Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043630 | sp|Q65XS5|BC10_ORYSJ | 34.194 | 310 | 152 | 9 | 125 | 387 | 85 | 389 | 8.12e-42 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043480 | Msa0043630 | 0.982061 | 3.937687e-154 | -8.615850e-47 |
| Msa0043630 | Msa0182200 | 0.990157 | 2.549506e-181 | -8.615850e-47 |
| Msa0043630 | Msa0182250 | 0.980156 | 1.426738e-149 | -8.615850e-47 |
| Msa0043630 | Msa0729350 | 0.803331 | 3.669054e-49 | -8.615850e-47 |
| Msa0043630 | Msa1224940 | 0.984423 | 1.615192e-160 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043630 | MtrunA17_Chr1g0209531 | 98.297 | 411 | 7 | 0 | 1 | 411 | 1 | 411 | 0.0 | 842 |
| Msa0043630 | MtrunA17_Chr5g0423131 | 68.542 | 391 | 120 | 2 | 5 | 393 | 1 | 390 | 0.0 | 564 |
| Msa0043630 | MtrunA17_Chr6g0484141 | 54.048 | 420 | 161 | 7 | 5 | 393 | 1 | 419 | 9.57e-159 | 454 |
| Msa0043630 | MtrunA17_Chr5g0394961 | 53.207 | 421 | 160 | 8 | 8 | 393 | 3 | 421 | 7.66e-150 | 431 |
| Msa0043630 | MtrunA17_Chr3g0136091 | 48.293 | 410 | 172 | 7 | 5 | 393 | 3 | 393 | 1.35e-130 | 381 |
| Msa0043630 | MtrunA17_Chr1g0151841 | 55.696 | 316 | 135 | 5 | 82 | 393 | 63 | 377 | 2.22e-130 | 380 |
| Msa0043630 | MtrunA17_Chr2g0276861 | 54.369 | 309 | 138 | 2 | 87 | 393 | 131 | 438 | 8.73e-122 | 360 |
| Msa0043630 | MtrunA17_Chr8g0341461 | 53.896 | 308 | 138 | 4 | 87 | 391 | 105 | 411 | 1.99e-117 | 348 |
| Msa0043630 | MtrunA17_Chr5g0394981 | 64.486 | 214 | 74 | 2 | 181 | 393 | 2 | 214 | 1.12e-97 | 290 |
| Msa0043630 | MtrunA17_Chr4g0073871 | 61.682 | 214 | 80 | 2 | 181 | 393 | 9 | 221 | 2.21e-91 | 275 |
| Msa0043630 | MtrunA17_Chr1g0148241 | 39.418 | 378 | 187 | 9 | 32 | 384 | 30 | 390 | 1.99e-77 | 245 |
| Msa0043630 | MtrunA17_Chr3g0138871 | 41.486 | 323 | 151 | 6 | 91 | 384 | 58 | 371 | 2.73e-74 | 236 |
| Msa0043630 | MtrunA17_Chr4g0071911 | 40.120 | 334 | 166 | 8 | 89 | 399 | 72 | 394 | 3.43e-72 | 231 |
| Msa0043630 | MtrunA17_Chr2g0298501 | 41.590 | 327 | 156 | 9 | 87 | 386 | 68 | 386 | 2.50e-69 | 224 |
| Msa0043630 | MtrunA17_Chr2g0298511 | 41.754 | 285 | 140 | 6 | 124 | 386 | 97 | 377 | 1.18e-67 | 219 |
| Msa0043630 | MtrunA17_Chr2g0289021 | 36.593 | 317 | 157 | 9 | 109 | 384 | 46 | 359 | 7.88e-52 | 178 |
| Msa0043630 | MtrunA17_Chr8g0384601 | 35.714 | 308 | 149 | 9 | 124 | 387 | 55 | 357 | 1.92e-50 | 174 |
| Msa0043630 | MtrunA17_Chr1g0170231 | 34.483 | 319 | 178 | 8 | 95 | 391 | 33 | 342 | 6.21e-47 | 164 |
| Msa0043630 | MtrunA17_Chr3g0137661 | 36.102 | 313 | 183 | 8 | 92 | 391 | 66 | 374 | 1.02e-45 | 162 |
| Msa0043630 | MtrunA17_Chr4g0073881 | 42.995 | 207 | 84 | 6 | 8 | 181 | 3 | 208 | 1.12e-44 | 154 |
| Msa0043630 | MtrunA17_Chr1g0170151 | 35.897 | 312 | 172 | 9 | 99 | 391 | 39 | 341 | 1.51e-40 | 147 |
| Msa0043630 | MtrunA17_Chr2g0322161 | 35.333 | 300 | 149 | 12 | 125 | 391 | 78 | 365 | 3.81e-39 | 144 |
| Msa0043630 | MtrunA17_Chr5g0394971 | 62.791 | 86 | 31 | 1 | 97 | 181 | 1 | 86 | 6.75e-33 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043630 | AT1G68390.1 | 64.744 | 312 | 105 | 4 | 86 | 393 | 98 | 408 | 3.88e-149 | 429 |
| Msa0043630 | AT5G11730.1 | 56.958 | 309 | 130 | 3 | 87 | 393 | 79 | 386 | 6.59e-131 | 382 |
| Msa0043630 | AT3G21310.1 | 55.183 | 328 | 142 | 4 | 70 | 393 | 57 | 383 | 2.97e-129 | 377 |
| Msa0043630 | AT3G21310.3 | 55.183 | 328 | 142 | 4 | 70 | 393 | 57 | 383 | 2.97e-129 | 377 |
| Msa0043630 | AT1G68380.1 | 53.406 | 367 | 160 | 6 | 33 | 393 | 31 | 392 | 4.06e-129 | 377 |
| Msa0043630 | AT1G73810.1 | 51.351 | 407 | 173 | 8 | 8 | 393 | 16 | 418 | 3.63e-127 | 374 |
| Msa0043630 | AT5G25970.1 | 56.026 | 307 | 132 | 3 | 87 | 391 | 80 | 385 | 8.33e-126 | 369 |
| Msa0043630 | AT5G25970.2 | 56.026 | 307 | 132 | 3 | 87 | 391 | 80 | 385 | 8.33e-126 | 369 |
| Msa0043630 | AT5G25970.3 | 56.026 | 307 | 132 | 3 | 87 | 391 | 80 | 385 | 8.33e-126 | 369 |
| Msa0043630 | AT1G10880.1 | 59.107 | 291 | 116 | 3 | 99 | 388 | 93 | 381 | 1.25e-124 | 366 |
| Msa0043630 | AT1G10280.1 | 44.975 | 398 | 189 | 5 | 25 | 393 | 16 | 412 | 4.51e-123 | 363 |
| Msa0043630 | AT1G51770.1 | 53.012 | 332 | 147 | 5 | 70 | 393 | 62 | 392 | 3.34e-121 | 358 |
| Msa0043630 | AT5G16170.1 | 46.684 | 377 | 179 | 5 | 35 | 393 | 37 | 409 | 9.28e-117 | 347 |
| Msa0043630 | AT1G51770.2 | 48.193 | 332 | 136 | 6 | 70 | 393 | 62 | 365 | 3.27e-104 | 313 |
| Msa0043630 | AT4G31350.4 | 42.014 | 288 | 139 | 4 | 124 | 388 | 88 | 370 | 3.92e-74 | 236 |
| Msa0043630 | AT4G31350.1 | 42.014 | 288 | 139 | 4 | 124 | 388 | 88 | 370 | 3.92e-74 | 236 |
| Msa0043630 | AT4G31350.2 | 42.014 | 288 | 139 | 4 | 124 | 388 | 88 | 370 | 3.92e-74 | 236 |
| Msa0043630 | AT4G30060.2 | 39.394 | 330 | 160 | 7 | 86 | 386 | 71 | 389 | 1.86e-71 | 230 |
| Msa0043630 | AT4G30060.1 | 39.394 | 330 | 160 | 7 | 86 | 386 | 71 | 389 | 1.86e-71 | 230 |
| Msa0043630 | AT2G19160.2 | 39.024 | 328 | 168 | 8 | 86 | 388 | 68 | 388 | 2.46e-71 | 229 |
| Msa0043630 | AT2G19160.1 | 39.024 | 328 | 168 | 8 | 86 | 388 | 68 | 388 | 2.46e-71 | 229 |
| Msa0043630 | AT4G31350.3 | 40.000 | 285 | 144 | 3 | 124 | 388 | 88 | 365 | 1.67e-69 | 224 |
| Msa0043630 | AT4G25870.1 | 40.645 | 310 | 159 | 5 | 102 | 388 | 75 | 382 | 5.56e-69 | 223 |
| Msa0043630 | AT3G21310.2 | 54.359 | 195 | 86 | 2 | 70 | 261 | 57 | 251 | 3.30e-68 | 217 |
| Msa0043630 | AT5G57270.3 | 38.182 | 330 | 151 | 7 | 84 | 388 | 80 | 381 | 1.28e-65 | 214 |
| Msa0043630 | AT5G57270.1 | 38.182 | 330 | 151 | 7 | 84 | 388 | 80 | 381 | 1.28e-65 | 214 |
| Msa0043630 | AT5G57270.4 | 38.182 | 330 | 151 | 7 | 84 | 388 | 80 | 381 | 1.28e-65 | 214 |
| Msa0043630 | AT5G57270.5 | 38.182 | 330 | 151 | 7 | 84 | 388 | 80 | 381 | 1.28e-65 | 214 |
| Msa0043630 | AT5G57270.2 | 38.182 | 330 | 151 | 7 | 84 | 388 | 80 | 381 | 1.28e-65 | 214 |
| Msa0043630 | AT5G25330.1 | 33.773 | 379 | 214 | 13 | 30 | 391 | 1 | 359 | 3.09e-53 | 181 |
| Msa0043630 | AT1G62305.1 | 36.218 | 312 | 150 | 10 | 115 | 384 | 60 | 364 | 1.62e-49 | 172 |
| Msa0043630 | AT3G52060.1 | 34.194 | 310 | 178 | 10 | 99 | 391 | 43 | 343 | 3.85e-49 | 170 |
| Msa0043630 | AT5G14550.3 | 35.275 | 309 | 151 | 8 | 121 | 385 | 61 | 364 | 6.13e-49 | 170 |
| Msa0043630 | AT5G14550.1 | 35.161 | 310 | 152 | 8 | 120 | 385 | 60 | 364 | 8.10e-49 | 170 |
| Msa0043630 | AT5G14550.2 | 37.452 | 259 | 140 | 6 | 121 | 360 | 61 | 316 | 7.30e-48 | 167 |
| Msa0043630 | AT1G11940.1 | 37.075 | 294 | 138 | 9 | 124 | 375 | 73 | 361 | 1.25e-47 | 167 |
| Msa0043630 | AT1G62305.3 | 41.629 | 221 | 102 | 6 | 115 | 313 | 60 | 275 | 7.95e-45 | 158 |
| Msa0043630 | AT5G22070.1 | 33.136 | 338 | 169 | 14 | 95 | 391 | 38 | 359 | 1.09e-42 | 154 |
| Msa0043630 | AT1G11940.2 | 46.067 | 178 | 89 | 4 | 124 | 297 | 73 | 247 | 8.86e-42 | 149 |
| Msa0043630 | AT5G14550.4 | 35.862 | 290 | 148 | 10 | 121 | 385 | 61 | 337 | 6.47e-41 | 148 |
| Msa0043630 | AT4G32290.1 | 32.905 | 389 | 212 | 14 | 33 | 391 | 7 | 376 | 6.24e-37 | 139 |
| Msa0043630 | AT1G62305.2 | 32.692 | 312 | 137 | 10 | 115 | 384 | 60 | 340 | 9.50e-36 | 135 |
Find 64 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCACCTATCTCCTAATTT+TGG | 0.184517 | 1_1:-74892004 | Msa0043630:CDS |
| GATAGTAACTTATGTTTATT+AGG | 0.206271 | 1_1:+74890249 | None:intergenic |
| CATTCTAATCCTTCTTATAA+TGG | 0.257546 | 1_1:-74891622 | Msa0043630:CDS |
| TCATCCATATCATGCATAAT+TGG | 0.279929 | 1_1:+74891811 | None:intergenic |
| TCCTCCAATTATGCATGATA+TGG | 0.306477 | 1_1:-74891815 | Msa0043630:CDS |
| TTAAACCAAATACCAAAATT+AGG | 0.314110 | 1_1:+74891992 | None:intergenic |
| CTTTGGTTAGAATAAAGTTT+GGG | 0.319095 | 1_1:-74890518 | Msa0043630:CDS |
| GTTTATTAAGTAAGAATAGA+TGG | 0.333539 | 1_1:+74890770 | None:intergenic |
| CTCTGTCCATTTCAAACCAT+TGG | 0.344014 | 1_1:+74890637 | None:intergenic |
| TTGGGGAAGGAAATTCAAAT+AGG | 0.374868 | 1_1:-74890500 | Msa0043630:CDS |
| GGGAAACCTCGGGTAACATT+TGG | 0.376467 | 1_1:+74890682 | None:intergenic |
| GGTGACAAATGTTGTGTTCT+TGG | 0.377523 | 1_1:+74891889 | None:intergenic |
| CGTTCTTGTTTCACCGCAAT+CGG | 0.394209 | 1_1:+74891865 | None:intergenic |
| TGACTTGGGTTGACTGGTCA+AGG | 0.394569 | 1_1:-74890473 | Msa0043630:CDS |
| ACTTTGGTTAGAATAAAGTT+TGG | 0.400537 | 1_1:-74890519 | Msa0043630:CDS |
| TCTTTGATATAGAGATTGAT+TGG | 0.407880 | 1_1:+74892058 | None:intergenic |
| AAGAAATGCAAGTATAATAA+TGG | 0.408664 | 1_1:-74890381 | Msa0043630:CDS |
| AACTTTATTCTAACCAAAGT+TGG | 0.411378 | 1_1:+74890522 | None:intergenic |
| GAAGTTGAAGAGTGGTATGC+AGG | 0.429293 | 1_1:+74890797 | None:intergenic |
| AAATACCAAAATTAGGAGAT+AGG | 0.433518 | 1_1:+74891999 | None:intergenic |
| AGGGTCCCAATGGTTTGAAA+TGG | 0.440613 | 1_1:-74890643 | Msa0043630:CDS |
| TCTGTCCATTTCAAACCATT+GGG | 0.442280 | 1_1:+74890638 | None:intergenic |
| TATAATGCAGGAAGTTGAAT+GGG | 0.448864 | 1_1:-74890910 | Msa0043630:intron |
| AAGAGCTTTGACAAAGTACT+AGG | 0.449050 | 1_1:+74890315 | None:intergenic |
| GCTCTTGAAGATTGCGCCTA+AGG | 0.449626 | 1_1:-74890298 | Msa0043630:CDS |
| TCCCTCAACGAATGGAGAAA+AGG | 0.452596 | 1_1:-74890663 | Msa0043630:CDS |
| GGAGTTTGACTTGGGTTGAC+TGG | 0.465504 | 1_1:-74890479 | Msa0043630:CDS |
| AGGTGAGAAAATTAATAAAG+TGG | 0.465868 | 1_1:+74892019 | None:intergenic |
| TGAACATTACTTGCCAACTT+TGG | 0.466371 | 1_1:-74890535 | Msa0043630:CDS |
| GACTTGGGTTGACTGGTCAA+GGG | 0.470853 | 1_1:-74890472 | Msa0043630:CDS |
| CTGATATGAGAACAAATCGT+TGG | 0.474721 | 1_1:+74890823 | None:intergenic |
| TGGATGATGAAGAATTGTTA+TGG | 0.474924 | 1_1:-74891795 | Msa0043630:CDS |
| CCCTCAACGAATGGAGAAAA+GGG | 0.478730 | 1_1:-74890662 | Msa0043630:CDS |
| CTATAATGCAGGAAGTTGAA+TGG | 0.492949 | 1_1:-74890911 | Msa0043630:intron |
| ACAAGAACGTGTAGGATTGA+AGG | 0.500595 | 1_1:-74891851 | Msa0043630:CDS |
| TTGGTATTTGGTTTAACACT+TGG | 0.502163 | 1_1:-74891985 | Msa0043630:CDS |
| CGACCACGACCGACCGAGCT+AGG | 0.504404 | 1_1:+74890714 | None:intergenic |
| TTCAAATAGGAGTTTGACTT+GGG | 0.504505 | 1_1:-74890487 | Msa0043630:CDS |
| ATTCAAATAGGAGTTTGACT+TGG | 0.516231 | 1_1:-74890488 | Msa0043630:CDS |
| TGTTCAAACTGCATAACCTT+AGG | 0.519351 | 1_1:+74890282 | None:intergenic |
| GATCCTAGCTCGGTCGGTCG+TGG | 0.528787 | 1_1:-74890717 | Msa0043630:CDS |
| GTTAGAATAAAGTTTGGGGA+AGG | 0.530410 | 1_1:-74890513 | Msa0043630:CDS |
| ACTTGGGTTGACTGGTCAAG+GGG | 0.535261 | 1_1:-74890471 | Msa0043630:CDS |
| CCGAGGTTTCCCTCAACGAA+TGG | 0.536541 | 1_1:-74890671 | Msa0043630:CDS |
| CGGTAGAAGAATTCCCAGTA+AGG | 0.536710 | 1_1:-74891572 | Msa0043630:intron |
| GTCTTATGATGATCCTAGCT+CGG | 0.545878 | 1_1:-74890727 | Msa0043630:CDS |
| TGCAGTTTGAACACTACGAC+AGG | 0.553841 | 1_1:-74890272 | Msa0043630:CDS |
| TGGGTTGACTGGTCAAGGGG+TGG | 0.553874 | 1_1:-74890468 | Msa0043630:CDS |
| AGCAAACAGAAAACATGCAT+TGG | 0.562151 | 1_1:+74890350 | None:intergenic |
| TCCATATCATGCATAATTGG+AGG | 0.565222 | 1_1:+74891814 | None:intergenic |
| CCATTCGTTGAGGGAAACCT+CGG | 0.566873 | 1_1:+74890671 | None:intergenic |
| ATGGACAGAGAACTTGCTCT+AGG | 0.576538 | 1_1:-74890624 | Msa0043630:CDS |
| GGGTGTGATCCATTATAAGA+AGG | 0.577180 | 1_1:+74891613 | None:intergenic |
| ACATTTGTCACCGCCGATTG+CGG | 0.594351 | 1_1:-74891878 | Msa0043630:CDS |
| CATTCGTTGAGGGAAACCTC+GGG | 0.602596 | 1_1:+74890672 | None:intergenic |
| ATATCATGCATAATTGGAGG+AGG | 0.604452 | 1_1:+74891817 | None:intergenic |
| ATGGTTGAGAAGTTGAAGAG+TGG | 0.604831 | 1_1:+74890789 | None:intergenic |
| TCTTGTTTCACCGCAATCGG+CGG | 0.617064 | 1_1:+74891868 | None:intergenic |
| AATGGAGAAAAGGGTCCCAA+TGG | 0.634468 | 1_1:-74890653 | Msa0043630:CDS |
| TTTGGTTAGAATAAAGTTTG+GGG | 0.642533 | 1_1:-74890517 | Msa0043630:CDS |
| TAGCATCCAAATGTTACCCG+AGG | 0.647404 | 1_1:-74890688 | Msa0043630:CDS |
| TATGATGATCCTAGCTCGGT+CGG | 0.674006 | 1_1:-74890723 | Msa0043630:CDS |
| ATAATGCAGGAAGTTGAATG+GGG | 0.703755 | 1_1:-74890909 | Msa0043630:intron |
| GCGGTGAAACAAGAACGTGT+AGG | 0.726920 | 1_1:-74891859 | Msa0043630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATGTTACATTTTAATTTT+TGG | - | chr1_1:74890814-74890833 | Msa0043630:CDS | 10.0% |
| !!! | ATATGTTACATTTTAATTTT+TGG | - | chr1_1:74890814-74890833 | Msa0043630:CDS | 10.0% |
| !! | TATTATGACAGAAAAAATGA+AGG | - | chr1_1:74890233-74890252 | Msa0043630:CDS | 20.0% |
| !! | ATTATGACAGAAAAAATGAA+GGG | - | chr1_1:74890234-74890253 | Msa0043630:CDS | 20.0% |
| !! | TTAAACCAAATACCAAAATT+AGG | + | chr1_1:74890341-74890360 | None:intergenic | 20.0% |
| !! | ATTGAAAAATGATTATTGCT+TGG | - | chr1_1:74890864-74890883 | Msa0043630:CDS | 20.0% |
| !!! | ATTGTGAACTTTTAACAAAA+TGG | - | chr1_1:74891130-74891149 | Msa0043630:intron | 20.0% |
| !! | GTTTATTAAGTAAGAATAGA+TGG | + | chr1_1:74891563-74891582 | None:intergenic | 20.0% |
| !!! | TGATGTTAATGTTAAGTTTT+TGG | - | chr1_1:74891912-74891931 | Msa0043630:CDS | 20.0% |
| !! | AAGAAATGCAAGTATAATAA+TGG | - | chr1_1:74891949-74891968 | Msa0043630:CDS | 20.0% |
| !! | GATAGTAACTTATGTTTATT+AGG | + | chr1_1:74892084-74892103 | None:intergenic | 20.0% |
| !! | TATTATGACAGAAAAAATGA+AGG | - | chr1_1:74890233-74890252 | Msa0043630:CDS | 20.0% |
| !! | ATTATGACAGAAAAAATGAA+GGG | - | chr1_1:74890234-74890253 | Msa0043630:CDS | 20.0% |
| !! | TTAAACCAAATACCAAAATT+AGG | + | chr1_1:74890341-74890360 | None:intergenic | 20.0% |
| !! | ATTGAAAAATGATTATTGCT+TGG | - | chr1_1:74890864-74890883 | Msa0043630:CDS | 20.0% |
| !!! | ATTGTGAACTTTTAACAAAA+TGG | - | chr1_1:74891130-74891149 | Msa0043630:intron | 20.0% |
| !! | GTTTATTAAGTAAGAATAGA+TGG | + | chr1_1:74891563-74891582 | None:intergenic | 20.0% |
| !!! | TGATGTTAATGTTAAGTTTT+TGG | - | chr1_1:74891912-74891931 | Msa0043630:CDS | 20.0% |
| !! | AAGAAATGCAAGTATAATAA+TGG | - | chr1_1:74891949-74891968 | Msa0043630:CDS | 20.0% |
| !! | GATAGTAACTTATGTTTATT+AGG | + | chr1_1:74892084-74892103 | None:intergenic | 20.0% |
| ! | TCTTTGATATAGAGATTGAT+TGG | + | chr1_1:74890275-74890294 | None:intergenic | 25.0% |
| ! | AGGTGAGAAAATTAATAAAG+TGG | + | chr1_1:74890314-74890333 | None:intergenic | 25.0% |
| ! | AAATACCAAAATTAGGAGAT+AGG | + | chr1_1:74890334-74890353 | None:intergenic | 25.0% |
| !!! | TATCTCCTAATTTTGGTATT+TGG | - | chr1_1:74890333-74890352 | Msa0043630:CDS | 25.0% |
| !! | AAAAACATGAATGCAACTTT+TGG | + | chr1_1:74890609-74890628 | None:intergenic | 25.0% |
| ! | CATTCTAATCCTTCTTATAA+TGG | - | chr1_1:74890708-74890727 | Msa0043630:CDS | 25.0% |
| ! | TTGCTTGGATTTAATTCAAA+TGG | - | chr1_1:74890879-74890898 | Msa0043630:CDS | 25.0% |
| !!! | TTTTAGCTAGAATGATGATA+TGG | - | chr1_1:74891076-74891095 | Msa0043630:intron | 25.0% |
| !! | CTTTTAACAAAATGGTACTA+TGG | - | chr1_1:74891138-74891157 | Msa0043630:intron | 25.0% |
| !!! | AAATAAACAGTGATGGATAT+TGG | - | chr1_1:74891383-74891402 | Msa0043630:intron | 25.0% |
| ! | TTGCAATATTCTTGAAAAAC+TGG | + | chr1_1:74891757-74891776 | None:intergenic | 25.0% |
| !!! | GTTTTTCAAGAATATTGCAA+AGG | - | chr1_1:74891757-74891776 | Msa0043630:CDS | 25.0% |
| ! | AACTTTATTCTAACCAAAGT+TGG | + | chr1_1:74891811-74891830 | None:intergenic | 25.0% |
| ! | ACTTTGGTTAGAATAAAGTT+TGG | - | chr1_1:74891811-74891830 | Msa0043630:CDS | 25.0% |
| ! | CTTTGGTTAGAATAAAGTTT+GGG | - | chr1_1:74891812-74891831 | Msa0043630:CDS | 25.0% |
| ! | TTTGGTTAGAATAAAGTTTG+GGG | - | chr1_1:74891813-74891832 | Msa0043630:CDS | 25.0% |
| !!! | TTAAGTTTTTGGAGAGATTA+AGG | - | chr1_1:74891923-74891942 | Msa0043630:CDS | 25.0% |
| ! | TCTTTGATATAGAGATTGAT+TGG | + | chr1_1:74890275-74890294 | None:intergenic | 25.0% |
| ! | AGGTGAGAAAATTAATAAAG+TGG | + | chr1_1:74890314-74890333 | None:intergenic | 25.0% |
| ! | AAATACCAAAATTAGGAGAT+AGG | + | chr1_1:74890334-74890353 | None:intergenic | 25.0% |
| !!! | TATCTCCTAATTTTGGTATT+TGG | - | chr1_1:74890333-74890352 | Msa0043630:CDS | 25.0% |
| !! | AAAAACATGAATGCAACTTT+TGG | + | chr1_1:74890609-74890628 | None:intergenic | 25.0% |
| ! | CATTCTAATCCTTCTTATAA+TGG | - | chr1_1:74890708-74890727 | Msa0043630:CDS | 25.0% |
| ! | TTGCTTGGATTTAATTCAAA+TGG | - | chr1_1:74890879-74890898 | Msa0043630:CDS | 25.0% |
| !!! | TTTTAGCTAGAATGATGATA+TGG | - | chr1_1:74891076-74891095 | Msa0043630:intron | 25.0% |
| !! | CTTTTAACAAAATGGTACTA+TGG | - | chr1_1:74891138-74891157 | Msa0043630:intron | 25.0% |
| !!! | AAATAAACAGTGATGGATAT+TGG | - | chr1_1:74891383-74891402 | Msa0043630:intron | 25.0% |
| ! | TTGCAATATTCTTGAAAAAC+TGG | + | chr1_1:74891757-74891776 | None:intergenic | 25.0% |
| !!! | GTTTTTCAAGAATATTGCAA+AGG | - | chr1_1:74891757-74891776 | Msa0043630:CDS | 25.0% |
| ! | AACTTTATTCTAACCAAAGT+TGG | + | chr1_1:74891811-74891830 | None:intergenic | 25.0% |
| ! | ACTTTGGTTAGAATAAAGTT+TGG | - | chr1_1:74891811-74891830 | Msa0043630:CDS | 25.0% |
| ! | CTTTGGTTAGAATAAAGTTT+GGG | - | chr1_1:74891812-74891831 | Msa0043630:CDS | 25.0% |
| ! | TTTGGTTAGAATAAAGTTTG+GGG | - | chr1_1:74891813-74891832 | Msa0043630:CDS | 25.0% |
| !!! | TTAAGTTTTTGGAGAGATTA+AGG | - | chr1_1:74891923-74891942 | Msa0043630:CDS | 25.0% |
| ! | TTGGTATTTGGTTTAACACT+TGG | - | chr1_1:74890345-74890364 | Msa0043630:CDS | 30.0% |
| TCATCCATATCATGCATAAT+TGG | + | chr1_1:74890522-74890541 | None:intergenic | 30.0% | |
| TGGATGATGAAGAATTGTTA+TGG | - | chr1_1:74890535-74890554 | Msa0043630:CDS | 30.0% | |
| !! | TTGCATTCATGTTTTTGACA+AGG | - | chr1_1:74890613-74890632 | Msa0043630:CDS | 30.0% |
| !! | TGCATTCATGTTTTTGACAA+GGG | - | chr1_1:74890614-74890633 | Msa0043630:CDS | 30.0% |
| !! | AGTTTTTCAAAGGTCATGAA+GGG | - | chr1_1:74890667-74890686 | Msa0043630:CDS | 30.0% |
| AAAAACTAACTGACCTTACT+GGG | + | chr1_1:74890774-74890793 | None:intergenic | 30.0% | |
| AAAAAACTAACTGACCTTAC+TGG | + | chr1_1:74890775-74890794 | None:intergenic | 30.0% | |
| CAGATTAAGACAATAGAGAA+TGG | + | chr1_1:74890841-74890860 | None:intergenic | 30.0% | |
| ! | ATATAACAAGACTTTTGCAC+AGG | + | chr1_1:74890924-74890943 | None:intergenic | 30.0% |
| ! | ATGCATACTTGTTTCTTTGT+AGG | - | chr1_1:74891322-74891341 | Msa0043630:intron | 30.0% |
| TCTCTGTTGTAATAAGTTAC+TGG | + | chr1_1:74891364-74891383 | None:intergenic | 30.0% | |
| AACAGAGAAATAAACAGTGA+TGG | - | chr1_1:74891376-74891395 | Msa0043630:intron | 30.0% | |
| TATAATGCAGGAAGTTGAAT+GGG | - | chr1_1:74891420-74891439 | Msa0043630:intron | 30.0% | |
| ATTCAAATAGGAGTTTGACT+TGG | - | chr1_1:74891842-74891861 | Msa0043630:CDS | 30.0% | |
| ! | TTCAAATAGGAGTTTGACTT+GGG | - | chr1_1:74891843-74891862 | Msa0043630:CDS | 30.0% |
| ! | TTGGTATTTGGTTTAACACT+TGG | - | chr1_1:74890345-74890364 | Msa0043630:CDS | 30.0% |
| TCATCCATATCATGCATAAT+TGG | + | chr1_1:74890522-74890541 | None:intergenic | 30.0% | |
| TGGATGATGAAGAATTGTTA+TGG | - | chr1_1:74890535-74890554 | Msa0043630:CDS | 30.0% | |
| !! | TTGCATTCATGTTTTTGACA+AGG | - | chr1_1:74890613-74890632 | Msa0043630:CDS | 30.0% |
| !! | TGCATTCATGTTTTTGACAA+GGG | - | chr1_1:74890614-74890633 | Msa0043630:CDS | 30.0% |
| !! | AGTTTTTCAAAGGTCATGAA+GGG | - | chr1_1:74890667-74890686 | Msa0043630:CDS | 30.0% |
| AAAAACTAACTGACCTTACT+GGG | + | chr1_1:74890774-74890793 | None:intergenic | 30.0% | |
| AAAAAACTAACTGACCTTAC+TGG | + | chr1_1:74890775-74890794 | None:intergenic | 30.0% | |
| CAGATTAAGACAATAGAGAA+TGG | + | chr1_1:74890841-74890860 | None:intergenic | 30.0% | |
| ! | ATATAACAAGACTTTTGCAC+AGG | + | chr1_1:74890924-74890943 | None:intergenic | 30.0% |
| ! | ATGCATACTTGTTTCTTTGT+AGG | - | chr1_1:74891322-74891341 | Msa0043630:intron | 30.0% |
| TCTCTGTTGTAATAAGTTAC+TGG | + | chr1_1:74891364-74891383 | None:intergenic | 30.0% | |
| AACAGAGAAATAAACAGTGA+TGG | - | chr1_1:74891376-74891395 | Msa0043630:intron | 30.0% | |
| TATAATGCAGGAAGTTGAAT+GGG | - | chr1_1:74891420-74891439 | Msa0043630:intron | 30.0% | |
| ATTCAAATAGGAGTTTGACT+TGG | - | chr1_1:74891842-74891861 | Msa0043630:CDS | 30.0% | |
| ! | TTCAAATAGGAGTTTGACTT+GGG | - | chr1_1:74891843-74891862 | Msa0043630:CDS | 30.0% |
| ! | TCTCACCTATCTCCTAATTT+TGG | - | chr1_1:74890326-74890345 | Msa0043630:CDS | 35.0% |
| ATATCATGCATAATTGGAGG+AGG | + | chr1_1:74890516-74890535 | None:intergenic | 35.0% | |
| TCCTCCAATTATGCATGATA+TGG | - | chr1_1:74890515-74890534 | Msa0043630:CDS | 35.0% | |
| TCCATATCATGCATAATTGG+AGG | + | chr1_1:74890519-74890538 | None:intergenic | 35.0% | |
| !!! | CTTTTGGAACTCGTTCAAAA+GGG | + | chr1_1:74890593-74890612 | None:intergenic | 35.0% |
| !!! | ACTTTTGGAACTCGTTCAAA+AGG | + | chr1_1:74890594-74890613 | None:intergenic | 35.0% |
| !! | GCATTCATGTTTTTGACAAG+GGG | - | chr1_1:74890615-74890634 | Msa0043630:CDS | 35.0% |
| TTGAAAAACTGTTCCCACAA+AGG | + | chr1_1:74890657-74890676 | None:intergenic | 35.0% | |
| !! | TTGTGGGAACAGTTTTTCAA+AGG | - | chr1_1:74890657-74890676 | Msa0043630:CDS | 35.0% |
| !! | CAGTTTTTCAAAGGTCATGA+AGG | - | chr1_1:74890666-74890685 | Msa0043630:CDS | 35.0% |
| ATTCTTCTACCGTGAAAAAC+AGG | + | chr1_1:74890750-74890769 | None:intergenic | 35.0% | |
| AAGCCAAGTGAAGAGTAAAA+TGG | - | chr1_1:74890987-74891006 | Msa0043630:intron | 35.0% | |
| AGCCAAGTGAAGAGTAAAAT+GGG | - | chr1_1:74890988-74891007 | Msa0043630:intron | 35.0% | |
| CAAAATTGTCCAGTCAAACA+AGG | - | chr1_1:74891262-74891281 | Msa0043630:intron | 35.0% | |
| ! | ACTTTAAGTCCTTGTTTGAC+TGG | + | chr1_1:74891274-74891293 | None:intergenic | 35.0% |
| AACTAACCCTTCTATAATGC+AGG | - | chr1_1:74891408-74891427 | Msa0043630:intron | 35.0% | |
| CAACTTCCTGCATTATAGAA+GGG | + | chr1_1:74891417-74891436 | None:intergenic | 35.0% | |
| TCAACTTCCTGCATTATAGA+AGG | + | chr1_1:74891418-74891437 | None:intergenic | 35.0% | |
| CTATAATGCAGGAAGTTGAA+TGG | - | chr1_1:74891419-74891438 | Msa0043630:intron | 35.0% | |
| ATAATGCAGGAAGTTGAATG+GGG | - | chr1_1:74891421-74891440 | Msa0043630:intron | 35.0% | |
| CTGATATGAGAACAAATCGT+TGG | + | chr1_1:74891510-74891529 | None:intergenic | 35.0% | |
| TCTGTCCATTTCAAACCATT+GGG | + | chr1_1:74891695-74891714 | None:intergenic | 35.0% | |
| TGAACATTACTTGCCAACTT+TGG | - | chr1_1:74891795-74891814 | Msa0043630:CDS | 35.0% | |
| GTTAGAATAAAGTTTGGGGA+AGG | - | chr1_1:74891817-74891836 | Msa0043630:CDS | 35.0% | |
| TTGGGGAAGGAAATTCAAAT+AGG | - | chr1_1:74891830-74891849 | Msa0043630:CDS | 35.0% | |
| TCAGATCTCAAAAAATGAGC+TGG | + | chr1_1:74891895-74891914 | None:intergenic | 35.0% | |
| AGCAAACAGAAAACATGCAT+TGG | + | chr1_1:74891983-74892002 | None:intergenic | 35.0% | |
| ! | ATGCATGTTTTCTGTTTGCT+AGG | - | chr1_1:74891983-74892002 | Msa0043630:CDS | 35.0% |
| ! | AAGAGCTTTGACAAAGTACT+AGG | + | chr1_1:74892018-74892037 | None:intergenic | 35.0% |
| TGTTCAAACTGCATAACCTT+AGG | + | chr1_1:74892051-74892070 | None:intergenic | 35.0% | |
| ! | TCTCACCTATCTCCTAATTT+TGG | - | chr1_1:74890326-74890345 | Msa0043630:CDS | 35.0% |
| ATATCATGCATAATTGGAGG+AGG | + | chr1_1:74890516-74890535 | None:intergenic | 35.0% | |
| TCCTCCAATTATGCATGATA+TGG | - | chr1_1:74890515-74890534 | Msa0043630:CDS | 35.0% | |
| TCCATATCATGCATAATTGG+AGG | + | chr1_1:74890519-74890538 | None:intergenic | 35.0% | |
| !!! | CTTTTGGAACTCGTTCAAAA+GGG | + | chr1_1:74890593-74890612 | None:intergenic | 35.0% |
| !!! | ACTTTTGGAACTCGTTCAAA+AGG | + | chr1_1:74890594-74890613 | None:intergenic | 35.0% |
| !! | GCATTCATGTTTTTGACAAG+GGG | - | chr1_1:74890615-74890634 | Msa0043630:CDS | 35.0% |
| TTGAAAAACTGTTCCCACAA+AGG | + | chr1_1:74890657-74890676 | None:intergenic | 35.0% | |
| !! | TTGTGGGAACAGTTTTTCAA+AGG | - | chr1_1:74890657-74890676 | Msa0043630:CDS | 35.0% |
| !! | CAGTTTTTCAAAGGTCATGA+AGG | - | chr1_1:74890666-74890685 | Msa0043630:CDS | 35.0% |
| ATTCTTCTACCGTGAAAAAC+AGG | + | chr1_1:74890750-74890769 | None:intergenic | 35.0% | |
| AAGCCAAGTGAAGAGTAAAA+TGG | - | chr1_1:74890987-74891006 | Msa0043630:intron | 35.0% | |
| AGCCAAGTGAAGAGTAAAAT+GGG | - | chr1_1:74890988-74891007 | Msa0043630:intron | 35.0% | |
| CAAAATTGTCCAGTCAAACA+AGG | - | chr1_1:74891262-74891281 | Msa0043630:intron | 35.0% | |
| ! | ACTTTAAGTCCTTGTTTGAC+TGG | + | chr1_1:74891274-74891293 | None:intergenic | 35.0% |
| AACTAACCCTTCTATAATGC+AGG | - | chr1_1:74891408-74891427 | Msa0043630:intron | 35.0% | |
| CAACTTCCTGCATTATAGAA+GGG | + | chr1_1:74891417-74891436 | None:intergenic | 35.0% | |
| TCAACTTCCTGCATTATAGA+AGG | + | chr1_1:74891418-74891437 | None:intergenic | 35.0% | |
| CTATAATGCAGGAAGTTGAA+TGG | - | chr1_1:74891419-74891438 | Msa0043630:intron | 35.0% | |
| ATAATGCAGGAAGTTGAATG+GGG | - | chr1_1:74891421-74891440 | Msa0043630:intron | 35.0% | |
| CTGATATGAGAACAAATCGT+TGG | + | chr1_1:74891510-74891529 | None:intergenic | 35.0% | |
| TCTGTCCATTTCAAACCATT+GGG | + | chr1_1:74891695-74891714 | None:intergenic | 35.0% | |
| TGAACATTACTTGCCAACTT+TGG | - | chr1_1:74891795-74891814 | Msa0043630:CDS | 35.0% | |
| GTTAGAATAAAGTTTGGGGA+AGG | - | chr1_1:74891817-74891836 | Msa0043630:CDS | 35.0% | |
| TTGGGGAAGGAAATTCAAAT+AGG | - | chr1_1:74891830-74891849 | Msa0043630:CDS | 35.0% | |
| TCAGATCTCAAAAAATGAGC+TGG | + | chr1_1:74891895-74891914 | None:intergenic | 35.0% | |
| AGCAAACAGAAAACATGCAT+TGG | + | chr1_1:74891983-74892002 | None:intergenic | 35.0% | |
| ! | ATGCATGTTTTCTGTTTGCT+AGG | - | chr1_1:74891983-74892002 | Msa0043630:CDS | 35.0% |
| ! | AAGAGCTTTGACAAAGTACT+AGG | + | chr1_1:74892018-74892037 | None:intergenic | 35.0% |
| TGTTCAAACTGCATAACCTT+AGG | + | chr1_1:74892051-74892070 | None:intergenic | 35.0% | |
| GGTGACAAATGTTGTGTTCT+TGG | + | chr1_1:74890444-74890463 | None:intergenic | 40.0% | |
| ACAAGAACGTGTAGGATTGA+AGG | - | chr1_1:74890479-74890498 | Msa0043630:CDS | 40.0% | |
| !!! | TGTGTTTTTGGCACCTTTGT+GGG | - | chr1_1:74890641-74890660 | Msa0043630:CDS | 40.0% |
| GGGTGTGATCCATTATAAGA+AGG | + | chr1_1:74890720-74890739 | None:intergenic | 40.0% | |
| GCCAAGTGAAGAGTAAAATG+GGG | - | chr1_1:74890989-74891008 | Msa0043630:intron | 40.0% | |
| ! | TCCCCATTTTACTCTTCACT+TGG | + | chr1_1:74890993-74891012 | None:intergenic | 40.0% |
| GTGAAGAGTAAAATGGGGAA+AGG | - | chr1_1:74890994-74891013 | Msa0043630:intron | 40.0% | |
| ATGGTTGAGAAGTTGAAGAG+TGG | + | chr1_1:74891544-74891563 | None:intergenic | 40.0% | |
| GTCTTATGATGATCCTAGCT+CGG | - | chr1_1:74891603-74891622 | Msa0043630:CDS | 40.0% | |
| CTCTGTCCATTTCAAACCAT+TGG | + | chr1_1:74891696-74891715 | None:intergenic | 40.0% | |
| CTCAAAAAATGAGCTGGATG+TGG | + | chr1_1:74891889-74891908 | None:intergenic | 40.0% | |
| GGTGACAAATGTTGTGTTCT+TGG | + | chr1_1:74890444-74890463 | None:intergenic | 40.0% | |
| ACAAGAACGTGTAGGATTGA+AGG | - | chr1_1:74890479-74890498 | Msa0043630:CDS | 40.0% | |
| !!! | TGTGTTTTTGGCACCTTTGT+GGG | - | chr1_1:74890641-74890660 | Msa0043630:CDS | 40.0% |
| GGGTGTGATCCATTATAAGA+AGG | + | chr1_1:74890720-74890739 | None:intergenic | 40.0% | |
| GCCAAGTGAAGAGTAAAATG+GGG | - | chr1_1:74890989-74891008 | Msa0043630:intron | 40.0% | |
| ! | TCCCCATTTTACTCTTCACT+TGG | + | chr1_1:74890993-74891012 | None:intergenic | 40.0% |
| GTGAAGAGTAAAATGGGGAA+AGG | - | chr1_1:74890994-74891013 | Msa0043630:intron | 40.0% | |
| ATGGTTGAGAAGTTGAAGAG+TGG | + | chr1_1:74891544-74891563 | None:intergenic | 40.0% | |
| GTCTTATGATGATCCTAGCT+CGG | - | chr1_1:74891603-74891622 | Msa0043630:CDS | 40.0% | |
| CTCTGTCCATTTCAAACCAT+TGG | + | chr1_1:74891696-74891715 | None:intergenic | 40.0% | |
| CTCAAAAAATGAGCTGGATG+TGG | + | chr1_1:74891889-74891908 | None:intergenic | 40.0% | |
| ! | CGTTCTTGTTTCACCGCAAT+CGG | + | chr1_1:74890468-74890487 | None:intergenic | 45.0% |
| !!! | CTGTGTTTTTGGCACCTTTG+TGG | - | chr1_1:74890640-74890659 | Msa0043630:CDS | 45.0% |
| CGTGAAAAACAGGACTCTCA+GGG | + | chr1_1:74890740-74890759 | None:intergenic | 45.0% | |
| !! | CCTGAGAGTCCTGTTTTTCA+CGG | - | chr1_1:74890738-74890757 | Msa0043630:CDS | 45.0% |
| CGGTAGAAGAATTCCCAGTA+AGG | - | chr1_1:74890758-74890777 | Msa0043630:CDS | 45.0% | |
| GAAGTTGAAGAGTGGTATGC+AGG | + | chr1_1:74891536-74891555 | None:intergenic | 45.0% | |
| TATGATGATCCTAGCTCGGT+CGG | - | chr1_1:74891607-74891626 | Msa0043630:CDS | 45.0% | |
| TAGCATCCAAATGTTACCCG+AGG | - | chr1_1:74891642-74891661 | Msa0043630:CDS | 45.0% | |
| TCCCTCAACGAATGGAGAAA+AGG | - | chr1_1:74891667-74891686 | Msa0043630:CDS | 45.0% | |
| ! | CCCTTTTCTCCATTCGTTGA+GGG | + | chr1_1:74891671-74891690 | None:intergenic | 45.0% |
| CCCTCAACGAATGGAGAAAA+GGG | - | chr1_1:74891668-74891687 | Msa0043630:CDS | 45.0% | |
| ! | ACCCTTTTCTCCATTCGTTG+AGG | + | chr1_1:74891672-74891691 | None:intergenic | 45.0% |
| AATGGAGAAAAGGGTCCCAA+TGG | - | chr1_1:74891677-74891696 | Msa0043630:CDS | 45.0% | |
| AGGGTCCCAATGGTTTGAAA+TGG | - | chr1_1:74891687-74891706 | Msa0043630:CDS | 45.0% | |
| ! | ATGGACAGAGAACTTGCTCT+AGG | - | chr1_1:74891706-74891725 | Msa0043630:CDS | 45.0% |
| TGCAGTTTGAACACTACGAC+AGG | - | chr1_1:74892058-74892077 | Msa0043630:CDS | 45.0% | |
| ! | CGTTCTTGTTTCACCGCAAT+CGG | + | chr1_1:74890468-74890487 | None:intergenic | 45.0% |
| !!! | CTGTGTTTTTGGCACCTTTG+TGG | - | chr1_1:74890640-74890659 | Msa0043630:CDS | 45.0% |
| CGTGAAAAACAGGACTCTCA+GGG | + | chr1_1:74890740-74890759 | None:intergenic | 45.0% | |
| !! | CCTGAGAGTCCTGTTTTTCA+CGG | - | chr1_1:74890738-74890757 | Msa0043630:CDS | 45.0% |
| CGGTAGAAGAATTCCCAGTA+AGG | - | chr1_1:74890758-74890777 | Msa0043630:CDS | 45.0% | |
| GAAGTTGAAGAGTGGTATGC+AGG | + | chr1_1:74891536-74891555 | None:intergenic | 45.0% | |
| TATGATGATCCTAGCTCGGT+CGG | - | chr1_1:74891607-74891626 | Msa0043630:CDS | 45.0% | |
| TAGCATCCAAATGTTACCCG+AGG | - | chr1_1:74891642-74891661 | Msa0043630:CDS | 45.0% | |
| TCCCTCAACGAATGGAGAAA+AGG | - | chr1_1:74891667-74891686 | Msa0043630:CDS | 45.0% | |
| ! | CCCTTTTCTCCATTCGTTGA+GGG | + | chr1_1:74891671-74891690 | None:intergenic | 45.0% |
| CCCTCAACGAATGGAGAAAA+GGG | - | chr1_1:74891668-74891687 | Msa0043630:CDS | 45.0% | |
| ! | ACCCTTTTCTCCATTCGTTG+AGG | + | chr1_1:74891672-74891691 | None:intergenic | 45.0% |
| AATGGAGAAAAGGGTCCCAA+TGG | - | chr1_1:74891677-74891696 | Msa0043630:CDS | 45.0% | |
| AGGGTCCCAATGGTTTGAAA+TGG | - | chr1_1:74891687-74891706 | Msa0043630:CDS | 45.0% | |
| ! | ATGGACAGAGAACTTGCTCT+AGG | - | chr1_1:74891706-74891725 | Msa0043630:CDS | 45.0% |
| TGCAGTTTGAACACTACGAC+AGG | - | chr1_1:74892058-74892077 | Msa0043630:CDS | 45.0% | |
| ! | ACATTTGTCACCGCCGATTG+CGG | - | chr1_1:74890452-74890471 | Msa0043630:CDS | 50.0% |
| ! | TCTTGTTTCACCGCAATCGG+CGG | + | chr1_1:74890465-74890484 | None:intergenic | 50.0% |
| GCGGTGAAACAAGAACGTGT+AGG | - | chr1_1:74890471-74890490 | Msa0043630:CDS | 50.0% | |
| !!! | GACAAGGGGTGCTGTGTTTT+TGG | - | chr1_1:74890629-74890648 | Msa0043630:CDS | 50.0% |
| CCGTGAAAAACAGGACTCTC+AGG | + | chr1_1:74890741-74890760 | None:intergenic | 50.0% | |
| GGGAAACCTCGGGTAACATT+TGG | + | chr1_1:74891651-74891670 | None:intergenic | 50.0% | |
| CATTCGTTGAGGGAAACCTC+GGG | + | chr1_1:74891661-74891680 | None:intergenic | 50.0% | |
| CCATTCGTTGAGGGAAACCT+CGG | + | chr1_1:74891662-74891681 | None:intergenic | 50.0% | |
| !! | GGAGTTTGACTTGGGTTGAC+TGG | - | chr1_1:74891851-74891870 | Msa0043630:CDS | 50.0% |
| !! | TGACTTGGGTTGACTGGTCA+AGG | - | chr1_1:74891857-74891876 | Msa0043630:CDS | 50.0% |
| !! | GACTTGGGTTGACTGGTCAA+GGG | - | chr1_1:74891858-74891877 | Msa0043630:CDS | 50.0% |
| !! | ACTTGGGTTGACTGGTCAAG+GGG | - | chr1_1:74891859-74891878 | Msa0043630:CDS | 50.0% |
| GCTCTTGAAGATTGCGCCTA+AGG | - | chr1_1:74892032-74892051 | Msa0043630:CDS | 50.0% | |
| ! | ACATTTGTCACCGCCGATTG+CGG | - | chr1_1:74890452-74890471 | Msa0043630:CDS | 50.0% |
| ! | TCTTGTTTCACCGCAATCGG+CGG | + | chr1_1:74890465-74890484 | None:intergenic | 50.0% |
| GCGGTGAAACAAGAACGTGT+AGG | - | chr1_1:74890471-74890490 | Msa0043630:CDS | 50.0% | |
| !!! | GACAAGGGGTGCTGTGTTTT+TGG | - | chr1_1:74890629-74890648 | Msa0043630:CDS | 50.0% |
| CCGTGAAAAACAGGACTCTC+AGG | + | chr1_1:74890741-74890760 | None:intergenic | 50.0% | |
| GGGAAACCTCGGGTAACATT+TGG | + | chr1_1:74891651-74891670 | None:intergenic | 50.0% | |
| CATTCGTTGAGGGAAACCTC+GGG | + | chr1_1:74891661-74891680 | None:intergenic | 50.0% | |
| CCATTCGTTGAGGGAAACCT+CGG | + | chr1_1:74891662-74891681 | None:intergenic | 50.0% | |
| !! | GGAGTTTGACTTGGGTTGAC+TGG | - | chr1_1:74891851-74891870 | Msa0043630:CDS | 50.0% |
| !! | TGACTTGGGTTGACTGGTCA+AGG | - | chr1_1:74891857-74891876 | Msa0043630:CDS | 50.0% |
| !! | GACTTGGGTTGACTGGTCAA+GGG | - | chr1_1:74891858-74891877 | Msa0043630:CDS | 50.0% |
| !! | ACTTGGGTTGACTGGTCAAG+GGG | - | chr1_1:74891859-74891878 | Msa0043630:CDS | 50.0% |
| GCTCTTGAAGATTGCGCCTA+AGG | - | chr1_1:74892032-74892051 | Msa0043630:CDS | 50.0% | |
| CCGAGGTTTCCCTCAACGAA+TGG | - | chr1_1:74891659-74891678 | Msa0043630:CDS | 55.0% | |
| CCGAGGTTTCCCTCAACGAA+TGG | - | chr1_1:74891659-74891678 | Msa0043630:CDS | 55.0% | |
| ! | TGGGTTGACTGGTCAAGGGG+TGG | - | chr1_1:74891862-74891881 | Msa0043630:CDS | 60.0% |
| ! | TGGGTTGACTGGTCAAGGGG+TGG | - | chr1_1:74891862-74891881 | Msa0043630:CDS | 60.0% |
| GATCCTAGCTCGGTCGGTCG+TGG | - | chr1_1:74891613-74891632 | Msa0043630:CDS | 65.0% | |
| GATCCTAGCTCGGTCGGTCG+TGG | - | chr1_1:74891613-74891632 | Msa0043630:CDS | 65.0% | |
| CGACCACGACCGACCGAGCT+AGG | + | chr1_1:74891619-74891638 | None:intergenic | 70.0% | |
| CGACCACGACCGACCGAGCT+AGG | + | chr1_1:74891619-74891638 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 74890230 | 74892122 | 74890230 | ID=Msa0043630;Name=Msa0043630 |
| chr1_1 | mRNA | 74890230 | 74892122 | 74890230 | ID=Msa0043630-mRNA-1;Parent=Msa0043630;Name=Msa0043630-mRNA-1;_AED=0.05;_eAED=0.05;_QI=7|1|0.5|1|1|1|2|0|411 |
| chr1_1 | exon | 74890230 | 74890922 | 74890230 | ID=Msa0043630-mRNA-1:exon:25291;Parent=Msa0043630-mRNA-1 |
| chr1_1 | exon | 74891573 | 74892122 | 74891573 | ID=Msa0043630-mRNA-1:exon:25290;Parent=Msa0043630-mRNA-1 |
| chr1_1 | five_prime_UTR | 74892116 | 74892122 | 74892116 | ID=Msa0043630-mRNA-1:five_prime_utr;Parent=Msa0043630-mRNA-1 |
| chr1_1 | CDS | 74891573 | 74892115 | 74891573 | ID=Msa0043630-mRNA-1:cds;Parent=Msa0043630-mRNA-1 |
| chr1_1 | CDS | 74890230 | 74890922 | 74890230 | ID=Msa0043630-mRNA-1:cds;Parent=Msa0043630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
