AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0183250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183250 MtrunA17_Chr1g0211341 99.888 895 1 0 1 895 1 895 0.0 1839
Msa0183250 MtrunA17_Chr8g0388661 21.550 826 488 35 28 774 12 756 4.81e-22 102
Msa0183250 MtrunA17_Chr3g0127121 21.566 779 465 31 68 774 51 755 3.11e-20 96.7
Msa0183250 MtrunA17_Chr3g0127101 22.074 598 371 20 68 612 51 606 1.21e-18 91.7
Msa0183250 MtrunA17_Chr2g0277681 20.896 536 342 13 36 554 20 490 4.53e-17 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183250 AT2G16950.2 75.028 893 220 3 3 895 2 891 0.0 1397
Msa0183250 AT2G16950.1 74.693 897 220 4 3 895 2 895 0.0 1390
Msa0183250 AT2G16960.1 51.264 554 252 6 357 895 2 552 0.0 548
Msa0183250 AT2G16960.2 51.418 282 114 3 317 598 1 259 5.79e-86 284
Msa0183250 AT2G16960.2 47.984 248 116 3 661 895 258 505 9.58e-63 221
Msa0183250 AT5G53480.1 22.826 552 328 17 68 573 53 552 1.67e-21 101
Msa0183250 AT3G08947.2 24.277 346 189 10 238 555 19 319 3.21e-16 83.6
Msa0183250 AT3G08947.1 24.277 346 189 10 238 555 19 319 3.69e-16 83.6
Msa0183250 AT2G16953.1 45.783 83 17 2 726 808 9 63 7.31e-13 64.7

Find 270 sgRNAs with CRISPR-Local

Find 955 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTCTCTTGATTTGCTTTC+TGG 0.001329 1_4:-72106554 Msa0183250:CDS
TATTTCTTCCCAGATTATTT+AGG 0.165061 1_4:-72112173 Msa0183250:CDS
GATTGGAATATTGTTGAATT+TGG 0.172792 1_4:+72115446 None:intergenic
TTTCCCTGTACATTTCTTAT+AGG 0.193002 1_4:+72101187 None:intergenic
GGGTCTTCTTCGAAGAATTT+TGG 0.204358 1_4:-72108065 Msa0183250:CDS
ACAATTTGACAACGTTCTTA+TGG 0.206291 1_4:-72108086 Msa0183250:CDS
CAAGGAGATCTGCACCTTAT+TGG 0.211567 1_4:-72115521 Msa0183250:CDS
GTACATCGGTGTCAAGAATT+TGG 0.218570 1_4:+72112223 None:intergenic
TTCACGTATTGTTGGTATTC+AGG 0.235848 1_4:+72114351 None:intergenic
CTCTCGAATCCTGTGAATTT+TGG 0.239943 1_4:-72110881 Msa0183250:intron
CAGGCCAATCCTGCTGCAGC+TGG 0.248030 1_4:-72106605 Msa0183250:CDS
CAGATTCTTAGCCTGAATTA+AGG 0.254096 1_4:+72101109 None:intergenic
CAGGTCAAAGCCAATCCTTC+TGG 0.254724 1_4:-72101925 Msa0183250:CDS
AGAAATTTGTTGCTCCAATA+AGG 0.264624 1_4:+72115507 None:intergenic
GTTGACATGCATAGGAAATA+AGG 0.265987 1_4:-72101784 Msa0183250:intron
GTTTAGCAAATTTATTATTC+AGG 0.266638 1_4:-72108593 Msa0183250:intron
GATATTCTCTCAAACGTCTT+TGG 0.272366 1_4:-72109778 Msa0183250:CDS
ATAACCCTGACCGATAAAAT+TGG 0.284787 1_4:+72101292 None:intergenic
TCGTTTAGCTTGATGATTAC+AGG 0.297898 1_4:-72101253 Msa0183250:three_prime_UTR
CTATAAAACTCACTAAATAT+TGG 0.298977 1_4:+72101055 None:intergenic
ATTTCTTCCCAGATTATTTA+GGG 0.299791 1_4:-72112172 Msa0183250:intron
TGATGTTACCCTAAATAATC+TGG 0.300241 1_4:+72112164 None:intergenic
TACAAGGGCTTGCAATAATT+CGG 0.300709 1_4:+72114224 None:intergenic
CAAAGTGCATTTGCCTTACT+TGG 0.306195 1_4:-72105625 Msa0183250:CDS
TACATCGGTGTCAAGAATTT+GGG 0.317331 1_4:+72112224 None:intergenic
TTGTCAACACATGGAATTTA+CGG 0.320017 1_4:-72109822 Msa0183250:CDS
TTGATCCATGGATACATATA+AGG 0.331730 1_4:+72111871 None:intergenic
AGCATGAAATACTTCGTATC+AGG 0.336523 1_4:+72108629 None:intergenic
CAATTTGACAACGTTCTTAT+GGG 0.336844 1_4:-72108085 Msa0183250:CDS
GAGAAAGAAGATGCCTTTAG+AGG 0.340072 1_4:-72102041 Msa0183250:CDS
CTATTGTTGTGTTTATTTGC+TGG 0.342990 1_4:-72115749 Msa0183250:five_prime_UTR
AATTCGTGCACGGCGGATTT+CGG 0.343636 1_4:-72115596 Msa0183250:five_prime_UTR
ATCAGTGTTGTTGTTCAAAC+TGG 0.347298 1_4:-72114264 Msa0183250:CDS
AAGCACCTGATGGTTGCATT+TGG 0.352910 1_4:-72107842 Msa0183250:CDS
CCATACTGCAGCCACATCTA+AGG 0.353767 1_4:-72110956 Msa0183250:intron
AGCACCTGATGGTTGCATTT+GGG 0.375893 1_4:-72107841 Msa0183250:CDS
AGCTATATGTTGCCTTAGGC+AGG 0.377247 1_4:-72100898 Msa0183250:three_prime_UTR
CTTTAAATCACCTCAACAAT+AGG 0.377945 1_4:+72109730 None:intergenic
ATTGTTGAAGTCAGGAAGAT+TGG 0.379166 1_4:+72115429 None:intergenic
TTCAGCAAATTGAGTGAATC+CGG 0.379593 1_4:+72106862 None:intergenic
AATTTGCTGAACCTGTGTTT+AGG 0.380548 1_4:-72106850 Msa0183250:CDS
AGCCCCAGCTGCAGCAGGAT+TGG 0.381992 1_4:+72106601 None:intergenic
CCGCTGATAAGTCTCAGATT+TGG 0.382450 1_4:-72115471 Msa0183250:CDS
TGCTGCCACTTCTCAATTAA+CGG 0.388192 1_4:+72107457 None:intergenic
GTCAAATTGTTCGTAACCCT+TGG 0.388416 1_4:+72108099 None:intergenic
ATGAGGTAATTGTTGAAGTC+AGG 0.393517 1_4:+72115421 None:intergenic
ATGTGTGTGGGTTAGGGTAT+CGG 0.398560 1_4:-72108127 Msa0183250:intron
AGGCCAATCCTGCTGCAGCT+GGG 0.399079 1_4:-72106604 Msa0183250:CDS
GCGCACACATACCAGTTGTT+TGG 0.401100 1_4:+72105305 None:intergenic
AATAATGCATGCTGGGCAAT+TGG 0.401733 1_4:-72105179 Msa0183250:CDS
ATGAGAATGTCAAGATAAAC+AGG 0.402241 1_4:+72107484 None:intergenic
ATCTCCGACGGTTGACAACT+TGG 0.403039 1_4:+72109431 None:intergenic
TGAAGAGCTGGCACCGCGCT+TGG 0.405454 1_4:-72107876 Msa0183250:CDS
ACAAGGGCTTGCAATAATTC+GGG 0.405569 1_4:+72114225 None:intergenic
TTTCATGTATCAAGGTTTCA+TGG 0.405890 1_4:-72110040 Msa0183250:CDS
GAACTCTAGCTGAAGCTGTT+GGG 0.406676 1_4:-72107617 Msa0183250:CDS
AAATGTACAGGAAATTTCTA+AGG 0.406680 1_4:-72105225 Msa0183250:intron
TTCGGCAACGATGGCGGCGG+CGG 0.408972 1_4:-72115578 Msa0183250:exon
ACCTCTGCATGCTGAAGAAT+TGG 0.416754 1_4:+72103250 None:intergenic
TCCTTGAAGCCTTGCTCTTG+TGG 0.420545 1_4:+72115538 None:intergenic
GGCCAATCCTGCTGCAGCTG+GGG 0.422969 1_4:-72106603 Msa0183250:CDS
GGCAGTTCCACAAGCCTTCA+AGG 0.425016 1_4:-72101228 Msa0183250:three_prime_UTR
TGGCAGTGGAATAGAGAGTT+TGG 0.427529 1_4:-72106516 Msa0183250:intron
GGAAATTTCTAAGGTGCATC+AGG 0.428251 1_4:-72105216 Msa0183250:CDS
CTAGAACCTTAGCCAATGTC+TGG 0.433718 1_4:+72106804 None:intergenic
GCCTTCAAGGTCTTATTTGA+CGG 0.439583 1_4:-72101215 Msa0183250:three_prime_UTR
AATTGGAGAATTAGCAGTTA+AGG 0.443187 1_4:-72105162 Msa0183250:intron
TGAACTTGCCTCCAAACAAC+TGG 0.443517 1_4:-72105316 Msa0183250:intron
TGAAGTCCGTCCGTCTATCT+TGG 0.443843 1_4:-72111376 Msa0183250:CDS
ACTCTGATTTCACGTATTGT+TGG 0.445336 1_4:+72114343 None:intergenic
TTCTCAACCTGATCGAGATC+AGG 0.450786 1_4:-72110151 Msa0183250:intron
GTGGAGGTTCGACAGGCTGC+AGG 0.450835 1_4:-72114420 Msa0183250:CDS
TGTTTGTAACACTTTAAAAC+CGG 0.450918 1_4:-72100925 Msa0183250:three_prime_UTR
TAACACTGGGGAGGCTTGCA+TGG 0.452151 1_4:-72103112 Msa0183250:CDS
TTTAAGTGTAATTTCATGCC+TGG 0.452548 1_4:-72103275 Msa0183250:CDS
GGTTGCATTTGGGAAATATC+AGG 0.455320 1_4:-72107831 Msa0183250:intron
GGTCTTGCATGGGTATAAAC+AGG 0.456424 1_4:-72101732 Msa0183250:intron
TGTGTGTGGGTTAGGGTATC+GGG 0.457317 1_4:-72108126 Msa0183250:intron
GGGAAATGAGTTTCAACCTT+CGG 0.457958 1_4:-72101170 Msa0183250:three_prime_UTR
GCACTTGGTGCCATAGGCGA+GGG 0.460140 1_4:-72109375 Msa0183250:CDS
TTGTTACAGGCACTGGGTCC+CGG 0.460458 1_4:-72106881 Msa0183250:intron
AGACCTTGTATCACCACATA+TGG 0.461098 1_4:-72103081 Msa0183250:CDS
CATTGTATCTGCATTGTCCT+TGG 0.461781 1_4:-72101381 Msa0183250:three_prime_UTR
TCGAGCAAGGTCTCCAAGTA+AGG 0.463436 1_4:+72105612 None:intergenic
GCAAGCCCTTGTAAGTTGCT+TGG 0.463586 1_4:-72114214 Msa0183250:CDS
TTCATTAAGAAAGCTATCGT+TGG 0.466949 1_4:-72112030 Msa0183250:CDS
TGCTCTTGTGGTTGCCACGA+TGG 0.468773 1_4:+72115550 None:intergenic
TCAAATTGTTCGTAACCCTT+GGG 0.469035 1_4:+72108100 None:intergenic
AACCTCGATTTCATGTATCA+AGG 0.469473 1_4:-72110048 Msa0183250:CDS
TCTGGGAAGAAATATATTGA+TGG 0.469870 1_4:+72112182 None:intergenic
TACTGAGCCCCAGCTGCAGC+AGG 0.470834 1_4:+72106596 None:intergenic
AATTTCTGTGGAGGTTCGAC+AGG 0.471977 1_4:-72114427 Msa0183250:CDS
GTTTCCTATAAGAAATGTAC+AGG 0.472037 1_4:-72101191 Msa0183250:three_prime_UTR
GAAGCTGCCGTCTTGGCACT+TGG 0.472209 1_4:-72109390 Msa0183250:CDS
TTAATGAAGCGTGAGGTGAT+TGG 0.472656 1_4:+72112045 None:intergenic
ATTGATGCACCCCTCGCCTA+TGG 0.472848 1_4:+72109365 None:intergenic
TGTTGGGGCAGAGCTGAATC+AGG 0.472935 1_4:-72107601 Msa0183250:intron
GAGATGATGGTTGGAAAGAA+AGG 0.473248 1_4:-72109413 Msa0183250:CDS
GGTTTCACAATGTTCTTTGA+GGG 0.475278 1_4:-72105692 Msa0183250:CDS
CTCTGCTAAGCCTGGTACAT+CGG 0.475304 1_4:+72112209 None:intergenic
TTTCAGCTATATGTTGCCTT+AGG 0.475540 1_4:-72100902 Msa0183250:three_prime_UTR
TTGTCAACCGTCGGAGATGA+TGG 0.475872 1_4:-72109426 Msa0183250:CDS
CGCGGAAACTACAAGTTGTC+AGG 0.479948 1_4:+72100963 None:intergenic
AATCCGCCGTGCACGAATTG+AGG 0.481581 1_4:+72115600 None:intergenic
TTAAATTGTATACATTCCTC+AGG 0.483514 1_4:+72114379 None:intergenic
GGAACTCTAGCTGAAGCTGT+TGG 0.485991 1_4:-72107618 Msa0183250:CDS
TTAGGGTATCGGGCATCCCA+AGG 0.486599 1_4:-72108116 Msa0183250:intron
TACTGTCCAAGCAACTTACA+AGG 0.487673 1_4:+72114208 None:intergenic
ATATGTGGTGATACAAGGTC+TGG 0.487991 1_4:+72103083 None:intergenic
TCTGGACTAACAGAGGGTCT+TGG 0.492966 1_4:-72106536 Msa0183250:CDS
ACCACAAGAGCAAGGCTTCA+AGG 0.493504 1_4:-72115539 Msa0183250:CDS
ATAGGCGAGGGGTGCATCAA+TGG 0.494250 1_4:-72109363 Msa0183250:CDS
CTTCATCTTCTCCCGTGCTC+AGG 0.496141 1_4:-72115398 Msa0183250:intron
GGCACTTGGTGCCATAGGCG+AGG 0.496324 1_4:-72109376 Msa0183250:CDS
CATAGCACATAGACCTCTAA+AGG 0.497484 1_4:+72102028 None:intergenic
GGAAACTTATCATCAAGAAG+AGG 0.498404 1_4:+72108652 None:intergenic
ACCGTCAAATAAGACCTTGA+AGG 0.500008 1_4:+72101214 None:intergenic
AGGTTTCACAATGTTCTTTG+AGG 0.500017 1_4:-72105693 Msa0183250:CDS
AGAAAATAGTGCAATAACAC+TGG 0.500123 1_4:-72103126 Msa0183250:CDS
GATAGAGGGAGAAGATGTGA+AGG 0.500318 1_4:-72100996 Msa0183250:three_prime_UTR
TACTCTGATGCCTATTGTTG+AGG 0.503181 1_4:-72109740 Msa0183250:intron
TTCAGGCTAAGAATCTGATT+CGG 0.503925 1_4:-72101103 Msa0183250:three_prime_UTR
GGATGATAATAAGCGTGTAC+AGG 0.504024 1_4:-72108044 Msa0183250:CDS
GATTTCGGCAACGATGGCGG+CGG 0.504335 1_4:-72115581 Msa0183250:exon
GTAGGAGGCTGCTGAAGAGC+TGG 0.505364 1_4:-72107888 Msa0183250:intron
TCATTAAGAAAGCTATCGTT+GGG 0.507655 1_4:-72112029 Msa0183250:CDS
ACTTAGAGCTCCAGAAGGAT+TGG 0.507834 1_4:+72101915 None:intergenic
CCGTGGCAAATAATGCATGC+TGG 0.511391 1_4:-72105187 Msa0183250:CDS
CATGCTGAAGAATTGGTACC+AGG 0.511727 1_4:+72103257 None:intergenic
GAAGTCTGCCAGGTCTTGCA+TGG 0.512364 1_4:-72101743 Msa0183250:CDS
TCCATGGATCAATATCTTCA+AGG 0.514235 1_4:-72111860 Msa0183250:CDS
AGAAAGGGAAGCTGCCGTCT+TGG 0.515248 1_4:-72109397 Msa0183250:CDS
ATTTCCCAAATGCAACCATC+AGG 0.515910 1_4:+72107837 None:intergenic
TCAGAGTTGCTGCCTTGTCT+CGG 0.517680 1_4:-72114327 Msa0183250:CDS
CTAACAGAGGGTCTTGGCAG+TGG 0.521808 1_4:-72106530 Msa0183250:CDS
CACACATACCAGTTGTTTGG+AGG 0.522579 1_4:+72105308 None:intergenic
GCAGATATTGTTGTCAAACA+TGG 0.522794 1_4:-72110316 Msa0183250:intron
ATAGAGGGAGAAGATGTGAA+GGG 0.524564 1_4:-72100995 Msa0183250:three_prime_UTR
GATGTTACCCTAAATAATCT+GGG 0.525662 1_4:+72112165 None:intergenic
CAAGTAAGGCAAATGCACTT+TGG 0.525940 1_4:+72105626 None:intergenic
AGATGCTGCGCAATGGAGCA+TGG 0.527099 1_4:-72101481 Msa0183250:CDS
GTCTTGGCACTTGGTGCCAT+AGG 0.527194 1_4:-72109381 Msa0183250:CDS
AAGCAGACCTGATCTCGATC+AGG 0.528456 1_4:+72110144 None:intergenic
AATAAGACCTTGAAGGCTTG+TGG 0.530307 1_4:+72101221 None:intergenic
CGTGGCAAATAATGCATGCT+GGG 0.532263 1_4:-72105186 Msa0183250:CDS
ATTCTTGACACCGATGTACC+AGG 0.532980 1_4:-72112219 Msa0183250:CDS
AGGCAACATATAGCTGAAAC+CGG 0.533660 1_4:+72100906 None:intergenic
AACTCTAGCTGAAGCTGTTG+GGG 0.536483 1_4:-72107616 Msa0183250:CDS
TAGGCTTACTGGAATAAGAC+GGG 0.537920 1_4:+72110412 None:intergenic
GAAATTACACTTAAAACAAA+CGG 0.538928 1_4:+72103283 None:intergenic
AGATGATGGTTGGAAAGAAA+GGG 0.540726 1_4:-72109412 Msa0183250:CDS
ATGGGCCGCTCTGCTAAGCC+TGG 0.541464 1_4:+72112201 None:intergenic
TGAAATTTGTTACAGGCACT+GGG 0.542098 1_4:-72106887 Msa0183250:intron
TTCAAACGATGCCCTGCCTA+AGG 0.542358 1_4:+72100886 None:intergenic
AGTCCGTCCGTCTATCTTGG+AGG 0.542642 1_4:-72111373 Msa0183250:intron
TGGAGCATTTCATGCAACCT+TGG 0.543238 1_4:-72103061 Msa0183250:CDS
TTTCATGCTGGACAGTATCT+CGG 0.543512 1_4:-72108615 Msa0183250:CDS
CTGGGAAGAAATATATTGAT+GGG 0.543520 1_4:+72112183 None:intergenic
CTTTAGAGGTCTATGTGCTA+TGG 0.547073 1_4:-72102027 Msa0183250:intron
AAATCACATGGAAGGTGCAA+TGG 0.547875 1_4:-72114178 Msa0183250:CDS
GCTCCATATGTGGTGATACA+AGG 0.548018 1_4:+72103078 None:intergenic
TTAGGCCTTATATGTATCCA+TGG 0.548665 1_4:-72111876 Msa0183250:intron
GACAATACCTCTGGCAGATG+AGG 0.549518 1_4:+72109333 None:intergenic
ATTGAGAAGGAGCTTAGTCT+TGG 0.549778 1_4:-72101316 Msa0183250:three_prime_UTR
TTTACACAATGAAGTCTGCC+AGG 0.551434 1_4:-72101753 Msa0183250:CDS
CAGTACAACATTGCAAAAGT+AGG 0.552476 1_4:+72105668 None:intergenic
CAACCGTCGGAGATGATGGT+TGG 0.552627 1_4:-72109422 Msa0183250:CDS
GATGTGAAGCACTCTAGAAG+TGG 0.553176 1_4:+72107406 None:intergenic
CAGTAGTGATTTAAATCACA+TGG 0.555357 1_4:-72114190 Msa0183250:CDS
GTGCAGCAGATAAACACATA+AGG 0.557393 1_4:-72114305 Msa0183250:CDS
TTGCTTTCTGGACTAACAGA+GGG 0.557462 1_4:-72106542 Msa0183250:CDS
GCATGAAATACTTCGTATCA+GGG 0.559620 1_4:+72108630 None:intergenic
GCGGATTTCGGCAACGATGG+CGG 0.561351 1_4:-72115584 Msa0183250:exon
TACTGCAGAAGTGCGGAAGT+TGG 0.562642 1_4:-72111813 Msa0183250:intron
ACCTTGAAGATATTGATCCA+TGG 0.563420 1_4:+72111859 None:intergenic
TCAGACCCAGACATTGGCTA+AGG 0.565324 1_4:-72106810 Msa0183250:intron
TGTGTAAAGCCATTGCAAGT+TGG 0.567608 1_4:-72101879 Msa0183250:CDS
ACATACATGCCAACTTGCAA+TGG 0.570331 1_4:+72101870 None:intergenic
AGAATTGTATATGATGCTGT+TGG 0.571114 1_4:-72107639 Msa0183250:CDS
CAAATAGTACCAAAATTCAC+AGG 0.573838 1_4:+72110872 None:intergenic
AACACTGGGGAGGCTTGCAT+GGG 0.576589 1_4:-72103111 Msa0183250:CDS
GAATGAAGATACCTGAGCAC+GGG 0.578328 1_4:+72115387 None:intergenic
CATCTTCTCCCTCTATCTAG+TGG 0.578741 1_4:+72101002 None:intergenic
CCAGCATGCATTATTTGCCA+CGG 0.578982 1_4:+72105187 None:intergenic
TAGAGGGAGAAGATGTGAAG+GGG 0.581088 1_4:-72100994 Msa0183250:three_prime_UTR
GATGCTGCGCAATGGAGCAT+GGG 0.582692 1_4:-72101480 Msa0183250:CDS
GTTATATAGATGCTGCGCAA+TGG 0.582846 1_4:-72101488 Msa0183250:intron
GTCACACTAGTACTACTACT+AGG 0.583822 1_4:+72115771 None:intergenic
TTGCTGAACCTGTGTTTAGG+AGG 0.584270 1_4:-72106847 Msa0183250:CDS
GAAACTTATCATCAAGAAGA+GGG 0.586624 1_4:+72108653 None:intergenic
AACTTCCGCACTTCTGCAGT+AGG 0.586898 1_4:+72111815 None:intergenic
TTATCTGCTGCACCGAGACA+AGG 0.587214 1_4:+72114315 None:intergenic
GTTTATACCCATGCAAGACC+TGG 0.588423 1_4:+72101735 None:intergenic
CATAATTCAGACCCAGACAT+TGG 0.589201 1_4:-72106816 Msa0183250:CDS
AGTGTTGTTGTTCAAACTGG+AGG 0.589586 1_4:-72114261 Msa0183250:CDS
TTAGGCTTACTGGAATAAGA+CGG 0.590304 1_4:+72110411 None:intergenic
AGTCATGATTCGTATTGAGA+AGG 0.590923 1_4:-72101329 Msa0183250:three_prime_UTR
GGACCAGTGTATGTCTGCAT+TGG 0.592264 1_4:-72101459 Msa0183250:CDS
TGCCACCGTTAATTGAGAAG+TGG 0.593114 1_4:-72107462 Msa0183250:CDS
TCAGCAAATTGAGTGAATCC+GGG 0.593150 1_4:+72106863 None:intergenic
TTTCCAACCATCATCTCCGA+CGG 0.597210 1_4:+72109419 None:intergenic
AATCATATTAAAGCACCTGA+TGG 0.597348 1_4:-72107852 Msa0183250:CDS
TATGGCACCAAGTGCCAAGA+CGG 0.600274 1_4:+72109383 None:intergenic
TGCAATGGATGCATTATCCA+AGG 0.601884 1_4:-72114163 Msa0183250:intron
GAAAATAGTGCAATAACACT+GGG 0.602429 1_4:-72103125 Msa0183250:CDS
TGAACAGGGAATTTCTGTGG+AGG 0.603671 1_4:-72114436 Msa0183250:intron
AAACACATAAGGTCTACGAC+TGG 0.605568 1_4:-72114294 Msa0183250:CDS
CACTTGGTGCCATAGGCGAG+GGG 0.605861 1_4:-72109374 Msa0183250:CDS
GTGATTTGGCTAGGTGTGTG+TGG 0.606145 1_4:-72105370 Msa0183250:intron
CAAGGACGCAGATGAAGAAG+TGG 0.606775 1_4:-72110904 Msa0183250:CDS
TTAGCTTGATGATTACAGGC+AGG 0.608542 1_4:-72101249 Msa0183250:three_prime_UTR
GCTATATGTTGCCTTAGGCA+GGG 0.609191 1_4:-72100897 Msa0183250:three_prime_UTR
CAGCATCATATACAATTCTG+AGG 0.609698 1_4:+72107643 None:intergenic
CACGGGAGAAGATGAAGATG+AGG 0.610536 1_4:+72115404 None:intergenic
ACATTAAACTTACTCGAGCA+AGG 0.610835 1_4:+72105599 None:intergenic
TGATAATAAGCGTGTACAGG+AGG 0.610882 1_4:-72108041 Msa0183250:CDS
ATGACGATGTTGTCAACACA+TGG 0.610953 1_4:-72109831 Msa0183250:CDS
TCGATCACATTCCTTAGATG+TGG 0.611334 1_4:+72110945 None:intergenic
GCTCCAATGCAGACATACAC+TGG 0.614134 1_4:+72101456 None:intergenic
TGATACGAAGTATTTCATGC+TGG 0.614417 1_4:-72108627 Msa0183250:CDS
AGTGATTTAAATCACATGGA+AGG 0.616174 1_4:-72114186 Msa0183250:CDS
CTAAAACCTCAATTCGTGCA+CGG 0.619744 1_4:-72115606 Msa0183250:five_prime_UTR
GTCCAAACCTCCAAGATAGA+CGG 0.620276 1_4:+72111366 None:intergenic
AAAGAATCAAGCATTTCCGA+AGG 0.622406 1_4:+72101154 None:intergenic
ACTTCCGCACTTCTGCAGTA+GGG 0.623309 1_4:+72111816 None:intergenic
CTGACAACTTGTAGTTTCCG+CGG 0.623487 1_4:-72100962 Msa0183250:three_prime_UTR
TGTTGCAAAAGCAGAACAAG+CGG 0.625501 1_4:+72108018 None:intergenic
CAATAGGCATCAGAGTAGGA+AGG 0.628208 1_4:+72109746 None:intergenic
ACGGCGGATTTCGGCAACGA+TGG 0.628300 1_4:-72115587 Msa0183250:exon
TAGGGTATCGGGCATCCCAA+GGG 0.630072 1_4:-72108115 Msa0183250:CDS
AACCTTGATACATGAAATCG+AGG 0.630250 1_4:+72110046 None:intergenic
AAGTCTGCCAGGTCTTGCAT+GGG 0.631867 1_4:-72101742 Msa0183250:CDS
AGCTGGGGCTCAGTATGACA+AGG 0.634404 1_4:-72106588 Msa0183250:CDS
TCGTGGCAACCACAAGAGCA+AGG 0.637116 1_4:-72115547 Msa0183250:CDS
TAGAACCTTAGCCAATGTCT+GGG 0.646402 1_4:+72106805 None:intergenic
AGCTTTCTTAATGAAGCGTG+AGG 0.646529 1_4:+72112038 None:intergenic
CAGGCCAAGTTGTCAACCGT+CGG 0.648622 1_4:-72109435 Msa0183250:CDS
TGCATGAAATGCTCCATATG+TGG 0.649161 1_4:+72103068 None:intergenic
TGAATCGCTTATTGAAGCCG+AGG 0.649193 1_4:-72110277 Msa0183250:intron
TTTATGCACCTCCTAAACAC+AGG 0.650495 1_4:+72106839 None:intergenic
ACCAATTCTTCAGCATGCAG+AGG 0.652188 1_4:-72103251 Msa0183250:intron
AGAATGAAGATACCTGAGCA+CGG 0.654486 1_4:+72115386 None:intergenic
GTATATGTTGCAAGTCAACA+AGG 0.659849 1_4:-72110922 Msa0183250:CDS
CAAGAATTTCAGACAAACGA+GGG 0.660281 1_4:+72105337 None:intergenic
TTTGCTTTCTGGACTAACAG+AGG 0.661941 1_4:-72106543 Msa0183250:CDS
TCAACAATAGGCATCAGAGT+AGG 0.667528 1_4:+72109742 None:intergenic
TCAAGAATTTCAGACAAACG+AGG 0.668611 1_4:+72105336 None:intergenic
GGTGCATCAGGCTATTTCCG+TGG 0.668981 1_4:-72105204 Msa0183250:CDS
CATGAAATACTTCGTATCAG+GGG 0.669623 1_4:+72108631 None:intergenic
AGCGAACTTAGAGCTCCAGA+AGG 0.670498 1_4:+72101910 None:intergenic
ATAGTGCAATAACACTGGGG+AGG 0.677121 1_4:-72103121 Msa0183250:CDS
TGCCACTTCTCAATTAACGG+TGG 0.677949 1_4:+72107460 None:intergenic
GACAACACACATAATGACCA+AGG 0.678693 1_4:+72101364 None:intergenic
ACTGTCCAAGCAACTTACAA+GGG 0.681669 1_4:+72114209 None:intergenic
TATATCTGAAGAATAACCTG+AGG 0.683811 1_4:-72114395 Msa0183250:CDS
ACATCGGTGTCAAGAATTTG+GGG 0.688752 1_4:+72112225 None:intergenic
TTTAATATGATTTCCAAGCG+CGG 0.689897 1_4:+72107863 None:intergenic
TCTTTATCCTCATCTGCCAG+AGG 0.693093 1_4:-72109340 Msa0183250:intron
ATGACCCTACTGCAGAAGTG+CGG 0.693454 1_4:-72111820 Msa0183250:CDS
ATGTACCAGGCTTAGCAGAG+CGG 0.696873 1_4:-72112206 Msa0183250:CDS
AAACCTCCAAGATAGACGGA+CGG 0.697580 1_4:+72111370 None:intergenic
ATTGACAGAGCATTGCACCA+AGG 0.701124 1_4:+72103044 None:intergenic
AAACCTCAATTCGTGCACGG+CGG 0.705426 1_4:-72115603 Msa0183250:five_prime_UTR
CGGCGGCGGTGACACCATCG+TGG 0.714804 1_4:-72115564 Msa0183250:CDS
ACAATGGAACAACTAATCCG+CGG 0.718241 1_4:+72100945 None:intergenic
TTTCCTATAAGAAATGTACA+GGG 0.730244 1_4:-72101190 Msa0183250:three_prime_UTR
AGGCTTACTGGAATAAGACG+GGG 0.733611 1_4:+72110413 None:intergenic
CCAAATCTGAGACTTATCAG+CGG 0.743479 1_4:+72115471 None:intergenic
AAAATAGTGCAATAACACTG+GGG 0.776697 1_4:-72103124 Msa0183250:CDS
AAACTGGAGGAGTTTCACAG+TGG 0.779982 1_4:-72114248 Msa0183250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTT+TGG - chr1_4:72105938-72105957 Msa0183250:intron 0.0%
!!! ATTTCTATTTCTTATTAATT+TGG - chr1_4:72105121-72105140 Msa0183250:intron 10.0%
!! TCAATAAAAAATATTAATGA+TGG + chr1_4:72107743-72107762 None:intergenic 10.0%
!! ATTTAATTAGTATGAAATAA+GGG + chr1_4:72107857-72107876 None:intergenic 10.0%
!! AATTTAATTAGTATGAAATA+AGG + chr1_4:72107858-72107877 None:intergenic 10.0%
!! TTATTTCATACTAATTAAAT+TGG - chr1_4:72107857-72107876 Msa0183250:CDS 10.0%
!!! TTGAAAATTTTAAAACATAA+GGG - chr1_4:72110666-72110685 Msa0183250:intron 10.0%
!!! TATATTTTTGAAAGTAAATT+GGG - chr1_4:72111091-72111110 Msa0183250:intron 10.0%
!! TATTAAAACTAGAATTTAAT+TGG - chr1_4:72111489-72111508 Msa0183250:intron 10.0%
!! GATTATTGAATTTAATAAAA+AGG + chr1_4:72113725-72113744 None:intergenic 10.0%
!!! AAGATTTTAAGATAAAAATC+AGG + chr1_4:72101835-72101854 None:intergenic 15.0%
!! TTGAAAAGAATATATAGAAA+AGG - chr1_4:72102828-72102847 Msa0183250:intron 15.0%
!! TGAAAAGAATATATAGAAAA+GGG - chr1_4:72102829-72102848 Msa0183250:intron 15.0%
!! GGACAAAAAAAAATTTAAAA+GGG + chr1_4:72103632-72103651 None:intergenic 15.0%
!! AGGACAAAAAAAAATTTAAA+AGG + chr1_4:72103633-72103652 None:intergenic 15.0%
!! AAAGAAATAATTAATGTACT+TGG + chr1_4:72103678-72103697 None:intergenic 15.0%
!! AAAAGATGCAAAATAAATAA+GGG + chr1_4:72103710-72103729 None:intergenic 15.0%
!! AAAAAGATGCAAAATAAATA+AGG + chr1_4:72103711-72103730 None:intergenic 15.0%
!!! TTTGCTTAATATTATACTTT+TGG + chr1_4:72103986-72104005 None:intergenic 15.0%
!! TATTAAGCAAAAAACAAAAA+AGG - chr1_4:72103995-72104014 Msa0183250:intron 15.0%
!! AAATTATAATGCATTTCATT+TGG - chr1_4:72105427-72105446 Msa0183250:intron 15.0%
!!! ATTATAATTGTCTGTTTTAT+GGG - chr1_4:72105832-72105851 Msa0183250:intron 15.0%
!! AAAATGAAATGTGTATAATT+AGG + chr1_4:72106194-72106213 None:intergenic 15.0%
!!! TTTTTTTTTTTTTCCTTTTC+AGG - chr1_4:72106403-72106422 Msa0183250:intron 15.0%
!! TGTTAATACAGAAAATAAAA+TGG + chr1_4:72106728-72106747 None:intergenic 15.0%
!!! ATTTTATTTTCTGTATTAAC+AGG - chr1_4:72106727-72106746 Msa0183250:intron 15.0%
!!! TTAATATTTTTTATTGAGTC+TGG - chr1_4:72107746-72107765 Msa0183250:intron 15.0%
!! ATAAAAACAAGAAAAATGAA+TGG + chr1_4:72107892-72107911 None:intergenic 15.0%
!! ATATTTCATTTGAGTATTAA+TGG - chr1_4:72109522-72109541 Msa0183250:intron 15.0%
!! TATTTCATTTGAGTATTAAT+GGG - chr1_4:72109523-72109542 Msa0183250:intron 15.0%
!! CTCAATAAAAAAATTATTAC+AGG + chr1_4:72110178-72110197 None:intergenic 15.0%
!!! ATATTTTTATCTATCCATAA+AGG - chr1_4:72110250-72110269 Msa0183250:intron 15.0%
!! ATTAAGCCAAAAAATAATAA+GGG + chr1_4:72110311-72110330 None:intergenic 15.0%
!! AATTAAGCCAAAAAATAATA+AGG + chr1_4:72110312-72110331 None:intergenic 15.0%
!! GAAAACTAAAATAAACATAA+GGG + chr1_4:72110697-72110716 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG + chr1_4:72110696-72110715 None:intergenic 15.0%
!!! ATGTTTTAAAATTTTCAAGT+TGG + chr1_4:72110664-72110683 None:intergenic 15.0%
!!! CTTGAAAATTTTAAAACATA+AGG - chr1_4:72110665-72110684 Msa0183250:intron 15.0%
!! TGAAAACTAAAATAAACATA+AGG - chr1_4:72110696-72110715 Msa0183250:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG - chr1_4:72110697-72110716 Msa0183250:intron 15.0%
!! TTACTTTCAAAAATATACAA+GGG + chr1_4:72111088-72111107 None:intergenic 15.0%
!! TTTACTTTCAAAAATATACA+AGG + chr1_4:72111089-72111108 None:intergenic 15.0%
!!! GTATATTTTTGAAAGTAAAT+TGG - chr1_4:72111090-72111109 Msa0183250:intron 15.0%
!!! TATTGAGATTATTTAAGATT+AGG - chr1_4:72112768-72112787 Msa0183250:intron 15.0%
!!! CAATATAAATTTTGAATTTC+AGG - chr1_4:72113261-72113280 Msa0183250:intron 15.0%
!!! TAATCTTTATTGGTTAATTT+TGG - chr1_4:72113409-72113428 Msa0183250:intron 15.0%
!! GTATAAAATTATGTGTTATA+AGG + chr1_4:72114592-72114611 None:intergenic 15.0%
!! TTAGTTGAAAGAAAAATAAT+TGG + chr1_4:72115769-72115788 None:intergenic 15.0%
!!! AAAACATTAGCAATTAGTTT+AGG + chr1_4:72101577-72101596 None:intergenic 20.0%
!!! GTATACACAAAATCATATTT+TGG - chr1_4:72101892-72101911 Msa0183250:CDS 20.0%
!! TATAGCAATTTCCAAATATT+TGG - chr1_4:72102719-72102738 Msa0183250:intron 20.0%
!!! TTCTGGAAGATAAATTAATT+AGG + chr1_4:72102998-72103017 None:intergenic 20.0%
!!! CTACAATTGAAATTTTATTC+TGG + chr1_4:72103015-72103034 None:intergenic 20.0%
!! ATTGATCAAGTAAATATTGA+GGG + chr1_4:72103145-72103164 None:intergenic 20.0%
!! AACCATAAAATTGACAAAAA+GGG + chr1_4:72103458-72103477 None:intergenic 20.0%
!!! TTAAAAGGGTCTTATAATTA+GGG + chr1_4:72103618-72103637 None:intergenic 20.0%
!!! TTTAAAAGGGTCTTATAATT+AGG + chr1_4:72103619-72103638 None:intergenic 20.0%
!! TTGATATTTGATCTCTAATT+CGG - chr1_4:72104152-72104171 Msa0183250:intron 20.0%
!! TATAACATATACAGTTGAAA+TGG - chr1_4:72104185-72104204 Msa0183250:intron 20.0%
!! GTTTATAGAAACAGATAATA+TGG + chr1_4:72104289-72104308 None:intergenic 20.0%
!! GTAAAATATTAAGTGTTTGA+AGG + chr1_4:72104313-72104332 None:intergenic 20.0%
!! AATTCAGAAATTTGCAATAT+TGG + chr1_4:72104856-72104875 None:intergenic 20.0%
!! CAATTCGAAATTAATTCTTA+TGG + chr1_4:72105074-72105093 None:intergenic 20.0%
!! ATATATTGTAATCATTCACA+AGG - chr1_4:72105793-72105812 Msa0183250:intron 20.0%
!!! GATTATAATTGTCTGTTTTA+TGG - chr1_4:72105831-72105850 Msa0183250:intron 20.0%
!!! TTATAATTGTCTGTTTTATG+GGG - chr1_4:72105833-72105852 Msa0183250:intron 20.0%
!!! TATAATTGTTTTATGTTGTG+AGG - chr1_4:72106213-72106232 Msa0183250:intron 20.0%
!! GAAAACAAGAGTTAATTTAA+AGG + chr1_4:72106362-72106381 None:intergenic 20.0%
!! TGAAATGACAAGAAAAATAA+TGG - chr1_4:72106682-72106701 Msa0183250:intron 20.0%
!! TAATACAGAAAATAAAATGG+TGG + chr1_4:72106725-72106744 None:intergenic 20.0%
!! CATGATAATTTACTTATTCA+TGG - chr1_4:72107623-72107642 Msa0183250:CDS 20.0%
!! TGAAATTATATCATCCAAAA+AGG + chr1_4:72107678-72107697 None:intergenic 20.0%
!!! TTTCTTGTTTTTATAGATTG+TGG - chr1_4:72107898-72107917 Msa0183250:intron 20.0%
!! GTTTAGCAAATTTATTATTC+AGG - chr1_4:72107991-72108010 Msa0183250:intron 20.0%
!! TTAGCAAATTTATTATTCAG+TGG - chr1_4:72107993-72108012 Msa0183250:intron 20.0%
!! AAAATTTATTAGCATGAACA+TGG + chr1_4:72108144-72108163 None:intergenic 20.0%
!! TCTCAAATTTAAATTGCTTA+CGG - chr1_4:72108674-72108693 Msa0183250:intron 20.0%
!! CATGTGAAATGAATAATATT+TGG - chr1_4:72108814-72108833 Msa0183250:intron 20.0%
!!! TTGATTTTATTTGCTTAAAG+AGG - chr1_4:72109253-72109272 Msa0183250:intron 20.0%
!!! CCTCAAGTAAATTTAAAATA+GGG + chr1_4:72109341-72109360 None:intergenic 20.0%
!!! TCCTCAAGTAAATTTAAAAT+AGG + chr1_4:72109342-72109361 None:intergenic 20.0%
!!! AGATTTTCTTTTATTTTCCA+AGG - chr1_4:72109934-72109953 Msa0183250:intron 20.0%
!!! TATCTCGAAAATAAAAGTTT+TGG + chr1_4:72110101-72110120 None:intergenic 20.0%
!! TACAGTATATTTCATATTCT+TGG - chr1_4:72110142-72110161 Msa0183250:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG - chr1_4:72110350-72110369 Msa0183250:intron 20.0%
!!! CTTGAAACTTTTAAAACATA+AGG + chr1_4:72110378-72110397 None:intergenic 20.0%
!!! ATGTTTTAAAAGTTTCAAGT+TGG - chr1_4:72110379-72110398 Msa0183250:intron 20.0%
!!! TTGAAACTTTTAAAACGTAA+GGG + chr1_4:72110637-72110656 None:intergenic 20.0%
!!! TTGAAACTTTTAAAACGTAA+GGG - chr1_4:72110637-72110656 Msa0183250:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG + chr1_4:72110350-72110369 None:intergenic 20.0%
!! TTATCAATGCACAAAAAATA+AGG + chr1_4:72110741-72110760 None:intergenic 20.0%
!!! TAATTCTTAACTGACAATTT+TGG + chr1_4:72111546-72111565 None:intergenic 20.0%
!! AAAATTGTCAGTTAAGAATT+AGG - chr1_4:72111545-72111564 Msa0183250:intron 20.0%
!!! TATGTATGTGAATTTTCAAA+AGG + chr1_4:72112303-72112322 None:intergenic 20.0%
!! TATATACATATATATGCTCT+TGG - chr1_4:72112596-72112615 Msa0183250:intron 20.0%
!!! TATGCATATGAATTTTCAAA+AGG + chr1_4:72112690-72112709 None:intergenic 20.0%
!! AAAAAAATCTACTCCAAATT+AGG + chr1_4:72113060-72113079 None:intergenic 20.0%
!!! TGTTTTTTATGTTCACTTAT+TGG - chr1_4:72113167-72113186 Msa0183250:intron 20.0%
!! GAAATTACACTTAAAACAAA+CGG + chr1_4:72113304-72113323 None:intergenic 20.0%
!!! TTGTGTATTATTGATAGTTT+TGG - chr1_4:72113372-72113391 Msa0183250:intron 20.0%
!!! TATTGGTTAATTTTGGTTTT+AGG - chr1_4:72113416-72113435 Msa0183250:intron 20.0%
!!! ATTGGTTAATTTTGGTTTTA+GGG - chr1_4:72113417-72113436 Msa0183250:intron 20.0%
!! AACCAAAAAACAAAATATTG+TGG - chr1_4:72113629-72113648 Msa0183250:intron 20.0%
!!! AAATTTTCACAAAATACAGT+AGG + chr1_4:72113759-72113778 None:intergenic 20.0%
!! ACAATTTCACAATTCAATAA+TGG + chr1_4:72113938-72113957 None:intergenic 20.0%
!!! TGTTTTACATATTTTAGTCT+TGG - chr1_4:72113955-72113974 Msa0183250:intron 20.0%
!! CTAAAAATGAGTTTATAAGT+GGG + chr1_4:72114246-72114265 None:intergenic 20.0%
!!! TCAAAACATAAAAGTTTTGT+TGG - chr1_4:72114313-72114332 Msa0183250:CDS 20.0%
!!! AAATTTTCTTGTATGATTTG+TGG - chr1_4:72114501-72114520 Msa0183250:intron 20.0%
!! TTGACATTTAAAAAAAATGG+CGG + chr1_4:72114749-72114768 None:intergenic 20.0%
!! CACTTGACATTTAAAAAAAA+TGG + chr1_4:72114752-72114771 None:intergenic 20.0%
!! TCAACAAAAGAGAATATATT+AGG + chr1_4:72114785-72114804 None:intergenic 20.0%
!! AACTATACATAAAATTCCTA+AGG + chr1_4:72114910-72114929 None:intergenic 20.0%
!!! TACCAATTTTATCATACAAA+TGG + chr1_4:72115009-72115028 None:intergenic 20.0%
!!! TTTGAAAGCTTTTCTTTTAT+TGG + chr1_4:72115156-72115175 None:intergenic 20.0%
!! CTATAAAACTCACTAAATAT+TGG + chr1_4:72115532-72115551 None:intergenic 20.0%
!!! CAATATTTAGTGAGTTTTAT+AGG - chr1_4:72115530-72115549 Msa0183250:CDS 20.0%
!!! TTTTATAGGTTTTGTGAATT+TGG - chr1_4:72115544-72115563 Msa0183250:CDS 20.0%
!!! TTTTAAAGTGTTACAAACAA+TGG + chr1_4:72115658-72115677 None:intergenic 20.0%
! GATTGGAATATTGTTGAATT+TGG + chr1_4:72101141-72101160 None:intergenic 25.0%
! ATGAATGATATAGTTTAACC+TGG - chr1_4:72101493-72101512 Msa0183250:intron 25.0%
! TATATAAAAAACATGTGCTG+TGG - chr1_4:72101771-72101790 Msa0183250:CDS 25.0%
!!! TACACAAAATCATATTTTGG+TGG - chr1_4:72101895-72101914 Msa0183250:CDS 25.0%
! CAAAGAAATGTAGATTATAC+AGG + chr1_4:72101924-72101943 None:intergenic 25.0%
!! TTGAAACGATTTTACGATTA+TGG - chr1_4:72101941-72101960 Msa0183250:intron 25.0%
!!! TATGTGAGTGTTTTAACTAA+CGG - chr1_4:72102081-72102100 Msa0183250:intron 25.0%
! TTAAATTGTATACATTCCTC+AGG + chr1_4:72102208-72102227 None:intergenic 25.0%
! TTAAAATGAAGAACATACCT+TGG + chr1_4:72102441-72102460 None:intergenic 25.0%
!! ATGTACTCTATTTTCTATGT+AGG + chr1_4:72102517-72102536 None:intergenic 25.0%
!! CATAAGAGAATTGTGTTTTA+CGG + chr1_4:72102897-72102916 None:intergenic 25.0%
! GATAAATTAATTAGGACACA+AGG + chr1_4:72102990-72103009 None:intergenic 25.0%
! ATCCAAGAGAAATATTGTTA+CGG + chr1_4:72103049-72103068 None:intergenic 25.0%
! GATTGATCAAGTAAATATTG+AGG + chr1_4:72103146-72103165 None:intergenic 25.0%
! CAACCATAAAATTGACAAAA+AGG + chr1_4:72103459-72103478 None:intergenic 25.0%
!! TTGTCAATTTTATGGTTGTA+TGG - chr1_4:72103461-72103480 Msa0183250:intron 25.0%
!! CAAAATAAATAAGGGTATGT+TGG + chr1_4:72103702-72103721 None:intergenic 25.0%
! TAAATTAACTCTCTCTCTTA+AGG - chr1_4:72103764-72103783 Msa0183250:intron 25.0%
!! TTTCTTAATCTCCGTAATTT+TGG - chr1_4:72103840-72103859 Msa0183250:intron 25.0%
! TACTGTTGTAATTAGAACTA+AGG - chr1_4:72103922-72103941 Msa0183250:intron 25.0%
! ACTGTTGTAATTAGAACTAA+GGG - chr1_4:72103923-72103942 Msa0183250:intron 25.0%
! AAGGGAAACAATCATTAATA+GGG + chr1_4:72104044-72104063 None:intergenic 25.0%
! TATTTCTTCCCAGATTATTT+AGG - chr1_4:72104411-72104430 Msa0183250:intron 25.0%
! ATTTCTTCCCAGATTATTTA+GGG - chr1_4:72104412-72104431 Msa0183250:intron 25.0%
! TGAAGTATAACATTGAAGTT+TGG - chr1_4:72104654-72104673 Msa0183250:intron 25.0%
! TAGTTCAATTCATTCTGTTT+AGG - chr1_4:72104690-72104709 Msa0183250:intron 25.0%
! GATGAAACCTATCAAAAATT+AGG + chr1_4:72105049-72105068 None:intergenic 25.0%
! AAATAGAAATAGATGACTTG+AGG + chr1_4:72105111-72105130 None:intergenic 25.0%
! TGAGTTAGTAGAAAAAAACT+AGG - chr1_4:72105396-72105415 Msa0183250:intron 25.0%
! TAACAATTGATCAGAAAAGA+GGG + chr1_4:72105607-72105626 None:intergenic 25.0%
! TTAACAATTGATCAGAAAAG+AGG + chr1_4:72105608-72105627 None:intergenic 25.0%
!!! AATTTTGGTACTATTTGGTT+GGG - chr1_4:72105718-72105737 Msa0183250:intron 25.0%
! CTTTCTAAATATACAGCTAA+AGG - chr1_4:72105747-72105766 Msa0183250:intron 25.0%
! AGCTATAATCTATACCAATA+TGG - chr1_4:72105879-72105898 Msa0183250:intron 25.0%
! GCTATAATCTATACCAATAT+GGG - chr1_4:72105880-72105899 Msa0183250:intron 25.0%
!!! TTTTTGATAATTGCTATTGC+AGG - chr1_4:72106097-72106116 Msa0183250:intron 25.0%
!!! TCTTGTTTTCTTGATTACAT+AGG - chr1_4:72106372-72106391 Msa0183250:intron 25.0%
!!! AATTTTAGTAGTTTTTCCAC+AGG - chr1_4:72106507-72106526 Msa0183250:intron 25.0%
! CTATCAATTCAAAGTTAGAT+TGG - chr1_4:72106914-72106933 Msa0183250:intron 25.0%
! AATCAATATGACATTCACAA+TGG + chr1_4:72107021-72107040 None:intergenic 25.0%
! ATAATATAAGACAATACCTC+TGG + chr1_4:72107263-72107282 None:intergenic 25.0%
!! CTGAAGTTTTTCATTGAAAT+AGG + chr1_4:72108076-72108095 None:intergenic 25.0%
! AATTCACAAAATGCATCATT+GGG - chr1_4:72108105-72108124 Msa0183250:CDS 25.0%
!! TTGTAGTTTGTCCAAATTAT+TGG - chr1_4:72108295-72108314 Msa0183250:intron 25.0%
!! TGTAGTTTGTCCAAATTATT+GGG - chr1_4:72108296-72108315 Msa0183250:intron 25.0%
!! TTTGTCTTTTCCCAATAATT+TGG + chr1_4:72108309-72108328 None:intergenic 25.0%
! AAATTTAAATTGCTTACGGT+AGG - chr1_4:72108678-72108697 Msa0183250:intron 25.0%
!!! TTTTTTGTACTATACTTCAG+AGG - chr1_4:72108913-72108932 Msa0183250:intron 25.0%
!! AGGAGAAAAGAGAAAATTTT+GGG + chr1_4:72109034-72109053 None:intergenic 25.0%
! TAAACTGTGATAAATAACTG+AGG + chr1_4:72109054-72109073 None:intergenic 25.0%
! AAAAGATGTGTGTAATAAAC+TGG + chr1_4:72109223-72109242 None:intergenic 25.0%
!!! CCCTATTTTAAATTTACTTG+AGG - chr1_4:72109338-72109357 Msa0183250:intron 25.0%
!!! AGTTTTTGGTACCATAAAAA+GGG - chr1_4:72109446-72109465 Msa0183250:intron 25.0%
! TTGTATATGCATGGAATATT+GGG - chr1_4:72109590-72109609 Msa0183250:intron 25.0%
! TTGGGAAGCTATATATTATT+TGG - chr1_4:72109608-72109627 Msa0183250:intron 25.0%
! ATATTATTTGGATTGCTTGA+TGG - chr1_4:72109620-72109639 Msa0183250:intron 25.0%
! AAAAATTTATATCAGGAGCA+AGG + chr1_4:72109673-72109692 None:intergenic 25.0%
!! TTGCTCCTGATATAAATTTT+TGG - chr1_4:72109672-72109691 Msa0183250:intron 25.0%
! TCACACCAAAAATTTATATC+AGG + chr1_4:72109680-72109699 None:intergenic 25.0%
!!! ACATACTCATTTTTTAGTAG+TGG - chr1_4:72109899-72109918 Msa0183250:intron 25.0%
! ATAAAAGAAAATCTCAAACG+CGG + chr1_4:72109928-72109947 None:intergenic 25.0%
! AAAGGTAAAATATGCCTTTA+TGG + chr1_4:72110267-72110286 None:intergenic 25.0%
! CCAAAAAATAATAAGGGTTT+AGG + chr1_4:72110305-72110324 None:intergenic 25.0%
!!! CCTAAACCCTTATTATTTTT+TGG - chr1_4:72110302-72110321 Msa0183250:CDS 25.0%
!!! CTTGAAACTTTTAAAACGTA+AGG + chr1_4:72110636-72110655 None:intergenic 25.0%
!!! ACGTTTTAAAAGTTTCAAGT+TGG - chr1_4:72110408-72110427 Msa0183250:intron 25.0%
!!! ACGTTTTAAAAGTTTCAAGT+TGG + chr1_4:72110408-72110427 None:intergenic 25.0%
!!! CTTGAAACTTTTAAAACGTA+AGG - chr1_4:72110636-72110655 Msa0183250:intron 25.0%
! TTATTAGAATGCTATCAACT+AGG + chr1_4:72111192-72111211 None:intergenic 25.0%
!!! AGTTGATAGCATTCTAATAA+TGG - chr1_4:72111192-72111211 Msa0183250:intron 25.0%
! AGAAATTTCCTGTACATTTA+TGG + chr1_4:72111358-72111377 None:intergenic 25.0%
! AAATGTACAGGAAATTTCTA+AGG - chr1_4:72111359-72111378 Msa0183250:intron 25.0%
!!! AGAATTTAATTGGCATTGAT+AGG - chr1_4:72111499-72111518 Msa0183250:intron 25.0%
!!! CGGATATACACTTAATTTTT+TGG + chr1_4:72112158-72112177 None:intergenic 25.0%
! ATACTCAACATAACTGAAAA+AGG + chr1_4:72112713-72112732 None:intergenic 25.0%
! TAATCTCAATAGTTTAGAAG+AGG + chr1_4:72112759-72112778 None:intergenic 25.0%
! AGCTTAATATATATGCTCTT+TGG - chr1_4:72112832-72112851 Msa0183250:intron 25.0%
! CTTTAAACATTTAATGTGGA+AGG + chr1_4:72112899-72112918 None:intergenic 25.0%
! CTTCCACATTAAATGTTTAA+AGG - chr1_4:72112897-72112916 Msa0183250:intron 25.0%
!!! TGTATTATTGATAGTTTTGG+AGG - chr1_4:72113375-72113394 Msa0183250:intron 25.0%
!! CTCTTATCTTTAAAAGTTCT+TGG - chr1_4:72113588-72113607 Msa0183250:intron 25.0%
!!! CATATTTTAGTCTTGGAATT+TGG - chr1_4:72113962-72113981 Msa0183250:intron 25.0%
! CTGAAAGTAAGTTTATAAGT+GGG + chr1_4:72114039-72114058 None:intergenic 25.0%
! CCTAAAAATGAGTTTATAAG+TGG + chr1_4:72114247-72114266 None:intergenic 25.0%
!!! CCACTTATAAACTCATTTTT+AGG - chr1_4:72114244-72114263 Msa0183250:CDS 25.0%
! ATTTATAGACACAAGATATC+CGG + chr1_4:72114485-72114504 None:intergenic 25.0%
!! ATAATTTTATACACGTAGAC+TGG - chr1_4:72114600-72114619 Msa0183250:intron 25.0%
!!! TACAATTTACGTTTGTTTTC+AGG - chr1_4:72114640-72114659 Msa0183250:intron 25.0%
! ATCTACTAAAAAGGTGAAAA+GGG + chr1_4:72114982-72115001 None:intergenic 25.0%
! TTTCCTATAAGAAATGTACA+GGG - chr1_4:72115394-72115413 Msa0183250:intron 25.0%
! AGTTAAAAAAGCCTTAATTC+AGG - chr1_4:72115464-72115483 Msa0183250:CDS 25.0%
!!! TGTTTGTAACACTTTAAAAC+CGG - chr1_4:72115659-72115678 Msa0183250:five_prime_UTR 25.0%
CTATTGTTGTGTTTATTTGC+TGG - chr1_4:72100835-72100854 Msa0183250:three_prime_UTR 30.0%
!! TTTTAGAGAGAGAAAGAAAG+AGG + chr1_4:72100964-72100983 None:intergenic 30.0%
!! AGAAATTTGTTGCTCCAATA+AGG + chr1_4:72101080-72101099 None:intergenic 30.0%
ACGCAAGATTAAGCAAAATT+AGG + chr1_4:72101237-72101256 None:intergenic 30.0%
!! GTTAATTTGTTGCTTCAACA+AGG - chr1_4:72101335-72101354 Msa0183250:three_prime_UTR 30.0%
AATTAATGAACTGAACTAGC+AGG + chr1_4:72101425-72101444 None:intergenic 30.0%
TGAACTGCAATTGATAAAAC+TGG - chr1_4:72101689-72101708 Msa0183250:intron 30.0%
GCATTTAAGAGTTTATTGAC+TGG + chr1_4:72101746-72101765 None:intergenic 30.0%
! TTGGCAATTTTCTTTTGAAC+AGG - chr1_4:72102133-72102152 Msa0183250:intron 30.0%
! TGGCAATTTTCTTTTGAACA+GGG - chr1_4:72102134-72102153 Msa0183250:intron 30.0%
TATATCTGAAGAATAACCTG+AGG - chr1_4:72102189-72102208 Msa0183250:intron 30.0%
CAGTAGTGATTTAAATCACA+TGG - chr1_4:72102394-72102413 Msa0183250:intron 30.0%
AGTGATTTAAATCACATGGA+AGG - chr1_4:72102398-72102417 Msa0183250:intron 30.0%
AGAGTACATCCATTATATAG+AGG - chr1_4:72102528-72102547 Msa0183250:intron 30.0%
TTCTGTGTACCTCTATATAA+TGG + chr1_4:72102540-72102559 None:intergenic 30.0%
TATGACCATTCAATGTATGT+GGG + chr1_4:72102626-72102645 None:intergenic 30.0%
AAATTAATTAGGACACAAGG+AGG + chr1_4:72102987-72103006 None:intergenic 30.0%
AGAGAAATATTGTTACGGAT+GGG + chr1_4:72103044-72103063 None:intergenic 30.0%
AAGAGAAATATTGTTACGGA+TGG + chr1_4:72103045-72103064 None:intergenic 30.0%
ATCCGTAACAATATTTCTCT+TGG - chr1_4:72103044-72103063 Msa0183250:CDS 30.0%
TAATTTGGAGATTCTAGATG+TGG - chr1_4:72103096-72103115 Msa0183250:CDS 30.0%
AGAAAAGGGATATTAACTGA+AGG + chr1_4:72103177-72103196 None:intergenic 30.0%
! TATCCCTTTTCTTACATAGT+TGG - chr1_4:72103185-72103204 Msa0183250:intron 30.0%
CAACCAACTATGTAAGAAAA+GGG + chr1_4:72103191-72103210 None:intergenic 30.0%
! CTTTTCTTACATAGTTGGTT+GGG - chr1_4:72103190-72103209 Msa0183250:intron 30.0%
AAGTTACATCAGAAATTGAC+TGG + chr1_4:72103397-72103416 None:intergenic 30.0%
! CTCCCTTTTTGTCAATTTTA+TGG - chr1_4:72103453-72103472 Msa0183250:intron 30.0%
! TTCTTATAATTCTGCTGACT+TGG - chr1_4:72103508-72103527 Msa0183250:intron 30.0%
TAATGTACTTGGATACCAAA+GGG + chr1_4:72103667-72103686 None:intergenic 30.0%
TTAATGTACTTGGATACCAA+AGG + chr1_4:72103668-72103687 None:intergenic 30.0%
ATTACGGAGATTAAGAAAGT+TGG + chr1_4:72103838-72103857 None:intergenic 30.0%
!!! TATTGGTTTTAGAAACTGCA+AGG - chr1_4:72103895-72103914 Msa0183250:intron 30.0%
CTGTTGTAATTAGAACTAAG+GGG - chr1_4:72103924-72103943 Msa0183250:intron 30.0%
AGGGAAACAATCATTAATAG+GGG + chr1_4:72104043-72104062 None:intergenic 30.0%
GAAGGGAAACAATCATTAAT+AGG + chr1_4:72104045-72104064 None:intergenic 30.0%
!!! TCACTGGTTTTTTAAGTGTT+TGG - chr1_4:72104222-72104241 Msa0183250:intron 30.0%
CTGGGAAGAAATATATTGAT+GGG + chr1_4:72104404-72104423 None:intergenic 30.0%
TCTGGGAAGAAATATATTGA+TGG + chr1_4:72104405-72104424 None:intergenic 30.0%
GATGTTACCCTAAATAATCT+GGG + chr1_4:72104422-72104441 None:intergenic 30.0%
TGATGTTACCCTAAATAATC+TGG + chr1_4:72104423-72104442 None:intergenic 30.0%
AAAAACTGAAAGGGAAAAAC+AGG + chr1_4:72104519-72104538 None:intergenic 30.0%
TTCATTAAGAAAGCTATCGT+TGG - chr1_4:72104554-72104573 Msa0183250:intron 30.0%
TCATTAAGAAAGCTATCGTT+GGG - chr1_4:72104555-72104574 Msa0183250:intron 30.0%
TTGATCCATGGATACATATA+AGG + chr1_4:72104716-72104735 None:intergenic 30.0%
!!! CAAATCCACCTTATTTTTGT+TGG - chr1_4:72104893-72104912 Msa0183250:intron 30.0%
CATCCAAACCAACAAAAATA+AGG + chr1_4:72104904-72104923 None:intergenic 30.0%
!!! CTTATTTTTGTTGGTTTGGA+TGG - chr1_4:72104902-72104921 Msa0183250:intron 30.0%
! TTGATTGAATATGCTGTTTG+TGG - chr1_4:72105296-72105315 Msa0183250:intron 30.0%
! TGATTGAATATGCTGTTTGT+GGG - chr1_4:72105297-72105316 Msa0183250:intron 30.0%
TTATGTGAAGTGTAATGTGA+TGG + chr1_4:72105363-72105382 None:intergenic 30.0%
CAAATAGTACCAAAATTCAC+AGG + chr1_4:72105715-72105734 None:intergenic 30.0%
!! CTGTGAATTTTGGTACTATT+TGG - chr1_4:72105713-72105732 Msa0183250:intron 30.0%
!! GAATTTTGGTACTATTTGGT+TGG - chr1_4:72105717-72105736 Msa0183250:intron 30.0%
TTGTAATCATTCACAAGGAA+AGG - chr1_4:72105798-72105817 Msa0183250:intron 30.0%
! CAATGGTATCTGATTTTACA+AGG - chr1_4:72105915-72105934 Msa0183250:intron 30.0%
! AAGAATTCTCTCAAGTTTTC+TGG + chr1_4:72106150-72106169 None:intergenic 30.0%
ATGTGTATAATTAGGCTTAC+TGG + chr1_4:72106186-72106205 None:intergenic 30.0%
AATCAAGTGAAAGAAAACCT+CGG + chr1_4:72106327-72106346 None:intergenic 30.0%
!!! TTTTTTTCCTTTTCAGGAAG+AGG - chr1_4:72106409-72106428 Msa0183250:intron 30.0%
!!! TTTTTTCCTTTTCAGGAAGA+GGG - chr1_4:72106410-72106429 Msa0183250:intron 30.0%
TTTCATGTATCAAGGTTTCA+TGG - chr1_4:72106544-72106563 Msa0183250:CDS 30.0%
!! AAAATAATGGTTTGCTGATC+TGG - chr1_4:72106695-72106714 Msa0183250:intron 30.0%
TTGTCAACACATGGAATTTA+CGG - chr1_4:72106762-72106781 Msa0183250:intron 30.0%
CTTTAAATCACCTCAACAAT+AGG + chr1_4:72106857-72106876 None:intergenic 30.0%
AAAAACTTCTGTGGCAATTT+AGG + chr1_4:72106984-72107003 None:intergenic 30.0%
CTTTAGTAGATCCTCATAAA+GGG + chr1_4:72107113-72107132 None:intergenic 30.0%
ACTTTAGTAGATCCTCATAA+AGG + chr1_4:72107114-72107133 None:intergenic 30.0%
! AAGTTTCTAAGAATGTGAAC+AGG - chr1_4:72107130-72107149 Msa0183250:intron 30.0%
!!! GCTCAAACACCTTTTTTTTA+GGG - chr1_4:72107454-72107473 Msa0183250:CDS 30.0%
!!! CTCAAACACCTTTTTTTTAG+GGG - chr1_4:72107455-72107474 Msa0183250:CDS 30.0%
CAAAGTGATCAAACATCTTA+AGG + chr1_4:72107551-72107570 None:intergenic 30.0%
TAAGATGTTTGATCACTTTG+AGG - chr1_4:72107551-72107570 Msa0183250:intron 30.0%
GATACTTCTTTCCCAATAAA+GGG - chr1_4:72107573-72107592 Msa0183250:intron 30.0%
GAAACTTATCATCAAGAAGA+GGG + chr1_4:72107934-72107953 None:intergenic 30.0%
CAATTCACAAAATGCATCAT+TGG - chr1_4:72108104-72108123 Msa0183250:CDS 30.0%
AAATCTTAGCTCAATCTCAA+TGG - chr1_4:72108253-72108272 Msa0183250:intron 30.0%
TAATAAATAACATGTGCTCC+TGG + chr1_4:72108333-72108352 None:intergenic 30.0%
CAACTACAAATCAATCAACT+CGG + chr1_4:72108381-72108400 None:intergenic 30.0%
GGTGTATAAATTTCATTGAG+AGG - chr1_4:72108415-72108434 Msa0183250:intron 30.0%
ACAATTTGACAACGTTCTTA+TGG - chr1_4:72108498-72108517 Msa0183250:intron 30.0%
CAATTTGACAACGTTCTTAT+GGG - chr1_4:72108499-72108518 Msa0183250:intron 30.0%
TTTAATATGATTTCCAAGCG+CGG + chr1_4:72108724-72108743 None:intergenic 30.0%
! AATCATATTAAAGCACCTGA+TGG - chr1_4:72108732-72108751 Msa0183250:intron 30.0%
AGAATTGTATATGATGCTGT+TGG - chr1_4:72108945-72108964 Msa0183250:intron 30.0%
!! GAAAAGAGAAAATTTTGGGA+TGG + chr1_4:72109030-72109049 None:intergenic 30.0%
! GAGGAGAAAAGAGAAAATTT+TGG + chr1_4:72109035-72109054 None:intergenic 30.0%
ATGAGAATGTCAAGATAAAC+AGG + chr1_4:72109103-72109122 None:intergenic 30.0%
TGCATAATGCTAGTAATCAA+GGG + chr1_4:72109308-72109327 None:intergenic 30.0%
ATGCATAATGCTAGTAATCA+AGG + chr1_4:72109309-72109328 None:intergenic 30.0%
AAAACTCATGAAAGAAAGAG+CGG + chr1_4:72109432-72109451 None:intergenic 30.0%
! CTCTTTCTTTCATGAGTTTT+TGG - chr1_4:72109432-72109451 Msa0183250:CDS 30.0%
!!! GAGTTTTTGGTACCATAAAA+AGG - chr1_4:72109445-72109464 Msa0183250:intron 30.0%
! AACAGCAAATACCCTTTTTA+TGG + chr1_4:72109460-72109479 None:intergenic 30.0%
GTTGTATATGCATGGAATAT+TGG - chr1_4:72109589-72109608 Msa0183250:intron 30.0%
!! TTTGGTGTGAAATTTGTTAC+AGG - chr1_4:72109690-72109709 Msa0183250:intron 30.0%
! ATGATGGAAAATGAAATCAC+AGG + chr1_4:72109854-72109873 None:intergenic 30.0%
TAATAGTAGCAGTAACATGA+TGG + chr1_4:72109870-72109889 None:intergenic 30.0%
AGACAACAAACTTAATTCCT+TGG + chr1_4:72109954-72109973 None:intergenic 30.0%
!! TAAGTTTGTTGTCTTGTTTC+AGG - chr1_4:72109960-72109979 Msa0183250:intron 30.0%
! TTCCAATGTGAGTAATGTTT+TGG + chr1_4:72110435-72110454 None:intergenic 30.0%
TCACTTAACGTTTAGAGATT+CGG + chr1_4:72110571-72110590 None:intergenic 30.0%
! GCATTGATAAGTCTTTGAAA+TGG - chr1_4:72110751-72110770 Msa0183250:intron 30.0%
GATAACCTCAAGAAATCATA+CGG + chr1_4:72110855-72110874 None:intergenic 30.0%
!!! AAGTAAATTGGGTTAGCTTT+TGG - chr1_4:72111102-72111121 Msa0183250:intron 30.0%
!!! GAGGCAGATCTTTTTTTTTT+GGG - chr1_4:72111124-72111143 Msa0183250:intron 30.0%
!!! CAGATCTTTTTTTTTTGGGT+GGG - chr1_4:72111128-72111147 Msa0183250:intron 30.0%
GCATTCTAATAATGGTGATT+TGG - chr1_4:72111200-72111219 Msa0183250:intron 30.0%
TGTGTAGCTAAACTTATAAC+AGG + chr1_4:72111304-72111323 None:intergenic 30.0%
TTTATGGCATATCAACAAGA+GGG + chr1_4:72111342-72111361 None:intergenic 30.0%
ATTTATGGCATATCAACAAG+AGG + chr1_4:72111343-72111362 None:intergenic 30.0%
TTGATATGCCATAAATGTAC+AGG - chr1_4:72111347-72111366 Msa0183250:intron 30.0%
AATTGGAGAATTAGCAGTTA+AGG - chr1_4:72111422-72111441 Msa0183250:intron 30.0%
!! GAATTTTAGCATATGAACGT+TGG + chr1_4:72111625-72111644 None:intergenic 30.0%
ATGCTAAAATTCACGTATGA+AGG - chr1_4:72111633-72111652 Msa0183250:intron 30.0%
TCATAGAAAACCAGATTAAG+AGG - chr1_4:72111744-72111763 Msa0183250:intron 30.0%
AAGTTGAAGTTGTGATCAAA+AGG + chr1_4:72111797-72111816 None:intergenic 30.0%
GTGTAGATCCTCTTAATATT+GGG - chr1_4:72111913-72111932 Msa0183250:intron 30.0%
! CCAATTTTCCCAATATTAAG+AGG + chr1_4:72111924-72111943 None:intergenic 30.0%
CCTCTTAATATTGGGAAAAT+TGG - chr1_4:72111921-72111940 Msa0183250:intron 30.0%
AAAGCTAAATAGTGTATGAG+CGG + chr1_4:72112245-72112264 None:intergenic 30.0%
AAAAAAATGAAGTGCGGAAA+TGG + chr1_4:72112277-72112296 None:intergenic 30.0%
AGGCTTAAAAAAATGAAGTG+CGG + chr1_4:72112283-72112302 None:intergenic 30.0%
!!! ACATACCTTTTTCAGTTATG+TGG - chr1_4:72112318-72112337 Msa0183250:intron 30.0%
ATACTCCACATAACTGAAAA+AGG + chr1_4:72112326-72112345 None:intergenic 30.0%
! TGTGGAGATTGTTTAAGATT+AGG - chr1_4:72112381-72112400 Msa0183250:intron 30.0%
ATACATATATATGCTCTTGG+TGG - chr1_4:72112599-72112618 Msa0183250:intron 30.0%
TACATATATATGCTCTTGGT+GGG - chr1_4:72112600-72112619 Msa0183250:intron 30.0%
! ACAGATTCACTATTTAGCTT+GGG - chr1_4:72112631-72112650 Msa0183250:intron 30.0%
AAAAAAATGAAGTGCAGAAG+TGG + chr1_4:72112664-72112683 None:intergenic 30.0%
GTGCCTTTAAACATTTAATG+TGG + chr1_4:72112903-72112922 None:intergenic 30.0%
! TGTACTAATGTCTAAGATTG+AGG - chr1_4:72112996-72113015 Msa0183250:intron 30.0%
AAAATCTACTCCAAATTAGG+TGG + chr1_4:72113057-72113076 None:intergenic 30.0%
!!! TGGAGTAGATTTTTTTTGCA+CGG - chr1_4:72113064-72113083 Msa0183250:intron 30.0%
AAACAAGAAAACAAACCCAT+CGG + chr1_4:72113152-72113171 None:intergenic 30.0%
TTTAAGTGTAATTTCATGCC+TGG - chr1_4:72113309-72113328 Msa0183250:intron 30.0%
AGTCAGTTGCTAATCTTTAT+TGG - chr1_4:72113399-72113418 Msa0183250:intron 30.0%
AGAAAATAGTGCAATAACAC+TGG - chr1_4:72113458-72113477 Msa0183250:intron 30.0%
GAAAATAGTGCAATAACACT+GGG - chr1_4:72113459-72113478 Msa0183250:intron 30.0%
AAAATAGTGCAATAACACTG+GGG - chr1_4:72113460-72113479 Msa0183250:intron 30.0%
!!! GGCCACAATATTTTGTTTTT+TGG + chr1_4:72113634-72113653 None:intergenic 30.0%
AAAGTAAGTTTATAAGTGGG+AGG + chr1_4:72114036-72114055 None:intergenic 30.0%
CCTGAAAGTAAGTTTATAAG+TGG + chr1_4:72114040-72114059 None:intergenic 30.0%
CCACTTATAAACTTACTTTC+AGG - chr1_4:72114037-72114056 Msa0183250:intron 30.0%
TCTGATACCATCTTAGAATT+TGG - chr1_4:72114169-72114188 Msa0183250:CDS 30.0%
! ACTTGATCCAAATTCTAAGA+TGG + chr1_4:72114179-72114198 None:intergenic 30.0%
TCATGCATAGAAACATATGA+TGG - chr1_4:72114387-72114406 Msa0183250:CDS 30.0%
TTTAAAAAAAATGGCGGTGT+TGG + chr1_4:72114743-72114762 None:intergenic 30.0%
CATCTACTAAAAAGGTGAAA+AGG + chr1_4:72114983-72115002 None:intergenic 30.0%
!! TTTCACCTTTTTAGTAGATG+TGG - chr1_4:72114983-72115002 Msa0183250:intron 30.0%
GGCCATTTGTATGATAAAAT+TGG - chr1_4:72115004-72115023 Msa0183250:intron 30.0%
CAGCATCTATATAACAATCA+TGG + chr1_4:72115091-72115110 None:intergenic 30.0%
! GAAAGCTTTTCTTTTATTGG+CGG + chr1_4:72115153-72115172 None:intergenic 30.0%
!! TAGTCTTGGTCCAATTTTAT+CGG - chr1_4:72115282-72115301 Msa0183250:intron 30.0%
GTTTCCTATAAGAAATGTAC+AGG - chr1_4:72115393-72115412 Msa0183250:intron 30.0%
TTTCCCTGTACATTTCTTAT+AGG + chr1_4:72115400-72115419 None:intergenic 30.0%
ATTGTTGAAGTCAGGAAGAT+TGG + chr1_4:72101158-72101177 None:intergenic 35.0%
ATGAGGTAATTGTTGAAGTC+AGG + chr1_4:72101166-72101185 None:intergenic 35.0%
TAGTTCAGTGACGAAGATTA+TGG - chr1_4:72101313-72101332 Msa0183250:three_prime_UTR 35.0%
ACAAGGTTGCGTTGTTTAAA+CGG - chr1_4:72101352-72101371 Msa0183250:three_prime_UTR 35.0%
TGTATACTCGTAATCGTTGA+GGG + chr1_4:72101879-72101898 None:intergenic 35.0%
!!! TGTTTTAACTAACGGAGTCA+TGG - chr1_4:72102089-72102108 Msa0183250:intron 35.0%
! TTTTGAACAGGGAATTTCTG+TGG - chr1_4:72102145-72102164 Msa0183250:intron 35.0%
TTCACGTATTGTTGGTATTC+AGG + chr1_4:72102236-72102255 None:intergenic 35.0%
ACTCTGATTTCACGTATTGT+TGG + chr1_4:72102244-72102263 None:intergenic 35.0%
! ATCAGTGTTGTTGTTCAAAC+TGG - chr1_4:72102320-72102339 Msa0183250:intron 35.0%
TACAAGGGCTTGCAATAATT+CGG + chr1_4:72102363-72102382 None:intergenic 35.0%
AACTGTTATAGAGAGATGAG+AGG - chr1_4:72102565-72102584 Msa0183250:intron 35.0%
ACTGTTATAGAGAGATGAGA+GGG - chr1_4:72102566-72102585 Msa0183250:intron 35.0%
CTATGACCATTCAATGTATG+TGG + chr1_4:72102627-72102646 None:intergenic 35.0%
CACATACATTGAATGGTCAT+AGG - chr1_4:72102625-72102644 Msa0183250:intron 35.0%
ATTGAATGGTCATAGGATGA+TGG - chr1_4:72102632-72102651 Msa0183250:intron 35.0%
!! CAAATATTTGGTGCGTCTAT+GGG - chr1_4:72102731-72102750 Msa0183250:intron 35.0%
AAACCTAATAGAAGCTCACA+TGG + chr1_4:72102779-72102798 None:intergenic 35.0%
! TGAGCTTCTATTAGGTTTTC+AGG - chr1_4:72102781-72102800 Msa0183250:intron 35.0%
TAAGAAGGGAATTCTTCTCT+TGG + chr1_4:72102871-72102890 None:intergenic 35.0%
! GTGTTTTACGGTTGTAAGAA+GGG + chr1_4:72102885-72102904 None:intergenic 35.0%
! TGTGTTTTACGGTTGTAAGA+AGG + chr1_4:72102886-72102905 None:intergenic 35.0%
GTTTGACTGTTATGACTGTT+GGG + chr1_4:72102940-72102959 None:intergenic 35.0%
AGTTTGACTGTTATGACTGT+TGG + chr1_4:72102941-72102960 None:intergenic 35.0%
AACAGTCAAACTCACTTAAC+CGG - chr1_4:72102949-72102968 Msa0183250:intron 35.0%
GAGAAATATTGTTACGGATG+GGG + chr1_4:72103043-72103062 None:intergenic 35.0%
TCCTCAAAGTTGAGCTAATT+TGG - chr1_4:72103081-72103100 Msa0183250:CDS 35.0%
TCCAAATTAGCTCAACTTTG+AGG + chr1_4:72103085-72103104 None:intergenic 35.0%
CCAACCAACTATGTAAGAAA+AGG + chr1_4:72103192-72103211 None:intergenic 35.0%
! CCTTTTCTTACATAGTTGGT+TGG - chr1_4:72103189-72103208 Msa0183250:intron 35.0%
TCTACCATAGTTGTAGATTG+AGG + chr1_4:72103230-72103249 None:intergenic 35.0%
CAATCTACAACTATGGTAGA+TGG - chr1_4:72103230-72103249 Msa0183250:intron 35.0%
TTCTTCTGCTTTCTTTAGCT+AGG - chr1_4:72103273-72103292 Msa0183250:CDS 35.0%
AGCTAGGATACATGAAAAAC+AGG - chr1_4:72103289-72103308 Msa0183250:CDS 35.0%
ATTAATGCCTCACTTAACCA+TGG - chr1_4:72103351-72103370 Msa0183250:intron 35.0%
TTAATGCCTCACTTAACCAT+GGG - chr1_4:72103352-72103371 Msa0183250:intron 35.0%
CTATGATGTCAATCTGATAG+AGG - chr1_4:72103570-72103589 Msa0183250:intron 35.0%
! AAGGGTCTTATAATTAGGGA+CGG + chr1_4:72103614-72103633 None:intergenic 35.0%
! TCCTTTTTATAAGACCCCTT+TGG - chr1_4:72103649-72103668 Msa0183250:intron 35.0%
! ACCAAAGGGGTCTTATAAAA+AGG + chr1_4:72103653-72103672 None:intergenic 35.0%
AATGTACTTGGATACCAAAG+GGG + chr1_4:72103666-72103685 None:intergenic 35.0%
!! ATCTCCGTAATTTTGGCAAA+AGG - chr1_4:72103847-72103866 Msa0183250:intron 35.0%
GCAAAAGGCTCCTATATTTA+GGG - chr1_4:72103862-72103881 Msa0183250:intron 35.0%
TCATTAATAGGGGAACTAGA+AGG + chr1_4:72104033-72104052 None:intergenic 35.0%
!! TTCTTTGGAATCAAGTGATG+AGG + chr1_4:72104067-72104086 None:intergenic 35.0%
GATTCCAAAGAACAGAAATG+AGG - chr1_4:72104075-72104094 Msa0183250:intron 35.0%
TTTGCCTCATTTCTGTTCTT+TGG + chr1_4:72104082-72104101 None:intergenic 35.0%
TACAGTTGAAATGGATAGAG+AGG - chr1_4:72104194-72104213 Msa0183250:intron 35.0%
!! TACATCGGTGTCAAGAATTT+GGG + chr1_4:72104363-72104382 None:intergenic 35.0%
GGTGATTGGAAAAACTGAAA+GGG + chr1_4:72104528-72104547 None:intergenic 35.0%
AGGTGATTGGAAAAACTGAA+AGG + chr1_4:72104529-72104548 None:intergenic 35.0%
! ACTTTACCATCTCTGTTTTC+TGG - chr1_4:72104628-72104647 Msa0183250:intron 35.0%
TCATAACCAGAAAACAGAGA+TGG + chr1_4:72104637-72104656 None:intergenic 35.0%
! TTAGGCCTTATATGTATCCA+TGG - chr1_4:72104708-72104727 Msa0183250:intron 35.0%
TCCATGGATCAATATCTTCA+AGG - chr1_4:72104724-72104743 Msa0183250:intron 35.0%
ACCTTGAAGATATTGATCCA+TGG + chr1_4:72104728-72104747 None:intergenic 35.0%
CCAAACCAACAAAAATAAGG+TGG + chr1_4:72104901-72104920 None:intergenic 35.0%
!!! CCACCTTATTTTTGTTGGTT+TGG - chr1_4:72104898-72104917 Msa0183250:intron 35.0%
GAGGAAAAGATCAAAGAATC+AGG + chr1_4:72104935-72104954 None:intergenic 35.0%
! GGCGAAACCTAATTTTTGAT+AGG - chr1_4:72105039-72105058 Msa0183250:intron 35.0%
! GATTGAATATGCTGTTTGTG+GGG - chr1_4:72105298-72105317 Msa0183250:intron 35.0%
GTAGAAAAAAACTAGGAAGC+TGG - chr1_4:72105403-72105422 Msa0183250:intron 35.0%
AAAGAGGGAGCTGATAATAA+AGG + chr1_4:72105592-72105611 None:intergenic 35.0%
GTATATGTTGCAAGTCAACA+AGG - chr1_4:72105662-72105681 Msa0183250:CDS 35.0%
CACAAGGAAAGGAATAAACT+TGG - chr1_4:72105809-72105828 Msa0183250:intron 35.0%
! ATTGTCTGTTTTATGGGGAA+AGG - chr1_4:72105838-72105857 Msa0183250:intron 35.0%
! TTGTCTGTTTTATGGGGAAA+GGG - chr1_4:72105839-72105858 Msa0183250:intron 35.0%
GTGAGATATACTTCCCATAT+TGG + chr1_4:72105896-72105915 None:intergenic 35.0%
! ATGGGAAGTATATCTCACAA+TGG - chr1_4:72105898-72105917 Msa0183250:intron 35.0%
!! AGTTTGCTGATAACAGAAAC+AGG + chr1_4:72106002-72106021 None:intergenic 35.0%
! AATTCTCTCAAGTTTTCTGG+TGG + chr1_4:72106147-72106166 None:intergenic 35.0%
TTAGGCTTACTGGAATAAGA+CGG + chr1_4:72106176-72106195 None:intergenic 35.0%
GCAGATATTGTTGTCAAACA+TGG - chr1_4:72106268-72106287 Msa0183250:intron 35.0%
!!! CTTGATTTTGGTTGAGTTAC+TGG - chr1_4:72106460-72106479 Msa0183250:intron 35.0%
AACCTCGATTTCATGTATCA+AGG - chr1_4:72106536-72106555 Msa0183250:CDS 35.0%
AACCTTGATACATGAAATCG+AGG + chr1_4:72106541-72106560 None:intergenic 35.0%
GATATTCTCTCAAACGTCTT+TGG - chr1_4:72106806-72106825 Msa0183250:intron 35.0%
AACTTCATTCCAACAAGAAG+GGG + chr1_4:72106880-72106899 None:intergenic 35.0%
CAACTTCATTCCAACAAGAA+GGG + chr1_4:72106881-72106900 None:intergenic 35.0%
ACAACTTCATTCCAACAAGA+AGG + chr1_4:72106882-72106901 None:intergenic 35.0%
TTGGAATGAAGTTGTTGAAC+TGG - chr1_4:72106887-72106906 Msa0183250:intron 35.0%
! AGATGATGGTTGGAAAGAAA+GGG - chr1_4:72107172-72107191 Msa0183250:intron 35.0%
GACTTAAATGCAAAAGCAGA+TGG - chr1_4:72107291-72107310 Msa0183250:intron 35.0%
!!! CGCTCAAACACCTTTTTTTT+AGG - chr1_4:72107453-72107472 Msa0183250:CDS 35.0%
! TTCCCTCAAACAACTTGTTT+AGG - chr1_4:72107478-72107497 Msa0183250:CDS 35.0%
GACCTAAACAAGTTGTTTGA+GGG + chr1_4:72107483-72107502 None:intergenic 35.0%
AGACCTAAACAAGTTGTTTG+AGG + chr1_4:72107484-72107503 None:intergenic 35.0%
! ACAACTTGTTTAGGTCTTAC+TGG - chr1_4:72107487-72107506 Msa0183250:CDS 35.0%
TAAGGAACAGCTCTATTGAA+AGG + chr1_4:72107533-72107552 None:intergenic 35.0%
GGATACTTCTTTCCCAATAA+AGG - chr1_4:72107572-72107591 Msa0183250:intron 35.0%
ATAGCACAAAGCCCTTTATT+GGG + chr1_4:72107587-72107606 None:intergenic 35.0%
! TAATCACTGTCATGCCTTTT+TGG - chr1_4:72107661-72107680 Msa0183250:intron 35.0%
GGAAACTTATCATCAAGAAG+AGG + chr1_4:72107935-72107954 None:intergenic 35.0%
CATGAAATACTTCGTATCAG+GGG + chr1_4:72107956-72107975 None:intergenic 35.0%
GCATGAAATACTTCGTATCA+GGG + chr1_4:72107957-72107976 None:intergenic 35.0%
AGCATGAAATACTTCGTATC+AGG + chr1_4:72107958-72107977 None:intergenic 35.0%
! TGATACGAAGTATTTCATGC+TGG - chr1_4:72107957-72107976 Msa0183250:intron 35.0%
! GGTATGCATGTAAAGTATCT+TGG - chr1_4:72108012-72108031 Msa0183250:CDS 35.0%
!! AAAATGCATCATTGGGTTGA+AGG - chr1_4:72108112-72108131 Msa0183250:CDS 35.0%
TATTGGGAAAAGACAAAACC+AGG - chr1_4:72108312-72108331 Msa0183250:intron 35.0%
!! CGAGTTGATTGATTTGTAGT+TGG - chr1_4:72108379-72108398 Msa0183250:intron 35.0%
GTAGTTGGATATAGTGCAAT+TGG - chr1_4:72108394-72108413 Msa0183250:intron 35.0%
CACACATCAAGATTCAAACA+AGG + chr1_4:72108444-72108463 None:intergenic 35.0%
TGTTTGAATCTTGATGTGTG+TGG - chr1_4:72108444-72108463 Msa0183250:intron 35.0%
GTTTGAATCTTGATGTGTGT+GGG - chr1_4:72108445-72108464 Msa0183250:intron 35.0%
TCAAATTGTTCGTAACCCTT+GGG + chr1_4:72108487-72108506 None:intergenic 35.0%
GAAACTGAACTAACTCATGA+AGG + chr1_4:72108629-72108648 None:intergenic 35.0%
TTTAAATTGCTTACGGTAGG+AGG - chr1_4:72108681-72108700 Msa0183250:intron 35.0%
ATCAACACAGAACTGTGATA+AGG + chr1_4:72108790-72108809 None:intergenic 35.0%
CAGCATCATATACAATTCTG+AGG + chr1_4:72108944-72108963 None:intergenic 35.0%
!!! AAATTTTGGGATGGAGAAGA+AGG + chr1_4:72109021-72109040 None:intergenic 35.0%
AAACTCATGAAAGAAAGAGC+GGG + chr1_4:72109431-72109450 None:intergenic 35.0%
GTTCTCATGTTGTATATGCA+TGG - chr1_4:72109581-72109600 Msa0183250:intron 35.0%
GAGCAAGGAAATGCATATAA+TGG + chr1_4:72109658-72109677 None:intergenic 35.0%
!! TGAAATTTGTTACAGGCACT+GGG - chr1_4:72109697-72109716 Msa0183250:intron 35.0%
TTCAGCAAATTGAGTGAATC+CGG + chr1_4:72109725-72109744 None:intergenic 35.0%
!! AATTTGCTGAACCTGTGTTT+AGG - chr1_4:72109734-72109753 Msa0183250:intron 35.0%
CTAGTCATTCTTACTCATTG+TGG - chr1_4:72109799-72109818 Msa0183250:CDS 35.0%
AGGCGCAAGATAAAGATTAA+AGG + chr1_4:72110285-72110304 None:intergenic 35.0%
GTCCAAAACATTACTCACAT+TGG - chr1_4:72110430-72110449 Msa0183250:CDS 35.0%
CTCAATATCATGTCACAGAA+TGG + chr1_4:72110467-72110486 None:intergenic 35.0%
CACTTAACGTTTAGAGATTC+GGG + chr1_4:72110570-72110589 None:intergenic 35.0%
TCTAAACGTTAAGTGACTGA+AGG - chr1_4:72110575-72110594 Msa0183250:intron 35.0%
CTAAACGTTAAGTGACTGAA+GGG - chr1_4:72110576-72110595 Msa0183250:intron 35.0%
! TTCCAACGTGAGTAATGTTT+TGG - chr1_4:72110608-72110627 Msa0183250:intron 35.0%
ATCTGCATTTCCTGAACTTT+CGG - chr1_4:72110781-72110800 Msa0183250:intron 35.0%
TATCTCAATTACTACTCTGC+AGG - chr1_4:72110871-72110890 Msa0183250:intron 35.0%
AGGTTTCACAATGTTCTTTG+AGG - chr1_4:72110891-72110910 Msa0183250:CDS 35.0%
GGTTTCACAATGTTCTTTGA+GGG - chr1_4:72110892-72110911 Msa0183250:CDS 35.0%
CAGTACAACATTGCAAAAGT+AGG + chr1_4:72110919-72110938 None:intergenic 35.0%
ACATTAAACTTACTCGAGCA+AGG + chr1_4:72110988-72111007 None:intergenic 35.0%
ATCCTGTGTTTAATGACCAT+AGG + chr1_4:72111050-72111069 None:intergenic 35.0%
!!! TAAATTGGGTTAGCTTTTGG+AGG - chr1_4:72111105-72111124 Msa0183250:intron 35.0%
!!! GGAGGCAGATCTTTTTTTTT+TGG - chr1_4:72111123-72111142 Msa0183250:intron 35.0%
!!! GCAGATCTTTTTTTTTTGGG+TGG - chr1_4:72111127-72111146 Msa0183250:intron 35.0%
! CTAATAATGGTGATTTGGCT+AGG - chr1_4:72111205-72111224 Msa0183250:intron 35.0%
CAAGAATTTCAGACAAACGA+GGG + chr1_4:72111250-72111269 None:intergenic 35.0%
TCAAGAATTTCAGACAAACG+AGG + chr1_4:72111251-72111270 None:intergenic 35.0%
! AATTCACGTATGAAGGCATA+TGG - chr1_4:72111640-72111659 Msa0183250:intron 35.0%
!! CACTAATGACTACTTTTGCT+GGG + chr1_4:72111703-72111722 None:intergenic 35.0%
!! TCACTAATGACTACTTTTGC+TGG + chr1_4:72111704-72111723 None:intergenic 35.0%
TTCTATGAAGATGATCACAG+TGG + chr1_4:72111732-72111751 None:intergenic 35.0%
TTGTGATCAACCTCTTAATC+TGG + chr1_4:72111757-72111776 None:intergenic 35.0%
TTGATCACAAAGTGATTGAG+AGG - chr1_4:72111767-72111786 Msa0183250:intron 35.0%
GGTGTAGATCCTCTTAATAT+TGG - chr1_4:72111912-72111931 Msa0183250:intron 35.0%
!! TTTCTCTGAAGCATAGATTC+GGG + chr1_4:72111977-72111996 None:intergenic 35.0%
!! CTTTCTCTGAAGCATAGATT+CGG + chr1_4:72111978-72111997 None:intergenic 35.0%
TTTCATTGTCGAGTGAACTA+TGG - chr1_4:72112046-72112065 Msa0183250:CDS 35.0%
GTATATCCGCAACAAGTTTA+AGG - chr1_4:72112169-72112188 Msa0183250:intron 35.0%
!! AATCAGCCTTAAACTTGTTG+CGG + chr1_4:72112178-72112197 None:intergenic 35.0%
AAGCTAAATAGTGTATGAGC+GGG + chr1_4:72112244-72112263 None:intergenic 35.0%
! GCTCATACACTATTTAGCTT+TGG - chr1_4:72112244-72112263 Msa0183250:intron 35.0%
ACATATATATGCTCTTGGTG+GGG - chr1_4:72112601-72112620 Msa0183250:intron 35.0%
CACAGATTCACTATTTAGCT+TGG - chr1_4:72112630-72112649 Msa0183250:intron 35.0%
! ACATTACTCCATTTCAAGTC+TGG + chr1_4:72112979-72112998 None:intergenic 35.0%
! AATGTCTAAGATTGAGGCTT+TGG - chr1_4:72113002-72113021 Msa0183250:intron 35.0%
AACAAGAAAACAAACCCATC+GGG + chr1_4:72113151-72113170 None:intergenic 35.0%
AAGATAAGAGCTCCAGAAAT+GGG + chr1_4:72113578-72113597 None:intergenic 35.0%
AAAGATAAGAGCTCCAGAAA+TGG + chr1_4:72113579-72113598 None:intergenic 35.0%
TTCTTGGTCCAATTATTGTC+TGG - chr1_4:72113604-72113623 Msa0183250:intron 35.0%
ATTGCATAATCTCATGCAGT+GGG + chr1_4:72113696-72113715 None:intergenic 35.0%
AATTGCATAATCTCATGCAG+TGG + chr1_4:72113697-72113716 None:intergenic 35.0%
AATACAGTAGGAAGAGAATG+TGG + chr1_4:72113747-72113766 None:intergenic 35.0%
! TAGTCTTGGAATTTGGATTG+AGG - chr1_4:72113969-72113988 Msa0183250:intron 35.0%
! TTTTCAAATTAGACGAGACG+TGG + chr1_4:72114063-72114082 None:intergenic 35.0%
GAGTATATCCAAGATGTGTT+AGG + chr1_4:72114151-72114170 None:intergenic 35.0%
AGGTCTCATATCATCTAATG+TGG - chr1_4:72114264-72114283 Msa0183250:CDS 35.0%
GGTCTCATATCATCTAATGT+GGG - chr1_4:72114265-72114284 Msa0183250:CDS 35.0%
TATGCATGACTACCAAATAC+AGG + chr1_4:72114376-72114395 None:intergenic 35.0%
TCCACTTTACAAATTGATCC+TGG - chr1_4:72114434-72114453 Msa0183250:intron 35.0%
ACCAGGATCAATTTGTAAAG+TGG + chr1_4:72114438-72114457 None:intergenic 35.0%
AGAGATGACATCTAAAAACC+AGG + chr1_4:72114455-72114474 None:intergenic 35.0%
! TTTCTTGTATGATTTGTGGC+AGG - chr1_4:72114505-72114524 Msa0183250:intron 35.0%
! TCTCTTTTGTTGACATGCAT+AGG - chr1_4:72114792-72114811 Msa0183250:intron 35.0%
GTTGACATGCATAGGAAATA+AGG - chr1_4:72114800-72114819 Msa0183250:intron 35.0%
AATGGCCACATCTACTAAAA+AGG + chr1_4:72114991-72115010 None:intergenic 35.0%
TGTCTTAAATCCTGATTCCT+TGG - chr1_4:72115047-72115066 Msa0183250:intron 35.0%
GTCTTAAATCCTGATTCCTT+GGG - chr1_4:72115048-72115067 Msa0183250:intron 35.0%
TCTTAAATCCTGATTCCTTG+GGG - chr1_4:72115049-72115068 Msa0183250:intron 35.0%
ATATCATAAATTCTCCCCCA+AGG + chr1_4:72115067-72115086 None:intergenic 35.0%
AGTCATGATTCGTATTGAGA+AGG - chr1_4:72115255-72115274 Msa0183250:intron 35.0%
ATAACCCTGACCGATAAAAT+TGG + chr1_4:72115295-72115314 None:intergenic 35.0%
!! TCGTTTAGCTTGATGATTAC+AGG - chr1_4:72115331-72115350 Msa0183250:intron 35.0%
AAAGAATCAAGCATTTCCGA+AGG + chr1_4:72115433-72115452 None:intergenic 35.0%
CAGATTCTTAGCCTGAATTA+AGG + chr1_4:72115478-72115497 None:intergenic 35.0%
TTCAGGCTAAGAATCTGATT+CGG - chr1_4:72115481-72115500 Msa0183250:CDS 35.0%
!! AGTTTTGTACCACTAGATAG+AGG - chr1_4:72115573-72115592 Msa0183250:exon 35.0%
! GTTTTGTACCACTAGATAGA+GGG - chr1_4:72115574-72115593 Msa0183250:exon 35.0%
TTTCAGCTATATGTTGCCTT+AGG - chr1_4:72115682-72115701 Msa0183250:five_prime_UTR 35.0%
CTAAAACCTCAATTCGTGCA+CGG - chr1_4:72100978-72100997 Msa0183250:three_prime_UTR 40.0%
! CCAAATCTGAGACTTATCAG+CGG + chr1_4:72101116-72101135 None:intergenic 40.0%
AGAATGAAGATACCTGAGCA+CGG + chr1_4:72101201-72101220 None:intergenic 40.0%
CAGATTATTCTGTATCGCAG+TGG - chr1_4:72101640-72101659 Msa0183250:intron 40.0%
GTGTATACTCGTAATCGTTG+AGG + chr1_4:72101880-72101899 None:intergenic 40.0%
TACGATTATGGTCGCAATGA+TGG - chr1_4:72101953-72101972 Msa0183250:intron 40.0%
! GTGTTATGTTGCTGTTACAG+TGG - chr1_4:72102058-72102077 Msa0183250:CDS 40.0%
GTGCAGCAGATAAACACATA+AGG - chr1_4:72102279-72102298 Msa0183250:intron 40.0%
AAACACATAAGGTCTACGAC+TGG - chr1_4:72102290-72102309 Msa0183250:intron 40.0%
! AGTGTTGTTGTTCAAACTGG+AGG - chr1_4:72102323-72102342 Msa0183250:intron 40.0%
ACAAGGGCTTGCAATAATTC+GGG + chr1_4:72102362-72102381 None:intergenic 40.0%
ACTGTCCAAGCAACTTACAA+GGG + chr1_4:72102378-72102397 None:intergenic 40.0%
TACTGTCCAAGCAACTTACA+AGG + chr1_4:72102379-72102398 None:intergenic 40.0%
! AAATCACATGGAAGGTGCAA+TGG - chr1_4:72102406-72102425 Msa0183250:intron 40.0%
TGCAATGGATGCATTATCCA+AGG - chr1_4:72102421-72102440 Msa0183250:intron 40.0%
CTGTTATAGAGAGATGAGAG+GGG - chr1_4:72102567-72102586 Msa0183250:intron 40.0%
TGTTATAGAGAGATGAGAGG+GGG - chr1_4:72102568-72102587 Msa0183250:intron 40.0%
TTCTGCCCACATACATTGAA+TGG - chr1_4:72102618-72102637 Msa0183250:intron 40.0%
CCATAGACGCACCAAATATT+TGG + chr1_4:72102733-72102752 None:intergenic 40.0%
!! CCAAATATTTGGTGCGTCTA+TGG - chr1_4:72102730-72102749 Msa0183250:intron 40.0%
!! TTAGGTTTTCAGGAGTAGAG+AGG - chr1_4:72102791-72102810 Msa0183250:intron 40.0%
!! TAGGTTTTCAGGAGTAGAGA+GGG - chr1_4:72102792-72102811 Msa0183250:intron 40.0%
AATATTGTTACGGATGGGGA+GGG + chr1_4:72103039-72103058 None:intergenic 40.0%
AAATATTGTTACGGATGGGG+AGG + chr1_4:72103040-72103059 None:intergenic 40.0%
! TTAGCTCAACTTTGAGGACA+AGG + chr1_4:72103079-72103098 None:intergenic 40.0%
ATAGTTGTAGATTGAGGCAG+AGG + chr1_4:72103224-72103243 None:intergenic 40.0%
TCTGCCTCAATCTACAACTA+TGG - chr1_4:72103223-72103242 Msa0183250:intron 40.0%
! ATACTATGAGCCTTTTCCCA+TGG + chr1_4:72103371-72103390 None:intergenic 40.0%
AAGCAACTACTGATGTGCAA+AGG - chr1_4:72103430-72103449 Msa0183250:intron 40.0%
! GGAGCCTTTTGCCAAAATTA+CGG + chr1_4:72103854-72103873 None:intergenic 40.0%
GGCAAAAGGCTCCTATATTT+AGG - chr1_4:72103861-72103880 Msa0183250:intron 40.0%
AAGGCTCCTATATTTAGGGA+CGG - chr1_4:72103866-72103885 Msa0183250:intron 40.0%
!!! TGGTTTTAGAAACTGCAAGG+AGG - chr1_4:72103898-72103917 Msa0183250:intron 40.0%
TGGAATCAAGTGATGAGGAA+GGG + chr1_4:72104062-72104081 None:intergenic 40.0%
TTGGAATCAAGTGATGAGGA+AGG + chr1_4:72104063-72104082 None:intergenic 40.0%
ACAGAAATGAGGCAAAAGCT+AGG - chr1_4:72104086-72104105 Msa0183250:intron 40.0%
! GAAGTATCATCTGCTGATAC+TGG + chr1_4:72104261-72104280 None:intergenic 40.0%
!! ACATCGGTGTCAAGAATTTG+GGG + chr1_4:72104362-72104381 None:intergenic 40.0%
!! GTACATCGGTGTCAAGAATT+TGG + chr1_4:72104364-72104383 None:intergenic 40.0%
AAGGGAAAAACAGGAACAGT+TGG + chr1_4:72104510-72104529 None:intergenic 40.0%
TTAATGAAGCGTGAGGTGAT+TGG + chr1_4:72104542-72104561 None:intergenic 40.0%
AGCTTTCTTAATGAAGCGTG+AGG + chr1_4:72104549-72104568 None:intergenic 40.0%
TAGAATATGCCGCAAGTTCA+TGG + chr1_4:72104961-72104980 None:intergenic 40.0%
GGGAATATTGCATATTGAGC+TGG - chr1_4:72105318-72105337 Msa0183250:CDS 40.0%
AAGCTAATGACCACTAGACT+TGG + chr1_4:72105555-72105574 None:intergenic 40.0%
TCGATCACATTCCTTAGATG+TGG + chr1_4:72105642-72105661 None:intergenic 40.0%
! CTCTCGAATCCTGTGAATTT+TGG - chr1_4:72105703-72105722 Msa0183250:intron 40.0%
! TGTCTGTTTTATGGGGAAAG+GGG - chr1_4:72105840-72105859 Msa0183250:intron 40.0%
AAAACGATACAGAAGCTTGC+AGG + chr1_4:72106076-72106095 None:intergenic 40.0%
TAGGCTTACTGGAATAAGAC+GGG + chr1_4:72106175-72106194 None:intergenic 40.0%
! AGATCAGGTCTGCTTGATTT+TGG - chr1_4:72106448-72106467 Msa0183250:intron 40.0%
! AATCGAGGTTTAAGATCCTG+TGG + chr1_4:72106526-72106545 None:intergenic 40.0%
ATGACGATGTTGTCAACACA+TGG - chr1_4:72106753-72106772 Msa0183250:intron 40.0%
TCAACAATAGGCATCAGAGT+AGG + chr1_4:72106845-72106864 None:intergenic 40.0%
TACTCTGATGCCTATTGTTG+AGG - chr1_4:72106844-72106863 Msa0183250:CDS 40.0%
! GATTTAAAGCCCCTTCTTGT+TGG - chr1_4:72106868-72106887 Msa0183250:CDS 40.0%
GACAGCAACAAAAACTTCTG+TGG + chr1_4:72106993-72107012 None:intergenic 40.0%
! GAGATGATGGTTGGAAAGAA+AGG - chr1_4:72107171-72107190 Msa0183250:intron 40.0%
TGAGGGAACCCCTAAAAAAA+AGG + chr1_4:72107466-72107485 None:intergenic 40.0%
GATAGCACAAAGCCCTTTAT+TGG + chr1_4:72107588-72107607 None:intergenic 40.0%
! AAAGGGCTTTGTGCTATCAT+TGG - chr1_4:72107590-72107609 Msa0183250:intron 40.0%
ACTAAATGCTGTCGTTGTCA+AGG + chr1_4:72107704-72107723 None:intergenic 40.0%
! ACGAATTTTGTGTGAGCATG+AGG + chr1_4:72107795-72107814 None:intergenic 40.0%
TTTCATGCTGGACAGTATCT+CGG - chr1_4:72107969-72107988 Msa0183250:intron 40.0%
TATTAGCATGAACATGGAGC+AGG + chr1_4:72108138-72108157 None:intergenic 40.0%
CTCAATGGATCGTGATCAAT+TGG - chr1_4:72108268-72108287 Msa0183250:intron 40.0%
AATCTTGATGTGTGTGGGTT+AGG - chr1_4:72108450-72108469 Msa0183250:intron 40.0%
! ATCTTGATGTGTGTGGGTTA+GGG - chr1_4:72108451-72108470 Msa0183250:intron 40.0%
GTCAAATTGTTCGTAACCCT+TGG + chr1_4:72108488-72108507 None:intergenic 40.0%
! GGGTCTTCTTCGAAGAATTT+TGG - chr1_4:72108519-72108538 Msa0183250:intron 40.0%
GGATGATAATAAGCGTGTAC+AGG - chr1_4:72108540-72108559 Msa0183250:intron 40.0%
TGATAATAAGCGTGTACAGG+AGG - chr1_4:72108543-72108562 Msa0183250:intron 40.0%
TGTTGCAAAAGCAGAACAAG+CGG + chr1_4:72108569-72108588 None:intergenic 40.0%
! TGCTTTTGCAACACTAGAAG+AGG - chr1_4:72108576-72108595 Msa0183250:intron 40.0%
ATTTCCCAAATGCAACCATC+AGG + chr1_4:72108750-72108769 None:intergenic 40.0%
GGTTGCATTTGGGAAATATC+AGG - chr1_4:72108753-72108772 Msa0183250:intron 40.0%
ACACAGAACTGTGATAAGGT+CGG + chr1_4:72108786-72108805 None:intergenic 40.0%
TGTCCTTCTCATCATATGCA+TGG - chr1_4:72108869-72108888 Msa0183250:intron 40.0%
TGACCATGCATATGATGAGA+AGG + chr1_4:72108875-72108894 None:intergenic 40.0%
! TGCTGCCACTTCTCAATTAA+CGG + chr1_4:72109130-72109149 None:intergenic 40.0%
ACAGCAAAGATTTCAGTCTG+AGG + chr1_4:72109486-72109505 None:intergenic 40.0%
! CAGACTGAAATCTTTGCTGT+TGG - chr1_4:72109486-72109505 Msa0183250:intron 40.0%
!! GTGAAATTTGTTACAGGCAC+TGG - chr1_4:72109696-72109715 Msa0183250:intron 40.0%
TCAGCAAATTGAGTGAATCC+GGG + chr1_4:72109724-72109743 None:intergenic 40.0%
TTTATGCACCTCCTAAACAC+AGG + chr1_4:72109748-72109767 None:intergenic 40.0%
CATAATTCAGACCCAGACAT+TGG - chr1_4:72109768-72109787 Msa0183250:CDS 40.0%
TAGAACCTTAGCCAATGTCT+GGG + chr1_4:72109782-72109801 None:intergenic 40.0%
!! TGCTCTCTTGATTTGCTTTC+TGG - chr1_4:72110030-72110049 Msa0183250:CDS 40.0%
TTTGCTTTCTGGACTAACAG+AGG - chr1_4:72110041-72110060 Msa0183250:CDS 40.0%
TTGCTTTCTGGACTAACAGA+GGG - chr1_4:72110042-72110061 Msa0183250:CDS 40.0%
TAACGTTTAGAGATTCGGGT+TGG + chr1_4:72110566-72110585 None:intergenic 40.0%
GTCCAAAACATTACTCACGT+TGG + chr1_4:72110613-72110632 None:intergenic 40.0%
! GACGTATTGATATCTGCTTG+AGG - chr1_4:72110813-72110832 Msa0183250:intron 40.0%
TCAAGAAATCATACGGTCAC+TGG + chr1_4:72110848-72110867 None:intergenic 40.0%
AGTGACCGTATGATTTCTTG+AGG - chr1_4:72110847-72110866 Msa0183250:intron 40.0%
CAAGTAAGGCAAATGCACTT+TGG + chr1_4:72110961-72110980 None:intergenic 40.0%
CAAAGTGCATTTGCCTTACT+TGG - chr1_4:72110959-72110978 Msa0183250:intron 40.0%
TGCCTATGGTCATTAAACAC+AGG - chr1_4:72111045-72111064 Msa0183250:intron 40.0%
AATATACAAGGGTCAGCTTG+TGG + chr1_4:72111077-72111096 None:intergenic 40.0%
!!! CTTTTTTTTTTGGGTGGGTG+TGG - chr1_4:72111133-72111152 Msa0183250:intron 40.0%
!! GGAAATTTCTAAGGTGCATC+AGG - chr1_4:72111368-72111387 Msa0183250:intron 40.0%
AATAATGCATGCTGGGCAAT+TGG - chr1_4:72111405-72111424 Msa0183250:CDS 40.0%
! ACGTATGAAGGCATATGGTA+GGG - chr1_4:72111645-72111664 Msa0183250:intron 40.0%
TCAGTTTCAAGGCTGTTACT+CGG + chr1_4:72111865-72111884 None:intergenic 40.0%
ATGCACCTGAACATACAAGT+AGG - chr1_4:72111887-72111906 Msa0183250:intron 40.0%
ACCTGAACATACAAGTAGGT+GGG - chr1_4:72111891-72111910 Msa0183250:intron 40.0%
ATTGGGAAAATTGGACGATG+TGG - chr1_4:72111930-72111949 Msa0183250:intron 40.0%
TCGGGATTGTGTTCAACTTT+GGG + chr1_4:72111959-72111978 None:intergenic 40.0%
TTCGGGATTGTGTTCAACTT+TGG + chr1_4:72111960-72111979 None:intergenic 40.0%
CAGAGTAACTGCAACTTAGT+AGG - chr1_4:72112094-72112113 Msa0183250:intron 40.0%
AAATGAAGTGCGGAAATGGT+AGG + chr1_4:72112273-72112292 None:intergenic 40.0%
AATGTGCCTCTTCTAAACTG+TGG - chr1_4:72112363-72112382 Msa0183250:intron 40.0%
CAATCTCCACAGTTTAGAAG+AGG + chr1_4:72112372-72112391 None:intergenic 40.0%
AAATGAAGTGCAGAAGTGGT+AGG + chr1_4:72112660-72112679 None:intergenic 40.0%
TGTTGAAGTCAGTCTTACCA+AGG - chr1_4:72112953-72112972 Msa0183250:intron 40.0%
TTGGATTTCCCTGCATATCT+TGG - chr1_4:72113021-72113040 Msa0183250:intron 40.0%
GAGCAAAACCAAGATATGCA+GGG + chr1_4:72113032-72113051 None:intergenic 40.0%
AGAGCAAAACCAAGATATGC+AGG + chr1_4:72113033-72113052 None:intergenic 40.0%
! TTTTGCTCTGCCACCTAATT+TGG - chr1_4:72113044-72113063 Msa0183250:intron 40.0%
ACAAGAAAACAAACCCATCG+GGG + chr1_4:72113150-72113169 None:intergenic 40.0%
ATATGTGGTGATACAAGGTC+TGG + chr1_4:72113504-72113523 None:intergenic 40.0%
AGACCTTGTATCACCACATA+TGG - chr1_4:72113503-72113522 Msa0183250:intron 40.0%
TGCATGAAATGCTCCATATG+TGG + chr1_4:72113519-72113538 None:intergenic 40.0%
GTAAGTTATCTGCCCATTTC+TGG - chr1_4:72113563-72113582 Msa0183250:intron 40.0%
! TTGGTTCGCCAGACAATAAT+TGG + chr1_4:72113615-72113634 None:intergenic 40.0%
AAGATTGGGTCATCAGAAAG+GGG + chr1_4:72113792-72113811 None:intergenic 40.0%
GAAGATTGGGTCATCAGAAA+GGG + chr1_4:72113793-72113812 None:intergenic 40.0%
TGAAGATTGGGTCATCAGAA+AGG + chr1_4:72113794-72113813 None:intergenic 40.0%
TGCGAGTCGTTACTGTAATT+GGG - chr1_4:72113817-72113836 Msa0183250:intron 40.0%
AGTGCTTGTGATCCTGTATT+TGG - chr1_4:72114361-72114380 Msa0183250:CDS 40.0%
GATGTCATCTCTTTCTTTGC+CGG - chr1_4:72114463-72114482 Msa0183250:intron 40.0%
GAGAAAGAAGATGCCTTTAG+AGG - chr1_4:72114543-72114562 Msa0183250:intron 40.0%
CATAGCACATAGACCTCTAA+AGG + chr1_4:72114559-72114578 None:intergenic 40.0%
! CTTTAGAGGTCTATGTGCTA+TGG - chr1_4:72114557-72114576 Msa0183250:intron 40.0%
TGTGTAAAGCCATTGCAAGT+TGG - chr1_4:72114705-72114724 Msa0183250:intron 40.0%
ACATACATGCCAACTTGCAA+TGG + chr1_4:72114717-72114736 None:intergenic 40.0%
TTTACACAATGAAGTCTGCC+AGG - chr1_4:72114831-72114850 Msa0183250:intron 40.0%
CTTAAATCCTGATTCCTTGG+GGG - chr1_4:72115050-72115069 Msa0183250:intron 40.0%
GTTATATAGATGCTGCGCAA+TGG - chr1_4:72115096-72115115 Msa0183250:intron 40.0%
CATTGTATCTGCATTGTCCT+TGG - chr1_4:72115203-72115222 Msa0183250:intron 40.0%
GACAACACACATAATGACCA+AGG + chr1_4:72115223-72115242 None:intergenic 40.0%
ATTGAGAAGGAGCTTAGTCT+TGG - chr1_4:72115268-72115287 Msa0183250:intron 40.0%
! TTGGTCCAATTTTATCGGTC+AGG - chr1_4:72115287-72115306 Msa0183250:intron 40.0%
! TGGTCCAATTTTATCGGTCA+GGG - chr1_4:72115288-72115307 Msa0183250:intron 40.0%
! TTAGCTTGATGATTACAGGC+AGG - chr1_4:72115335-72115354 Msa0183250:intron 40.0%
AATAAGACCTTGAAGGCTTG+TGG + chr1_4:72115366-72115385 None:intergenic 40.0%
!! GCCTTCAAGGTCTTATTTGA+CGG - chr1_4:72115369-72115388 Msa0183250:intron 40.0%
ACCGTCAAATAAGACCTTGA+AGG + chr1_4:72115373-72115392 None:intergenic 40.0%
GGGAAATGAGTTTCAACCTT+CGG - chr1_4:72115414-72115433 Msa0183250:CDS 40.0%
ATAGAGGGAGAAGATGTGAA+GGG - chr1_4:72115589-72115608 Msa0183250:exon 40.0%
ACAATGGAACAACTAATCCG+CGG + chr1_4:72115642-72115661 None:intergenic 40.0%
AGGCAACATATAGCTGAAAC+CGG + chr1_4:72115681-72115700 None:intergenic 40.0%
CAAGGAGATCTGCACCTTAT+TGG - chr1_4:72101063-72101082 Msa0183250:three_prime_UTR 45.0%
CCGCTGATAAGTCTCAGATT+TGG - chr1_4:72101113-72101132 Msa0183250:three_prime_UTR 45.0%
GAATGAAGATACCTGAGCAC+GGG + chr1_4:72101200-72101219 None:intergenic 45.0%
TGAACAGGGAATTTCTGTGG+AGG - chr1_4:72102148-72102167 Msa0183250:intron 45.0%
AATTTCTGTGGAGGTTCGAC+AGG - chr1_4:72102157-72102176 Msa0183250:intron 45.0%
AAACTGGAGGAGTTTCACAG+TGG - chr1_4:72102336-72102355 Msa0183250:intron 45.0%
GTTATAGAGAGATGAGAGGG+GGG - chr1_4:72102569-72102588 Msa0183250:intron 45.0%
TTATAGAGAGATGAGAGGGG+GGG - chr1_4:72102570-72102589 Msa0183250:intron 45.0%
ACGCCATGTGAGCTTCTATT+AGG - chr1_4:72102773-72102792 Msa0183250:intron 45.0%
TATGACTGTTGGGAAGAGGA+TGG + chr1_4:72102930-72102949 None:intergenic 45.0%
CTGTTATGACTGTTGGGAAG+AGG + chr1_4:72102934-72102953 None:intergenic 45.0%
AAGGAGGAATCTGGATGTAC+CGG + chr1_4:72102971-72102990 None:intergenic 45.0%
TTAGGACACAAGGAGGAATC+TGG + chr1_4:72102980-72102999 None:intergenic 45.0%
! CCTTTTCCCATGGTTAAGTG+AGG + chr1_4:72103361-72103380 None:intergenic 45.0%
CCTCACTTAACCATGGGAAA+AGG - chr1_4:72103358-72103377 Msa0183250:intron 45.0%
! GGTCTTATAATTAGGGACGG+AGG + chr1_4:72103611-72103630 None:intergenic 45.0%
CTACCTCCGTCCCTAAATAT+AGG + chr1_4:72103875-72103894 None:intergenic 45.0%
TTTAGGGACGGAGGTAGTAT+TGG - chr1_4:72103878-72103897 Msa0183250:intron 45.0%
ATTCTTGACACCGATGTACC+AGG - chr1_4:72104365-72104384 Msa0183250:intron 45.0%
TCCTGTGCTGTACTTACAGA+AGG + chr1_4:72104609-72104628 None:intergenic 45.0%
TTCCTCCTTCCATGAACTTG+CGG - chr1_4:72104949-72104968 Msa0183250:intron 45.0%
ATATGCCGCAAGTTCATGGA+AGG + chr1_4:72104957-72104976 None:intergenic 45.0%
GACCAGATCCTGTTGATGTT+TGG - chr1_4:72105018-72105037 Msa0183250:intron 45.0%
AGGTTTCGCCAAACATCAAC+AGG + chr1_4:72105029-72105048 None:intergenic 45.0%
GCAGTCGATGGAAATCAGAA+TGG + chr1_4:72105159-72105178 None:intergenic 45.0%
AAACCTCCAAGATAGACGGA+CGG + chr1_4:72105217-72105236 None:intergenic 45.0%
GTCCAAACCTCCAAGATAGA+CGG + chr1_4:72105221-72105240 None:intergenic 45.0%
AGGCTTACTGGAATAAGACG+GGG + chr1_4:72106174-72106193 None:intergenic 45.0%
TGAATCGCTTATTGAAGCCG+AGG - chr1_4:72106307-72106326 Msa0183250:intron 45.0%
TGAGAACCCTCTTCCTGAAA+AGG + chr1_4:72106419-72106438 None:intergenic 45.0%
TTCTCAACCTGATCGAGATC+AGG - chr1_4:72106433-72106452 Msa0183250:intron 45.0%
CAATAGGCATCAGAGTAGGA+AGG + chr1_4:72106841-72106860 None:intergenic 45.0%
ATAAAGGGAGTAACAGCACG+CGG + chr1_4:72107098-72107117 None:intergenic 45.0%
! GTGCTGTTACTCCCTTTATG+AGG - chr1_4:72107099-72107118 Msa0183250:intron 45.0%
TTTCCAACCATCATCTCCGA+CGG + chr1_4:72107168-72107187 None:intergenic 45.0%
TCTTTATCCTCATCTGCCAG+AGG - chr1_4:72107244-72107263 Msa0183250:intron 45.0%
!! ATGTGTGTGGGTTAGGGTAT+CGG - chr1_4:72108457-72108476 Msa0183250:intron 45.0%
AAGCACCTGATGGTTGCATT+TGG - chr1_4:72108742-72108761 Msa0183250:intron 45.0%
AGCACCTGATGGTTGCATTT+GGG - chr1_4:72108743-72108762 Msa0183250:intron 45.0%
GAACTCTAGCTGAAGCTGTT+GGG - chr1_4:72108967-72108986 Msa0183250:intron 45.0%
AACTCTAGCTGAAGCTGTTG+GGG - chr1_4:72108968-72108987 Msa0183250:intron 45.0%
TGCCACCGTTAATTGAGAAG+TGG - chr1_4:72109122-72109141 Msa0183250:intron 45.0%
! TGCCACTTCTCAATTAACGG+TGG + chr1_4:72109127-72109146 None:intergenic 45.0%
! GATGTGAAGCACTCTAGAAG+TGG + chr1_4:72109181-72109200 None:intergenic 45.0%
TGAGGACTTAGTGCCACATT+TGG - chr1_4:72109356-72109375 Msa0183250:CDS 45.0%
CTTAGTGCCACATTTGGTAC+TGG - chr1_4:72109362-72109381 Msa0183250:CDS 45.0%
!! TGCCACATTTGGTACTGGTT+AGG - chr1_4:72109367-72109386 Msa0183250:CDS 45.0%
TGCCTAACCAGTACCAAATG+TGG + chr1_4:72109372-72109391 None:intergenic 45.0%
! AATGGGCTTATGCTAGCAGT+TGG - chr1_4:72109540-72109559 Msa0183250:intron 45.0%
TTGCTGAACCTGTGTTTAGG+AGG - chr1_4:72109737-72109756 Msa0183250:intron 45.0%
CTAGAACCTTAGCCAATGTC+TGG + chr1_4:72109783-72109802 None:intergenic 45.0%
TGGCAGTGGAATAGAGAGTT+TGG - chr1_4:72110068-72110087 Msa0183250:intron 45.0%
!! GAGATTCGGGTTGGCAATAT+GGG + chr1_4:72110557-72110576 None:intergenic 45.0%
!! AGAGATTCGGGTTGGCAATA+TGG + chr1_4:72110558-72110577 None:intergenic 45.0%
CAAACAGCATCCGAAAGTTC+AGG + chr1_4:72110794-72110813 None:intergenic 45.0%
!!! TTTTTTTTGGGTGGGTGTGG+CGG - chr1_4:72111136-72111155 Msa0183250:intron 45.0%
TGAACTTGCCTCCAAACAAC+TGG - chr1_4:72111268-72111287 Msa0183250:intron 45.0%
CACACATACCAGTTGTTTGG+AGG + chr1_4:72111279-72111298 None:intergenic 45.0%
CCAGCATGCATTATTTGCCA+CGG + chr1_4:72111400-72111419 None:intergenic 45.0%
CGTGGCAAATAATGCATGCT+GGG - chr1_4:72111398-72111417 Msa0183250:CDS 45.0%
! CACGTATGAAGGCATATGGT+AGG - chr1_4:72111644-72111663 Msa0183250:intron 45.0%
CAGGTGCATTCTCAGTTTCA+AGG + chr1_4:72111876-72111895 None:intergenic 45.0%
CACCTGAACATACAAGTAGG+TGG - chr1_4:72111890-72111909 Msa0183250:intron 45.0%
ACCCACCTACTTGTATGTTC+AGG + chr1_4:72111895-72111914 None:intergenic 45.0%
GGATTGTGTTCAACTTTGGG+TGG + chr1_4:72111956-72111975 None:intergenic 45.0%
TATATGCTCTTGGTGGGGTT+TGG - chr1_4:72112606-72112625 Msa0183250:intron 45.0%
ATATGCTCTTGGTGGGGTTT+GGG - chr1_4:72112607-72112626 Msa0183250:intron 45.0%
TACCAAGGCCAGACTTGAAA+TGG - chr1_4:72112968-72112987 Msa0183250:intron 45.0%
! TCTGTTTCTTCTTTCCCCGA+TGG - chr1_4:72113133-72113152 Msa0183250:intron 45.0%
! CTGTTTCTTCTTTCCCCGAT+GGG - chr1_4:72113134-72113153 Msa0183250:intron 45.0%
CATGCTGAAGAATTGGTACC+AGG + chr1_4:72113330-72113349 None:intergenic 45.0%
ACCAATTCTTCAGCATGCAG+AGG - chr1_4:72113333-72113352 Msa0183250:intron 45.0%
ACCTCTGCATGCTGAAGAAT+TGG + chr1_4:72113337-72113356 None:intergenic 45.0%
ATAGTGCAATAACACTGGGG+AGG - chr1_4:72113463-72113482 Msa0183250:intron 45.0%
GCTCCATATGTGGTGATACA+AGG + chr1_4:72113509-72113528 None:intergenic 45.0%
! TGGAGCATTTCATGCAACCT+TGG - chr1_4:72113523-72113542 Msa0183250:intron 45.0%
!! ATTGACAGAGCATTGCACCA+AGG + chr1_4:72113543-72113562 None:intergenic 45.0%
!! ATCAAGCACTGAGGCTGTAA+GGG - chr1_4:72113656-72113675 Msa0183250:intron 45.0%
CGACTCGCACATTGAAGATT+GGG + chr1_4:72113806-72113825 None:intergenic 45.0%
ACGACTCGCACATTGAAGAT+TGG + chr1_4:72113807-72113826 None:intergenic 45.0%
GTGCGAGTCGTTACTGTAAT+TGG - chr1_4:72113816-72113835 Msa0183250:intron 45.0%
! CCGTACAAGTTGCTTTGGTT+GGG + chr1_4:72114004-72114023 None:intergenic 45.0%
CCCAACCAAAGCAACTTGTA+CGG - chr1_4:72114001-72114020 Msa0183250:intron 45.0%
CCAACCAAAGCAACTTGTAC+GGG - chr1_4:72114002-72114021 Msa0183250:intron 45.0%
CAACCAAAGCAACTTGTACG+GGG - chr1_4:72114003-72114022 Msa0183250:intron 45.0%
! CTCGTCAAAACTAGCCTGTA+AGG - chr1_4:72114208-72114227 Msa0183250:CDS 45.0%
! TCAAAACTAGCCTGTAAGGC+TGG - chr1_4:72114212-72114231 Msa0183250:CDS 45.0%
! CAAAACTAGCCTGTAAGGCT+GGG - chr1_4:72114213-72114232 Msa0183250:CDS 45.0%
! AAAACTAGCCTGTAAGGCTG+GGG - chr1_4:72114214-72114233 Msa0183250:CDS 45.0%
ACTTAGAGCTCCAGAAGGAT+TGG + chr1_4:72114672-72114691 None:intergenic 45.0%
GTTTATACCCATGCAAGACC+TGG + chr1_4:72114852-72114871 None:intergenic 45.0%
GGTCTTGCATGGGTATAAAC+AGG - chr1_4:72114852-72114871 Msa0183250:intron 45.0%
!! GTTAGTGTTGCTTGTCTGCT+GGG - chr1_4:72114874-72114893 Msa0183250:intron 45.0%
AAATTCTCCCCCAAGGAATC+AGG + chr1_4:72115060-72115079 None:intergenic 45.0%
CATCTTCTCCCTCTATCTAG+TGG + chr1_4:72115585-72115604 None:intergenic 45.0%
GATAGAGGGAGAAGATGTGA+AGG - chr1_4:72115588-72115607 Msa0183250:exon 45.0%
TAGAGGGAGAAGATGTGAAG+GGG - chr1_4:72115590-72115609 Msa0183250:exon 45.0%
CTGACAACTTGTAGTTTCCG+CGG - chr1_4:72115622-72115641 Msa0183250:five_prime_UTR 45.0%
AGCTATATGTTGCCTTAGGC+AGG - chr1_4:72115686-72115705 Msa0183250:five_prime_UTR 45.0%
GCTATATGTTGCCTTAGGCA+GGG - chr1_4:72115687-72115706 Msa0183250:five_prime_UTR 45.0%
!! AATTTATTAAAACAAAAATT+TGG + chr1_4:72107823-72107842 None:intergenic 5.0%
!! ATTATTGAATTTAATAAAAA+GGG + chr1_4:72113724-72113743 None:intergenic 5.0%
AAACCTCAATTCGTGCACGG+CGG - chr1_4:72100981-72101000 Msa0183250:three_prime_UTR 50.0%
! AATTCGTGCACGGCGGATTT+CGG - chr1_4:72100988-72101007 Msa0183250:three_prime_UTR 50.0%
ACCACAAGAGCAAGGCTTCA+AGG - chr1_4:72101045-72101064 Msa0183250:three_prime_UTR 50.0%
TCCTTGAAGCCTTGCTCTTG+TGG + chr1_4:72101049-72101068 None:intergenic 50.0%
CACGGGAGAAGATGAAGATG+AGG + chr1_4:72101183-72101202 None:intergenic 50.0%
TGCAACTTGCAACGCTATCC+AGG + chr1_4:72101514-72101533 None:intergenic 50.0%
GCCATTTATGGTTTGACGCG+TGG - chr1_4:72101799-72101818 Msa0183250:intron 50.0%
GCCACGCGTCAAACCATAAA+TGG + chr1_4:72101803-72101822 None:intergenic 50.0%
! TCCCTGACACTATGCTGCTT+TGG - chr1_4:72102114-72102133 Msa0183250:intron 50.0%
GCCAAAGCAGCATAGTGTCA+GGG + chr1_4:72102118-72102137 None:intergenic 50.0%
TGCCAAAGCAGCATAGTGTC+AGG + chr1_4:72102119-72102138 None:intergenic 50.0%
TCAGAGTTGCTGCCTTGTCT+CGG - chr1_4:72102257-72102276 Msa0183250:intron 50.0%
TTATCTGCTGCACCGAGACA+AGG + chr1_4:72102272-72102291 None:intergenic 50.0%
GCAAGCCCTTGTAAGTTGCT+TGG - chr1_4:72102370-72102389 Msa0183250:intron 50.0%
CTAGATGTGGCTTCGTCTGT+AGG - chr1_4:72103109-72103128 Msa0183250:CDS 50.0%
GTAGATTGAGGCAGAGGATG+TGG + chr1_4:72103218-72103237 None:intergenic 50.0%
! GGTAGATGGACTCGCTAAAC+AGG - chr1_4:72103244-72103263 Msa0183250:intron 50.0%
CAGGACGAGTTAGTGTGTTC+AGG - chr1_4:72103308-72103327 Msa0183250:intron 50.0%
GCTCCTATATTTAGGGACGG+AGG - chr1_4:72103869-72103888 Msa0183250:intron 50.0%
CTCTGCTAAGCCTGGTACAT+CGG + chr1_4:72104378-72104397 None:intergenic 50.0%
ATGTACCAGGCTTAGCAGAG+CGG - chr1_4:72104378-72104397 Msa0183250:intron 50.0%
GCCTTCTGTAAGTACAGCAC+AGG - chr1_4:72104605-72104624 Msa0183250:intron 50.0%
ATGACCCTACTGCAGAAGTG+CGG - chr1_4:72104764-72104783 Msa0183250:intron 50.0%
ACTTCCGCACTTCTGCAGTA+GGG + chr1_4:72104771-72104790 None:intergenic 50.0%
AACTTCCGCACTTCTGCAGT+AGG + chr1_4:72104772-72104791 None:intergenic 50.0%
! TACTGCAGAAGTGCGGAAGT+TGG - chr1_4:72104771-72104790 Msa0183250:intron 50.0%
CGCCAAACATCAACAGGATC+TGG + chr1_4:72105023-72105042 None:intergenic 50.0%
! TCTGATTTCCATCGACTGCC+AGG - chr1_4:72105160-72105179 Msa0183250:intron 50.0%
GAACAAATGCTGCGCAAACC+TGG + chr1_4:72105181-72105200 None:intergenic 50.0%
TGAAGTCCGTCCGTCTATCT+TGG - chr1_4:72105208-72105227 Msa0183250:CDS 50.0%
GTCCGTCTATCTTGGAGGTT+TGG - chr1_4:72105216-72105235 Msa0183250:CDS 50.0%
CCTTAGATGTGGCTGCAGTA+TGG + chr1_4:72105631-72105650 None:intergenic 50.0%
CCATACTGCAGCCACATCTA+AGG - chr1_4:72105628-72105647 Msa0183250:CDS 50.0%
CAAGGACGCAGATGAAGAAG+TGG - chr1_4:72105680-72105699 Msa0183250:CDS 50.0%
GGAAAGGGGAAGAGTTTCGT+CGG - chr1_4:72105854-72105873 Msa0183250:intron 50.0%
GAAAGGGGAAGAGTTTCGTC+GGG - chr1_4:72105855-72105874 Msa0183250:intron 50.0%
AAGCAGACCTGATCTCGATC+AGG + chr1_4:72106443-72106462 None:intergenic 50.0%
GTAACAGCACGCGGAGAAAA+TGG + chr1_4:72107089-72107108 None:intergenic 50.0%
ATCTCCGACGGTTGACAACT+TGG + chr1_4:72107156-72107175 None:intergenic 50.0%
TTGTCAACCGTCGGAGATGA+TGG - chr1_4:72107158-72107177 Msa0183250:intron 50.0%
TATGGCACCAAGTGCCAAGA+CGG + chr1_4:72107204-72107223 None:intergenic 50.0%
GACAATACCTCTGGCAGATG+AGG + chr1_4:72107254-72107273 None:intergenic 50.0%
!! TGTGTGTGGGTTAGGGTATC+GGG - chr1_4:72108458-72108477 Msa0183250:intron 50.0%
GGAACTCTAGCTGAAGCTGT+TGG - chr1_4:72108966-72108985 Msa0183250:intron 50.0%
! TCAGACCCAGACATTGGCTA+AGG - chr1_4:72109774-72109793 Msa0183250:CDS 50.0%
TCTGGACTAACAGAGGGTCT+TGG - chr1_4:72110048-72110067 Msa0183250:CDS 50.0%
TCGAGCAAGGTCTCCAAGTA+AGG + chr1_4:72110975-72110994 None:intergenic 50.0%
ACCATAGGCAGTGCATGTGA+GGG + chr1_4:72111035-72111054 None:intergenic 50.0%
!!! TTTTTTTGGGTGGGTGTGGC+GGG - chr1_4:72111137-72111156 Msa0183250:intron 50.0%
! GTGATTTGGCTAGGTGTGTG+TGG - chr1_4:72111214-72111233 Msa0183250:intron 50.0%
GCGCACACATACCAGTTGTT+TGG + chr1_4:72111282-72111301 None:intergenic 50.0%
CCGTGGCAAATAATGCATGC+TGG - chr1_4:72111397-72111416 Msa0183250:CDS 50.0%
! GGCATATGGTAGGGAAGTGT+CGG - chr1_4:72111654-72111673 Msa0183250:intron 50.0%
!! GCATATGGTAGGGAAGTGTC+GGG - chr1_4:72111655-72111674 Msa0183250:intron 50.0%
ATAGTGTATGAGCGGGTCAG+AGG + chr1_4:72112237-72112256 None:intergenic 50.0%
! CTCCATTTCAAGTCTGGCCT+TGG + chr1_4:72112973-72112992 None:intergenic 50.0%
TACAGCCTCAGTGCTTGATC+TGG + chr1_4:72113655-72113674 None:intergenic 50.0%
!! GATCAAGCACTGAGGCTGTA+AGG - chr1_4:72113655-72113674 Msa0183250:intron 50.0%
!! TCAAGCACTGAGGCTGTAAG+GGG - chr1_4:72113657-72113676 Msa0183250:intron 50.0%
! CCCGTACAAGTTGCTTTGGT+TGG + chr1_4:72114005-72114024 None:intergenic 50.0%
CTTCCCCGTACAAGTTGCTT+TGG + chr1_4:72114009-72114028 None:intergenic 50.0%
CAAAGCAACTTGTACGGGGA+AGG - chr1_4:72114007-72114026 Msa0183250:intron 50.0%
ACTTCCCTCATGTCCAACAG+CGG - chr1_4:72114092-72114111 Msa0183250:intron 50.0%
ATGTCCGCTGTTGGACATGA+GGG + chr1_4:72114099-72114118 None:intergenic 50.0%
CAGGTCAAAGCCAATCCTTC+TGG - chr1_4:72114659-72114678 Msa0183250:intron 50.0%
AGCGAACTTAGAGCTCCAGA+AGG + chr1_4:72114677-72114696 None:intergenic 50.0%
AAGTCTGCCAGGTCTTGCAT+GGG - chr1_4:72114842-72114861 Msa0183250:intron 50.0%
!! GGTTAGTGTTGCTTGTCTGC+TGG - chr1_4:72114873-72114892 Msa0183250:intron 50.0%
GCTGGGAACACATCTTCCTT+AGG - chr1_4:72114891-72114910 Msa0183250:intron 50.0%
GGACCAGTGTATGTCTGCAT+TGG - chr1_4:72115125-72115144 Msa0183250:intron 50.0%
GCTCCAATGCAGACATACAC+TGG + chr1_4:72115131-72115150 None:intergenic 50.0%
CGCGGAAACTACAAGTTGTC+AGG + chr1_4:72115624-72115643 None:intergenic 50.0%
TTCAAACGATGCCCTGCCTA+AGG + chr1_4:72115701-72115720 None:intergenic 50.0%
AATCCGCCGTGCACGAATTG+AGG + chr1_4:72100987-72101006 None:intergenic 55.0%
TGCTCTTGTGGTTGCCACGA+TGG + chr1_4:72101037-72101056 None:intergenic 55.0%
TCGTGGCAACCACAAGAGCA+AGG - chr1_4:72101037-72101056 Msa0183250:three_prime_UTR 55.0%
CTTCATCTTCTCCCGTGCTC+AGG - chr1_4:72101186-72101205 Msa0183250:three_prime_UTR 55.0%
!! GCTGTGGCACGTGCCATTTA+TGG - chr1_4:72101787-72101806 Msa0183250:intron 55.0%
TTGGTGCGTCTATGGGTGCA+TGG - chr1_4:72102738-72102757 Msa0183250:intron 55.0%
GGATAGAGAGGCTGCATCAC+TGG - chr1_4:72104206-72104225 Msa0183250:intron 55.0%
TGCCGCAAGTTCATGGAAGG+AGG + chr1_4:72104954-72104973 None:intergenic 55.0%
AGTCCGTCCGTCTATCTTGG+AGG - chr1_4:72105211-72105230 Msa0183250:CDS 55.0%
TGGTGCTTGCTCGTCTGAGT+AGG + chr1_4:72105535-72105554 None:intergenic 55.0%
CGAGCAAGCACCAAGTCTAG+TGG - chr1_4:72105542-72105561 Msa0183250:intron 55.0%
CAGGCCAAGTTGTCAACCGT+CGG - chr1_4:72107149-72107168 Msa0183250:intron 55.0%
! CAACCGTCGGAGATGATGGT+TGG - chr1_4:72107162-72107181 Msa0183250:intron 55.0%
AGAAAGGGAAGCTGCCGTCT+TGG - chr1_4:72107187-72107206 Msa0183250:intron 55.0%
!! GTCTTGGCACTTGGTGCCAT+AGG - chr1_4:72107203-72107222 Msa0183250:intron 55.0%
ATTGATGCACCCCTCGCCTA+TGG + chr1_4:72107222-72107241 None:intergenic 55.0%
! ATAGGCGAGGGGTGCATCAA+TGG - chr1_4:72107221-72107240 Msa0183250:intron 55.0%
!! TTAGGGTATCGGGCATCCCA+AGG - chr1_4:72108468-72108487 Msa0183250:intron 55.0%
!! TAGGGTATCGGGCATCCCAA+GGG - chr1_4:72108469-72108488 Msa0183250:intron 55.0%
TGTTGGGGCAGAGCTGAATC+AGG - chr1_4:72108983-72109002 Msa0183250:intron 55.0%
!! TTGTTACAGGCACTGGGTCC+CGG - chr1_4:72109703-72109722 Msa0183250:intron 55.0%
AGCTGGGGCTCAGTATGACA+AGG - chr1_4:72109996-72110015 Msa0183250:intron 55.0%
CTAACAGAGGGTCTTGGCAG+TGG - chr1_4:72110054-72110073 Msa0183250:CDS 55.0%
!! CGGGTTGGCAATATGGGTGA+TGG + chr1_4:72110551-72110570 None:intergenic 55.0%
GACCATAGGCAGTGCATGTG+AGG + chr1_4:72111036-72111055 None:intergenic 55.0%
! GGTGCATCAGGCTATTTCCG+TGG - chr1_4:72111380-72111399 Msa0183250:CDS 55.0%
!! ATGGTAGGGAAGTGTCGGGT+AGG - chr1_4:72111659-72111678 Msa0183250:intron 55.0%
!! TGGTAGGGAAGTGTCGGGTA+GGG - chr1_4:72111660-72111679 Msa0183250:intron 55.0%
!! GAAGTGTCGGGTAGGGTAGA+TGG - chr1_4:72111667-72111686 Msa0183250:intron 55.0%
TAACACTGGGGAGGCTTGCA+TGG - chr1_4:72113472-72113491 Msa0183250:intron 55.0%
AACACTGGGGAGGCTTGCAT+GGG - chr1_4:72113473-72113492 Msa0183250:intron 55.0%
! TGTGGCCAGATCAAGCACTG+AGG - chr1_4:72113647-72113666 Msa0183250:intron 55.0%
GATGTCCGCTGTTGGACATG+AGG + chr1_4:72114100-72114119 None:intergenic 55.0%
CATGTCCAACAGCGGACATC+TGG - chr1_4:72114100-72114119 Msa0183250:intron 55.0%
GTGGGTGGCCTAACACATCT+TGG - chr1_4:72114140-72114159 Msa0183250:intron 55.0%
GAAGTCTGCCAGGTCTTGCA+TGG - chr1_4:72114841-72114860 Msa0183250:intron 55.0%
AGATGCTGCGCAATGGAGCA+TGG - chr1_4:72115103-72115122 Msa0183250:intron 55.0%
GATGCTGCGCAATGGAGCAT+GGG - chr1_4:72115104-72115123 Msa0183250:intron 55.0%
GGCAGTTCCACAAGCCTTCA+AGG - chr1_4:72115356-72115375 Msa0183250:intron 55.0%
! ACGGCGGATTTCGGCAACGA+TGG - chr1_4:72100997-72101016 Msa0183250:three_prime_UTR 60.0%
GCGGATTTCGGCAACGATGG+CGG - chr1_4:72101000-72101019 Msa0183250:three_prime_UTR 60.0%
! GATTTCGGCAACGATGGCGG+CGG - chr1_4:72101003-72101022 Msa0183250:three_prime_UTR 60.0%
TGCGCAAACCTGGCAGTCGA+TGG + chr1_4:72105171-72105190 None:intergenic 60.0%
GAAGCTGCCGTCTTGGCACT+TGG - chr1_4:72107194-72107213 Msa0183250:intron 60.0%
!! GCACTTGGTGCCATAGGCGA+GGG - chr1_4:72107209-72107228 Msa0183250:intron 60.0%
!! CACTTGGTGCCATAGGCGAG+GGG - chr1_4:72107210-72107229 Msa0183250:intron 60.0%
GTAGGAGGCTGCTGAAGAGC+TGG - chr1_4:72108696-72108715 Msa0183250:intron 60.0%
AGGCCAATCCTGCTGCAGCT+GGG - chr1_4:72109980-72109999 Msa0183250:intron 60.0%
GCCCTCACATGCACTGCCTA+TGG - chr1_4:72111031-72111050 Msa0183250:intron 60.0%
! AGCACTGAGGCTGTAAGGGG+AGG - chr1_4:72113660-72113679 Msa0183250:intron 60.0%
GTGTTAGGCCACCCACCATC+AGG + chr1_4:72114136-72114155 None:intergenic 60.0%
GGAGTCATCCCCAGCCTTAC+AGG + chr1_4:72114225-72114244 None:intergenic 60.0%
GTGGAGGTTCGACAGGCTGC+AGG - chr1_4:72102164-72102183 Msa0183250:intron 65.0%
ATGGGCCGCTCTGCTAAGCC+TGG + chr1_4:72104386-72104405 None:intergenic 65.0%
!! GGCACTTGGTGCCATAGGCG+AGG - chr1_4:72107208-72107227 Msa0183250:intron 65.0%
TGAAGAGCTGGCACCGCGCT+TGG - chr1_4:72108708-72108727 Msa0183250:intron 65.0%
CAGGCCAATCCTGCTGCAGC+TGG - chr1_4:72109979-72109998 Msa0183250:intron 65.0%
GGCCAATCCTGCTGCAGCTG+GGG - chr1_4:72109981-72110000 Msa0183250:intron 65.0%
AGCCCCAGCTGCAGCAGGAT+TGG + chr1_4:72109986-72110005 None:intergenic 65.0%
TACTGAGCCCCAGCTGCAGC+AGG + chr1_4:72109991-72110010 None:intergenic 65.0%
! TTTGGGTGGGTGTGGCGGGA+CGG - chr1_4:72111141-72111160 Msa0183250:intron 65.0%
CGGGTCCAGATGTCCGCTGT+TGG + chr1_4:72114108-72114127 None:intergenic 65.0%
AGCGGACATCTGGACCCGAG+TGG - chr1_4:72114110-72114129 Msa0183250:intron 65.0%
TCTGGACCCGAGTGGCCTGA+TGG - chr1_4:72114118-72114137 Msa0183250:intron 65.0%
GACCCGAGTGGCCTGATGGT+GGG - chr1_4:72114122-72114141 Msa0183250:intron 65.0%
CACCCACCATCAGGCCACTC+GGG + chr1_4:72114127-72114146 None:intergenic 65.0%
CCACCCACCATCAGGCCACT+CGG + chr1_4:72114128-72114147 None:intergenic 65.0%
! TTCGGCAACGATGGCGGCGG+CGG - chr1_4:72101006-72101025 Msa0183250:three_prime_UTR 70.0%
GGACCCGAGTGGCCTGATGG+TGG - chr1_4:72114121-72114140 Msa0183250:intron 70.0%
!! CCGAGTGGCCTGATGGTGGG+TGG - chr1_4:72114125-72114144 Msa0183250:intron 70.0%
CGGCGGCGGTGACACCATCG+TGG - chr1_4:72101020-72101039 Msa0183250:three_prime_UTR 75.0%
! TGGGTGTGGCGGGACGGAGC+AGG - chr1_4:72111147-72111166 Msa0183250:intron 75.0%
! GGGTGTGGCGGGACGGAGCA+GGG - chr1_4:72111148-72111167 Msa0183250:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 72100814 72115792 72100814 ID=Msa0183250;Name=Msa0183250
chr1_4 mRNA 72100814 72115792 72100814 ID=Msa0183250-mRNA-1;Parent=Msa0183250;Name=Msa0183250-mRNA-1;_AED=0.06;_eAED=0.06;_QI=202|1|1|1|1|1|29|604|895
chr1_4 exon 72100814 72101501 72100814 ID=Msa0183250-mRNA-1:exon:24327;Parent=Msa0183250-mRNA-1
chr1_4 exon 72101733 72101792 72101733 ID=Msa0183250-mRNA-1:exon:24326;Parent=Msa0183250-mRNA-1
chr1_4 exon 72101876 72101944 72101876 ID=Msa0183250-mRNA-1:exon:24325;Parent=Msa0183250-mRNA-1
chr1_4 exon 72102028 72102079 72102028 ID=Msa0183250-mRNA-1:exon:24324;Parent=Msa0183250-mRNA-1
chr1_4 exon 72103044 72103168 72103044 ID=Msa0183250-mRNA-1:exon:24323;Parent=Msa0183250-mRNA-1
chr1_4 exon 72103252 72103323 72103252 ID=Msa0183250-mRNA-1:exon:24322;Parent=Msa0183250-mRNA-1
chr1_4 exon 72105163 72105237 72105163 ID=Msa0183250-mRNA-1:exon:24321;Parent=Msa0183250-mRNA-1
chr1_4 exon 72105317 72105379 72105317 ID=Msa0183250-mRNA-1:exon:24320;Parent=Msa0183250-mRNA-1
chr1_4 exon 72105612 72105713 72105612 ID=Msa0183250-mRNA-1:exon:24319;Parent=Msa0183250-mRNA-1
chr1_4 exon 72106517 72106624 72106517 ID=Msa0183250-mRNA-1:exon:24318;Parent=Msa0183250-mRNA-1
chr1_4 exon 72106811 72106894 72106811 ID=Msa0183250-mRNA-1:exon:24317;Parent=Msa0183250-mRNA-1
chr1_4 exon 72107396 72107506 72107396 ID=Msa0183250-mRNA-1:exon:24316;Parent=Msa0183250-mRNA-1
chr1_4 exon 72107602 72107673 72107602 ID=Msa0183250-mRNA-1:exon:24315;Parent=Msa0183250-mRNA-1
chr1_4 exon 72107832 72107906 72107832 ID=Msa0183250-mRNA-1:exon:24314;Parent=Msa0183250-mRNA-1
chr1_4 exon 72108009 72108134 72108009 ID=Msa0183250-mRNA-1:exon:24313;Parent=Msa0183250-mRNA-1
chr1_4 exon 72108594 72108692 72108594 ID=Msa0183250-mRNA-1:exon:24312;Parent=Msa0183250-mRNA-1
chr1_4 exon 72109341 72109454 72109341 ID=Msa0183250-mRNA-1:exon:24311;Parent=Msa0183250-mRNA-1
chr1_4 exon 72109741 72109857 72109741 ID=Msa0183250-mRNA-1:exon:24310;Parent=Msa0183250-mRNA-1
chr1_4 exon 72110018 72110077 72110018 ID=Msa0183250-mRNA-1:exon:24309;Parent=Msa0183250-mRNA-1
chr1_4 exon 72110152 72110181 72110152 ID=Msa0183250-mRNA-1:exon:24308;Parent=Msa0183250-mRNA-1
chr1_4 exon 72110278 72110334 72110278 ID=Msa0183250-mRNA-1:exon:24307;Parent=Msa0183250-mRNA-1
chr1_4 exon 72110421 72110487 72110421 ID=Msa0183250-mRNA-1:exon:24306;Parent=Msa0183250-mRNA-1
chr1_4 exon 72110882 72110967 72110882 ID=Msa0183250-mRNA-1:exon:24305;Parent=Msa0183250-mRNA-1
chr1_4 exon 72111374 72111424 72111374 ID=Msa0183250-mRNA-1:exon:24304;Parent=Msa0183250-mRNA-1
chr1_4 exon 72111814 72111894 72111814 ID=Msa0183250-mRNA-1:exon:24303;Parent=Msa0183250-mRNA-1
chr1_4 exon 72111995 72112072 72111995 ID=Msa0183250-mRNA-1:exon:24302;Parent=Msa0183250-mRNA-1
chr1_4 exon 72112173 72112262 72112173 ID=Msa0183250-mRNA-1:exon:24301;Parent=Msa0183250-mRNA-1
chr1_4 exon 72114164 72114451 72114164 ID=Msa0183250-mRNA-1:exon:24300;Parent=Msa0183250-mRNA-1
chr1_4 exon 72115399 72115792 72115399 ID=Msa0183250-mRNA-1:exon:24299;Parent=Msa0183250-mRNA-1
chr1_4 five_prime_UTR 72115591 72115792 72115591 ID=Msa0183250-mRNA-1:five_prime_utr;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72115399 72115590 72115399 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72114164 72114451 72114164 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72112173 72112262 72112173 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72111995 72112072 72111995 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72111814 72111894 72111814 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72111374 72111424 72111374 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72110882 72110967 72110882 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72110421 72110487 72110421 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72110278 72110334 72110278 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72110152 72110181 72110152 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72110018 72110077 72110018 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72109741 72109857 72109741 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72109341 72109454 72109341 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72108594 72108692 72108594 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72108009 72108134 72108009 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72107832 72107906 72107832 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72107602 72107673 72107602 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72107396 72107506 72107396 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72106811 72106894 72106811 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72106517 72106624 72106517 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72105612 72105713 72105612 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72105317 72105379 72105317 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72105163 72105237 72105163 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72103252 72103323 72103252 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72103044 72103168 72103044 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72102028 72102079 72102028 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72101876 72101944 72101876 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72101733 72101792 72101733 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 CDS 72101418 72101501 72101418 ID=Msa0183250-mRNA-1:cds;Parent=Msa0183250-mRNA-1
chr1_4 three_prime_UTR 72100814 72101417 72100814 ID=Msa0183250-mRNA-1:three_prime_utr;Parent=Msa0183250-mRNA-1
Gene Sequence

>Msa0183250

ATGGCGGCGGCGGTGACACCATCGTGGCAACCACAAGAGCAAGGCTTCAAGGAGATCTGCACCTTATTGGAGCAACAAATTTCTCATTCATCTTCTTCCGCTGATAAGTCTCAGATTTGGAACCAAATTCAACAATATTCCAATCTTCCTGACTTCAACAATTACCTCATCTTCATCTTCTCCCGTGCTCAGGGAATTTCTGTGGAGGTTCGACAGGCTGCAGGTTTATATCTGAAGAATAACCTGAGGAATGTATACAATTTAATGCAGCCTGAATACCAACAATACGTGAAATCAGAGTTGCTGCCTTGTCTCGGTGCAGCAGATAAACACATAAGGTCTACGACTGGAACTATTATCAGTGTTGTTGTTCAAACTGGAGGAGTTTCACAGTGGCCCGAATTATTGCAAGCCCTTGTAAGTTGCTTGGACAGTAGTGATTTAAATCACATGGAAGGTGCAATGGATGCATTATCCAAGATTTGTGAAGATGTTCCCCAAATTCTTGACACCGATGTACCAGGCTTAGCAGAGCGGCCCATCAATATATTTCTTCCCAGATTATTTAGGTTTTTCCAATCACCTCACGCTTCATTAAGAAAGCTATCGTTGGGTTCTGTTAATCAATACATTATGTTGATGCCTTCTGCCTTATATGTATCCATGGATCAATATCTTCAAGGTCTGTTTATTCTTGCAAATGACCCTACTGCAGAAGTGCGGAAGTTGGTTTGCGCAGCATTTGTTCAGCTGATTGAAGTCCGTCCGTCTATCTTGGAGCCACATCTAAGGAATGTGATCGAGTATATGTTGCAAGTCAACAAGGACGCAGATGAAGAAGTGGCTCTCGAATCCTGTGAATTTTGGTCTGCATATTGTGATGCTCAAATGCCACCAGAAAACTTGAGAGAATTCTTGCCCCGTCTTATTCCAATATTGTTGTCAAACATGGCTTATGCAGATGATGATGAATCGCTTATTGAAGCCGAGGAAGAGGGTTCTCAACCTGATCGAGATCAGGATCTTAAACCTCGATTTCATGTATCAAGGTTTCATGGATCAGATGATGCAGAAGATGATGATGATGACGATGTTGTCAACACATGGAATTTACGGAAATGTAGTGCAGCTGCTCTTGATATTCTCTCAAACGTCTTTGGAGATGAGATCCTTCCTACTCTGATGCCTATTGTTGAGGCCAAGTTGTCAACCGTCGGAGATGATGGTTGGAAAGAAAGGGAAGCTGCCGTCTTGGCACTTGGTGCCATAGGCGAGGGGTGCATCAATGGTCTTTATCCTCATCTGCCAGAGATTGTGGCATTTCTTATCCCTCTTCTTGATGATAAGTTTCCCCTGATACGAAGTATTTCATGCTGGACAGTATCTCGGTTTAGCAAATTTATTATTCAGGGTATCGGGCATCCCAAGGGTTACGAACAATTTGACAACGTTCTTATGGGTCTTCTTCGAAGAATTTTGGATGATAATAAGCGTGTACAGGAGGCCGCTTGTTCTGCTTTTGCAACACTAGAAGAGGAGGCTGCTGAAGAGCTGGCACCGCGCTTGGAAATCATATTAAAGCACCTGATGGTTGCATTTGGGAAATATCAGAGGCGAAACCTCAGAATTGTATATGATGCTGTTGGAACTCTAGCTGAAGCTGTTGGGGCAGAGCTGAATCAGCCTGTTTATCTTGACATTCTCATGCCACCGTTAATTGAGAAGTGGCAGCAACTTTCAAATTCAGACAAAGATCTCTTTCCACTTCTAGAGTGCTTCACATCTATTGCACACGCACTGGGTCCCGGATTCACTCAATTTGCTGAACCTGTGTTTAGGAGGTGCATAAACATAATTCAGACCCAGACATTGGCTAAGGCCAATCCTGCTGCAGCTGGGGCTCAGTATGACAAGGAATTCATTGTATGCTCTCTTGATTTGCTTTCTGGACTAACAGAGGGTCTTGGCAGTGGAATAGAGAGTTTGGTTTCACAATGTTCTTTGAGGGACCTACTTTTGCAATGTTGTACTGATGATGCTCACGATGTTCGCCAAAGTGCATTTGCCTTACTTGGAGACCTTGCTCGAGTGTGTGTGGTTCATTTGCACCCTCGTTTGTCTGAAATTCTTGAACTTGCCTCCAAACAACTGGAAATTTCTAAGGTGCATCAGGCTATTTCCGTGGCAAATAATGCATGCTGGGCAATTGGAGAATTAGCAGTTAAGGTTCGTCAAGAAATTTCTCCGTTTGTTTTAAGTGTAATTTCATGCCTGGTACCAATTCTTCAGCATGCAGAGGGACTCAACAAGTCACTTATAGAAAATAGTGCAATAACACTGGGGAGGCTTGCATGGGTCTGTCCAGACCTTGTATCACCACATATGGAGCATTTCATGCAACCTTGGTGCAATGCTCTGTCAATGATACGAGATGATGTTGAGAAAGAAGATGCCTTTAGAGGTCTATGTGCTATGGTCAAAGCCAATCCTTCTGGAGCTCTAAGTTCGCTTGTTTATATGTGTAAAGCCATTGCAAGTTGGCATGAAATAAGGAGTGAAGATTTACACAATGAAGTCTGCCAGGTCTTGCATGGGTATAAACAGATGCTGCGCAATGGAGCATGGGACCAGTGTATGTCTGCATTGGAGCCGCCAATAAAAGAAAAGCTTTCAAAATATCAAGTATAA
Protein sequence

>Msa0183250

MAAAVTPSWQPQEQGFKEICTLLEQQISHSSSSADKSQIWNQIQQYSNLPDFNNYLIFIFSRAQGISVEVRQAAGLYLKNNLRNVYNLMQPEYQQYVKSELLPCLGAADKHIRSTTGTIISVVVQTGGVSQWPELLQALVSCLDSSDLNHMEGAMDALSKICEDVPQILDTDVPGLAERPINIFLPRLFRFFQSPHASLRKLSLGSVNQYIMLMPSALYVSMDQYLQGLFILANDPTAEVRKLVCAAFVQLIEVRPSILEPHLRNVIEYMLQVNKDADEEVALESCEFWSAYCDAQMPPENLREFLPRLIPILLSNMAYADDDESLIEAEEEGSQPDRDQDLKPRFHVSRFHGSDDAEDDDDDDVVNTWNLRKCSAAALDILSNVFGDEILPTLMPIVEAKLSTVGDDGWKEREAAVLALGAIGEGCINGLYPHLPEIVAFLIPLLDDKFPLIRSISCWTVSRFSKFIIQGIGHPKGYEQFDNVLMGLLRRILDDNKRVQEAACSAFATLEEEAAEELAPRLEIILKHLMVAFGKYQRRNLRIVYDAVGTLAEAVGAELNQPVYLDILMPPLIEKWQQLSNSDKDLFPLLECFTSIAHALGPGFTQFAEPVFRRCINIIQTQTLAKANPAAAGAQYDKEFIVCSLDLLSGLTEGLGSGIESLVSQCSLRDLLLQCCTDDAHDVRQSAFALLGDLARVCVVHLHPRLSEILELASKQLEISKVHQAISVANNACWAIGELAVKVRQEISPFVLSVISCLVPILQHAEGLNKSLIENSAITLGRLAWVCPDLVSPHMEHFMQPWCNALSMIRDDVEKEDAFRGLCAMVKANPSGALSSLVYMCKAIASWHEIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV*