Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182250 | XP_013470162.1 | 98.297 | 411 | 7 | 0 | 1 | 411 | 1 | 411 | 0.0 | 842 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182250 | sp|Q65XS5|BC10_ORYSJ | 34.194 | 310 | 152 | 9 | 125 | 387 | 85 | 389 | 8.12e-42 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182250 | A0A072W1N5 | 98.297 | 411 | 7 | 0 | 1 | 411 | 1 | 411 | 0.0 | 842 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043480 | Msa0182250 | 0.959915 | 5.694835e-118 | -8.615850e-47 |
| Msa0043630 | Msa0182250 | 0.980156 | 1.426738e-149 | -8.615850e-47 |
| Msa0182200 | Msa0182250 | 0.975540 | 3.855133e-140 | -8.615850e-47 |
| Msa0182250 | Msa1224940 | 0.968824 | 3.137641e-129 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182250 | MtrunA17_Chr1g0209531 | 98.297 | 411 | 7 | 0 | 1 | 411 | 1 | 411 | 0.0 | 842 |
| Msa0182250 | MtrunA17_Chr5g0423131 | 68.542 | 391 | 120 | 2 | 5 | 393 | 1 | 390 | 0.0 | 564 |
| Msa0182250 | MtrunA17_Chr6g0484141 | 54.048 | 420 | 161 | 7 | 5 | 393 | 1 | 419 | 9.57e-159 | 454 |
| Msa0182250 | MtrunA17_Chr5g0394961 | 53.207 | 421 | 160 | 8 | 8 | 393 | 3 | 421 | 7.66e-150 | 431 |
| Msa0182250 | MtrunA17_Chr3g0136091 | 48.293 | 410 | 172 | 7 | 5 | 393 | 3 | 393 | 1.35e-130 | 381 |
| Msa0182250 | MtrunA17_Chr1g0151841 | 55.696 | 316 | 135 | 5 | 82 | 393 | 63 | 377 | 2.22e-130 | 380 |
| Msa0182250 | MtrunA17_Chr2g0276861 | 54.369 | 309 | 138 | 2 | 87 | 393 | 131 | 438 | 8.73e-122 | 360 |
| Msa0182250 | MtrunA17_Chr8g0341461 | 53.896 | 308 | 138 | 4 | 87 | 391 | 105 | 411 | 1.99e-117 | 348 |
| Msa0182250 | MtrunA17_Chr5g0394981 | 64.486 | 214 | 74 | 2 | 181 | 393 | 2 | 214 | 1.12e-97 | 290 |
| Msa0182250 | MtrunA17_Chr4g0073871 | 61.682 | 214 | 80 | 2 | 181 | 393 | 9 | 221 | 2.21e-91 | 275 |
| Msa0182250 | MtrunA17_Chr1g0148241 | 39.418 | 378 | 187 | 9 | 32 | 384 | 30 | 390 | 1.99e-77 | 245 |
| Msa0182250 | MtrunA17_Chr3g0138871 | 41.486 | 323 | 151 | 6 | 91 | 384 | 58 | 371 | 2.73e-74 | 236 |
| Msa0182250 | MtrunA17_Chr4g0071911 | 40.120 | 334 | 166 | 8 | 89 | 399 | 72 | 394 | 3.43e-72 | 231 |
| Msa0182250 | MtrunA17_Chr2g0298501 | 41.590 | 327 | 156 | 9 | 87 | 386 | 68 | 386 | 2.50e-69 | 224 |
| Msa0182250 | MtrunA17_Chr2g0298511 | 41.754 | 285 | 140 | 6 | 124 | 386 | 97 | 377 | 1.18e-67 | 219 |
| Msa0182250 | MtrunA17_Chr2g0289021 | 36.593 | 317 | 157 | 9 | 109 | 384 | 46 | 359 | 7.88e-52 | 178 |
| Msa0182250 | MtrunA17_Chr8g0384601 | 35.714 | 308 | 149 | 9 | 124 | 387 | 55 | 357 | 1.92e-50 | 174 |
| Msa0182250 | MtrunA17_Chr1g0170231 | 34.483 | 319 | 178 | 8 | 95 | 391 | 33 | 342 | 6.21e-47 | 164 |
| Msa0182250 | MtrunA17_Chr3g0137661 | 36.102 | 313 | 183 | 8 | 92 | 391 | 66 | 374 | 1.02e-45 | 162 |
| Msa0182250 | MtrunA17_Chr4g0073881 | 42.995 | 207 | 84 | 6 | 8 | 181 | 3 | 208 | 1.12e-44 | 154 |
| Msa0182250 | MtrunA17_Chr1g0170151 | 35.897 | 312 | 172 | 9 | 99 | 391 | 39 | 341 | 1.51e-40 | 147 |
| Msa0182250 | MtrunA17_Chr2g0322161 | 35.333 | 300 | 149 | 12 | 125 | 391 | 78 | 365 | 3.81e-39 | 144 |
| Msa0182250 | MtrunA17_Chr5g0394971 | 62.791 | 86 | 31 | 1 | 97 | 181 | 1 | 86 | 6.75e-33 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182250 | AT1G68390.1 | 64.744 | 312 | 105 | 4 | 86 | 393 | 98 | 408 | 3.88e-149 | 429 |
| Msa0182250 | AT5G11730.1 | 56.958 | 309 | 130 | 3 | 87 | 393 | 79 | 386 | 6.59e-131 | 382 |
| Msa0182250 | AT3G21310.1 | 55.183 | 328 | 142 | 4 | 70 | 393 | 57 | 383 | 2.97e-129 | 377 |
| Msa0182250 | AT3G21310.3 | 55.183 | 328 | 142 | 4 | 70 | 393 | 57 | 383 | 2.97e-129 | 377 |
| Msa0182250 | AT1G68380.1 | 53.406 | 367 | 160 | 6 | 33 | 393 | 31 | 392 | 4.06e-129 | 377 |
| Msa0182250 | AT1G73810.1 | 51.351 | 407 | 173 | 8 | 8 | 393 | 16 | 418 | 3.63e-127 | 374 |
| Msa0182250 | AT5G25970.1 | 56.026 | 307 | 132 | 3 | 87 | 391 | 80 | 385 | 8.33e-126 | 369 |
| Msa0182250 | AT5G25970.2 | 56.026 | 307 | 132 | 3 | 87 | 391 | 80 | 385 | 8.33e-126 | 369 |
| Msa0182250 | AT5G25970.3 | 56.026 | 307 | 132 | 3 | 87 | 391 | 80 | 385 | 8.33e-126 | 369 |
| Msa0182250 | AT1G10880.1 | 59.107 | 291 | 116 | 3 | 99 | 388 | 93 | 381 | 1.25e-124 | 366 |
| Msa0182250 | AT1G10280.1 | 44.975 | 398 | 189 | 5 | 25 | 393 | 16 | 412 | 4.51e-123 | 363 |
| Msa0182250 | AT1G51770.1 | 53.012 | 332 | 147 | 5 | 70 | 393 | 62 | 392 | 3.34e-121 | 358 |
| Msa0182250 | AT5G16170.1 | 46.684 | 377 | 179 | 5 | 35 | 393 | 37 | 409 | 9.28e-117 | 347 |
| Msa0182250 | AT1G51770.2 | 48.193 | 332 | 136 | 6 | 70 | 393 | 62 | 365 | 3.27e-104 | 313 |
| Msa0182250 | AT4G31350.4 | 42.014 | 288 | 139 | 4 | 124 | 388 | 88 | 370 | 3.92e-74 | 236 |
| Msa0182250 | AT4G31350.1 | 42.014 | 288 | 139 | 4 | 124 | 388 | 88 | 370 | 3.92e-74 | 236 |
| Msa0182250 | AT4G31350.2 | 42.014 | 288 | 139 | 4 | 124 | 388 | 88 | 370 | 3.92e-74 | 236 |
| Msa0182250 | AT4G30060.2 | 39.394 | 330 | 160 | 7 | 86 | 386 | 71 | 389 | 1.86e-71 | 230 |
| Msa0182250 | AT4G30060.1 | 39.394 | 330 | 160 | 7 | 86 | 386 | 71 | 389 | 1.86e-71 | 230 |
| Msa0182250 | AT2G19160.2 | 39.024 | 328 | 168 | 8 | 86 | 388 | 68 | 388 | 2.46e-71 | 229 |
| Msa0182250 | AT2G19160.1 | 39.024 | 328 | 168 | 8 | 86 | 388 | 68 | 388 | 2.46e-71 | 229 |
| Msa0182250 | AT4G31350.3 | 40.000 | 285 | 144 | 3 | 124 | 388 | 88 | 365 | 1.67e-69 | 224 |
| Msa0182250 | AT4G25870.1 | 40.645 | 310 | 159 | 5 | 102 | 388 | 75 | 382 | 5.56e-69 | 223 |
| Msa0182250 | AT3G21310.2 | 54.359 | 195 | 86 | 2 | 70 | 261 | 57 | 251 | 3.30e-68 | 217 |
| Msa0182250 | AT5G57270.3 | 38.182 | 330 | 151 | 7 | 84 | 388 | 80 | 381 | 1.28e-65 | 214 |
| Msa0182250 | AT5G57270.1 | 38.182 | 330 | 151 | 7 | 84 | 388 | 80 | 381 | 1.28e-65 | 214 |
| Msa0182250 | AT5G57270.4 | 38.182 | 330 | 151 | 7 | 84 | 388 | 80 | 381 | 1.28e-65 | 214 |
| Msa0182250 | AT5G57270.5 | 38.182 | 330 | 151 | 7 | 84 | 388 | 80 | 381 | 1.28e-65 | 214 |
| Msa0182250 | AT5G57270.2 | 38.182 | 330 | 151 | 7 | 84 | 388 | 80 | 381 | 1.28e-65 | 214 |
| Msa0182250 | AT5G25330.1 | 33.773 | 379 | 214 | 13 | 30 | 391 | 1 | 359 | 3.09e-53 | 181 |
| Msa0182250 | AT1G62305.1 | 36.218 | 312 | 150 | 10 | 115 | 384 | 60 | 364 | 1.62e-49 | 172 |
| Msa0182250 | AT3G52060.1 | 34.194 | 310 | 178 | 10 | 99 | 391 | 43 | 343 | 3.85e-49 | 170 |
| Msa0182250 | AT5G14550.3 | 35.275 | 309 | 151 | 8 | 121 | 385 | 61 | 364 | 6.13e-49 | 170 |
| Msa0182250 | AT5G14550.1 | 35.161 | 310 | 152 | 8 | 120 | 385 | 60 | 364 | 8.10e-49 | 170 |
| Msa0182250 | AT5G14550.2 | 37.452 | 259 | 140 | 6 | 121 | 360 | 61 | 316 | 7.30e-48 | 167 |
| Msa0182250 | AT1G11940.1 | 37.075 | 294 | 138 | 9 | 124 | 375 | 73 | 361 | 1.25e-47 | 167 |
| Msa0182250 | AT1G62305.3 | 41.629 | 221 | 102 | 6 | 115 | 313 | 60 | 275 | 7.95e-45 | 158 |
| Msa0182250 | AT5G22070.1 | 33.136 | 338 | 169 | 14 | 95 | 391 | 38 | 359 | 1.09e-42 | 154 |
| Msa0182250 | AT1G11940.2 | 46.067 | 178 | 89 | 4 | 124 | 297 | 73 | 247 | 8.86e-42 | 149 |
| Msa0182250 | AT5G14550.4 | 35.862 | 290 | 148 | 10 | 121 | 385 | 61 | 337 | 6.47e-41 | 148 |
| Msa0182250 | AT4G32290.1 | 32.905 | 389 | 212 | 14 | 33 | 391 | 7 | 376 | 6.24e-37 | 139 |
| Msa0182250 | AT1G62305.2 | 32.692 | 312 | 137 | 10 | 115 | 384 | 60 | 340 | 9.50e-36 | 135 |
Find 64 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCACCTATCTCCTAATTT+TGG | 0.184517 | 1_4:-70671744 | Msa0182250:CDS |
| GATAGTAACTTATGTTTATT+AGG | 0.206271 | 1_4:+70669989 | None:intergenic |
| CATTCTAATCCTTCTTATAA+TGG | 0.257546 | 1_4:-70671362 | Msa0182250:CDS |
| TCATCCATATCATGCATAAT+TGG | 0.279929 | 1_4:+70671551 | None:intergenic |
| TCCTCCAATTATGCATGATA+TGG | 0.306477 | 1_4:-70671555 | Msa0182250:CDS |
| TTAAACCAAATACCAAAATT+AGG | 0.314110 | 1_4:+70671732 | None:intergenic |
| CTTTGGTTAGAATAAAGTTT+GGG | 0.319095 | 1_4:-70670258 | Msa0182250:CDS |
| GTTTATTAAGTAAGAATAGA+TGG | 0.333539 | 1_4:+70670510 | None:intergenic |
| CTCTGTCCATTTCAAACCAT+TGG | 0.344014 | 1_4:+70670377 | None:intergenic |
| TTGGGGAAGGAAATTCAAAT+AGG | 0.374868 | 1_4:-70670240 | Msa0182250:CDS |
| GGGAAACCTCGGGTAACATT+TGG | 0.376467 | 1_4:+70670422 | None:intergenic |
| GGTGACAAATGTTGTGTTCT+TGG | 0.377523 | 1_4:+70671629 | None:intergenic |
| CGTTCTTGTTTCACCGCAAT+CGG | 0.394209 | 1_4:+70671605 | None:intergenic |
| TGACTTGGGTTGACTGGTCA+AGG | 0.394569 | 1_4:-70670213 | Msa0182250:CDS |
| ACTTTGGTTAGAATAAAGTT+TGG | 0.400537 | 1_4:-70670259 | Msa0182250:CDS |
| TCTTTGATATAGAGATTGAT+TGG | 0.407880 | 1_4:+70671798 | None:intergenic |
| AAGAAATGCAAGTATAATAA+TGG | 0.408664 | 1_4:-70670121 | Msa0182250:CDS |
| AACTTTATTCTAACCAAAGT+TGG | 0.411378 | 1_4:+70670262 | None:intergenic |
| GAAGTTGAAGAGTGGTATGC+AGG | 0.429293 | 1_4:+70670537 | None:intergenic |
| AAATACCAAAATTAGGAGAT+AGG | 0.433518 | 1_4:+70671739 | None:intergenic |
| AGGGTCCCAATGGTTTGAAA+TGG | 0.440613 | 1_4:-70670383 | Msa0182250:CDS |
| TCTGTCCATTTCAAACCATT+GGG | 0.442280 | 1_4:+70670378 | None:intergenic |
| TATAATGCAGGAAGTTGAAT+GGG | 0.448864 | 1_4:-70670650 | Msa0182250:intron |
| AAGAGCTTTGACAAAGTACT+AGG | 0.449050 | 1_4:+70670055 | None:intergenic |
| GCTCTTGAAGATTGCGCCTA+AGG | 0.449626 | 1_4:-70670038 | Msa0182250:CDS |
| TCCCTCAACGAATGGAGAAA+AGG | 0.452596 | 1_4:-70670403 | Msa0182250:CDS |
| GGAGTTTGACTTGGGTTGAC+TGG | 0.465504 | 1_4:-70670219 | Msa0182250:CDS |
| AGGTGAGAAAATTAATAAAG+TGG | 0.465868 | 1_4:+70671759 | None:intergenic |
| TGAACATTACTTGCCAACTT+TGG | 0.466371 | 1_4:-70670275 | Msa0182250:CDS |
| GACTTGGGTTGACTGGTCAA+GGG | 0.470853 | 1_4:-70670212 | Msa0182250:CDS |
| CTGATATGAGAACAAATCGT+TGG | 0.474721 | 1_4:+70670563 | None:intergenic |
| TGGATGATGAAGAATTGTTA+TGG | 0.474924 | 1_4:-70671535 | Msa0182250:CDS |
| CCCTCAACGAATGGAGAAAA+GGG | 0.478730 | 1_4:-70670402 | Msa0182250:CDS |
| CTATAATGCAGGAAGTTGAA+TGG | 0.492949 | 1_4:-70670651 | Msa0182250:intron |
| ACAAGAACGTGTAGGATTGA+AGG | 0.500595 | 1_4:-70671591 | Msa0182250:CDS |
| TTGGTATTTGGTTTAACACT+TGG | 0.502163 | 1_4:-70671725 | Msa0182250:CDS |
| CGACCACGACCGACCGAGCT+AGG | 0.504404 | 1_4:+70670454 | None:intergenic |
| TTCAAATAGGAGTTTGACTT+GGG | 0.504505 | 1_4:-70670227 | Msa0182250:CDS |
| ATTCAAATAGGAGTTTGACT+TGG | 0.516231 | 1_4:-70670228 | Msa0182250:CDS |
| TGTTCAAACTGCATAACCTT+AGG | 0.519351 | 1_4:+70670022 | None:intergenic |
| GATCCTAGCTCGGTCGGTCG+TGG | 0.528787 | 1_4:-70670457 | Msa0182250:CDS |
| GTTAGAATAAAGTTTGGGGA+AGG | 0.530410 | 1_4:-70670253 | Msa0182250:CDS |
| ACTTGGGTTGACTGGTCAAG+GGG | 0.535261 | 1_4:-70670211 | Msa0182250:CDS |
| CCGAGGTTTCCCTCAACGAA+TGG | 0.536541 | 1_4:-70670411 | Msa0182250:CDS |
| CGGTAGAAGAATTCCCAGTA+AGG | 0.536710 | 1_4:-70671312 | Msa0182250:intron |
| GTCTTATGATGATCCTAGCT+CGG | 0.545878 | 1_4:-70670467 | Msa0182250:CDS |
| TGCAGTTTGAACACTACGAC+AGG | 0.553841 | 1_4:-70670012 | Msa0182250:CDS |
| TGGGTTGACTGGTCAAGGGG+TGG | 0.553874 | 1_4:-70670208 | Msa0182250:CDS |
| AGCAAACAGAAAACATGCAT+TGG | 0.562151 | 1_4:+70670090 | None:intergenic |
| TCCATATCATGCATAATTGG+AGG | 0.565222 | 1_4:+70671554 | None:intergenic |
| CCATTCGTTGAGGGAAACCT+CGG | 0.566873 | 1_4:+70670411 | None:intergenic |
| ATGGACAGAGAACTTGCTCT+AGG | 0.576538 | 1_4:-70670364 | Msa0182250:CDS |
| GGGTGTGATCCATTATAAGA+AGG | 0.577180 | 1_4:+70671353 | None:intergenic |
| ACATTTGTCACCGCCGATTG+CGG | 0.594351 | 1_4:-70671618 | Msa0182250:CDS |
| CATTCGTTGAGGGAAACCTC+GGG | 0.602596 | 1_4:+70670412 | None:intergenic |
| ATATCATGCATAATTGGAGG+AGG | 0.604452 | 1_4:+70671557 | None:intergenic |
| ATGGTTGAGAAGTTGAAGAG+TGG | 0.604831 | 1_4:+70670529 | None:intergenic |
| TCTTGTTTCACCGCAATCGG+CGG | 0.617064 | 1_4:+70671608 | None:intergenic |
| AATGGAGAAAAGGGTCCCAA+TGG | 0.634468 | 1_4:-70670393 | Msa0182250:CDS |
| TTTGGTTAGAATAAAGTTTG+GGG | 0.642533 | 1_4:-70670257 | Msa0182250:CDS |
| TAGCATCCAAATGTTACCCG+AGG | 0.647404 | 1_4:-70670428 | Msa0182250:CDS |
| TATGATGATCCTAGCTCGGT+CGG | 0.674006 | 1_4:-70670463 | Msa0182250:CDS |
| ATAATGCAGGAAGTTGAATG+GGG | 0.703755 | 1_4:-70670649 | Msa0182250:intron |
| GCGGTGAAACAAGAACGTGT+AGG | 0.726920 | 1_4:-70671599 | Msa0182250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATGTTACATTTTAATTTT+TGG | - | chr1_4:70670554-70670573 | Msa0182250:CDS | 10.0% |
| !!! | ATATGTTACATTTTAATTTT+TGG | - | chr1_4:70670554-70670573 | Msa0182250:CDS | 10.0% |
| !! | TATTATGACAGAAAAAATGA+AGG | - | chr1_4:70669973-70669992 | Msa0182250:CDS | 20.0% |
| !! | ATTATGACAGAAAAAATGAA+GGG | - | chr1_4:70669974-70669993 | Msa0182250:CDS | 20.0% |
| !! | TTAAACCAAATACCAAAATT+AGG | + | chr1_4:70670081-70670100 | None:intergenic | 20.0% |
| !! | ATTGAAAAATGATTATTGCT+TGG | - | chr1_4:70670604-70670623 | Msa0182250:CDS | 20.0% |
| !!! | ATTGTGAACTTTTAACAAAA+TGG | - | chr1_4:70670870-70670889 | Msa0182250:intron | 20.0% |
| !! | GTTTATTAAGTAAGAATAGA+TGG | + | chr1_4:70671303-70671322 | None:intergenic | 20.0% |
| !!! | TGATGTTAATGTTAAGTTTT+TGG | - | chr1_4:70671652-70671671 | Msa0182250:CDS | 20.0% |
| !! | AAGAAATGCAAGTATAATAA+TGG | - | chr1_4:70671689-70671708 | Msa0182250:CDS | 20.0% |
| !! | GATAGTAACTTATGTTTATT+AGG | + | chr1_4:70671824-70671843 | None:intergenic | 20.0% |
| !! | TATTATGACAGAAAAAATGA+AGG | - | chr1_4:70669973-70669992 | Msa0182250:CDS | 20.0% |
| !! | ATTATGACAGAAAAAATGAA+GGG | - | chr1_4:70669974-70669993 | Msa0182250:CDS | 20.0% |
| !! | TTAAACCAAATACCAAAATT+AGG | + | chr1_4:70670081-70670100 | None:intergenic | 20.0% |
| !! | ATTGAAAAATGATTATTGCT+TGG | - | chr1_4:70670604-70670623 | Msa0182250:CDS | 20.0% |
| !!! | ATTGTGAACTTTTAACAAAA+TGG | - | chr1_4:70670870-70670889 | Msa0182250:intron | 20.0% |
| !! | GTTTATTAAGTAAGAATAGA+TGG | + | chr1_4:70671303-70671322 | None:intergenic | 20.0% |
| !!! | TGATGTTAATGTTAAGTTTT+TGG | - | chr1_4:70671652-70671671 | Msa0182250:CDS | 20.0% |
| !! | AAGAAATGCAAGTATAATAA+TGG | - | chr1_4:70671689-70671708 | Msa0182250:CDS | 20.0% |
| !! | GATAGTAACTTATGTTTATT+AGG | + | chr1_4:70671824-70671843 | None:intergenic | 20.0% |
| ! | TCTTTGATATAGAGATTGAT+TGG | + | chr1_4:70670015-70670034 | None:intergenic | 25.0% |
| ! | AGGTGAGAAAATTAATAAAG+TGG | + | chr1_4:70670054-70670073 | None:intergenic | 25.0% |
| ! | AAATACCAAAATTAGGAGAT+AGG | + | chr1_4:70670074-70670093 | None:intergenic | 25.0% |
| !!! | TATCTCCTAATTTTGGTATT+TGG | - | chr1_4:70670073-70670092 | Msa0182250:CDS | 25.0% |
| !! | AAAAACATGAATGCAACTTT+TGG | + | chr1_4:70670349-70670368 | None:intergenic | 25.0% |
| ! | CATTCTAATCCTTCTTATAA+TGG | - | chr1_4:70670448-70670467 | Msa0182250:CDS | 25.0% |
| ! | TTGCTTGGATTTAATTCAAA+TGG | - | chr1_4:70670619-70670638 | Msa0182250:CDS | 25.0% |
| !!! | TTTTAGCTAGAATGATGATA+TGG | - | chr1_4:70670816-70670835 | Msa0182250:intron | 25.0% |
| !! | CTTTTAACAAAATGGTACTA+TGG | - | chr1_4:70670878-70670897 | Msa0182250:intron | 25.0% |
| !!! | AAATAAACAGTGATGGATAT+TGG | - | chr1_4:70671123-70671142 | Msa0182250:intron | 25.0% |
| ! | TTGCAATATTCTTGAAAAAC+TGG | + | chr1_4:70671497-70671516 | None:intergenic | 25.0% |
| !!! | GTTTTTCAAGAATATTGCAA+AGG | - | chr1_4:70671497-70671516 | Msa0182250:CDS | 25.0% |
| ! | AACTTTATTCTAACCAAAGT+TGG | + | chr1_4:70671551-70671570 | None:intergenic | 25.0% |
| ! | ACTTTGGTTAGAATAAAGTT+TGG | - | chr1_4:70671551-70671570 | Msa0182250:CDS | 25.0% |
| ! | CTTTGGTTAGAATAAAGTTT+GGG | - | chr1_4:70671552-70671571 | Msa0182250:CDS | 25.0% |
| ! | TTTGGTTAGAATAAAGTTTG+GGG | - | chr1_4:70671553-70671572 | Msa0182250:CDS | 25.0% |
| !!! | TTAAGTTTTTGGAGAGATTA+AGG | - | chr1_4:70671663-70671682 | Msa0182250:CDS | 25.0% |
| ! | TCTTTGATATAGAGATTGAT+TGG | + | chr1_4:70670015-70670034 | None:intergenic | 25.0% |
| ! | AGGTGAGAAAATTAATAAAG+TGG | + | chr1_4:70670054-70670073 | None:intergenic | 25.0% |
| ! | AAATACCAAAATTAGGAGAT+AGG | + | chr1_4:70670074-70670093 | None:intergenic | 25.0% |
| !!! | TATCTCCTAATTTTGGTATT+TGG | - | chr1_4:70670073-70670092 | Msa0182250:CDS | 25.0% |
| !! | AAAAACATGAATGCAACTTT+TGG | + | chr1_4:70670349-70670368 | None:intergenic | 25.0% |
| ! | CATTCTAATCCTTCTTATAA+TGG | - | chr1_4:70670448-70670467 | Msa0182250:CDS | 25.0% |
| ! | TTGCTTGGATTTAATTCAAA+TGG | - | chr1_4:70670619-70670638 | Msa0182250:CDS | 25.0% |
| !!! | TTTTAGCTAGAATGATGATA+TGG | - | chr1_4:70670816-70670835 | Msa0182250:intron | 25.0% |
| !! | CTTTTAACAAAATGGTACTA+TGG | - | chr1_4:70670878-70670897 | Msa0182250:intron | 25.0% |
| !!! | AAATAAACAGTGATGGATAT+TGG | - | chr1_4:70671123-70671142 | Msa0182250:intron | 25.0% |
| ! | TTGCAATATTCTTGAAAAAC+TGG | + | chr1_4:70671497-70671516 | None:intergenic | 25.0% |
| !!! | GTTTTTCAAGAATATTGCAA+AGG | - | chr1_4:70671497-70671516 | Msa0182250:CDS | 25.0% |
| ! | AACTTTATTCTAACCAAAGT+TGG | + | chr1_4:70671551-70671570 | None:intergenic | 25.0% |
| ! | ACTTTGGTTAGAATAAAGTT+TGG | - | chr1_4:70671551-70671570 | Msa0182250:CDS | 25.0% |
| ! | CTTTGGTTAGAATAAAGTTT+GGG | - | chr1_4:70671552-70671571 | Msa0182250:CDS | 25.0% |
| ! | TTTGGTTAGAATAAAGTTTG+GGG | - | chr1_4:70671553-70671572 | Msa0182250:CDS | 25.0% |
| !!! | TTAAGTTTTTGGAGAGATTA+AGG | - | chr1_4:70671663-70671682 | Msa0182250:CDS | 25.0% |
| ! | TTGGTATTTGGTTTAACACT+TGG | - | chr1_4:70670085-70670104 | Msa0182250:CDS | 30.0% |
| TCATCCATATCATGCATAAT+TGG | + | chr1_4:70670262-70670281 | None:intergenic | 30.0% | |
| TGGATGATGAAGAATTGTTA+TGG | - | chr1_4:70670275-70670294 | Msa0182250:CDS | 30.0% | |
| !! | TTGCATTCATGTTTTTGACA+AGG | - | chr1_4:70670353-70670372 | Msa0182250:CDS | 30.0% |
| !! | TGCATTCATGTTTTTGACAA+GGG | - | chr1_4:70670354-70670373 | Msa0182250:CDS | 30.0% |
| !! | AGTTTTTCAAAGGTCATGAA+GGG | - | chr1_4:70670407-70670426 | Msa0182250:CDS | 30.0% |
| AAAAACTAACTGACCTTACT+GGG | + | chr1_4:70670514-70670533 | None:intergenic | 30.0% | |
| AAAAAACTAACTGACCTTAC+TGG | + | chr1_4:70670515-70670534 | None:intergenic | 30.0% | |
| CAGATTAAGACAATAGAGAA+TGG | + | chr1_4:70670581-70670600 | None:intergenic | 30.0% | |
| ! | ATATAACAAGACTTTTGCAC+AGG | + | chr1_4:70670664-70670683 | None:intergenic | 30.0% |
| ! | ATGCATACTTGTTTCTTTGT+AGG | - | chr1_4:70671062-70671081 | Msa0182250:intron | 30.0% |
| TCTCTGTTGTAATAAGTTAC+TGG | + | chr1_4:70671104-70671123 | None:intergenic | 30.0% | |
| AACAGAGAAATAAACAGTGA+TGG | - | chr1_4:70671116-70671135 | Msa0182250:intron | 30.0% | |
| TATAATGCAGGAAGTTGAAT+GGG | - | chr1_4:70671160-70671179 | Msa0182250:intron | 30.0% | |
| ATTCAAATAGGAGTTTGACT+TGG | - | chr1_4:70671582-70671601 | Msa0182250:CDS | 30.0% | |
| ! | TTCAAATAGGAGTTTGACTT+GGG | - | chr1_4:70671583-70671602 | Msa0182250:CDS | 30.0% |
| ! | TTGGTATTTGGTTTAACACT+TGG | - | chr1_4:70670085-70670104 | Msa0182250:CDS | 30.0% |
| TCATCCATATCATGCATAAT+TGG | + | chr1_4:70670262-70670281 | None:intergenic | 30.0% | |
| TGGATGATGAAGAATTGTTA+TGG | - | chr1_4:70670275-70670294 | Msa0182250:CDS | 30.0% | |
| !! | TTGCATTCATGTTTTTGACA+AGG | - | chr1_4:70670353-70670372 | Msa0182250:CDS | 30.0% |
| !! | TGCATTCATGTTTTTGACAA+GGG | - | chr1_4:70670354-70670373 | Msa0182250:CDS | 30.0% |
| !! | AGTTTTTCAAAGGTCATGAA+GGG | - | chr1_4:70670407-70670426 | Msa0182250:CDS | 30.0% |
| AAAAACTAACTGACCTTACT+GGG | + | chr1_4:70670514-70670533 | None:intergenic | 30.0% | |
| AAAAAACTAACTGACCTTAC+TGG | + | chr1_4:70670515-70670534 | None:intergenic | 30.0% | |
| CAGATTAAGACAATAGAGAA+TGG | + | chr1_4:70670581-70670600 | None:intergenic | 30.0% | |
| ! | ATATAACAAGACTTTTGCAC+AGG | + | chr1_4:70670664-70670683 | None:intergenic | 30.0% |
| ! | ATGCATACTTGTTTCTTTGT+AGG | - | chr1_4:70671062-70671081 | Msa0182250:intron | 30.0% |
| TCTCTGTTGTAATAAGTTAC+TGG | + | chr1_4:70671104-70671123 | None:intergenic | 30.0% | |
| AACAGAGAAATAAACAGTGA+TGG | - | chr1_4:70671116-70671135 | Msa0182250:intron | 30.0% | |
| TATAATGCAGGAAGTTGAAT+GGG | - | chr1_4:70671160-70671179 | Msa0182250:intron | 30.0% | |
| ATTCAAATAGGAGTTTGACT+TGG | - | chr1_4:70671582-70671601 | Msa0182250:CDS | 30.0% | |
| ! | TTCAAATAGGAGTTTGACTT+GGG | - | chr1_4:70671583-70671602 | Msa0182250:CDS | 30.0% |
| ! | TCTCACCTATCTCCTAATTT+TGG | - | chr1_4:70670066-70670085 | Msa0182250:CDS | 35.0% |
| ATATCATGCATAATTGGAGG+AGG | + | chr1_4:70670256-70670275 | None:intergenic | 35.0% | |
| TCCTCCAATTATGCATGATA+TGG | - | chr1_4:70670255-70670274 | Msa0182250:CDS | 35.0% | |
| TCCATATCATGCATAATTGG+AGG | + | chr1_4:70670259-70670278 | None:intergenic | 35.0% | |
| !!! | CTTTTGGAACTCGTTCAAAA+GGG | + | chr1_4:70670333-70670352 | None:intergenic | 35.0% |
| !!! | ACTTTTGGAACTCGTTCAAA+AGG | + | chr1_4:70670334-70670353 | None:intergenic | 35.0% |
| !! | GCATTCATGTTTTTGACAAG+GGG | - | chr1_4:70670355-70670374 | Msa0182250:CDS | 35.0% |
| TTGAAAAACTGTTCCCACAA+AGG | + | chr1_4:70670397-70670416 | None:intergenic | 35.0% | |
| !! | TTGTGGGAACAGTTTTTCAA+AGG | - | chr1_4:70670397-70670416 | Msa0182250:CDS | 35.0% |
| !! | CAGTTTTTCAAAGGTCATGA+AGG | - | chr1_4:70670406-70670425 | Msa0182250:CDS | 35.0% |
| ATTCTTCTACCGTGAAAAAC+AGG | + | chr1_4:70670490-70670509 | None:intergenic | 35.0% | |
| AAGCCAAGTGAAGAGTAAAA+TGG | - | chr1_4:70670727-70670746 | Msa0182250:intron | 35.0% | |
| AGCCAAGTGAAGAGTAAAAT+GGG | - | chr1_4:70670728-70670747 | Msa0182250:intron | 35.0% | |
| CAAAATTGTCCAGTCAAACA+AGG | - | chr1_4:70671002-70671021 | Msa0182250:intron | 35.0% | |
| ! | ACTTTAAGTCCTTGTTTGAC+TGG | + | chr1_4:70671014-70671033 | None:intergenic | 35.0% |
| AACTAACCCTTCTATAATGC+AGG | - | chr1_4:70671148-70671167 | Msa0182250:intron | 35.0% | |
| CAACTTCCTGCATTATAGAA+GGG | + | chr1_4:70671157-70671176 | None:intergenic | 35.0% | |
| TCAACTTCCTGCATTATAGA+AGG | + | chr1_4:70671158-70671177 | None:intergenic | 35.0% | |
| CTATAATGCAGGAAGTTGAA+TGG | - | chr1_4:70671159-70671178 | Msa0182250:intron | 35.0% | |
| ATAATGCAGGAAGTTGAATG+GGG | - | chr1_4:70671161-70671180 | Msa0182250:intron | 35.0% | |
| CTGATATGAGAACAAATCGT+TGG | + | chr1_4:70671250-70671269 | None:intergenic | 35.0% | |
| TCTGTCCATTTCAAACCATT+GGG | + | chr1_4:70671435-70671454 | None:intergenic | 35.0% | |
| TGAACATTACTTGCCAACTT+TGG | - | chr1_4:70671535-70671554 | Msa0182250:CDS | 35.0% | |
| GTTAGAATAAAGTTTGGGGA+AGG | - | chr1_4:70671557-70671576 | Msa0182250:CDS | 35.0% | |
| TTGGGGAAGGAAATTCAAAT+AGG | - | chr1_4:70671570-70671589 | Msa0182250:CDS | 35.0% | |
| TCAGATCTCAAAAAATGAGC+TGG | + | chr1_4:70671635-70671654 | None:intergenic | 35.0% | |
| AGCAAACAGAAAACATGCAT+TGG | + | chr1_4:70671723-70671742 | None:intergenic | 35.0% | |
| ! | ATGCATGTTTTCTGTTTGCT+AGG | - | chr1_4:70671723-70671742 | Msa0182250:CDS | 35.0% |
| ! | AAGAGCTTTGACAAAGTACT+AGG | + | chr1_4:70671758-70671777 | None:intergenic | 35.0% |
| TGTTCAAACTGCATAACCTT+AGG | + | chr1_4:70671791-70671810 | None:intergenic | 35.0% | |
| ! | TCTCACCTATCTCCTAATTT+TGG | - | chr1_4:70670066-70670085 | Msa0182250:CDS | 35.0% |
| ATATCATGCATAATTGGAGG+AGG | + | chr1_4:70670256-70670275 | None:intergenic | 35.0% | |
| TCCTCCAATTATGCATGATA+TGG | - | chr1_4:70670255-70670274 | Msa0182250:CDS | 35.0% | |
| TCCATATCATGCATAATTGG+AGG | + | chr1_4:70670259-70670278 | None:intergenic | 35.0% | |
| !!! | CTTTTGGAACTCGTTCAAAA+GGG | + | chr1_4:70670333-70670352 | None:intergenic | 35.0% |
| !!! | ACTTTTGGAACTCGTTCAAA+AGG | + | chr1_4:70670334-70670353 | None:intergenic | 35.0% |
| !! | GCATTCATGTTTTTGACAAG+GGG | - | chr1_4:70670355-70670374 | Msa0182250:CDS | 35.0% |
| TTGAAAAACTGTTCCCACAA+AGG | + | chr1_4:70670397-70670416 | None:intergenic | 35.0% | |
| !! | TTGTGGGAACAGTTTTTCAA+AGG | - | chr1_4:70670397-70670416 | Msa0182250:CDS | 35.0% |
| !! | CAGTTTTTCAAAGGTCATGA+AGG | - | chr1_4:70670406-70670425 | Msa0182250:CDS | 35.0% |
| ATTCTTCTACCGTGAAAAAC+AGG | + | chr1_4:70670490-70670509 | None:intergenic | 35.0% | |
| AAGCCAAGTGAAGAGTAAAA+TGG | - | chr1_4:70670727-70670746 | Msa0182250:intron | 35.0% | |
| AGCCAAGTGAAGAGTAAAAT+GGG | - | chr1_4:70670728-70670747 | Msa0182250:intron | 35.0% | |
| CAAAATTGTCCAGTCAAACA+AGG | - | chr1_4:70671002-70671021 | Msa0182250:intron | 35.0% | |
| ! | ACTTTAAGTCCTTGTTTGAC+TGG | + | chr1_4:70671014-70671033 | None:intergenic | 35.0% |
| AACTAACCCTTCTATAATGC+AGG | - | chr1_4:70671148-70671167 | Msa0182250:intron | 35.0% | |
| CAACTTCCTGCATTATAGAA+GGG | + | chr1_4:70671157-70671176 | None:intergenic | 35.0% | |
| TCAACTTCCTGCATTATAGA+AGG | + | chr1_4:70671158-70671177 | None:intergenic | 35.0% | |
| CTATAATGCAGGAAGTTGAA+TGG | - | chr1_4:70671159-70671178 | Msa0182250:intron | 35.0% | |
| ATAATGCAGGAAGTTGAATG+GGG | - | chr1_4:70671161-70671180 | Msa0182250:intron | 35.0% | |
| CTGATATGAGAACAAATCGT+TGG | + | chr1_4:70671250-70671269 | None:intergenic | 35.0% | |
| TCTGTCCATTTCAAACCATT+GGG | + | chr1_4:70671435-70671454 | None:intergenic | 35.0% | |
| TGAACATTACTTGCCAACTT+TGG | - | chr1_4:70671535-70671554 | Msa0182250:CDS | 35.0% | |
| GTTAGAATAAAGTTTGGGGA+AGG | - | chr1_4:70671557-70671576 | Msa0182250:CDS | 35.0% | |
| TTGGGGAAGGAAATTCAAAT+AGG | - | chr1_4:70671570-70671589 | Msa0182250:CDS | 35.0% | |
| TCAGATCTCAAAAAATGAGC+TGG | + | chr1_4:70671635-70671654 | None:intergenic | 35.0% | |
| AGCAAACAGAAAACATGCAT+TGG | + | chr1_4:70671723-70671742 | None:intergenic | 35.0% | |
| ! | ATGCATGTTTTCTGTTTGCT+AGG | - | chr1_4:70671723-70671742 | Msa0182250:CDS | 35.0% |
| ! | AAGAGCTTTGACAAAGTACT+AGG | + | chr1_4:70671758-70671777 | None:intergenic | 35.0% |
| TGTTCAAACTGCATAACCTT+AGG | + | chr1_4:70671791-70671810 | None:intergenic | 35.0% | |
| GGTGACAAATGTTGTGTTCT+TGG | + | chr1_4:70670184-70670203 | None:intergenic | 40.0% | |
| ACAAGAACGTGTAGGATTGA+AGG | - | chr1_4:70670219-70670238 | Msa0182250:CDS | 40.0% | |
| !!! | TGTGTTTTTGGCACCTTTGT+GGG | - | chr1_4:70670381-70670400 | Msa0182250:CDS | 40.0% |
| GGGTGTGATCCATTATAAGA+AGG | + | chr1_4:70670460-70670479 | None:intergenic | 40.0% | |
| GCCAAGTGAAGAGTAAAATG+GGG | - | chr1_4:70670729-70670748 | Msa0182250:intron | 40.0% | |
| ! | TCCCCATTTTACTCTTCACT+TGG | + | chr1_4:70670733-70670752 | None:intergenic | 40.0% |
| GTGAAGAGTAAAATGGGGAA+AGG | - | chr1_4:70670734-70670753 | Msa0182250:intron | 40.0% | |
| ATGGTTGAGAAGTTGAAGAG+TGG | + | chr1_4:70671284-70671303 | None:intergenic | 40.0% | |
| GTCTTATGATGATCCTAGCT+CGG | - | chr1_4:70671343-70671362 | Msa0182250:CDS | 40.0% | |
| CTCTGTCCATTTCAAACCAT+TGG | + | chr1_4:70671436-70671455 | None:intergenic | 40.0% | |
| CTCAAAAAATGAGCTGGATG+TGG | + | chr1_4:70671629-70671648 | None:intergenic | 40.0% | |
| GGTGACAAATGTTGTGTTCT+TGG | + | chr1_4:70670184-70670203 | None:intergenic | 40.0% | |
| ACAAGAACGTGTAGGATTGA+AGG | - | chr1_4:70670219-70670238 | Msa0182250:CDS | 40.0% | |
| !!! | TGTGTTTTTGGCACCTTTGT+GGG | - | chr1_4:70670381-70670400 | Msa0182250:CDS | 40.0% |
| GGGTGTGATCCATTATAAGA+AGG | + | chr1_4:70670460-70670479 | None:intergenic | 40.0% | |
| GCCAAGTGAAGAGTAAAATG+GGG | - | chr1_4:70670729-70670748 | Msa0182250:intron | 40.0% | |
| ! | TCCCCATTTTACTCTTCACT+TGG | + | chr1_4:70670733-70670752 | None:intergenic | 40.0% |
| GTGAAGAGTAAAATGGGGAA+AGG | - | chr1_4:70670734-70670753 | Msa0182250:intron | 40.0% | |
| ATGGTTGAGAAGTTGAAGAG+TGG | + | chr1_4:70671284-70671303 | None:intergenic | 40.0% | |
| GTCTTATGATGATCCTAGCT+CGG | - | chr1_4:70671343-70671362 | Msa0182250:CDS | 40.0% | |
| CTCTGTCCATTTCAAACCAT+TGG | + | chr1_4:70671436-70671455 | None:intergenic | 40.0% | |
| CTCAAAAAATGAGCTGGATG+TGG | + | chr1_4:70671629-70671648 | None:intergenic | 40.0% | |
| ! | CGTTCTTGTTTCACCGCAAT+CGG | + | chr1_4:70670208-70670227 | None:intergenic | 45.0% |
| !!! | CTGTGTTTTTGGCACCTTTG+TGG | - | chr1_4:70670380-70670399 | Msa0182250:CDS | 45.0% |
| CGTGAAAAACAGGACTCTCA+GGG | + | chr1_4:70670480-70670499 | None:intergenic | 45.0% | |
| !! | CCTGAGAGTCCTGTTTTTCA+CGG | - | chr1_4:70670478-70670497 | Msa0182250:CDS | 45.0% |
| CGGTAGAAGAATTCCCAGTA+AGG | - | chr1_4:70670498-70670517 | Msa0182250:CDS | 45.0% | |
| GAAGTTGAAGAGTGGTATGC+AGG | + | chr1_4:70671276-70671295 | None:intergenic | 45.0% | |
| TATGATGATCCTAGCTCGGT+CGG | - | chr1_4:70671347-70671366 | Msa0182250:CDS | 45.0% | |
| TAGCATCCAAATGTTACCCG+AGG | - | chr1_4:70671382-70671401 | Msa0182250:CDS | 45.0% | |
| TCCCTCAACGAATGGAGAAA+AGG | - | chr1_4:70671407-70671426 | Msa0182250:CDS | 45.0% | |
| ! | CCCTTTTCTCCATTCGTTGA+GGG | + | chr1_4:70671411-70671430 | None:intergenic | 45.0% |
| CCCTCAACGAATGGAGAAAA+GGG | - | chr1_4:70671408-70671427 | Msa0182250:CDS | 45.0% | |
| ! | ACCCTTTTCTCCATTCGTTG+AGG | + | chr1_4:70671412-70671431 | None:intergenic | 45.0% |
| AATGGAGAAAAGGGTCCCAA+TGG | - | chr1_4:70671417-70671436 | Msa0182250:CDS | 45.0% | |
| AGGGTCCCAATGGTTTGAAA+TGG | - | chr1_4:70671427-70671446 | Msa0182250:CDS | 45.0% | |
| ! | ATGGACAGAGAACTTGCTCT+AGG | - | chr1_4:70671446-70671465 | Msa0182250:CDS | 45.0% |
| TGCAGTTTGAACACTACGAC+AGG | - | chr1_4:70671798-70671817 | Msa0182250:CDS | 45.0% | |
| ! | CGTTCTTGTTTCACCGCAAT+CGG | + | chr1_4:70670208-70670227 | None:intergenic | 45.0% |
| !!! | CTGTGTTTTTGGCACCTTTG+TGG | - | chr1_4:70670380-70670399 | Msa0182250:CDS | 45.0% |
| CGTGAAAAACAGGACTCTCA+GGG | + | chr1_4:70670480-70670499 | None:intergenic | 45.0% | |
| !! | CCTGAGAGTCCTGTTTTTCA+CGG | - | chr1_4:70670478-70670497 | Msa0182250:CDS | 45.0% |
| CGGTAGAAGAATTCCCAGTA+AGG | - | chr1_4:70670498-70670517 | Msa0182250:CDS | 45.0% | |
| GAAGTTGAAGAGTGGTATGC+AGG | + | chr1_4:70671276-70671295 | None:intergenic | 45.0% | |
| TATGATGATCCTAGCTCGGT+CGG | - | chr1_4:70671347-70671366 | Msa0182250:CDS | 45.0% | |
| TAGCATCCAAATGTTACCCG+AGG | - | chr1_4:70671382-70671401 | Msa0182250:CDS | 45.0% | |
| TCCCTCAACGAATGGAGAAA+AGG | - | chr1_4:70671407-70671426 | Msa0182250:CDS | 45.0% | |
| ! | CCCTTTTCTCCATTCGTTGA+GGG | + | chr1_4:70671411-70671430 | None:intergenic | 45.0% |
| CCCTCAACGAATGGAGAAAA+GGG | - | chr1_4:70671408-70671427 | Msa0182250:CDS | 45.0% | |
| ! | ACCCTTTTCTCCATTCGTTG+AGG | + | chr1_4:70671412-70671431 | None:intergenic | 45.0% |
| AATGGAGAAAAGGGTCCCAA+TGG | - | chr1_4:70671417-70671436 | Msa0182250:CDS | 45.0% | |
| AGGGTCCCAATGGTTTGAAA+TGG | - | chr1_4:70671427-70671446 | Msa0182250:CDS | 45.0% | |
| ! | ATGGACAGAGAACTTGCTCT+AGG | - | chr1_4:70671446-70671465 | Msa0182250:CDS | 45.0% |
| TGCAGTTTGAACACTACGAC+AGG | - | chr1_4:70671798-70671817 | Msa0182250:CDS | 45.0% | |
| ! | ACATTTGTCACCGCCGATTG+CGG | - | chr1_4:70670192-70670211 | Msa0182250:CDS | 50.0% |
| ! | TCTTGTTTCACCGCAATCGG+CGG | + | chr1_4:70670205-70670224 | None:intergenic | 50.0% |
| GCGGTGAAACAAGAACGTGT+AGG | - | chr1_4:70670211-70670230 | Msa0182250:CDS | 50.0% | |
| !!! | GACAAGGGGTGCTGTGTTTT+TGG | - | chr1_4:70670369-70670388 | Msa0182250:CDS | 50.0% |
| CCGTGAAAAACAGGACTCTC+AGG | + | chr1_4:70670481-70670500 | None:intergenic | 50.0% | |
| GGGAAACCTCGGGTAACATT+TGG | + | chr1_4:70671391-70671410 | None:intergenic | 50.0% | |
| CATTCGTTGAGGGAAACCTC+GGG | + | chr1_4:70671401-70671420 | None:intergenic | 50.0% | |
| CCATTCGTTGAGGGAAACCT+CGG | + | chr1_4:70671402-70671421 | None:intergenic | 50.0% | |
| !! | GGAGTTTGACTTGGGTTGAC+TGG | - | chr1_4:70671591-70671610 | Msa0182250:CDS | 50.0% |
| !! | TGACTTGGGTTGACTGGTCA+AGG | - | chr1_4:70671597-70671616 | Msa0182250:CDS | 50.0% |
| !! | GACTTGGGTTGACTGGTCAA+GGG | - | chr1_4:70671598-70671617 | Msa0182250:CDS | 50.0% |
| !! | ACTTGGGTTGACTGGTCAAG+GGG | - | chr1_4:70671599-70671618 | Msa0182250:CDS | 50.0% |
| GCTCTTGAAGATTGCGCCTA+AGG | - | chr1_4:70671772-70671791 | Msa0182250:CDS | 50.0% | |
| ! | ACATTTGTCACCGCCGATTG+CGG | - | chr1_4:70670192-70670211 | Msa0182250:CDS | 50.0% |
| ! | TCTTGTTTCACCGCAATCGG+CGG | + | chr1_4:70670205-70670224 | None:intergenic | 50.0% |
| GCGGTGAAACAAGAACGTGT+AGG | - | chr1_4:70670211-70670230 | Msa0182250:CDS | 50.0% | |
| !!! | GACAAGGGGTGCTGTGTTTT+TGG | - | chr1_4:70670369-70670388 | Msa0182250:CDS | 50.0% |
| CCGTGAAAAACAGGACTCTC+AGG | + | chr1_4:70670481-70670500 | None:intergenic | 50.0% | |
| GGGAAACCTCGGGTAACATT+TGG | + | chr1_4:70671391-70671410 | None:intergenic | 50.0% | |
| CATTCGTTGAGGGAAACCTC+GGG | + | chr1_4:70671401-70671420 | None:intergenic | 50.0% | |
| CCATTCGTTGAGGGAAACCT+CGG | + | chr1_4:70671402-70671421 | None:intergenic | 50.0% | |
| !! | GGAGTTTGACTTGGGTTGAC+TGG | - | chr1_4:70671591-70671610 | Msa0182250:CDS | 50.0% |
| !! | TGACTTGGGTTGACTGGTCA+AGG | - | chr1_4:70671597-70671616 | Msa0182250:CDS | 50.0% |
| !! | GACTTGGGTTGACTGGTCAA+GGG | - | chr1_4:70671598-70671617 | Msa0182250:CDS | 50.0% |
| !! | ACTTGGGTTGACTGGTCAAG+GGG | - | chr1_4:70671599-70671618 | Msa0182250:CDS | 50.0% |
| GCTCTTGAAGATTGCGCCTA+AGG | - | chr1_4:70671772-70671791 | Msa0182250:CDS | 50.0% | |
| CCGAGGTTTCCCTCAACGAA+TGG | - | chr1_4:70671399-70671418 | Msa0182250:CDS | 55.0% | |
| CCGAGGTTTCCCTCAACGAA+TGG | - | chr1_4:70671399-70671418 | Msa0182250:CDS | 55.0% | |
| ! | TGGGTTGACTGGTCAAGGGG+TGG | - | chr1_4:70671602-70671621 | Msa0182250:CDS | 60.0% |
| ! | TGGGTTGACTGGTCAAGGGG+TGG | - | chr1_4:70671602-70671621 | Msa0182250:CDS | 60.0% |
| GATCCTAGCTCGGTCGGTCG+TGG | - | chr1_4:70671353-70671372 | Msa0182250:CDS | 65.0% | |
| GATCCTAGCTCGGTCGGTCG+TGG | - | chr1_4:70671353-70671372 | Msa0182250:CDS | 65.0% | |
| CGACCACGACCGACCGAGCT+AGG | + | chr1_4:70671359-70671378 | None:intergenic | 70.0% | |
| CGACCACGACCGACCGAGCT+AGG | + | chr1_4:70671359-70671378 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 70669970 | 70671862 | 70669970 | ID=Msa0182250;Name=Msa0182250 |
| chr1_4 | mRNA | 70669970 | 70671862 | 70669970 | ID=Msa0182250-mRNA-1;Parent=Msa0182250;Name=Msa0182250-mRNA-1;_AED=0.05;_eAED=0.05;_QI=7|1|0.5|1|1|1|2|0|411 |
| chr1_4 | exon | 70669970 | 70670662 | 70669970 | ID=Msa0182250-mRNA-1:exon:23660;Parent=Msa0182250-mRNA-1 |
| chr1_4 | exon | 70671313 | 70671862 | 70671313 | ID=Msa0182250-mRNA-1:exon:23659;Parent=Msa0182250-mRNA-1 |
| chr1_4 | five_prime_UTR | 70671856 | 70671862 | 70671856 | ID=Msa0182250-mRNA-1:five_prime_utr;Parent=Msa0182250-mRNA-1 |
| chr1_4 | CDS | 70671313 | 70671855 | 70671313 | ID=Msa0182250-mRNA-1:cds;Parent=Msa0182250-mRNA-1 |
| chr1_4 | CDS | 70669970 | 70670662 | 70669970 | ID=Msa0182250-mRNA-1:cds;Parent=Msa0182250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
