | Msa0687370 | 0.820614 | 6.248776e-53 | -8.615850e-47 |
| Msa0541740 | Msa0687370 | 0.817505 | 3.184850e-52 | -8.615850e-47 |
| Msa0552570 | Msa0687370 | 0.884184 | 2.381244e-71 | -8.615850e-47 |
| Msa0566460 | Msa0687370 | 0.806190 | 9.275510e-50 | -8.615850e-47 |
| Msa0571350 | Msa0687370 | 0.810291 | 1.240296e-50 | -8.615850e-47 |
| Msa0572830 | Msa0687370 | 0.833594 | 4.875474e-56 | -8.615850e-47 |
| Msa0574660 | Msa0687370 | 0.847880 | 8.741703e-60 | -8.615850e-47 |
| Msa0575950 | Msa0687370 | 0.801640 | 8.185489e-49 | -8.615850e-47 |
| Msa0576330 | Msa0687370 | 0.860460 | 2.034343e-63 | -8.615850e-47 |
| Msa0582460 | Msa0687370 | 0.822084 | 2.861740e-53 | -8.615850e-47 |
| Msa0586200 | Msa0687370 | 0.813314 | 2.724857e-51 | -8.615850e-47 |
| Msa0587180 | Msa0687370 | 0.857835 | 1.244946e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0687370 | MtrunA17_Chr4g0037811 | 99.296 | 142 | 1 | 0 | 1 | 142 | 1 | 142 | 4.11e-98 | 293 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0687370 | AT3G19820.2 | 80.169 | 237 | 46 | 1 | 1 | 236 | 1 | 237 | 2.19e-135 | 393 |
| Msa0687370 | AT3G19820.1 | 80.169 | 237 | 46 | 1 | 1 | 236 | 1 | 237 | 2.19e-135 | 393 |
| Msa0687370 | AT3G19820.3 | 80.169 | 237 | 46 | 1 | 1 | 236 | 1 | 237 | 2.19e-135 | 393 |
Find 78 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTGATCTTTCTGCTTTC+AGG | 0.122233 | 4_4:+52187855 | Msa0687370:CDS |
| ACCCAAATCTTCTTCCTCTT+AGG | 0.291716 | 4_4:-52187560 | None:intergenic |
| ACCGTTGGTGGCCTCATAAA+TGG | 0.294869 | 4_4:+52188007 | Msa0687370:CDS |
| GATCAAGCTTATACCCATTA+AGG | 0.299055 | 4_4:+52188207 | Msa0687370:CDS |
| TTCCTTCTGCCGCGTCTTGA+AGG | 0.306504 | 4_4:-52187693 | None:intergenic |
| GCCCTAAGAGGAAGAAGATT+TGG | 0.321771 | 4_4:+52187558 | Msa0687370:CDS |
| AAAATAAAGTGTGAAGGAAA+TGG | 0.340562 | 4_4:-52187633 | None:intergenic |
| GAAGGAAGTTCCCACAAATA+TGG | 0.349276 | 4_4:+52188040 | Msa0687370:CDS |
| AAAGCCAGATCCTGGAGTTT+AGG | 0.353808 | 4_4:+52190636 | Msa0687370:CDS |
| GGTGGCCTCATAAATGGTTA+TGG | 0.368242 | 4_4:+52188013 | Msa0687370:CDS |
| TTACGCTATTCCGTGGTCTC+AGG | 0.376933 | 4_4:+52188156 | Msa0687370:CDS |
| CCCTAAGAGGAAGAAGATTT+GGG | 0.379452 | 4_4:+52187559 | Msa0687370:CDS |
| CCGTGGTCTCAGGGAACACT+TGG | 0.380984 | 4_4:+52188166 | Msa0687370:CDS |
| TGTGGCCTTCGAAATTGTTC+TGG | 0.388234 | 4_4:+52188081 | Msa0687370:CDS |
| TGAGAAATGTTGACTATAAG+AGG | 0.392610 | 4_4:+52187819 | Msa0687370:CDS |
| CCCAAATCTTCTTCCTCTTA+GGG | 0.403561 | 4_4:-52187559 | None:intergenic |
| ACTTGCTGTGGTTGCTGAGC+TGG | 0.410845 | 4_4:+52187976 | Msa0687370:CDS |
| ATAAATGGTTATGGGATAGA+AGG | 0.411534 | 4_4:+52188022 | Msa0687370:CDS |
| TCAACATGGGGCAGATTACC+AGG | 0.420055 | 4_4:+52187930 | Msa0687370:CDS |
| CTATCCCATAACCATTTATG+AGG | 0.428256 | 4_4:-52188018 | None:intergenic |
| AAATAAAGTGTGAAGGAAAT+GGG | 0.442624 | 4_4:-52187632 | None:intergenic |
| TTCGAAATTGTTCTGGCAGA+TGG | 0.443717 | 4_4:+52188088 | Msa0687370:CDS |
| ACAGCAAGTGCAAGATTCAT+AGG | 0.446972 | 4_4:-52187962 | None:intergenic |
| GCAGACAAGGCCATCCTTTG+AGG | 0.452680 | 4_4:-52187765 | None:intergenic |
| GTGGCCTCATAAATGGTTAT+GGG | 0.459653 | 4_4:+52188014 | Msa0687370:CDS |
| CGTAAGCCGTGGATCGCTGT+TGG | 0.463167 | 4_4:+52187794 | Msa0687370:CDS |
| CGGAAAAGAGGCCATATTTG+TGG | 0.470653 | 4_4:-52188051 | None:intergenic |
| GTAAGCCGTGGATCGCTGTT+GGG | 0.474322 | 4_4:+52187795 | Msa0687370:CDS |
| TATTCCTAAACTCCAGGATC+TGG | 0.478845 | 4_4:-52190640 | Msa0687380:three_prime_UTR |
| TCTTCTTCCTCTTAGGGCGC+AGG | 0.481487 | 4_4:-52187553 | None:intergenic |
| TTTGCAGTAAAGCCAGATCC+TGG | 0.485979 | 4_4:+52190628 | Msa0687370:intron |
| CCAAGTGTTCCCTGAGACCA+CGG | 0.493362 | 4_4:-52188166 | None:intergenic |
| AGGCTCCCCTGCGCCCTAAG+AGG | 0.499822 | 4_4:+52187546 | Msa0687370:CDS |
| GGTAGAGCCCCTTGTCAACA+TGG | 0.505052 | 4_4:+52187916 | Msa0687370:CDS |
| TACGCTATTCCGTGGTCTCA+GGG | 0.506036 | 4_4:+52188157 | Msa0687370:CDS |
| GGAAAAGAGGCCATATTTGT+GGG | 0.513523 | 4_4:-52188050 | None:intergenic |
| CTGGACGATCTTACCGTTGG+TGG | 0.514224 | 4_4:+52187995 | Msa0687370:CDS |
| AGAGTACTCATTGTCCTTGG+TGG | 0.515091 | 4_4:-52188125 | None:intergenic |
| CAGACAAGGCCATCCTTTGA+GGG | 0.518053 | 4_4:-52187764 | None:intergenic |
| CTTCTTCCTCTTAGGGCGCA+GGG | 0.523602 | 4_4:-52187552 | None:intergenic |
| ACAAAGAGAGAATGATTGCT+AGG | 0.523767 | 4_4:+52187894 | Msa0687370:CDS |
| CTGAGCAATGTCGGATCTTG+AGG | 0.524921 | 4_4:+52187526 | None:intergenic |
| ATCAGAGTACTCATTGTCCT+TGG | 0.528456 | 4_4:-52188128 | None:intergenic |
| CTGTTATAGGTTCAACTGAA+AGG | 0.528647 | 4_4:-52190684 | Msa0687380:intron |
| TTCGAAGGCCACAACAGTAT+CGG | 0.540909 | 4_4:-52188071 | None:intergenic |
| TTTAACAACCTTCTCAACAT+TGG | 0.541123 | 4_4:-52187723 | None:intergenic |
| CTTGCATATTCCTAAACTCC+AGG | 0.541521 | 4_4:-52190646 | Msa0687380:three_prime_UTR |
| CCACAACAGTATCGGAAAAG+AGG | 0.551694 | 4_4:-52188063 | None:intergenic |
| GTCCTTCAAGACGCGGCAGA+AGG | 0.553756 | 4_4:+52187691 | Msa0687370:CDS |
| CTCATCCCAACAGCGATCCA+CGG | 0.556306 | 4_4:-52187800 | None:intergenic |
| TAATCTGCCCCATGTTGACA+AGG | 0.556764 | 4_4:-52187925 | None:intergenic |
| TATGAATCTTGCACTTGCTG+TGG | 0.564180 | 4_4:+52187964 | Msa0687370:CDS |
| GCTTACGAGCGGTGCAGACA+AGG | 0.572892 | 4_4:-52187778 | None:intergenic |
| CAGAGGAATCCCTCAAAGGA+TGG | 0.580415 | 4_4:+52187755 | Msa0687370:CDS |
| TCTGCACCGCTCGTAAGCCG+TGG | 0.581740 | 4_4:+52187783 | Msa0687370:CDS |
| AATGGGTATAAGCTTGATCT+CGG | 0.583090 | 4_4:-52188203 | None:intergenic |
| GTAGAGCCCCTTGTCAACAT+GGG | 0.583539 | 4_4:+52187917 | Msa0687370:CDS |
| TGTGAGAAAATAAAGTGTGA+AGG | 0.590523 | 4_4:-52187639 | None:intergenic |
| CGTGGTCTCAGGGAACACTT+GGG | 0.593768 | 4_4:+52188167 | Msa0687370:CDS |
| GAGCTGGACGATCTTACCGT+TGG | 0.600852 | 4_4:+52187992 | Msa0687370:CDS |
| TTCTTCCTCTTAGGGCGCAG+GGG | 0.604740 | 4_4:-52187551 | None:intergenic |
| CAAAGAGAGAATGATTGCTA+GGG | 0.605431 | 4_4:+52187895 | Msa0687370:CDS |
| ACCATTTATGAGGCCACCAA+CGG | 0.607260 | 4_4:-52188008 | None:intergenic |
| TTGTTAAACGTCTCAAACAG+AGG | 0.610205 | 4_4:+52187738 | Msa0687370:CDS |
| CAAACAGAGGAATCCCTCAA+AGG | 0.611223 | 4_4:+52187751 | Msa0687370:CDS |
| ATTCATAGGCACAGTCACCC+TGG | 0.614144 | 4_4:-52187948 | None:intergenic |
| ACACGATGCCAATGTTGAGA+AGG | 0.614178 | 4_4:+52187715 | Msa0687370:CDS |
| ATCTGCCAGAACAATTTCGA+AGG | 0.615777 | 4_4:-52188086 | None:intergenic |
| AATCTGCCCCATGTTGACAA+GGG | 0.619059 | 4_4:-52187924 | None:intergenic |
| GAGAAATGTTGACTATAAGA+GGG | 0.622561 | 4_4:+52187820 | Msa0687370:CDS |
| ATCTGCCCCATGTTGACAAG+GGG | 0.624488 | 4_4:-52187923 | None:intergenic |
| TTCTCTTGTTAAAGCCACCA+AGG | 0.648409 | 4_4:+52188111 | Msa0687370:CDS |
| AGCGATCCACGGCTTACGAG+CGG | 0.651614 | 4_4:-52187789 | None:intergenic |
| TAGAGCCCCTTGTCAACATG+GGG | 0.667503 | 4_4:+52187918 | Msa0687370:CDS |
| CAACATGGGGCAGATTACCA+GGG | 0.696657 | 4_4:+52187931 | Msa0687370:CDS |
| AGTGGAAGTCCTTCAAGACG+CGG | 0.706174 | 4_4:+52187684 | Msa0687370:CDS |
| ACTCAGATCTCACATCACCA+AGG | 0.755020 | 4_4:-52187664 | None:intergenic |
| TTGGTGATGTGAGATCTGAG+TGG | 0.784388 | 4_4:+52187666 | Msa0687370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTTTTATAGTTAGTT+AGG | + | chr4_4:52189328-52189347 | Msa0687370:intron | 10.0% |
| !!! | TTTTAATTTTTTATTTTGAG+AGG | - | chr4_4:52190071-52190090 | None:intergenic | 10.0% |
| !!! | AAGAATGAAAATTTTTTGTT+AGG | + | chr4_4:52189267-52189286 | Msa0687370:intron | 15.0% |
| !!! | AGAATGAAAATTTTTTGTTA+GGG | + | chr4_4:52189268-52189287 | Msa0687370:intron | 15.0% |
| !! | ACATTATTAACAAACATATT+TGG | - | chr4_4:52190510-52190529 | Msa0687380:three_prime_UTR | 15.0% |
| !!! | AGTTTTTTTTAGACTTTTTG+TGG | + | chr4_4:52188725-52188744 | Msa0687370:intron | 20.0% |
| !! | ATATAGAAATGAATCAAAGT+TGG | + | chr4_4:52188962-52188981 | Msa0687370:intron | 20.0% |
| !! | GCATTTGATGAAAAAAAAAT+AGG | + | chr4_4:52189134-52189153 | Msa0687370:intron | 20.0% |
| !! | ATATGATAAAGAATCTCTTT+CGG | - | chr4_4:52189437-52189456 | None:intergenic | 20.0% |
| !! | TCAATGTAATTGAACAAAAT+TGG | - | chr4_4:52190470-52190489 | Msa0687380:three_prime_UTR | 20.0% |
| ! | AAATAAAGTGTGAAGGAAAT+GGG | - | chr4_4:52187635-52187654 | None:intergenic | 25.0% |
| ! | AAAATAAAGTGTGAAGGAAA+TGG | - | chr4_4:52187636-52187655 | None:intergenic | 25.0% |
| ! | NNNNTCATGTACTCCTTAAT+GGG | - | chr4_4:52188223-52188242 | None:intergenic | 25.0% |
| ! | NNNNNTCATGTACTCCTTAA+TGG | - | chr4_4:52188224-52188243 | None:intergenic | 25.0% |
| !!! | TTCTTTTCAATTTTGAGGTT+TGG | + | chr4_4:52188423-52188442 | Msa0687370:intron | 25.0% |
| ! | TAGAAACTTTAGATTGAAGA+AGG | + | chr4_4:52188508-52188527 | Msa0687370:intron | 25.0% |
| !! | TTATGGTGATTTGAAGATTT+TGG | + | chr4_4:52188539-52188558 | Msa0687370:intron | 25.0% |
| !!! | TTTTTTCTCTCTCACAAATT+CGG | + | chr4_4:52188584-52188603 | Msa0687370:intron | 25.0% |
| !! | TTAGACTTTTTGTGGATTTT+TGG | + | chr4_4:52188733-52188752 | Msa0687370:intron | 25.0% |
| !!! | TTTTGTGAAAAGTTGACTTT+TGG | + | chr4_4:52189168-52189187 | Msa0687370:intron | 25.0% |
| !!! | ATTTTTTGTTAGGGCAAAAT+TGG | + | chr4_4:52189277-52189296 | Msa0687370:intron | 25.0% |
| !!! | TTTTTTGTTAGGGCAAAATT+GGG | + | chr4_4:52189278-52189297 | Msa0687370:intron | 25.0% |
| !!! | TCATATCATTTTAGTGCTTT+TGG | + | chr4_4:52189451-52189470 | Msa0687370:intron | 25.0% |
| ! | TTGAAGTAAAAAATTTCCAC+TGG | - | chr4_4:52189580-52189599 | None:intergenic | 25.0% |
| !! | TAAAATTTGTTCACCTATGA+TGG | + | chr4_4:52189613-52189632 | Msa0687370:intron | 25.0% |
| ! | ACTAATTCAATAGAGTGAAT+AGG | + | chr4_4:52189697-52189716 | Msa0687370:intron | 25.0% |
| ! | ATTGACATTTGACAAATTCA+AGG | - | chr4_4:52189792-52189811 | None:intergenic | 25.0% |
| !! | ATGCAAAATTTTCCATTGTA+TGG | - | chr4_4:52189899-52189918 | None:intergenic | 25.0% |
| ! | TAGGTGAACAAATATGATAA+AGG | - | chr4_4:52189934-52189953 | None:intergenic | 25.0% |
| ! | TTCAATTCAGAATGAAGTTT+AGG | - | chr4_4:52189953-52189972 | None:intergenic | 25.0% |
| !! | TCATATTTTGTACATCAAGT+GGG | - | chr4_4:52190027-52190046 | None:intergenic | 25.0% |
| !! | TTCATATTTTGTACATCAAG+TGG | - | chr4_4:52190028-52190047 | None:intergenic | 25.0% |
| ! | ACTATTTTGTTCAGTTTCGA+TGG | + | chr4_4:52187585-52187604 | Msa0687370:CDS | 30.0% |
| !!! | ATGGATCCTTGTTATTTTTG+TGG | + | chr4_4:52187604-52187623 | Msa0687370:CDS | 30.0% |
| GAAGAACCACAAAAATAACA+AGG | - | chr4_4:52187613-52187632 | None:intergenic | 30.0% | |
| TGTGAGAAAATAAAGTGTGA+AGG | - | chr4_4:52187642-52187661 | None:intergenic | 30.0% | |
| !!! | CTTTATTTTCTCACATACCT+TGG | + | chr4_4:52187647-52187666 | Msa0687370:CDS | 30.0% |
| TTTAACAACCTTCTCAACAT+TGG | - | chr4_4:52187726-52187745 | None:intergenic | 30.0% | |
| ! | TGAGAAATGTTGACTATAAG+AGG | + | chr4_4:52187819-52187838 | Msa0687370:CDS | 30.0% |
| ! | GAGAAATGTTGACTATAAGA+GGG | + | chr4_4:52187820-52187839 | Msa0687370:CDS | 30.0% |
| ATAAATGGTTATGGGATAGA+AGG | + | chr4_4:52188022-52188041 | Msa0687370:CDS | 30.0% | |
| CAAAATTGAAAAGAAGAAGG+TGG | - | chr4_4:52188418-52188437 | None:intergenic | 30.0% | |
| CCTCAAAATTGAAAAGAAGA+AGG | - | chr4_4:52188421-52188440 | None:intergenic | 30.0% | |
| ! | CCTTCTTCTTTTCAATTTTG+AGG | + | chr4_4:52188418-52188437 | Msa0687370:intron | 30.0% |
| !!! | CTTGAGTTTTTGAGTGTTTT+TGG | + | chr4_4:52188470-52188489 | Msa0687370:intron | 30.0% |
| ! | TGAAGAAGGATGAAGTTTTA+TGG | + | chr4_4:52188522-52188541 | Msa0687370:intron | 30.0% |
| AGCTTATTGGGTATTTATAG+AGG | + | chr4_4:52188623-52188642 | Msa0687370:intron | 30.0% | |
| GCTTATTGGGTATTTATAGA+GGG | + | chr4_4:52188624-52188643 | Msa0687370:intron | 30.0% | |
| TATTTATAGAGGGAGTAACT+TGG | + | chr4_4:52188634-52188653 | Msa0687370:intron | 30.0% | |
| !!! | TTGTCAGAGTTTGTGTTTTT+TGG | + | chr4_4:52188870-52188889 | Msa0687370:intron | 30.0% |
| ! | TGTGCTATTGAAAACACAAT+TGG | + | chr4_4:52188908-52188927 | Msa0687370:intron | 30.0% |
| !! | CAAGTTCTGATTTTTGTGAT+TGG | + | chr4_4:52188934-52188953 | Msa0687370:intron | 30.0% |
| TGTAATACAAGTAGCTAATG+TGG | + | chr4_4:52189092-52189111 | Msa0687370:intron | 30.0% | |
| !! | AAAAGTTGACTTTTGGTCAA+CGG | + | chr4_4:52189175-52189194 | Msa0687370:intron | 30.0% |
| ! | TTTTTGTTAGGGCAAAATTG+GGG | + | chr4_4:52189279-52189298 | Msa0687370:intron | 30.0% |
| TGACTATTTCGACAAATTGA+AGG | - | chr4_4:52189763-52189782 | None:intergenic | 30.0% | |
| AAGTTCAATCATCCATACAA+TGG | + | chr4_4:52189884-52189903 | Msa0687370:intron | 30.0% | |
| ATTTGAATCTCTGTATCTCT+CGG | + | chr4_4:52189990-52190009 | Msa0687370:intron | 30.0% | |
| ATTATTAGTGGTTGTAACAG+TGG | + | chr4_4:52190288-52190307 | Msa0687370:intron | 30.0% | |
| ! | AAAATTGGAAGTCATGGTTT+TGG | - | chr4_4:52190455-52190474 | Msa0687380:three_prime_UTR | 30.0% |
| TTGAACAAAATTGGAAGTCA+TGG | - | chr4_4:52190461-52190480 | Msa0687380:three_prime_UTR | 30.0% | |
| ATATTTGGTCACTAAAGGTA+AGG | - | chr4_4:52190495-52190514 | Msa0687380:three_prime_UTR | 30.0% | |
| CAAACATATTTGGTCACTAA+AGG | - | chr4_4:52190500-52190519 | Msa0687380:three_prime_UTR | 30.0% | |
| ATGTTACAGTTTGACATCAT+AGG | + | chr4_4:52190526-52190545 | Msa0687370:intron | 30.0% | |
| TTGTTAAACGTCTCAAACAG+AGG | + | chr4_4:52187738-52187757 | Msa0687370:CDS | 35.0% | |
| ! | AAGTTGATCTTTCTGCTTTC+AGG | + | chr4_4:52187855-52187874 | Msa0687370:CDS | 35.0% |
| ACAAAGAGAGAATGATTGCT+AGG | + | chr4_4:52187894-52187913 | Msa0687370:CDS | 35.0% | |
| CAAAGAGAGAATGATTGCTA+GGG | + | chr4_4:52187895-52187914 | Msa0687370:CDS | 35.0% | |
| CTATCCCATAACCATTTATG+AGG | - | chr4_4:52188021-52188040 | None:intergenic | 35.0% | |
| ! | ATCTATTTTACGCTATTCCG+TGG | + | chr4_4:52188149-52188168 | Msa0687370:CDS | 35.0% |
| AATGGGTATAAGCTTGATCT+CGG | - | chr4_4:52188206-52188225 | None:intergenic | 35.0% | |
| GATCAAGCTTATACCCATTA+AGG | + | chr4_4:52188207-52188226 | Msa0687370:CDS | 35.0% | |
| TTTCGGTATATTCATACTCC+TGG | - | chr4_4:52188358-52188377 | None:intergenic | 35.0% | |
| TGGAATTGGTTAGACCAATT+CGG | - | chr4_4:52188398-52188417 | None:intergenic | 35.0% | |
| TGAAAAGAAGAAGGTGGAAT+TGG | - | chr4_4:52188412-52188431 | None:intergenic | 35.0% | |
| CATCAATCACTGAGCTTATT+GGG | + | chr4_4:52188611-52188630 | Msa0687370:intron | 35.0% | |
| ! | TTAACCTAATTTTCCACGCT+TGG | - | chr4_4:52188663-52188682 | None:intergenic | 35.0% |
| GTGGAAAATTAGGTTAAGAG+TGG | + | chr4_4:52188666-52188685 | Msa0687370:intron | 35.0% | |
| ! | AGTTGGAATTTTCAGTGTGA+TGG | + | chr4_4:52188979-52188998 | Msa0687370:intron | 35.0% |
| TAATGTGGAAATGATGCTCA+TGG | + | chr4_4:52189107-52189126 | Msa0687370:intron | 35.0% | |
| !! | CTTTGGTCAAATGTTGACTT+TGG | + | chr4_4:52189202-52189221 | Msa0687370:intron | 35.0% |
| !! | CAAATGTTGACTTTGGTCAA+AGG | + | chr4_4:52189209-52189228 | Msa0687370:intron | 35.0% |
| ! | TGAATGAGAGTTTTGCAATC+AGG | - | chr4_4:52189355-52189374 | None:intergenic | 35.0% |
| AAGTTCAATCAACTATCCAG+TGG | + | chr4_4:52189561-52189580 | Msa0687370:intron | 35.0% | |
| ! | AGAGAGCATAATACACACTA+TGG | - | chr4_4:52190130-52190149 | None:intergenic | 35.0% |
| ATGACAAATGACTGTCAAAG+TGG | + | chr4_4:52190214-52190233 | Msa0687370:intron | 35.0% | |
| TAGTAACTGCGATGATAAGA+GGG | + | chr4_4:52190252-52190271 | Msa0687370:intron | 35.0% | |
| ACAACCACTAATAATCACCA+TGG | - | chr4_4:52190283-52190302 | Msa0687380:three_prime_UTR | 35.0% | |
| ! | AACTTTGGTTTCGCATCAAA+TGG | - | chr4_4:52190394-52190413 | Msa0687380:three_prime_UTR | 35.0% |
| GAAACCAAAGTTAGCAAAAC+TGG | + | chr4_4:52190402-52190421 | Msa0687370:intron | 35.0% | |
| CCCAAATCTTCTTCCTCTTA+GGG | - | chr4_4:52187562-52187581 | None:intergenic | 40.0% | |
| CCCTAAGAGGAAGAAGATTT+GGG | + | chr4_4:52187559-52187578 | Msa0687370:CDS | 40.0% | |
| ACCCAAATCTTCTTCCTCTT+AGG | - | chr4_4:52187563-52187582 | None:intergenic | 40.0% | |
| ACAGCAAGTGCAAGATTCAT+AGG | - | chr4_4:52187965-52187984 | None:intergenic | 40.0% | |
| ! | TATGAATCTTGCACTTGCTG+TGG | + | chr4_4:52187964-52187983 | Msa0687370:CDS | 40.0% |
| GTGGCCTCATAAATGGTTAT+GGG | + | chr4_4:52188014-52188033 | Msa0687370:CDS | 40.0% | |
| GAAGGAAGTTCCCACAAATA+TGG | + | chr4_4:52188040-52188059 | Msa0687370:CDS | 40.0% | |
| GGAAAAGAGGCCATATTTGT+GGG | - | chr4_4:52188053-52188072 | None:intergenic | 40.0% | |
| ATCTGCCAGAACAATTTCGA+AGG | - | chr4_4:52188089-52188108 | None:intergenic | 40.0% | |
| TTCGAAATTGTTCTGGCAGA+TGG | + | chr4_4:52188088-52188107 | Msa0687370:CDS | 40.0% | |
| TTCTCTTGTTAAAGCCACCA+AGG | + | chr4_4:52188111-52188130 | Msa0687370:CDS | 40.0% | |
| ! | ATCAGAGTACTCATTGTCCT+TGG | - | chr4_4:52188131-52188150 | None:intergenic | 40.0% |
| GAATTGGTTAGACCAATTCG+GGG | - | chr4_4:52188396-52188415 | None:intergenic | 40.0% | |
| GGAATTGGTTAGACCAATTC+GGG | - | chr4_4:52188397-52188416 | None:intergenic | 40.0% | |
| TTGGAATTCGCGATTCTATG+TGG | + | chr4_4:52188442-52188461 | Msa0687370:intron | 40.0% | |
| ATAAGCTCAGTGATTGATGG+TGG | - | chr4_4:52188610-52188629 | None:intergenic | 40.0% | |
| CCAATAAGCTCAGTGATTGA+TGG | - | chr4_4:52188613-52188632 | None:intergenic | 40.0% | |
| CCATCAATCACTGAGCTTAT+TGG | + | chr4_4:52188610-52188629 | Msa0687370:intron | 40.0% | |
| !! | GGTTCTAGATGCTCAAATTG+TGG | + | chr4_4:52188805-52188824 | Msa0687370:intron | 40.0% |
| AGATGCTCAAATTGTGGTGA+AGG | + | chr4_4:52188811-52188830 | Msa0687370:intron | 40.0% | |
| !! | TTTTGGTCAACGGTTGACTT+TGG | + | chr4_4:52189185-52189204 | Msa0687370:intron | 40.0% |
| CTCACACAAACATCCATCAT+AGG | - | chr4_4:52189629-52189648 | None:intergenic | 40.0% | |
| GTAGTAACTGCGATGATAAG+AGG | + | chr4_4:52190251-52190270 | Msa0687370:intron | 40.0% | |
| AGTAACTGCGATGATAAGAG+GGG | + | chr4_4:52190253-52190272 | Msa0687370:intron | 40.0% | |
| TGGTCCATGGTGATTATTAG+TGG | + | chr4_4:52190276-52190295 | Msa0687370:intron | 40.0% | |
| ! | GCTTCCAGTTTTGCTAACTT+TGG | - | chr4_4:52190409-52190428 | Msa0687380:three_prime_UTR | 40.0% |
| AAGTTAGCAAAACTGGAAGC+CGG | + | chr4_4:52190409-52190428 | Msa0687370:intron | 40.0% | |
| !!! | ATTGGAAGTCATGGTTTTGG+TGG | - | chr4_4:52190452-52190471 | Msa0687380:three_prime_UTR | 40.0% |
| TATTCCTAAACTCCAGGATC+TGG | - | chr4_4:52190643-52190662 | Msa0687380:three_prime_UTR | 40.0% | |
| CTTGCATATTCCTAAACTCC+AGG | - | chr4_4:52190649-52190668 | Msa0687380:three_prime_UTR | 40.0% | |
| GCCCTAAGAGGAAGAAGATT+TGG | + | chr4_4:52187558-52187577 | Msa0687370:CDS | 45.0% | |
| ACTCAGATCTCACATCACCA+AGG | - | chr4_4:52187667-52187686 | None:intergenic | 45.0% | |
| !! | TTGGTGATGTGAGATCTGAG+TGG | + | chr4_4:52187666-52187685 | Msa0687370:CDS | 45.0% |
| ACACGATGCCAATGTTGAGA+AGG | + | chr4_4:52187715-52187734 | Msa0687370:CDS | 45.0% | |
| CAAACAGAGGAATCCCTCAA+AGG | + | chr4_4:52187751-52187770 | Msa0687370:CDS | 45.0% | |
| AATCTGCCCCATGTTGACAA+GGG | - | chr4_4:52187927-52187946 | None:intergenic | 45.0% | |
| TAATCTGCCCCATGTTGACA+AGG | - | chr4_4:52187928-52187947 | None:intergenic | 45.0% | |
| ACCATTTATGAGGCCACCAA+CGG | - | chr4_4:52188011-52188030 | None:intergenic | 45.0% | |
| GGTGGCCTCATAAATGGTTA+TGG | + | chr4_4:52188013-52188032 | Msa0687370:CDS | 45.0% | |
| CGGAAAAGAGGCCATATTTG+TGG | - | chr4_4:52188054-52188073 | None:intergenic | 45.0% | |
| ! | CCACAACAGTATCGGAAAAG+AGG | - | chr4_4:52188066-52188085 | None:intergenic | 45.0% |
| ! | CCTCTTTTCCGATACTGTTG+TGG | + | chr4_4:52188063-52188082 | Msa0687370:CDS | 45.0% |
| TTCGAAGGCCACAACAGTAT+CGG | - | chr4_4:52188074-52188093 | None:intergenic | 45.0% | |
| TGTGGCCTTCGAAATTGTTC+TGG | + | chr4_4:52188081-52188100 | Msa0687370:CDS | 45.0% | |
| ! | AGAGTACTCATTGTCCTTGG+TGG | - | chr4_4:52188128-52188147 | None:intergenic | 45.0% |
| GTCACCAAGCGTGGAAAATT+AGG | + | chr4_4:52188656-52188675 | Msa0687370:intron | 45.0% | |
| ATGATGAGCTGTAGTGTGTG+AGG | + | chr4_4:52188780-52188799 | Msa0687370:intron | 45.0% | |
| GATGTTTGTGTGAGTGAGAG+AGG | + | chr4_4:52189635-52189654 | Msa0687370:intron | 45.0% | |
| GGCACATGATCAGACATTAC+AGG | + | chr4_4:52190357-52190376 | Msa0687370:intron | 45.0% | |
| CAAAACTGGAAGCCGGATTA+AGG | + | chr4_4:52190416-52190435 | Msa0687370:intron | 45.0% | |
| !! | GGAGGTATCTCTCCTTAATC+CGG | - | chr4_4:52190431-52190450 | Msa0687380:three_prime_UTR | 45.0% |
| TGTGAGTCTCAAGAGTCAAG+AGG | - | chr4_4:52190577-52190596 | Msa0687380:three_prime_UTR | 45.0% | |
| ACTGCAAAGGCAACATATGC+TGG | - | chr4_4:52190616-52190635 | Msa0687380:three_prime_UTR | 45.0% | |
| !! | AGGATCTGGCTTTACTGCAA+AGG | - | chr4_4:52190629-52190648 | Msa0687380:three_prime_UTR | 45.0% |
| TTTGCAGTAAAGCCAGATCC+TGG | + | chr4_4:52190628-52190647 | Msa0687370:intron | 45.0% | |
| AAAGCCAGATCCTGGAGTTT+AGG | + | chr4_4:52190636-52190655 | Msa0687370:CDS | 45.0% | |
| !!! | AATTTTTTAATATAATTTGA+GGG | - | chr4_4:52189823-52189842 | None:intergenic | 5.0% |
| !!! | TAATTTTTTAATATAATTTG+AGG | - | chr4_4:52189824-52189843 | None:intergenic | 5.0% |
| AGTGGAAGTCCTTCAAGACG+CGG | + | chr4_4:52187684-52187703 | Msa0687370:CDS | 50.0% | |
| CAGAGGAATCCCTCAAAGGA+TGG | + | chr4_4:52187755-52187774 | Msa0687370:CDS | 50.0% | |
| CAGACAAGGCCATCCTTTGA+GGG | - | chr4_4:52187767-52187786 | None:intergenic | 50.0% | |
| GTAGAGCCCCTTGTCAACAT+GGG | + | chr4_4:52187917-52187936 | Msa0687370:CDS | 50.0% | |
| TAGAGCCCCTTGTCAACATG+GGG | + | chr4_4:52187918-52187937 | Msa0687370:CDS | 50.0% | |
| ATCTGCCCCATGTTGACAAG+GGG | - | chr4_4:52187926-52187945 | None:intergenic | 50.0% | |
| TCAACATGGGGCAGATTACC+AGG | + | chr4_4:52187930-52187949 | Msa0687370:CDS | 50.0% | |
| CAACATGGGGCAGATTACCA+GGG | + | chr4_4:52187931-52187950 | Msa0687370:CDS | 50.0% | |
| ATTCATAGGCACAGTCACCC+TGG | - | chr4_4:52187951-52187970 | None:intergenic | 50.0% | |
| !! | ACCGTTGGTGGCCTCATAAA+TGG | + | chr4_4:52188007-52188026 | Msa0687370:CDS | 50.0% |
| TTACGCTATTCCGTGGTCTC+AGG | + | chr4_4:52188156-52188175 | Msa0687370:CDS | 50.0% | |
| TACGCTATTCCGTGGTCTCA+GGG | + | chr4_4:52188157-52188176 | Msa0687370:CDS | 50.0% | |
| ! | GGCTCAAACAAGGTGGGTTT+CGG | - | chr4_4:52188375-52188394 | None:intergenic | 50.0% |
| ATTCGGGGCTCAAACAAGGT+GGG | - | chr4_4:52188381-52188400 | None:intergenic | 50.0% | |
| AATTCGGGGCTCAAACAAGG+TGG | - | chr4_4:52188382-52188401 | None:intergenic | 50.0% | |
| ! | ACCTTGTTTGAGCCCCGAAT+TGG | + | chr4_4:52188381-52188400 | Msa0687370:intron | 50.0% |
| ACCAATTCGGGGCTCAAACA+AGG | - | chr4_4:52188385-52188404 | None:intergenic | 50.0% | |
| AGTAACTTGGTCACCAAGCG+TGG | + | chr4_4:52188647-52188666 | Msa0687370:intron | 50.0% | |
| TGAGCTGTAGTGTGTGAGGA+TGG | + | chr4_4:52188784-52188803 | Msa0687370:intron | 50.0% | |
| ATTGGGGTATGACAGCTGAC+AGG | + | chr4_4:52189295-52189314 | Msa0687370:intron | 50.0% | |
| TTGGGGTATGACAGCTGACA+GGG | + | chr4_4:52189296-52189315 | Msa0687370:intron | 50.0% | |
| AACTGCGATGATAAGAGGGG+TGG | + | chr4_4:52190256-52190275 | Msa0687370:intron | 50.0% | |
| ATGATAAGAGGGGTGGTCCA+TGG | + | chr4_4:52190263-52190282 | Msa0687370:intron | 50.0% | |
| ! | GTGGTAGCGTGGTAATTGGT+CGG | + | chr4_4:52190336-52190355 | Msa0687370:intron | 50.0% |
| !!! | GGAAGTCATGGTTTTGGTGG+AGG | - | chr4_4:52190449-52190468 | Msa0687380:three_prime_UTR | 50.0% |
| TTCTTCCTCTTAGGGCGCAG+GGG | - | chr4_4:52187554-52187573 | None:intergenic | 55.0% | |
| CTTCTTCCTCTTAGGGCGCA+GGG | - | chr4_4:52187555-52187574 | None:intergenic | 55.0% | |
| TCTTCTTCCTCTTAGGGCGC+AGG | - | chr4_4:52187556-52187575 | None:intergenic | 55.0% | |
| TTCCTTCTGCCGCGTCTTGA+AGG | - | chr4_4:52187696-52187715 | None:intergenic | 55.0% | |
| GCAGACAAGGCCATCCTTTG+AGG | - | chr4_4:52187768-52187787 | None:intergenic | 55.0% | |
| GTAAGCCGTGGATCGCTGTT+GGG | + | chr4_4:52187795-52187814 | Msa0687370:CDS | 55.0% | |
| CTCATCCCAACAGCGATCCA+CGG | - | chr4_4:52187803-52187822 | None:intergenic | 55.0% | |
| GGTAGAGCCCCTTGTCAACA+TGG | + | chr4_4:52187916-52187935 | Msa0687370:CDS | 55.0% | |
| !! | ACTTGCTGTGGTTGCTGAGC+TGG | + | chr4_4:52187976-52187995 | Msa0687370:CDS | 55.0% |
| GAGCTGGACGATCTTACCGT+TGG | + | chr4_4:52187992-52188011 | Msa0687370:CDS | 55.0% | |
| CTGGACGATCTTACCGTTGG+TGG | + | chr4_4:52187995-52188014 | Msa0687370:CDS | 55.0% | |
| CCAAGTGTTCCCTGAGACCA+CGG | - | chr4_4:52188169-52188188 | None:intergenic | 55.0% | |
| CGTGGTCTCAGGGAACACTT+GGG | + | chr4_4:52188167-52188186 | Msa0687370:CDS | 55.0% | |
| CAGTGGTCAGCACATATGCG+TGG | + | chr4_4:52190305-52190324 | Msa0687370:intron | 55.0% | |
| TGGTCAGCACATATGCGTGG+TGG | + | chr4_4:52190308-52190327 | Msa0687370:intron | 55.0% | |
| TCAGCACATATGCGTGGTGG+TGG | + | chr4_4:52190311-52190330 | Msa0687370:intron | 55.0% | |
| ! | GGTGGTGGTAGCGTGGTAAT+TGG | + | chr4_4:52190332-52190351 | Msa0687370:intron | 55.0% |
| GTCCTTCAAGACGCGGCAGA+AGG | + | chr4_4:52187691-52187710 | Msa0687370:CDS | 60.0% | |
| GCTTACGAGCGGTGCAGACA+AGG | - | chr4_4:52187781-52187800 | None:intergenic | 60.0% | |
| AGCGATCCACGGCTTACGAG+CGG | - | chr4_4:52187792-52187811 | None:intergenic | 60.0% | |
| CGTAAGCCGTGGATCGCTGT+TGG | + | chr4_4:52187794-52187813 | Msa0687370:CDS | 60.0% | |
| CCGTGGTCTCAGGGAACACT+TGG | + | chr4_4:52188166-52188185 | Msa0687370:CDS | 60.0% | |
| !! | GCACATATGCGTGGTGGTGG+TGG | + | chr4_4:52190314-52190333 | Msa0687370:intron | 60.0% |
| !! | CATATGCGTGGTGGTGGTGG+TGG | + | chr4_4:52190317-52190336 | Msa0687370:intron | 60.0% |
| TCTGCACCGCTCGTAAGCCG+TGG | + | chr4_4:52187783-52187802 | Msa0687370:CDS | 65.0% | |
| !! | TGGTGGTGGTGGTGGTAGCG+TGG | + | chr4_4:52190325-52190344 | Msa0687370:intron | 65.0% |
| AGGCTCCCCTGCGCCCTAAG+AGG | + | chr4_4:52187546-52187565 | Msa0687370:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 52187533 | 52190695 | 52187533 | ID=Msa0687370;Name=Msa0687370 |
| chr4_4 | mRNA | 52187533 | 52190695 | 52187533 | ID=Msa0687370-mRNA-1;Parent=Msa0687370;Name=Msa0687370-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|0.5|1|1|2|0|252 |
| chr4_4 | exon | 52187533 | 52188230 | 52187533 | ID=Msa0687370-mRNA-1:exon:13659;Parent=Msa0687370-mRNA-1 |
| chr4_4 | exon | 52190635 | 52190695 | 52190635 | ID=Msa0687370-mRNA-1:exon:13660;Parent=Msa0687370-mRNA-1 |
| chr4_4 | CDS | 52187533 | 52188230 | 52187533 | ID=Msa0687370-mRNA-1:cds;Parent=Msa0687370-mRNA-1 |
| chr4_4 | CDS | 52190635 | 52190695 | 52190635 | ID=Msa0687370-mRNA-1:cds;Parent=Msa0687370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
