Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0427760 | XP_003602674.1 | 99.013 | 912 | 9 | 0 | 1 | 912 | 1 | 912 | 0.0 | 1875 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0427760 | sp|Q9FN05|PSL5_ARATH | 72.835 | 924 | 232 | 9 | 4 | 912 | 2 | 921 | 0.0 | 1427 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0427760 | G7JC76 | 99.013 | 912 | 9 | 0 | 1 | 912 | 1 | 912 | 0.0 | 1875 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0156240 | Msa0427760 | 0.813947 | 1.977764e-51 | -8.615850e-47 |
Msa0183250 | Msa0427760 | 0.818837 | 1.591167e-52 | -8.615850e-47 |
Msa0378410 | Msa0427760 | 0.835990 | 1.216376e-56 | -8.615850e-47 |
Msa0386470 | Msa0427760 | 0.815959 | 7.074788e-52 | -8.615850e-47 |
Msa0400420 | Msa0427760 | 0.802486 | 5.484628e-49 | -8.615850e-47 |
Msa0425310 | Msa0427760 | 0.801204 | 1.005209e-48 | -8.615850e-47 |
Msa0427760 | Msa0427950 | 0.988543 | 1.972410e-174 | -8.615850e-47 |
Msa0427760 | Msa0428210 | 0.833836 | 4.241830e-56 | -8.615850e-47 |
Msa0427760 | Msa0430230 | 0.826808 | 2.213460e-54 | -8.615850e-47 |
Msa0427760 | Msa0463530 | 0.822331 | 2.508389e-53 | -8.615850e-47 |
Msa0427760 | Msa0471940 | 0.815206 | 1.040940e-51 | -8.615850e-47 |
Msa0427760 | Msa0479850 | 0.820665 | 6.084463e-53 | -8.615850e-47 |
Msa0427760 | Msa0523650 | 0.807034 | 6.157032e-50 | -8.615850e-47 |
Msa0427760 | Msa0525880 | 0.826278 | 2.961448e-54 | -8.615850e-47 |
Msa0427760 | Msa0574900 | 0.804265 | 2.346771e-49 | -8.615850e-47 |
Msa0427760 | Msa0586450 | 0.819860 | 9.303872e-53 | -8.615850e-47 |
Msa0427760 | Msa0605530 | 0.829005 | 6.556949e-55 | -8.615850e-47 |
Msa0427760 | Msa0647070 | 0.800928 | 1.144918e-48 | -8.615850e-47 |
Msa0427760 | Msa0799450 | 0.855141 | 7.698747e-62 | -8.615850e-47 |
Msa0427760 | Msa0837710 | 0.846638 | 1.915305e-59 | -8.615850e-47 |
Msa0427760 | Msa1055200 | 0.807772 | 4.293941e-50 | -8.615850e-47 |
Msa0427760 | Msa1070890 | 0.817711 | 2.861584e-52 | -8.615850e-47 |
Msa0427760 | Msa1101120 | 0.845052 | 5.166208e-59 | -8.615850e-47 |
Msa0427760 | Msa1200260 | 0.830038 | 3.678411e-55 | -8.615850e-47 |
Msa0427760 | Msa1219830 | 0.823811 | 1.132989e-53 | -8.615850e-47 |
Msa0427760 | Msa1361360 | 0.822022 | 2.957756e-53 | -8.615850e-47 |
Msa0427760 | Msa1365820 | 0.812617 | 3.874741e-51 | -8.615850e-47 |
Msa0427760 | Msa1401510 | 0.823414 | 1.403061e-53 | -8.615850e-47 |
Msa0427760 | Msa1404680 | 0.852335 | 4.939004e-61 | -8.615850e-47 |
Msa0427760 | Msa1455400 | 0.844418 | 7.654073e-59 | -8.615850e-47 |
Msa0268110 | Msa0427760 | 0.840587 | 7.949815e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0427760 | MtrunA17_Chr3g0130691 | 99.013 | 912 | 9 | 0 | 1 | 912 | 1 | 912 | 0.0 | 1875 |
Msa0427760 | MtrunA17_Chr5g0409111 | 36.089 | 496 | 292 | 8 | 333 | 820 | 244 | 722 | 2.74e-94 | 320 |
Msa0427760 | MtrunA17_Chr2g0293101 | 31.971 | 685 | 388 | 21 | 217 | 859 | 200 | 848 | 1.05e-89 | 305 |
Msa0427760 | MtrunA17_Chr2g0293111 | 32.449 | 641 | 356 | 20 | 217 | 817 | 200 | 803 | 1.17e-87 | 300 |
Msa0427760 | MtrunA17_Chr1g0209901 | 27.954 | 787 | 439 | 22 | 173 | 877 | 144 | 884 | 5.19e-83 | 286 |
Msa0427760 | MtrunA17_Chr5g0423841 | 28.979 | 666 | 352 | 17 | 217 | 808 | 188 | 806 | 9.62e-82 | 283 |
Msa0427760 | MtrunA17_Chr1g0209911 | 27.985 | 779 | 430 | 23 | 173 | 864 | 141 | 875 | 1.44e-77 | 272 |
Msa0427760 | MtrunA17_Chr7g0256191 | 23.913 | 414 | 264 | 12 | 387 | 770 | 464 | 856 | 5.76e-19 | 92.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0427760 | AT5G63840.1 | 72.835 | 924 | 232 | 9 | 4 | 912 | 2 | 921 | 0.0 | 1427 |
Msa0427760 | AT5G63840.2 | 72.835 | 924 | 232 | 9 | 4 | 912 | 29 | 948 | 0.0 | 1426 |
Msa0427760 | AT3G23640.2 | 35.019 | 534 | 319 | 9 | 333 | 856 | 178 | 693 | 3.86e-102 | 341 |
Msa0427760 | AT3G23640.1 | 35.019 | 534 | 319 | 9 | 333 | 856 | 178 | 693 | 3.86e-102 | 341 |
Msa0427760 | AT3G23640.3 | 35.019 | 534 | 319 | 9 | 333 | 856 | 247 | 762 | 8.49e-102 | 342 |
Msa0427760 | AT3G45940.1 | 29.455 | 808 | 452 | 29 | 87 | 859 | 61 | 785 | 2.72e-85 | 292 |
Msa0427760 | AT5G11720.1 | 28.900 | 782 | 452 | 24 | 74 | 812 | 71 | 791 | 3.19e-84 | 290 |
Msa0427760 | AT1G68560.1 | 28.125 | 800 | 441 | 22 | 160 | 878 | 125 | 871 | 6.39e-81 | 281 |
Find 289 sgRNAs with CRISPR-Local
Find 487 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATGAATCGGGTTGGGATTT+GGG | 0.134779 | 3_2:-78428792 | None:intergenic |
ACCTTATAGATTATTCAATT+TGG | 0.164971 | 3_2:+78429319 | Msa0427760:CDS |
AATGAACCTTCTGTCTTTAA+TGG | 0.175554 | 3_2:+78430109 | Msa0427760:CDS |
AGCGGCTTGTTTAGTGATTT+AGG | 0.187733 | 3_2:+78433799 | Msa0427760:three_prime_UTR |
AACTGGTAGTGGAAAATATT+TGG | 0.205694 | 3_2:+78433684 | Msa0427760:exon |
TGATGAATCGGGTTGGGATT+TGG | 0.206266 | 3_2:-78428793 | None:intergenic |
GAATAAACCGTGTGAGTTAA+TGG | 0.206560 | 3_2:-78429093 | None:intergenic |
GATTCGCCGTTTGGACTTTA+TGG | 0.209699 | 3_2:+78429362 | Msa0427760:CDS |
GAGCTTACTATCCTTTCTTT+AGG | 0.210300 | 3_2:+78431613 | Msa0427760:CDS |
TGTAGCCTACGGACTTAATT+TGG | 0.212816 | 3_2:+78433866 | Msa0427760:three_prime_UTR |
CTGAATAATGTGTAGTAATA+TGG | 0.225988 | 3_2:-78432277 | None:intergenic |
TTCCTGTGGCCCGTCCATTA+TGG | 0.250007 | 3_2:+78432320 | Msa0427760:CDS |
CGGGTTGGGATTTGGGGATT+AGG | 0.258704 | 3_2:-78428785 | None:intergenic |
CATATTACTACACATTATTC+AGG | 0.265304 | 3_2:+78432278 | Msa0427760:CDS |
TTCTGCATCTCCTCAGGATT+AGG | 0.269078 | 3_2:-78429818 | None:intergenic |
TCAAATTAGTTAGTTAGTTC+TGG | 0.273411 | 3_2:+78433989 | Msa0427760:three_prime_UTR |
ATACTTTGAACCCTGAAATT+AGG | 0.277877 | 3_2:+78430011 | Msa0427760:CDS |
CCTAGAGATGCCTTACATTA+TGG | 0.279850 | 3_2:+78431146 | Msa0427760:CDS |
ATTGATGATGGCAGCAGTTT+TGG | 0.281278 | 3_2:+78433362 | Msa0427760:CDS |
AGCTTACTATCCTTTCTTTA+GGG | 0.283037 | 3_2:+78431614 | Msa0427760:CDS |
GCGGCTTGTTTAGTGATTTA+GGG | 0.286677 | 3_2:+78433800 | Msa0427760:three_prime_UTR |
GCCCACCATGACCTAATTTC+AGG | 0.288180 | 3_2:-78430022 | None:intergenic |
TCCAAATTGAATAATCTATA+AGG | 0.298183 | 3_2:-78429320 | None:intergenic |
GGGGACGTGGAAGCGTTTCT+TGG | 0.305717 | 3_2:-78428895 | None:intergenic |
TAGCAATGATGAAGCTTTCA+TGG | 0.309226 | 3_2:+78432372 | Msa0427760:CDS |
TGAGGAGATGCAGAAGAAAT+TGG | 0.309639 | 3_2:+78429826 | Msa0427760:CDS |
CGCAAGACTCGTAGCATGTT+CGG | 0.315746 | 3_2:-78429258 | None:intergenic |
GGTTCAGATTCTTCAACATT+AGG | 0.316196 | 3_2:-78429299 | None:intergenic |
GTCAAAGGTATGGTGCAATT+TGG | 0.316892 | 3_2:+78431300 | Msa0427760:CDS |
AGACGAGAACCATGGTTGTT+TGG | 0.320713 | 3_2:+78431660 | Msa0427760:CDS |
GTAGACCTGGCACCTACTTC+TGG | 0.321946 | 3_2:+78433446 | Msa0427760:CDS |
TATATTCACGATTCGCCGTT+TGG | 0.322641 | 3_2:+78429353 | Msa0427760:CDS |
ATTCGGACAGTTGAAGAAAC+TGG | 0.329187 | 3_2:-78428528 | None:intergenic |
TCTGCATCTCCTCAGGATTA+GGG | 0.330890 | 3_2:-78429817 | None:intergenic |
CAACTCCTTCACTTTACATA+TGG | 0.333448 | 3_2:+78430077 | Msa0427760:CDS |
ACGGAATTCATCTTTCTTCC+AGG | 0.334407 | 3_2:-78428655 | None:intergenic |
CAAATTGATGTTCTTGCCTC+TGG | 0.334832 | 3_2:+78429461 | Msa0427760:CDS |
GACGAGAACCATGGTTGTTT+GGG | 0.347906 | 3_2:+78431661 | Msa0427760:CDS |
TGTACACAGTTCCAGTTCTT+AGG | 0.349932 | 3_2:-78432589 | None:intergenic |
ATCGAGCGCGTTTGCAGAAT+GGG | 0.352415 | 3_2:-78428692 | None:intergenic |
TGCACCATACCTTTGACTTC+CGG | 0.354799 | 3_2:-78431294 | None:intergenic |
TCTGGTTGGGATGCTGAGTC+GGG | 0.361126 | 3_2:+78429479 | Msa0427760:CDS |
AATAAAACGTCTATGGATAA+AGG | 0.361986 | 3_2:-78433399 | None:intergenic |
CGCGTTTGCAGAATGGGGTT+TGG | 0.362668 | 3_2:-78428686 | None:intergenic |
TACTGTCTCAAAACATCTTT+CGG | 0.368792 | 3_2:-78429593 | None:intergenic |
AACGGAGAGAGTGAGGAGTA+AGG | 0.369755 | 3_2:-78428820 | None:intergenic |
TATAGAACTTGGACCGCTTT+GGG | 0.372987 | 3_2:+78433577 | Msa0427760:CDS |
CAATTCACCTTCAGCTGCTT+GGG | 0.373119 | 3_2:-78433336 | None:intergenic |
CTCTGGTTGGGATGCTGAGT+CGG | 0.373274 | 3_2:+78429478 | Msa0427760:CDS |
GCAAGACTCGTAGCATGTTC+GGG | 0.375254 | 3_2:-78429257 | None:intergenic |
TGATGTTCTTGCCTCTGGTT+GGG | 0.376419 | 3_2:+78429466 | Msa0427760:CDS |
TTTGATGGTTGGTGCTGGCC+TGG | 0.381957 | 3_2:+78429971 | Msa0427760:CDS |
GACTGGAACTTCGCCGAAAC+CGG | 0.383800 | 3_2:-78432697 | None:intergenic |
CCTTAGAGTTTCAGTTCCTA+TGG | 0.386371 | 3_2:+78431352 | Msa0427760:CDS |
CGCTTCCTACTTCACAGAAT+AGG | 0.387393 | 3_2:+78429507 | Msa0427760:CDS |
CCATAGGAACTGAAACTCTA+AGG | 0.387748 | 3_2:-78431352 | None:intergenic |
CGCGCTCGATCTCGCTCCCC+TGG | 0.388774 | 3_2:+78428705 | Msa0427760:CDS |
ATATAGAACTTGGACCGCTT+TGG | 0.389077 | 3_2:+78433576 | Msa0427760:CDS |
AAGGATAGTAAGCTCCTAAC+TGG | 0.391124 | 3_2:-78431605 | None:intergenic |
TTCTTCAACATTAGGTCCTC+TGG | 0.392148 | 3_2:-78429291 | None:intergenic |
AATTGCGAAACGACGACGTC+GGG | 0.395712 | 3_2:-78428915 | None:intergenic |
GAAGTTCAACTGCAAAAGTT+AGG | 0.397348 | 3_2:+78433727 | Msa0427760:three_prime_UTR |
AATGTCATAGCAAATGAATC+TGG | 0.397919 | 3_2:-78428566 | None:intergenic |
CGGGAGTTGCATAATGCCTA+TGG | 0.401865 | 3_2:+78431182 | Msa0427760:CDS |
CAAAAGGTTGATATAGAACT+TGG | 0.414307 | 3_2:+78433566 | Msa0427760:CDS |
TAACGAGGAAGGACCGGTTT+CGG | 0.415029 | 3_2:+78432684 | Msa0427760:CDS |
GCCTGGTTCTTCGTCCTATC+CGG | 0.415792 | 3_2:+78429988 | Msa0427760:CDS |
GATGGGAATTCCATCCATAA+TGG | 0.417412 | 3_2:-78432334 | None:intergenic |
TGCTGCTGTGACGGGAGGTT+CGG | 0.417549 | 3_2:+78429616 | Msa0427760:CDS |
CCGGTCCTTCCTCGTTAGAA+TGG | 0.422717 | 3_2:-78432678 | None:intergenic |
TTAGAATGGTTCCAGCTCTC+TGG | 0.423790 | 3_2:-78432664 | None:intergenic |
AATTTCTTCTGCATCTCCTC+AGG | 0.424390 | 3_2:-78429824 | None:intergenic |
GCAGAAGAAATTGGATGGTA+AGG | 0.427842 | 3_2:+78429835 | Msa0427760:CDS |
ATGGGGTTTGGTTACAGTTA+CGG | 0.428860 | 3_2:-78428674 | None:intergenic |
TCTGCACCACCGTCTTCTCC+TGG | 0.429847 | 3_2:+78428637 | Msa0427760:CDS |
TTGTCAAGAGCATTGTTTGC+CGG | 0.430107 | 3_2:+78431275 | Msa0427760:CDS |
ATTTCAGGGTTCAAAGTATC+CGG | 0.434571 | 3_2:-78430007 | None:intergenic |
TGGCGATAACTCTGCCGATT+GGG | 0.437132 | 3_2:+78431325 | Msa0427760:CDS |
GAATCCGGATCCTGAGTTAT+TGG | 0.438991 | 3_2:+78431572 | Msa0427760:CDS |
CATAAGGAGGCGTCAGAGAA+AGG | 0.439593 | 3_2:+78429917 | Msa0427760:CDS |
TTGGTCCGCTGGTACCAGTT+AGG | 0.441983 | 3_2:+78431591 | Msa0427760:CDS |
ATCTTCTGCAACACGGACAT+TGG | 0.445693 | 3_2:-78433642 | None:intergenic |
GGAGTGTGAAACGCAGCGTT+TGG | 0.445742 | 3_2:-78428605 | None:intergenic |
ACAATTCACCTTCAGCTGCT+TGG | 0.446099 | 3_2:-78433337 | None:intergenic |
TTCTCATCTCTCTTAATATG+AGG | 0.450608 | 3_2:-78429884 | None:intergenic |
TCTTCTGCAACACGGACATT+GGG | 0.451085 | 3_2:-78433641 | None:intergenic |
GCGATGAGGTCAGAGGAACC+AGG | 0.455429 | 3_2:-78428723 | None:intergenic |
CAGATAGACTGATGCATGCT+TGG | 0.457658 | 3_2:-78432543 | None:intergenic |
GGATTTGGGGATTAGGTTAG+CGG | 0.459204 | 3_2:-78428778 | None:intergenic |
ATTAAGTCCGTAGGCTACAT+TGG | 0.463411 | 3_2:-78433862 | None:intergenic |
TCAAGCCACAAAACATCATA+AGG | 0.466368 | 3_2:-78429743 | None:intergenic |
TCGTGGTATGACCTAAGAAC+TGG | 0.466818 | 3_2:+78432578 | Msa0427760:CDS |
TTGATGTTCTTGCCTCTGGT+TGG | 0.466971 | 3_2:+78429465 | Msa0427760:CDS |
ACGGAGAGAGTGAGGAGTAA+GGG | 0.468845 | 3_2:-78428819 | None:intergenic |
AATGCTCTTGACAAAACAAA+TGG | 0.469678 | 3_2:-78431266 | None:intergenic |
TGAATAATGTGTAGTAATAT+GGG | 0.470573 | 3_2:-78432276 | None:intergenic |
CTAAAAGTAGTTTCATCAGA+TGG | 0.473918 | 3_2:-78432352 | None:intergenic |
GATCGAGCGCGTTTGCAGAA+TGG | 0.475419 | 3_2:-78428693 | None:intergenic |
GGAAATGAAGGTGTAAGATT+CGG | 0.475848 | 3_2:-78428545 | None:intergenic |
ATGAATCGGGTTGGGATTTG+GGG | 0.477583 | 3_2:-78428791 | None:intergenic |
TTATGGAGGTGTGGAACATC+GGG | 0.480881 | 3_2:+78431163 | Msa0427760:CDS |
GTATTTCAATTTGTTAATGT+AGG | 0.481754 | 3_2:+78428459 | Msa0427760:five_prime_UTR |
AGGGGTGACACACAAGTTAG+AGG | 0.486618 | 3_2:+78432616 | Msa0427760:CDS |
TTGGACCGCTTTGGGTTCAA+AGG | 0.486769 | 3_2:+78433585 | Msa0427760:CDS |
TTCAGGGAGGCTAACACTAC+TGG | 0.488005 | 3_2:+78432295 | Msa0427760:CDS |
GATGCGTGGAAGCCAGAGTT+TGG | 0.489159 | 3_2:-78428946 | None:intergenic |
TTCCACATGGCAACATCTGA+AGG | 0.489273 | 3_2:+78431212 | Msa0427760:CDS |
CATCCAATGTTGTTATTGAG+AGG | 0.489862 | 3_2:+78433486 | Msa0427760:CDS |
CAACTGCAAAAGTTAGGATA+AGG | 0.490396 | 3_2:+78433733 | Msa0427760:three_prime_UTR |
GCAAATGAATCTGGAAATGA+AGG | 0.495647 | 3_2:-78428557 | None:intergenic |
AACTCTAAGGTGATCCCAAT+CGG | 0.496052 | 3_2:-78431339 | None:intergenic |
CCCACCATGACCTAATTTCA+GGG | 0.496996 | 3_2:-78430021 | None:intergenic |
AAGAACTGGAACTGTGTACA+AGG | 0.497857 | 3_2:+78432592 | Msa0427760:CDS |
TTCCACACCTCCATAATGTA+AGG | 0.497951 | 3_2:-78431156 | None:intergenic |
ATGATGAAGCTTTCATGGTC+GGG | 0.502509 | 3_2:+78432377 | Msa0427760:CDS |
CTGGCGATAACTCTGCCGAT+TGG | 0.505985 | 3_2:+78431324 | Msa0427760:CDS |
CCATTCTAACGAGGAAGGAC+CGG | 0.510010 | 3_2:+78432678 | Msa0427760:CDS |
GGGCTATTGAAGCGTGGTGA+AGG | 0.510307 | 3_2:+78431233 | Msa0427760:CDS |
ATCCATAATGGACGGGCCAC+AGG | 0.511367 | 3_2:-78432322 | None:intergenic |
TTGATAAACACTGTGTTTAG+CGG | 0.511372 | 3_2:+78434044 | Msa0427760:three_prime_UTR |
CGGACCAATAACTCAGGATC+CGG | 0.511805 | 3_2:-78431576 | None:intergenic |
AAACGACGACGTCGGGGACG+TGG | 0.511862 | 3_2:-78428908 | None:intergenic |
GCGACGATAACTCCGGCGAC+CGG | 0.512572 | 3_2:+78429063 | Msa0427760:CDS |
CTTACCGGGATGTCATTCTC+TGG | 0.513239 | 3_2:+78431389 | Msa0427760:CDS |
ATGTCCGTGTTGCAGAAGAT+TGG | 0.514436 | 3_2:+78433645 | Msa0427760:CDS |
GTTCCAGCTCTCTGGAAAGC+AGG | 0.516788 | 3_2:-78432656 | None:intergenic |
GATTGAGCCCTCAAATCAAA+AGG | 0.520485 | 3_2:+78433550 | Msa0427760:CDS |
ATTCCTGCTTTCCAGAGAGC+TGG | 0.520525 | 3_2:+78432653 | Msa0427760:CDS |
CATGCATCAGTCTATCTGCC+TGG | 0.521383 | 3_2:+78432548 | Msa0427760:CDS |
TAAAAGTAGTTTCATCAGAT+GGG | 0.521520 | 3_2:-78432351 | None:intergenic |
AATGGAAATTACCCGGTCGC+CGG | 0.522729 | 3_2:-78429075 | None:intergenic |
AGAAAAGAAGTCTTGAAGAA+TGG | 0.523378 | 3_2:+78433756 | Msa0427760:three_prime_UTR |
CGGTGGTGCAGAGAAGAAGA+AGG | 0.524576 | 3_2:-78428626 | None:intergenic |
TGGACCGCTTTGGGTTCAAA+GGG | 0.525605 | 3_2:+78433586 | Msa0427760:CDS |
ACGGACATTGGGTTTACGTA+TGG | 0.526218 | 3_2:-78433630 | None:intergenic |
TCAATCCTATTCTGTGAAGT+AGG | 0.526238 | 3_2:-78429512 | None:intergenic |
TCCGGATAGGACGAAGAACC+AGG | 0.528174 | 3_2:-78429989 | None:intergenic |
ATGCAGGTGCTGATGTTGGT+GGG | 0.530016 | 3_2:+78431541 | Msa0427760:intron |
ATCCTGAGTTATTGGTCCGC+TGG | 0.532185 | 3_2:+78431580 | Msa0427760:CDS |
ATCTTTCTTCCAGGAGAAGA+CGG | 0.532274 | 3_2:-78428646 | None:intergenic |
TCTGGAATGGTCATCTGTGT+TGG | 0.532740 | 3_2:+78433907 | Msa0427760:three_prime_UTR |
TATGCAGGTGCTGATGTTGG+TGG | 0.533517 | 3_2:+78431540 | Msa0427760:intron |
AATCCTCTCAATAACAACAT+TGG | 0.535889 | 3_2:-78433489 | None:intergenic |
CTTTATGCAGGTGCTGATGT+TGG | 0.536882 | 3_2:+78431537 | Msa0427760:intron |
ATTATGGAGGTGTGGAACAT+CGG | 0.537541 | 3_2:+78431162 | Msa0427760:CDS |
GAATTTGAGAGATGTATGCT+TGG | 0.538948 | 3_2:+78433828 | Msa0427760:three_prime_UTR |
TAATTAGCGTCCTTGTGTCT+AGG | 0.540590 | 3_2:+78434100 | Msa0427760:three_prime_UTR |
CGCCGTCGGAGATGGTGACG+TGG | 0.543538 | 3_2:-78428749 | None:intergenic |
TTACGTATGGTCATGAAAGC+TGG | 0.543961 | 3_2:-78433617 | None:intergenic |
GAGGATTCCGTCTTGATGAA+CGG | 0.544937 | 3_2:-78428838 | None:intergenic |
TCGCGGATGAAAAGCTCAAA+CGG | 0.545435 | 3_2:-78429044 | None:intergenic |
TTACCGTGAGAAAGCATGAA+TGG | 0.545594 | 3_2:-78429392 | None:intergenic |
AGACAGTATGCTGCTGTGAC+GGG | 0.546605 | 3_2:+78429608 | Msa0427760:CDS |
TTCCACCAGAAGTAGGTGCC+AGG | 0.547193 | 3_2:-78433451 | None:intergenic |
CGACGATAACTCCGGCGACC+GGG | 0.547881 | 3_2:+78429064 | Msa0427760:CDS |
TGCTTTCTCACGGTAAAGCG+AGG | 0.548776 | 3_2:+78429399 | Msa0427760:CDS |
GGTGAGATCGCCGTCGGAGA+TGG | 0.548882 | 3_2:-78428757 | None:intergenic |
GGGATCATTTGTCATCTGAC+TGG | 0.549218 | 3_2:-78432714 | None:intergenic |
CATTGTTTGCCGGAAGTCAA+AGG | 0.551007 | 3_2:+78431285 | Msa0427760:CDS |
ATCGAACCATAAAGTCCAAA+CGG | 0.554045 | 3_2:-78429368 | None:intergenic |
TTGAACATACTGACGGGAAG+AGG | 0.554859 | 3_2:+78429768 | Msa0427760:CDS |
CAGAAGAAATTGGATGGTAA+GGG | 0.556625 | 3_2:+78429836 | Msa0427760:CDS |
CAGTGGCTTATCATCAGTGT+CGG | 0.556818 | 3_2:+78429657 | Msa0427760:CDS |
ACATCGAAGCTAATCGATTG+AGG | 0.557812 | 3_2:-78429200 | None:intergenic |
TGGGCATGGGCCCTAAAGAA+AGG | 0.558231 | 3_2:-78431624 | None:intergenic |
ATAAGGAGGCGTCAGAGAAA+GGG | 0.558293 | 3_2:+78429918 | Msa0427760:CDS |
GACGTGGAAGCGTTTCTTGG+AGG | 0.558478 | 3_2:-78428892 | None:intergenic |
CCATAATGTAAGGCATCTCT+AGG | 0.560102 | 3_2:-78431146 | None:intergenic |
TGTGGCCCGTCCATTATGGA+TGG | 0.560447 | 3_2:+78432324 | Msa0427760:CDS |
AGGTATGGTGCAATTTGGAC+TGG | 0.562978 | 3_2:+78431305 | Msa0427760:CDS |
ATATTACTACACATTATTCA+GGG | 0.564087 | 3_2:+78432279 | Msa0427760:CDS |
CGTTACCAAATTAAGTCCGT+AGG | 0.564634 | 3_2:-78433871 | None:intergenic |
AGCGTGGTGAAGGGAAAGAC+AGG | 0.566529 | 3_2:+78431243 | Msa0427760:CDS |
ACCATCAAAATCATTCCCAC+TGG | 0.568217 | 3_2:-78429957 | None:intergenic |
CTCAAAACATCTTTCGGCCG+CGG | 0.570734 | 3_2:-78429587 | None:intergenic |
AATGATGAAGCTTTCATGGT+CGG | 0.573210 | 3_2:+78432376 | Msa0427760:CDS |
GGCTATTGAAGCGTGGTGAA+GGG | 0.573501 | 3_2:+78431234 | Msa0427760:CDS |
TCTTCTGTTTACCTCTCCGA+CGG | 0.573516 | 3_2:+78428996 | Msa0427760:CDS |
CTGGAACTGTGTACAAGGGA+GGG | 0.575434 | 3_2:+78432597 | Msa0427760:CDS |
GAATTCCATCCATAATGGAC+GGG | 0.576160 | 3_2:-78432329 | None:intergenic |
ATTGAGAGGATTATCGTGCT+AGG | 0.577116 | 3_2:+78433500 | Msa0427760:CDS |
TGGAAGCCAGAGTTTGGTGT+TGG | 0.577370 | 3_2:-78428940 | None:intergenic |
CGAACATTTCCACCAGAAGT+AGG | 0.577840 | 3_2:-78433458 | None:intergenic |
TCAACATTAGGTCCTCTGGT+AGG | 0.577930 | 3_2:-78429287 | None:intergenic |
GAGAGGTAAACAGAAGAAGA+AGG | 0.578720 | 3_2:-78428990 | None:intergenic |
ATTCCATTCATGCTTTCTCA+CGG | 0.579812 | 3_2:+78429389 | Msa0427760:CDS |
GACCTGGCACCTACTTCTGG+TGG | 0.580907 | 3_2:+78433449 | Msa0427760:CDS |
AGACCAAGGGTCAAAACCAT+AGG | 0.581886 | 3_2:-78431368 | None:intergenic |
GAGACAGTATGCTGCTGTGA+CGG | 0.582246 | 3_2:+78429607 | Msa0427760:CDS |
AATTCGCCAACACCAAACTC+TGG | 0.582448 | 3_2:+78428934 | Msa0427760:CDS |
TTCATCCGCGACGATAACTC+CGG | 0.582976 | 3_2:+78429056 | Msa0427760:CDS |
ATCAAATATCGTGAAATACT+CGG | 0.583839 | 3_2:-78434026 | None:intergenic |
CTGAAAACCTACCAGAGTGA+AGG | 0.587681 | 3_2:-78432735 | None:intergenic |
TGAAAACCTACCAGAGTGAA+GGG | 0.588985 | 3_2:-78432734 | None:intergenic |
TTCTGTCTTTAATGGTCCCG+AGG | 0.592528 | 3_2:+78430117 | Msa0427760:CDS |
TTTGCCGGAAGTCAAAGGTA+TGG | 0.592991 | 3_2:+78431290 | Msa0427760:CDS |
CTAATCGATTGAGGACCGTA+TGG | 0.593256 | 3_2:-78429191 | None:intergenic |
GGTGAATTGTACATTGATGA+TGG | 0.593720 | 3_2:+78433350 | Msa0427760:CDS |
GGAATTCCATCCATAATGGA+CGG | 0.594012 | 3_2:-78432330 | None:intergenic |
TCCACATGGCAACATCTGAA+GGG | 0.595054 | 3_2:+78431213 | Msa0427760:CDS |
GACAAATGATCCCTTCACTC+TGG | 0.595286 | 3_2:+78432724 | Msa0427760:CDS |
AGAGAAAGGGTATTACACTA+AGG | 0.595632 | 3_2:+78429931 | Msa0427760:CDS |
AGGGAAAAGAACTCTATCCC+AGG | 0.596886 | 3_2:-78429798 | None:intergenic |
GGATGGTAAGGGAAGGCGCA+TGG | 0.598327 | 3_2:+78429847 | Msa0427760:CDS |
GTCGGAGATGGTGACGTGGG+TGG | 0.599244 | 3_2:-78428745 | None:intergenic |
AGGGTTCAAAGTATCCGGAT+AGG | 0.599330 | 3_2:-78430002 | None:intergenic |
CCCTGAAATTAGGTCATGGT+GGG | 0.601724 | 3_2:+78430021 | Msa0427760:CDS |
TAACACTACTGGCGTTCCTG+TGG | 0.602036 | 3_2:+78432306 | Msa0427760:CDS |
TGCCTTACATTATGGAGGTG+TGG | 0.604146 | 3_2:+78431154 | Msa0427760:CDS |
GCTTTCTCACGGTAAAGCGA+GGG | 0.604214 | 3_2:+78429400 | Msa0427760:CDS |
GAAACTTACTTCTGTAGACC+TGG | 0.604421 | 3_2:+78433433 | Msa0427760:CDS |
CTTGATGAACGGAGAGAGTG+AGG | 0.605322 | 3_2:-78428827 | None:intergenic |
CTGGTTGGGATGCTGAGTCG+GGG | 0.606679 | 3_2:+78429480 | Msa0427760:CDS |
AATAGTTCCCAAGCAGCTGA+AGG | 0.608021 | 3_2:+78433329 | Msa0427760:CDS |
ATTGCCTCAGATGTTTGCAG+TGG | 0.609867 | 3_2:+78429640 | Msa0427760:CDS |
GAGATGCAGAAGAAATTGGA+TGG | 0.611153 | 3_2:+78429830 | Msa0427760:CDS |
ACTCTCTCCGTTCATCAAGA+CGG | 0.611386 | 3_2:+78428831 | Msa0427760:CDS |
TTGATATTGAACATACTGAC+GGG | 0.614044 | 3_2:+78429762 | Msa0427760:CDS |
TGGCTTATCATCAGTGTCGG+TGG | 0.615270 | 3_2:+78429660 | Msa0427760:CDS |
TGAACCCTGAAATTAGGTCA+TGG | 0.615595 | 3_2:+78430017 | Msa0427760:CDS |
GGGAGTTGCATAATGCCTAT+GGG | 0.616936 | 3_2:+78431183 | Msa0427760:CDS |
ATCGTGCTAGGTCATGCTCA+TGG | 0.617000 | 3_2:+78433512 | Msa0427760:CDS |
ATGACATCCCGGTAAGACCA+AGG | 0.617088 | 3_2:-78431382 | None:intergenic |
GTTGAAGAAACTGGGTAGTG+TGG | 0.618329 | 3_2:-78428519 | None:intergenic |
CAATCCTACCCAAACAACCA+TGG | 0.619331 | 3_2:-78431669 | None:intergenic |
TTCGGACAGTTGAAGAAACT+GGG | 0.619703 | 3_2:-78428527 | None:intergenic |
ACGATGTGGATGAGTGAAGC+TGG | 0.621631 | 3_2:+78429536 | Msa0427760:CDS |
TCATTCCATATGTAAAGTGA+AGG | 0.622943 | 3_2:-78430082 | None:intergenic |
TGGAACTGTGTACAAGGGAG+GGG | 0.623142 | 3_2:+78432598 | Msa0427760:CDS |
TGTGAATCCAATGTAGCCTA+CGG | 0.624723 | 3_2:+78433855 | Msa0427760:three_prime_UTR |
TCGAGCGCGTTTGCAGAATG+GGG | 0.625028 | 3_2:-78428691 | None:intergenic |
TGGAACCATTCTAACGAGGA+AGG | 0.628066 | 3_2:+78432673 | Msa0427760:CDS |
CTGACCAGAGAATGACATCC+CGG | 0.629437 | 3_2:-78431393 | None:intergenic |
CGATGAGGTCAGAGGAACCA+GGG | 0.629720 | 3_2:-78428722 | None:intergenic |
AGAATAGGATTGATACGATG+TGG | 0.630262 | 3_2:+78429522 | Msa0427760:CDS |
CTTGATATTGAACATACTGA+CGG | 0.633927 | 3_2:+78429761 | Msa0427760:CDS |
CATGTGGAAGTAATACCCAT+AGG | 0.636522 | 3_2:-78431198 | None:intergenic |
ACACAAGTTAGAGGTTACAG+AGG | 0.640736 | 3_2:+78432625 | Msa0427760:CDS |
CGACTCAGCATCCCAACCAG+AGG | 0.644514 | 3_2:-78429477 | None:intergenic |
TCGGGACCATTAAAGACAGA+AGG | 0.645847 | 3_2:-78430115 | None:intergenic |
CAGTATGCTGCTGTGACGGG+AGG | 0.646123 | 3_2:+78429611 | Msa0427760:CDS |
TGACATCCCGGTAAGACCAA+GGG | 0.646199 | 3_2:-78431381 | None:intergenic |
CTATGGGTATTACTTCCACA+TGG | 0.648812 | 3_2:+78431199 | Msa0427760:CDS |
CATACTGACAAAAGACCATA+CGG | 0.649468 | 3_2:+78429176 | Msa0427760:CDS |
CTTTCTCACGGTAAAGCGAG+GGG | 0.650585 | 3_2:+78429401 | Msa0427760:CDS |
TCGGTGGAATTATCGTGATG+AGG | 0.651398 | 3_2:+78429676 | Msa0427760:CDS |
GTGCACAAATACAATTTCAG+CGG | 0.652338 | 3_2:+78433781 | Msa0427760:three_prime_UTR |
ACCCACGTCACCATCTCCGA+CGG | 0.652401 | 3_2:+78428747 | Msa0427760:CDS |
TTTGCCCTTTGAACCCAAAG+CGG | 0.652469 | 3_2:-78433590 | None:intergenic |
TGGTGACGTGGGTGGCGATG+AGG | 0.653016 | 3_2:-78428737 | None:intergenic |
GTGGAATTATCGTGATGAGG+AGG | 0.653073 | 3_2:+78429679 | Msa0427760:CDS |
ACTGGAACTGTGTACAAGGG+AGG | 0.653156 | 3_2:+78432596 | Msa0427760:CDS |
CAGCGGAGTAACCGTCGGAG+AGG | 0.653810 | 3_2:-78429007 | None:intergenic |
ATCTGCCTGGAAAACAATCG+TGG | 0.653902 | 3_2:+78432561 | Msa0427760:CDS |
GTGGGTGGCGATGAGGTCAG+AGG | 0.654540 | 3_2:-78428730 | None:intergenic |
TATTACACTAAGGATTCCAG+TGG | 0.658554 | 3_2:+78429941 | Msa0427760:CDS |
GTAATTTCCATTAACTCACA+CGG | 0.658766 | 3_2:+78429086 | Msa0427760:CDS |
GAATTGCGAAACGACGACGT+CGG | 0.659072 | 3_2:-78428916 | None:intergenic |
GCCGTCGGAGATGGTGACGT+GGG | 0.660744 | 3_2:-78428748 | None:intergenic |
AAGGCGCATGGTTACCATCG+TGG | 0.662768 | 3_2:+78429859 | Msa0427760:CDS |
GTGAGTTAATGGAAATTACC+CGG | 0.663130 | 3_2:-78429082 | None:intergenic |
AGAAATTGGATGGTAAGGGA+AGG | 0.663197 | 3_2:+78429840 | Msa0427760:CDS |
TAAGCCACTGCAAACATCTG+AGG | 0.665748 | 3_2:-78429644 | None:intergenic |
ACCCTGAAATTAGGTCATGG+TGG | 0.666262 | 3_2:+78430020 | Msa0427760:CDS |
TAGTCCAATCTTCTGCAACA+CGG | 0.666462 | 3_2:-78433649 | None:intergenic |
TACCAGCGGACCAATAACTC+AGG | 0.667995 | 3_2:-78431582 | None:intergenic |
AGAGATGCCTTACATTATGG+AGG | 0.668919 | 3_2:+78431149 | Msa0427760:CDS |
GCCCTTCAGATGTTGCCATG+TGG | 0.669777 | 3_2:-78431214 | None:intergenic |
ATTGCGAAACGACGACGTCG+GGG | 0.669976 | 3_2:-78428914 | None:intergenic |
AAAGCTCAAACGGATCGTGA+CGG | 0.671159 | 3_2:-78429034 | None:intergenic |
TTTCGTCGATGATGAGACGG+AGG | 0.671891 | 3_2:-78428857 | None:intergenic |
AGATCTTCTGAATTGATGCG+TGG | 0.687594 | 3_2:-78428960 | None:intergenic |
GATGAGGTCAGAGGAACCAG+GGG | 0.688817 | 3_2:-78428721 | None:intergenic |
GTTAGCGGTGAGATCGCCGT+CGG | 0.689961 | 3_2:-78428763 | None:intergenic |
AGTGCAAGGGATCTATACTG+AGG | 0.691054 | 3_2:+78432411 | Msa0427760:CDS |
CTTAATATGAGGATCCACGA+TGG | 0.692754 | 3_2:-78429873 | None:intergenic |
TCTGAAGGGCTATTGAAGCG+TGG | 0.698532 | 3_2:+78431227 | Msa0427760:CDS |
AAGCTCCTAACTGGTACCAG+CGG | 0.704334 | 3_2:-78431596 | None:intergenic |
ATTACACTAAGGATTCCAGT+GGG | 0.708397 | 3_2:+78429942 | Msa0427760:CDS |
AGAACTGGAACTGTGTACAA+GGG | 0.709398 | 3_2:+78432593 | Msa0427760:CDS |
GATTACAGCGGAGTAACCGT+CGG | 0.709407 | 3_2:-78429012 | None:intergenic |
AATGAATATACCTAGACACA+AGG | 0.710297 | 3_2:-78434110 | None:intergenic |
TTTCTCACGGTAAAGCGAGG+GGG | 0.714940 | 3_2:+78429402 | Msa0427760:CDS |
TTTCTTCCAGGAGAAGACGG+TGG | 0.717944 | 3_2:-78428643 | None:intergenic |
GAGCTGGAACCATTCTAACG+AGG | 0.725405 | 3_2:+78432669 | Msa0427760:CDS |
TTACTACACATTATTCAGGG+AGG | 0.740218 | 3_2:+78432282 | Msa0427760:CDS |
CTTGCGTTGAAACCTACCAG+AGG | 0.748604 | 3_2:+78429275 | Msa0427760:CDS |
GGTCGCCGGAGTTATCGTCG+CGG | 0.751818 | 3_2:-78429061 | None:intergenic |
CGGATCGTGACGGATTACAG+CGG | 0.752571 | 3_2:-78429024 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTTTCATATAATTTAAATT+TGG | + | chr3_2:78431015-78431034 | Msa0427760:intron | 10.0% |
!!! | AATGTAAGTCTTTATAATTT+TGG | - | chr3_2:78430350-78430369 | None:intergenic | 15.0% |
!!! | TACTTTTAAGCTTTTTTTTT+TGG | + | chr3_2:78431695-78431714 | Msa0427760:intron | 15.0% |
!!! | TATCATCAGTTTTTTTTTTT+TGG | + | chr3_2:78431731-78431750 | Msa0427760:intron | 15.0% |
!! | TTGAATAAGTATAAAATGAA+GGG | - | chr3_2:78431761-78431780 | None:intergenic | 15.0% |
!!! | ACTTTTGACTAATTTTTAAA+GGG | - | chr3_2:78431844-78431863 | None:intergenic | 15.0% |
!!! | TACCATTTCAAAAATCATTT+TGG | + | chr3_2:78428370-78428389 | Msa0427760:five_prime_UTR | 20.0% |
!!! | AACCAAAATGATTTTTGAAA+TGG | - | chr3_2:78428375-78428394 | None:intergenic | 20.0% |
!!! | GTATTTCAATTTGTTAATGT+AGG | + | chr3_2:78428459-78428478 | Msa0427760:five_prime_UTR | 20.0% |
!! | ACCTTATAGATTATTCAATT+TGG | + | chr3_2:78429319-78429338 | Msa0427760:CDS | 20.0% |
!! | TCCAAATTGAATAATCTATA+AGG | - | chr3_2:78429323-78429342 | None:intergenic | 20.0% |
!!! | ATTTTCTTATCAAAGTTATG+TGG | + | chr3_2:78430051-78430070 | Msa0427760:CDS | 20.0% |
!!! | TTTTCTTATCAAAGTTATGT+GGG | + | chr3_2:78430052-78430071 | Msa0427760:CDS | 20.0% |
!! | TTGAAATAATAAACATACCT+CGG | - | chr3_2:78430137-78430156 | None:intergenic | 20.0% |
!!! | TATATTCATGCATTTTGATT+TGG | + | chr3_2:78430208-78430227 | Msa0427760:intron | 20.0% |
!!! | ATATTCATGCATTTTGATTT+GGG | + | chr3_2:78430209-78430228 | Msa0427760:intron | 20.0% |
!!! | TAATGTGATAGTAATTTGTA+AGG | + | chr3_2:78430246-78430265 | Msa0427760:intron | 20.0% |
!! | TTACATTTCTTGTATATGAT+AGG | + | chr3_2:78430363-78430382 | Msa0427760:intron | 20.0% |
!! | TACATTTCTTGTATATGATA+GGG | + | chr3_2:78430364-78430383 | Msa0427760:intron | 20.0% |
!! | ACTGATCTATTAATCAATAT+TGG | - | chr3_2:78430855-78430874 | None:intergenic | 20.0% |
!! | AAAAAAAGATCATCATAAGA+AGG | - | chr3_2:78431425-78431444 | None:intergenic | 20.0% |
!! | GTTGAATAAGTATAAAATGA+AGG | - | chr3_2:78431762-78431781 | None:intergenic | 20.0% |
!!! | CACTTTTGACTAATTTTTAA+AGG | - | chr3_2:78431845-78431864 | None:intergenic | 20.0% |
!! | TATATATAAGATTTGTACAG+TGG | - | chr3_2:78431899-78431918 | None:intergenic | 20.0% |
!! | TGAATAATGTGTAGTAATAT+GGG | - | chr3_2:78432279-78432298 | None:intergenic | 20.0% |
!! | ATATTACTACACATTATTCA+GGG | + | chr3_2:78432279-78432298 | Msa0427760:CDS | 20.0% |
!! | TTAAGAATCACAAAAAAGAA+GGG | - | chr3_2:78432487-78432506 | None:intergenic | 20.0% |
!! | ATTAAGAATCACAAAAAAGA+AGG | - | chr3_2:78432488-78432507 | None:intergenic | 20.0% |
!!! | TTTTTATAATTCGTCAATTC+TGG | + | chr3_2:78432513-78432532 | Msa0427760:intron | 20.0% |
!!! | TGTCAAAAAGCATATTATAT+AGG | - | chr3_2:78433015-78433034 | None:intergenic | 20.0% |
!!! | TAACGATAATTTTTATCATC+TGG | + | chr3_2:78433889-78433908 | Msa0427760:three_prime_UTR | 20.0% |
!!! | ATAATTTTTATCATCTGGAA+TGG | + | chr3_2:78433894-78433913 | Msa0427760:three_prime_UTR | 20.0% |
!!! | TAACTAATTTGATTTTGCAA+TGG | - | chr3_2:78433981-78434000 | None:intergenic | 20.0% |
! | AGAAAAACGAAGATGAAAAT+TGG | + | chr3_2:78429135-78429154 | Msa0427760:CDS | 25.0% |
! | GAAAAACGAAGATGAAAATT+GGG | + | chr3_2:78429136-78429155 | Msa0427760:CDS | 25.0% |
!!! | TATGATGCTGATTTTGTTTA+TGG | + | chr3_2:78429230-78429249 | Msa0427760:CDS | 25.0% |
!! | TTGATGCATTTTTCTTTGTT+GGG | + | chr3_2:78429564-78429583 | Msa0427760:CDS | 25.0% |
!! | ATATTCCTTATGATGTTTTG+TGG | + | chr3_2:78429738-78429757 | Msa0427760:CDS | 25.0% |
!! | TGAGAATTTTCATTTGCATA+AGG | + | chr3_2:78429901-78429920 | Msa0427760:CDS | 25.0% |
! | TGAAATAATAAACATACCTC+GGG | - | chr3_2:78430136-78430155 | None:intergenic | 25.0% |
! | ATGATTATCATGGAAATTGA+TGG | - | chr3_2:78430291-78430310 | None:intergenic | 25.0% |
! | TCATGTATTCATGATTATCA+TGG | - | chr3_2:78430301-78430320 | None:intergenic | 25.0% |
!! | GTAAGTCTTTATAATTTTGG+TGG | - | chr3_2:78430347-78430366 | None:intergenic | 25.0% |
! | ATAGCTAATCCTAAATTATG+AGG | - | chr3_2:78430436-78430455 | None:intergenic | 25.0% |
! | TCAAACAAGTATTCTATCTT+TGG | - | chr3_2:78430493-78430512 | None:intergenic | 25.0% |
! | AAAGCACATTAATGATGATT+GGG | - | chr3_2:78430554-78430573 | None:intergenic | 25.0% |
! | TAAAGCACATTAATGATGAT+TGG | - | chr3_2:78430555-78430574 | None:intergenic | 25.0% |
! | ATATAATCTTAGCATGTGTT+TGG | - | chr3_2:78430792-78430811 | None:intergenic | 25.0% |
! | AAACACATGCTAAGATTATA+TGG | + | chr3_2:78430791-78430810 | Msa0427760:intron | 25.0% |
! | TTGCTTCACTATAAAATTTC+GGG | - | chr3_2:78430944-78430963 | None:intergenic | 25.0% |
! | GTTGCTTCACTATAAAATTT+CGG | - | chr3_2:78430945-78430964 | None:intergenic | 25.0% |
!!! | ACTGATGATATATTGACTTT+GGG | - | chr3_2:78431721-78431740 | None:intergenic | 25.0% |
!!! | AACTGATGATATATTGACTT+TGG | - | chr3_2:78431722-78431741 | None:intergenic | 25.0% |
!! | GTCAAAAGTGATTTTATAGA+AGG | + | chr3_2:78431855-78431874 | Msa0427760:intron | 25.0% |
! | AGCGAAAAACAGAATTAATT+AGG | + | chr3_2:78432224-78432243 | Msa0427760:CDS | 25.0% |
! | GCGAAAAACAGAATTAATTA+GGG | + | chr3_2:78432225-78432244 | Msa0427760:CDS | 25.0% |
! | CTGAATAATGTGTAGTAATA+TGG | - | chr3_2:78432280-78432299 | None:intergenic | 25.0% |
! | CATATTACTACACATTATTC+AGG | + | chr3_2:78432278-78432297 | Msa0427760:CDS | 25.0% |
! | TAAAAGTAGTTTCATCAGAT+GGG | - | chr3_2:78432354-78432373 | None:intergenic | 25.0% |
! | AATATGGAAACAAACAGAAA+AGG | - | chr3_2:78432817-78432836 | None:intergenic | 25.0% |
! | CAGTAAAAAACCTAGTAATA+TGG | - | chr3_2:78432833-78432852 | None:intergenic | 25.0% |
! | AATCTACATAGTAGATATGT+GGG | - | chr3_2:78432983-78433002 | None:intergenic | 25.0% |
! | AAATCTACATAGTAGATATG+TGG | - | chr3_2:78432984-78433003 | None:intergenic | 25.0% |
!! | TCTACTATGTAGATTTTGAA+TGG | + | chr3_2:78432988-78433007 | Msa0427760:intron | 25.0% |
!! | CTACTATGTAGATTTTGAAT+GGG | + | chr3_2:78432989-78433008 | Msa0427760:intron | 25.0% |
! | ACTAGTTACAAAAGGTAATA+AGG | - | chr3_2:78433230-78433249 | None:intergenic | 25.0% |
! | AATAAAACGTCTATGGATAA+AGG | - | chr3_2:78433402-78433421 | None:intergenic | 25.0% |
! | TTGCAAAAATAAAACGTCTA+TGG | - | chr3_2:78433409-78433428 | None:intergenic | 25.0% |
!!! | AGACGTTTTATTTTTGCAAA+TGG | + | chr3_2:78433410-78433429 | Msa0427760:CDS | 25.0% |
!!! | GACGTTTTATTTTTGCAAAT+GGG | + | chr3_2:78433411-78433430 | Msa0427760:CDS | 25.0% |
!!! | ATATCAACCTTTTGATTTGA+GGG | - | chr3_2:78433560-78433579 | None:intergenic | 25.0% |
!!! | TATATCAACCTTTTGATTTG+AGG | - | chr3_2:78433561-78433580 | None:intergenic | 25.0% |
!! | GACTATCAAAATTTTGTAAC+TGG | + | chr3_2:78433667-78433686 | Msa0427760:exon | 25.0% |
! | TCAAATTAGTTAGTTAGTTC+TGG | + | chr3_2:78433989-78434008 | Msa0427760:three_prime_UTR | 25.0% |
! | ATCAAATATCGTGAAATACT+CGG | - | chr3_2:78434029-78434048 | None:intergenic | 25.0% |
AATGTCATAGCAAATGAATC+TGG | - | chr3_2:78428569-78428588 | None:intergenic | 30.0% | |
GTAATTTCCATTAACTCACA+CGG | + | chr3_2:78429086-78429105 | Msa0427760:CDS | 30.0% | |
! | GTTGATGCATTTTTCTTTGT+TGG | + | chr3_2:78429563-78429582 | Msa0427760:CDS | 30.0% |
TACTGTCTCAAAACATCTTT+CGG | - | chr3_2:78429596-78429615 | None:intergenic | 30.0% | |
CTTGATATTGAACATACTGA+CGG | + | chr3_2:78429761-78429780 | Msa0427760:CDS | 30.0% | |
TTGATATTGAACATACTGAC+GGG | + | chr3_2:78429762-78429781 | Msa0427760:CDS | 30.0% | |
TTCTCATCTCTCTTAATATG+AGG | - | chr3_2:78429887-78429906 | None:intergenic | 30.0% | |
! | GAATTTTCATTTGCATAAGG+AGG | + | chr3_2:78429904-78429923 | Msa0427760:CDS | 30.0% |
ATACTTTGAACCCTGAAATT+AGG | + | chr3_2:78430011-78430030 | Msa0427760:CDS | 30.0% | |
TCATTCCATATGTAAAGTGA+AGG | - | chr3_2:78430085-78430104 | None:intergenic | 30.0% | |
AATGAACCTTCTGTCTTTAA+TGG | + | chr3_2:78430109-78430128 | Msa0427760:CDS | 30.0% | |
ATGAATACATGAGTATGACA+TGG | + | chr3_2:78430309-78430328 | Msa0427760:intron | 30.0% | |
TTGTTAGTGCCTCATAATTT+AGG | + | chr3_2:78430424-78430443 | Msa0427760:intron | 30.0% | |
ACTTGTTTGAAAATCAGTAG+TGG | + | chr3_2:78430503-78430522 | Msa0427760:intron | 30.0% | |
! | ACTAGTAAGTATGATGATGT+TGG | - | chr3_2:78430529-78430548 | None:intergenic | 30.0% |
TCATCATTAATGTGCTTTAG+CGG | + | chr3_2:78430556-78430575 | Msa0427760:intron | 30.0% | |
AACAAATCTTCAGTCAGTTA+GGG | - | chr3_2:78430652-78430671 | None:intergenic | 30.0% | |
AAACAAATCTTCAGTCAGTT+AGG | - | chr3_2:78430653-78430672 | None:intergenic | 30.0% | |
! | TAACTGACTGAAGATTTGTT+TGG | + | chr3_2:78430652-78430671 | Msa0427760:intron | 30.0% |
GAAGCAAGAAATTGTAAAGT+TGG | + | chr3_2:78430731-78430750 | Msa0427760:intron | 30.0% | |
!!! | TTTGGAAGGTAACTTTTTCA+CGG | - | chr3_2:78430774-78430793 | None:intergenic | 30.0% |
!! | AATATTGGTTTAGCTTCACT+GGG | - | chr3_2:78430840-78430859 | None:intergenic | 30.0% |
! | ATAAAATTTCGGGTCATTGT+GGG | - | chr3_2:78430934-78430953 | None:intergenic | 30.0% |
! | TATAAAATTTCGGGTCATTG+TGG | - | chr3_2:78430935-78430954 | None:intergenic | 30.0% |
TTTATAGTGAAGCAACTTGT+TGG | + | chr3_2:78430949-78430968 | Msa0427760:intron | 30.0% | |
! | TACTTTTAATGACTGTGCAT+TGG | + | chr3_2:78431070-78431089 | Msa0427760:intron | 30.0% |
TGATTGTTTACATTGTATCC+AGG | + | chr3_2:78431115-78431134 | Msa0427760:intron | 30.0% | |
AATGCTCTTGACAAAACAAA+TGG | - | chr3_2:78431269-78431288 | None:intergenic | 30.0% | |
ATTCTTCTCATATTCAGAGT+CGG | + | chr3_2:78431446-78431465 | Msa0427760:intron | 30.0% | |
AGCTTACTATCCTTTCTTTA+GGG | + | chr3_2:78431614-78431633 | Msa0427760:CDS | 30.0% | |
TTTATAGAAGGACTTTACCA+AGG | + | chr3_2:78431867-78431886 | Msa0427760:intron | 30.0% | |
TTATAGAAGGACTTTACCAA+GGG | + | chr3_2:78431868-78431887 | Msa0427760:intron | 30.0% | |
ACAATTCAGGATCCATTTAA+CGG | - | chr3_2:78432144-78432163 | None:intergenic | 30.0% | |
CTAAAAGTAGTTTCATCAGA+TGG | - | chr3_2:78432355-78432374 | None:intergenic | 30.0% | |
!!! | TATTTTTCAGGGGAAACATA+TGG | - | chr3_2:78432784-78432803 | None:intergenic | 30.0% |
!! | CAAGAACAAGTATTTTTCAG+GGG | - | chr3_2:78432794-78432813 | None:intergenic | 30.0% |
! | GCAAGAACAAGTATTTTTCA+GGG | - | chr3_2:78432795-78432814 | None:intergenic | 30.0% |
CTGTTTGTTTCCATATTACT+AGG | + | chr3_2:78432820-78432839 | Msa0427760:intron | 30.0% | |
TACTGTTGAGTTTCTATTCA+TGG | + | chr3_2:78432848-78432867 | Msa0427760:intron | 30.0% | |
AACATCCATATTGTCAACAA+AGG | - | chr3_2:78432874-78432893 | None:intergenic | 30.0% | |
!! | GACAATTTTAGTCTGATTGA+AGG | + | chr3_2:78433031-78433050 | Msa0427760:intron | 30.0% |
!!! | CAAATGACTTTTTTCTTGCT+AGG | - | chr3_2:78433115-78433134 | None:intergenic | 30.0% |
AACTCAATCATACAGAATAC+AGG | - | chr3_2:78433186-78433205 | None:intergenic | 30.0% | |
TGTATTCTGTATGATTGAGT+TGG | + | chr3_2:78433185-78433204 | Msa0427760:intron | 30.0% | |
GTATTCTGTATGATTGAGTT+GGG | + | chr3_2:78433186-78433205 | Msa0427760:intron | 30.0% | |
TAACTGTCACTAGTTACAAA+AGG | - | chr3_2:78433238-78433257 | None:intergenic | 30.0% | |
TTTGTAACTAGTGACAGTTA+TGG | + | chr3_2:78433238-78433257 | Msa0427760:intron | 30.0% | |
! | GATTATTATGGTTCTGTGTT+TGG | + | chr3_2:78433291-78433310 | Msa0427760:intron | 30.0% |
AATCCTCTCAATAACAACAT+TGG | - | chr3_2:78433492-78433511 | None:intergenic | 30.0% | |
!! | CAAAAGGTTGATATAGAACT+TGG | + | chr3_2:78433566-78433585 | Msa0427760:CDS | 30.0% |
! | CAAAATTTTGTAACTGGTAG+TGG | + | chr3_2:78433673-78433692 | Msa0427760:exon | 30.0% |
!! | AACTGGTAGTGGAAAATATT+TGG | + | chr3_2:78433684-78433703 | Msa0427760:exon | 30.0% |
AGAAAAGAAGTCTTGAAGAA+TGG | + | chr3_2:78433756-78433775 | Msa0427760:three_prime_UTR | 30.0% | |
TTGATAAACACTGTGTTTAG+CGG | + | chr3_2:78434044-78434063 | Msa0427760:three_prime_UTR | 30.0% | |
!!! | GTTTGCATTTGAGTTTTGAG+TGG | + | chr3_2:78428392-78428411 | Msa0427760:five_prime_UTR | 35.0% |
! | GGAAATGAAGGTGTAAGATT+CGG | - | chr3_2:78428548-78428567 | None:intergenic | 35.0% |
GCAAATGAATCTGGAAATGA+AGG | - | chr3_2:78428560-78428579 | None:intergenic | 35.0% | |
!! | AGTAAGGGTTTTGATGAATC+GGG | - | chr3_2:78428807-78428826 | None:intergenic | 35.0% |
!! | GAGTAAGGGTTTTGATGAAT+CGG | - | chr3_2:78428808-78428827 | None:intergenic | 35.0% |
GTGAGTTAATGGAAATTACC+CGG | - | chr3_2:78429085-78429104 | None:intergenic | 35.0% | |
GAATAAACCGTGTGAGTTAA+TGG | - | chr3_2:78429096-78429115 | None:intergenic | 35.0% | |
! | GTCTTTTGTCAGTATGTGTT+CGG | - | chr3_2:78429172-78429191 | None:intergenic | 35.0% |
CATACTGACAAAAGACCATA+CGG | + | chr3_2:78429176-78429195 | Msa0427760:CDS | 35.0% | |
GGTTCAGATTCTTCAACATT+AGG | - | chr3_2:78429302-78429321 | None:intergenic | 35.0% | |
ATCGAACCATAAAGTCCAAA+CGG | - | chr3_2:78429371-78429390 | None:intergenic | 35.0% | |
ATTCCATTCATGCTTTCTCA+CGG | + | chr3_2:78429389-78429408 | Msa0427760:CDS | 35.0% | |
TCAATCCTATTCTGTGAAGT+AGG | - | chr3_2:78429515-78429534 | None:intergenic | 35.0% | |
AGAATAGGATTGATACGATG+TGG | + | chr3_2:78429522-78429541 | Msa0427760:CDS | 35.0% | |
TCAAGCCACAAAACATCATA+AGG | - | chr3_2:78429746-78429765 | None:intergenic | 35.0% | |
CAGAAGAAATTGGATGGTAA+GGG | + | chr3_2:78429836-78429855 | Msa0427760:CDS | 35.0% | |
!! | AGAGAAAGGGTATTACACTA+AGG | + | chr3_2:78429931-78429950 | Msa0427760:CDS | 35.0% |
TATTACACTAAGGATTCCAG+TGG | + | chr3_2:78429941-78429960 | Msa0427760:CDS | 35.0% | |
ATTACACTAAGGATTCCAGT+GGG | + | chr3_2:78429942-78429961 | Msa0427760:CDS | 35.0% | |
! | ATTTCAGGGTTCAAAGTATC+CGG | - | chr3_2:78430010-78430029 | None:intergenic | 35.0% |
CAACTCCTTCACTTTACATA+TGG | + | chr3_2:78430077-78430096 | Msa0427760:CDS | 35.0% | |
!! | GTCGTTGTTGTTTCAATTCA+AGG | + | chr3_2:78430177-78430196 | Msa0427760:intron | 35.0% |
ACAAGTATTCTATCTTTGGC+TGG | - | chr3_2:78430489-78430508 | None:intergenic | 35.0% | |
CTAATCTCACTCAAAAGAGA+AGG | + | chr3_2:78430613-78430632 | Msa0427760:intron | 35.0% | |
TTGCTTCTATATGTTCACAG+TGG | - | chr3_2:78430718-78430737 | None:intergenic | 35.0% | |
AATCTTAGCATGTGTTTGGA+AGG | - | chr3_2:78430788-78430807 | None:intergenic | 35.0% | |
CACATGCTAAGATTATATGG+TGG | + | chr3_2:78430794-78430813 | Msa0427760:intron | 35.0% | |
!! | ATGGTGGAGATTCTGAAATT+TGG | + | chr3_2:78430810-78430829 | Msa0427760:intron | 35.0% |
!! | ATATTGGTTTAGCTTCACTG+GGG | - | chr3_2:78430839-78430858 | None:intergenic | 35.0% |
!! | CAATATTGGTTTAGCTTCAC+TGG | - | chr3_2:78430841-78430860 | None:intergenic | 35.0% |
GAGCTTACTATCCTTTCTTT+AGG | + | chr3_2:78431613-78431632 | Msa0427760:CDS | 35.0% | |
CTTAATGGCAAGGAAAGTAA+TGG | - | chr3_2:78431812-78431831 | None:intergenic | 35.0% | |
AAAGGGAAAACAGCTCTTAA+TGG | - | chr3_2:78431827-78431846 | None:intergenic | 35.0% | |
AAGTGCAAACTAGTATCACA+AGG | + | chr3_2:78431966-78431985 | Msa0427760:intron | 35.0% | |
GGAAATACAGTAGGTAAGTA+TGG | - | chr3_2:78432116-78432135 | None:intergenic | 35.0% | |
TATTTCCCTTGACCGTTAAA+TGG | + | chr3_2:78432129-78432148 | Msa0427760:intron | 35.0% | |
TAAATGGATCCTGAATTGTG+TGG | + | chr3_2:78432145-78432164 | Msa0427760:intron | 35.0% | |
AAATGGATCCTGAATTGTGT+GGG | + | chr3_2:78432146-78432165 | Msa0427760:intron | 35.0% | |
TTACTACACATTATTCAGGG+AGG | + | chr3_2:78432282-78432301 | Msa0427760:CDS | 35.0% | |
TAGCAATGATGAAGCTTTCA+TGG | + | chr3_2:78432372-78432391 | Msa0427760:CDS | 35.0% | |
AATGATGAAGCTTTCATGGT+CGG | + | chr3_2:78432376-78432395 | Msa0427760:CDS | 35.0% | |
! | GGCAAGAACAAGTATTTTTC+AGG | - | chr3_2:78432796-78432815 | None:intergenic | 35.0% |
ATGGGATGCAACAAATGAAA+AGG | - | chr3_2:78433149-78433168 | None:intergenic | 35.0% | |
! | GCTCGGTGATAAGATTATTA+TGG | + | chr3_2:78433279-78433298 | Msa0427760:intron | 35.0% |
!!! | AGCAGTTTTGGTTTTCTAGA+AGG | + | chr3_2:78433374-78433393 | Msa0427760:CDS | 35.0% |
! | CATCCAATGTTGTTATTGAG+AGG | + | chr3_2:78433486-78433505 | Msa0427760:CDS | 35.0% |
GAAGTTCAACTGCAAAAGTT+AGG | + | chr3_2:78433727-78433746 | Msa0427760:three_prime_UTR | 35.0% | |
CAACTGCAAAAGTTAGGATA+AGG | + | chr3_2:78433733-78433752 | Msa0427760:three_prime_UTR | 35.0% | |
GTGCACAAATACAATTTCAG+CGG | + | chr3_2:78433781-78433800 | Msa0427760:three_prime_UTR | 35.0% | |
GAATTTGAGAGATGTATGCT+TGG | + | chr3_2:78433828-78433847 | Msa0427760:three_prime_UTR | 35.0% | |
TTCGGACAGTTGAAGAAACT+GGG | - | chr3_2:78428530-78428549 | None:intergenic | 40.0% | |
ATTCGGACAGTTGAAGAAAC+TGG | - | chr3_2:78428531-78428550 | None:intergenic | 40.0% | |
ATCTTTCTTCCAGGAGAAGA+CGG | - | chr3_2:78428649-78428668 | None:intergenic | 40.0% | |
ACGGAATTCATCTTTCTTCC+AGG | - | chr3_2:78428658-78428677 | None:intergenic | 40.0% | |
! | ATGGGGTTTGGTTACAGTTA+CGG | - | chr3_2:78428677-78428696 | None:intergenic | 40.0% |
AGATCTTCTGAATTGATGCG+TGG | - | chr3_2:78428963-78428982 | None:intergenic | 40.0% | |
GAGAGGTAAACAGAAGAAGA+AGG | - | chr3_2:78428993-78429012 | None:intergenic | 40.0% | |
ACATCGAAGCTAATCGATTG+AGG | - | chr3_2:78429203-78429222 | None:intergenic | 40.0% | |
TTCTTCAACATTAGGTCCTC+TGG | - | chr3_2:78429294-78429313 | None:intergenic | 40.0% | |
TATATTCACGATTCGCCGTT+TGG | + | chr3_2:78429353-78429372 | Msa0427760:CDS | 40.0% | |
! | TTACCGTGAGAAAGCATGAA+TGG | - | chr3_2:78429395-78429414 | None:intergenic | 40.0% |
GTTCAGCCAGAAAAAACCAT+TGG | - | chr3_2:78429429-78429448 | None:intergenic | 40.0% | |
CAAATTGATGTTCTTGCCTC+TGG | + | chr3_2:78429461-78429480 | Msa0427760:CDS | 40.0% | |
! | AGTTCTTTTCCCTAATCCTG+AGG | + | chr3_2:78429808-78429827 | Msa0427760:CDS | 40.0% |
AATTTCTTCTGCATCTCCTC+AGG | - | chr3_2:78429827-78429846 | None:intergenic | 40.0% | |
TGAGGAGATGCAGAAGAAAT+TGG | + | chr3_2:78429826-78429845 | Msa0427760:CDS | 40.0% | |
GAGATGCAGAAGAAATTGGA+TGG | + | chr3_2:78429830-78429849 | Msa0427760:CDS | 40.0% | |
GCAGAAGAAATTGGATGGTA+AGG | + | chr3_2:78429835-78429854 | Msa0427760:CDS | 40.0% | |
AGAAATTGGATGGTAAGGGA+AGG | + | chr3_2:78429840-78429859 | Msa0427760:CDS | 40.0% | |
CTTAATATGAGGATCCACGA+TGG | - | chr3_2:78429876-78429895 | None:intergenic | 40.0% | |
! | TCCAGTGGGAATGATTTTGA+TGG | + | chr3_2:78429956-78429975 | Msa0427760:CDS | 40.0% |
ACCATCAAAATCATTCCCAC+TGG | - | chr3_2:78429960-78429979 | None:intergenic | 40.0% | |
!! | GTGGGAATGATTTTGATGGT+TGG | + | chr3_2:78429960-78429979 | Msa0427760:CDS | 40.0% |
!! | ATGATTTTGATGGTTGGTGC+TGG | + | chr3_2:78429966-78429985 | Msa0427760:CDS | 40.0% |
TGAACCCTGAAATTAGGTCA+TGG | + | chr3_2:78430017-78430036 | Msa0427760:CDS | 40.0% | |
!!! | GTAACTTTTTCACGGTGTGA+AGG | - | chr3_2:78430766-78430785 | None:intergenic | 40.0% |
CGATACGTTGCTACAATTGT+CGG | + | chr3_2:78430886-78430905 | Msa0427760:intron | 40.0% | |
!! | TAGTGAAGCAACTTGTTGGT+TGG | + | chr3_2:78430953-78430972 | Msa0427760:intron | 40.0% |
GAAGTGAAGAGTCAGAATTG+CGG | - | chr3_2:78430989-78431008 | None:intergenic | 40.0% | |
! | CCATAATGTAAGGCATCTCT+AGG | - | chr3_2:78431149-78431168 | None:intergenic | 40.0% |
CCTAGAGATGCCTTACATTA+TGG | + | chr3_2:78431146-78431165 | Msa0427760:CDS | 40.0% | |
AGAGATGCCTTACATTATGG+AGG | + | chr3_2:78431149-78431168 | Msa0427760:CDS | 40.0% | |
TTCCACACCTCCATAATGTA+AGG | - | chr3_2:78431159-78431178 | None:intergenic | 40.0% | |
! | ATTATGGAGGTGTGGAACAT+CGG | + | chr3_2:78431162-78431181 | Msa0427760:CDS | 40.0% |
CATGTGGAAGTAATACCCAT+AGG | - | chr3_2:78431201-78431220 | None:intergenic | 40.0% | |
CTATGGGTATTACTTCCACA+TGG | + | chr3_2:78431199-78431218 | Msa0427760:CDS | 40.0% | |
!! | TTGTCAAGAGCATTGTTTGC+CGG | + | chr3_2:78431275-78431294 | Msa0427760:CDS | 40.0% |
! | GTCAAAGGTATGGTGCAATT+TGG | + | chr3_2:78431300-78431319 | Msa0427760:CDS | 40.0% |
!! | AACTCTAAGGTGATCCCAAT+CGG | - | chr3_2:78431342-78431361 | None:intergenic | 40.0% |
CCATAGGAACTGAAACTCTA+AGG | - | chr3_2:78431355-78431374 | None:intergenic | 40.0% | |
CCTTAGAGTTTCAGTTCCTA+TGG | + | chr3_2:78431352-78431371 | Msa0427760:CDS | 40.0% | |
ACGTTTCATGACCTTTATGC+AGG | + | chr3_2:78431525-78431544 | Msa0427760:intron | 40.0% | |
!!! | CTGATGTTGGTGGGTTTTTT+GGG | + | chr3_2:78431550-78431569 | Msa0427760:CDS | 40.0% |
AAGGATAGTAAGCTCCTAAC+TGG | - | chr3_2:78431608-78431627 | None:intergenic | 40.0% | |
! | TCGTCTTTTTGTGTCGTGAT+GGG | - | chr3_2:78431646-78431665 | None:intergenic | 40.0% |
ACACAAAAAGACGAGAACCA+TGG | + | chr3_2:78431652-78431671 | Msa0427760:CDS | 40.0% | |
GAAAACAGCTCTTAATGGCA+AGG | - | chr3_2:78431822-78431841 | None:intergenic | 40.0% | |
! | ACTCGTGAAGTTGTGGTTTT+TGG | - | chr3_2:78432001-78432020 | None:intergenic | 40.0% |
AGTGTAAACTCGTGAAGTTG+TGG | - | chr3_2:78432008-78432027 | None:intergenic | 40.0% | |
AGGATCCATTTAACGGTCAA+GGG | - | chr3_2:78432137-78432156 | None:intergenic | 40.0% | |
AACAGATTCCCACACAATTC+AGG | - | chr3_2:78432157-78432176 | None:intergenic | 40.0% | |
!! | GAATTCCATCCATAATGGAC+GGG | - | chr3_2:78432332-78432351 | None:intergenic | 40.0% |
! | GGAATTCCATCCATAATGGA+CGG | - | chr3_2:78432333-78432352 | None:intergenic | 40.0% |
GATGGGAATTCCATCCATAA+TGG | - | chr3_2:78432337-78432356 | None:intergenic | 40.0% | |
ATGATGAAGCTTTCATGGTC+GGG | + | chr3_2:78432377-78432396 | Msa0427760:CDS | 40.0% | |
!!! | GGAGCAGTATTTTAGTGCAA+GGG | + | chr3_2:78432398-78432417 | Msa0427760:CDS | 40.0% |
! | TCATACCACGATTGTTTTCC+AGG | - | chr3_2:78432569-78432588 | None:intergenic | 40.0% |
TGTACACAGTTCCAGTTCTT+AGG | - | chr3_2:78432592-78432611 | None:intergenic | 40.0% | |
AAGAACTGGAACTGTGTACA+AGG | + | chr3_2:78432592-78432611 | Msa0427760:CDS | 40.0% | |
AGAACTGGAACTGTGTACAA+GGG | + | chr3_2:78432593-78432612 | Msa0427760:CDS | 40.0% | |
ACACAAGTTAGAGGTTACAG+AGG | + | chr3_2:78432625-78432644 | Msa0427760:CDS | 40.0% | |
TGAAAACCTACCAGAGTGAA+GGG | - | chr3_2:78432737-78432756 | None:intergenic | 40.0% | |
CATGGCCTTTGTTGACAATA+TGG | + | chr3_2:78432866-78432885 | Msa0427760:intron | 40.0% | |
AGTTGAATCCTGATGCTTCT+TGG | + | chr3_2:78432900-78432919 | Msa0427760:intron | 40.0% | |
TGCAAAACATATTCTCGTCC+TGG | - | chr3_2:78432944-78432963 | None:intergenic | 40.0% | |
GTTGCATCCCATCCAAAAAA+TGG | + | chr3_2:78433157-78433176 | Msa0427760:intron | 40.0% | |
!!! | GAATACAGGCAGCCATTTTT+TGG | - | chr3_2:78433172-78433191 | None:intergenic | 40.0% |
!! | GAGTAGTCTACTAGTTTGCT+CGG | + | chr3_2:78433262-78433281 | Msa0427760:intron | 40.0% |
! | ATTATGGTTCTGTGTTTGGC+AGG | + | chr3_2:78433295-78433314 | Msa0427760:intron | 40.0% |
!!! | ATTGATGATGGCAGCAGTTT+TGG | + | chr3_2:78433362-78433381 | Msa0427760:CDS | 40.0% |
GAAACTTACTTCTGTAGACC+TGG | + | chr3_2:78433433-78433452 | Msa0427760:CDS | 40.0% | |
ATTGAGAGGATTATCGTGCT+AGG | + | chr3_2:78433500-78433519 | Msa0427760:CDS | 40.0% | |
GATTGAGCCCTCAAATCAAA+AGG | + | chr3_2:78433550-78433569 | Msa0427760:CDS | 40.0% | |
ATATAGAACTTGGACCGCTT+TGG | + | chr3_2:78433576-78433595 | Msa0427760:CDS | 40.0% | |
TATAGAACTTGGACCGCTTT+GGG | + | chr3_2:78433577-78433596 | Msa0427760:CDS | 40.0% | |
TTACGTATGGTCATGAAAGC+TGG | - | chr3_2:78433620-78433639 | None:intergenic | 40.0% | |
TAGTCCAATCTTCTGCAACA+CGG | - | chr3_2:78433652-78433671 | None:intergenic | 40.0% | |
! | AGCGGCTTGTTTAGTGATTT+AGG | + | chr3_2:78433799-78433818 | Msa0427760:three_prime_UTR | 40.0% |
! | GCGGCTTGTTTAGTGATTTA+GGG | + | chr3_2:78433800-78433819 | Msa0427760:three_prime_UTR | 40.0% |
TGTGAATCCAATGTAGCCTA+CGG | + | chr3_2:78433855-78433874 | Msa0427760:three_prime_UTR | 40.0% | |
ATTAAGTCCGTAGGCTACAT+TGG | - | chr3_2:78433865-78433884 | None:intergenic | 40.0% | |
TGTAGCCTACGGACTTAATT+TGG | + | chr3_2:78433866-78433885 | Msa0427760:three_prime_UTR | 40.0% | |
CGTTACCAAATTAAGTCCGT+AGG | - | chr3_2:78433874-78433893 | None:intergenic | 40.0% | |
GTTGAAGAAACTGGGTAGTG+TGG | - | chr3_2:78428522-78428541 | None:intergenic | 45.0% | |
GGATTTGGGGATTAGGTTAG+CGG | - | chr3_2:78428781-78428800 | None:intergenic | 45.0% | |
!! | ATGAATCGGGTTGGGATTTG+GGG | - | chr3_2:78428794-78428813 | None:intergenic | 45.0% |
!! | GATGAATCGGGTTGGGATTT+GGG | - | chr3_2:78428795-78428814 | None:intergenic | 45.0% |
!! | TGATGAATCGGGTTGGGATT+TGG | - | chr3_2:78428796-78428815 | None:intergenic | 45.0% |
!! | GGGTTTTGATGAATCGGGTT+GGG | - | chr3_2:78428802-78428821 | None:intergenic | 45.0% |
!! | AGGGTTTTGATGAATCGGGT+TGG | - | chr3_2:78428803-78428822 | None:intergenic | 45.0% |
ACTCTCTCCGTTCATCAAGA+CGG | + | chr3_2:78428831-78428850 | Msa0427760:CDS | 45.0% | |
GAGGATTCCGTCTTGATGAA+CGG | - | chr3_2:78428841-78428860 | None:intergenic | 45.0% | |
! | CGTTTTCGTCGATGATGAGA+CGG | - | chr3_2:78428863-78428882 | None:intergenic | 45.0% |
AATTCGCCAACACCAAACTC+TGG | + | chr3_2:78428934-78428953 | Msa0427760:CDS | 45.0% | |
TCTTCTGTTTACCTCTCCGA+CGG | + | chr3_2:78428996-78429015 | Msa0427760:CDS | 45.0% | |
AAAGCTCAAACGGATCGTGA+CGG | - | chr3_2:78429037-78429056 | None:intergenic | 45.0% | |
TCGCGGATGAAAAGCTCAAA+CGG | - | chr3_2:78429047-78429066 | None:intergenic | 45.0% | |
CTAATCGATTGAGGACCGTA+TGG | - | chr3_2:78429194-78429213 | None:intergenic | 45.0% | |
TCAACATTAGGTCCTCTGGT+AGG | - | chr3_2:78429290-78429309 | None:intergenic | 45.0% | |
GATTCGCCGTTTGGACTTTA+TGG | + | chr3_2:78429362-78429381 | Msa0427760:CDS | 45.0% | |
TTGATGTTCTTGCCTCTGGT+TGG | + | chr3_2:78429465-78429484 | Msa0427760:CDS | 45.0% | |
TGATGTTCTTGCCTCTGGTT+GGG | + | chr3_2:78429466-78429485 | Msa0427760:CDS | 45.0% | |
CGCTTCCTACTTCACAGAAT+AGG | + | chr3_2:78429507-78429526 | Msa0427760:CDS | 45.0% | |
! | CATTTTTCTTTGTTGGGCCG+CGG | + | chr3_2:78429570-78429589 | Msa0427760:CDS | 45.0% |
ATTGCCTCAGATGTTTGCAG+TGG | + | chr3_2:78429640-78429659 | Msa0427760:CDS | 45.0% | |
TAAGCCACTGCAAACATCTG+AGG | - | chr3_2:78429647-78429666 | None:intergenic | 45.0% | |
CAGTGGCTTATCATCAGTGT+CGG | + | chr3_2:78429657-78429676 | Msa0427760:CDS | 45.0% | |
TCGGTGGAATTATCGTGATG+AGG | + | chr3_2:78429676-78429695 | Msa0427760:CDS | 45.0% | |
GTGGAATTATCGTGATGAGG+AGG | + | chr3_2:78429679-78429698 | Msa0427760:CDS | 45.0% | |
TTGAACATACTGACGGGAAG+AGG | + | chr3_2:78429768-78429787 | Msa0427760:CDS | 45.0% | |
!!! | ACGGGAAGAGGTATTTTACC+TGG | + | chr3_2:78429780-78429799 | Msa0427760:CDS | 45.0% |
!!! | CGGGAAGAGGTATTTTACCT+GGG | + | chr3_2:78429781-78429800 | Msa0427760:CDS | 45.0% |
AGGGAAAAGAACTCTATCCC+AGG | - | chr3_2:78429801-78429820 | None:intergenic | 45.0% | |
TCTGCATCTCCTCAGGATTA+GGG | - | chr3_2:78429820-78429839 | None:intergenic | 45.0% | |
TTCTGCATCTCCTCAGGATT+AGG | - | chr3_2:78429821-78429840 | None:intergenic | 45.0% | |
!! | ATAAGGAGGCGTCAGAGAAA+GGG | + | chr3_2:78429918-78429937 | Msa0427760:CDS | 45.0% |
! | AGGGTTCAAAGTATCCGGAT+AGG | - | chr3_2:78430005-78430024 | None:intergenic | 45.0% |
ACCCTGAAATTAGGTCATGG+TGG | + | chr3_2:78430020-78430039 | Msa0427760:CDS | 45.0% | |
CCCACCATGACCTAATTTCA+GGG | - | chr3_2:78430024-78430043 | None:intergenic | 45.0% | |
CCCTGAAATTAGGTCATGGT+GGG | + | chr3_2:78430021-78430040 | Msa0427760:CDS | 45.0% | |
TCGGGACCATTAAAGACAGA+AGG | - | chr3_2:78430118-78430137 | None:intergenic | 45.0% | |
TTCTGTCTTTAATGGTCCCG+AGG | + | chr3_2:78430117-78430136 | Msa0427760:CDS | 45.0% | |
TGTGGGTGAATTCGGCATAA+TGG | - | chr3_2:78430917-78430936 | None:intergenic | 45.0% | |
GTCACTTGAGAAGAAGAGCT+TGG | + | chr3_2:78431037-78431056 | Msa0427760:intron | 45.0% | |
AGAAGAAGAGCTTGGATCTG+TGG | + | chr3_2:78431045-78431064 | Msa0427760:intron | 45.0% | |
GAAGAAGAGCTTGGATCTGT+GGG | + | chr3_2:78431046-78431065 | Msa0427760:intron | 45.0% | |
TGCCTTACATTATGGAGGTG+TGG | + | chr3_2:78431154-78431173 | Msa0427760:CDS | 45.0% | |
! | TTATGGAGGTGTGGAACATC+GGG | + | chr3_2:78431163-78431182 | Msa0427760:CDS | 45.0% |
GGGAGTTGCATAATGCCTAT+GGG | + | chr3_2:78431183-78431202 | Msa0427760:CDS | 45.0% | |
TTCCACATGGCAACATCTGA+AGG | + | chr3_2:78431212-78431231 | Msa0427760:CDS | 45.0% | |
TCCACATGGCAACATCTGAA+GGG | + | chr3_2:78431213-78431232 | Msa0427760:CDS | 45.0% | |
CATTGTTTGCCGGAAGTCAA+AGG | + | chr3_2:78431285-78431304 | Msa0427760:CDS | 45.0% | |
TTTGCCGGAAGTCAAAGGTA+TGG | + | chr3_2:78431290-78431309 | Msa0427760:CDS | 45.0% | |
! | TGCACCATACCTTTGACTTC+CGG | - | chr3_2:78431297-78431316 | None:intergenic | 45.0% |
AGGTATGGTGCAATTTGGAC+TGG | + | chr3_2:78431305-78431324 | Msa0427760:CDS | 45.0% | |
!!! | GTTCCTATGGTTTTGACCCT+TGG | + | chr3_2:78431365-78431384 | Msa0427760:CDS | 45.0% |
AGACCAAGGGTCAAAACCAT+AGG | - | chr3_2:78431371-78431390 | None:intergenic | 45.0% | |
!!! | GTTTTGACCCTTGGTCTTAC+CGG | + | chr3_2:78431374-78431393 | Msa0427760:CDS | 45.0% |
!!! | TTTTGACCCTTGGTCTTACC+GGG | + | chr3_2:78431375-78431394 | Msa0427760:CDS | 45.0% |
CAACATCAGCACCTGCATAA+AGG | - | chr3_2:78431539-78431558 | None:intergenic | 45.0% | |
!! | CTTTATGCAGGTGCTGATGT+TGG | + | chr3_2:78431537-78431556 | Msa0427760:intron | 45.0% |
!!! | GCTGATGTTGGTGGGTTTTT+TGG | + | chr3_2:78431549-78431568 | Msa0427760:CDS | 45.0% |
!!! | TGGTGGGTTTTTTGGGAATC+CGG | + | chr3_2:78431557-78431576 | Msa0427760:CDS | 45.0% |
GAATCCGGATCCTGAGTTAT+TGG | + | chr3_2:78431572-78431591 | Msa0427760:CDS | 45.0% | |
!!! | TTTTGTGTCGTGATGGGCAT+GGG | - | chr3_2:78431640-78431659 | None:intergenic | 45.0% |
!!! | TTTTTGTGTCGTGATGGGCA+TGG | - | chr3_2:78431641-78431660 | None:intergenic | 45.0% |
! | CTCGTCTTTTTGTGTCGTGA+TGG | - | chr3_2:78431647-78431666 | None:intergenic | 45.0% |
AGACGAGAACCATGGTTGTT+TGG | + | chr3_2:78431660-78431679 | Msa0427760:CDS | 45.0% | |
GACGAGAACCATGGTTGTTT+GGG | + | chr3_2:78431661-78431680 | Msa0427760:CDS | 45.0% | |
AGAACCATGGTTGTTTGGGT+AGG | + | chr3_2:78431665-78431684 | Msa0427760:intron | 45.0% | |
CAATCCTACCCAAACAACCA+TGG | - | chr3_2:78431672-78431691 | None:intergenic | 45.0% | |
TTGTACAGTGGTTCATCCCT+TGG | - | chr3_2:78431887-78431906 | None:intergenic | 45.0% | |
ACGGTCAAGGGAAATACAGT+AGG | - | chr3_2:78432125-78432144 | None:intergenic | 45.0% | |
CAGGATCCATTTAACGGTCA+AGG | - | chr3_2:78432138-78432157 | None:intergenic | 45.0% | |
!!! | GGGAGCAGTATTTTAGTGCA+AGG | + | chr3_2:78432397-78432416 | Msa0427760:CDS | 45.0% |
AGTGCAAGGGATCTATACTG+AGG | + | chr3_2:78432411-78432430 | Msa0427760:CDS | 45.0% | |
CAGATAGACTGATGCATGCT+TGG | - | chr3_2:78432546-78432565 | None:intergenic | 45.0% | |
ATCTGCCTGGAAAACAATCG+TGG | + | chr3_2:78432561-78432580 | Msa0427760:CDS | 45.0% | |
TCGTGGTATGACCTAAGAAC+TGG | + | chr3_2:78432578-78432597 | Msa0427760:CDS | 45.0% | |
TTAGAATGGTTCCAGCTCTC+TGG | - | chr3_2:78432667-78432686 | None:intergenic | 45.0% | |
TGGAACCATTCTAACGAGGA+AGG | + | chr3_2:78432673-78432692 | Msa0427760:CDS | 45.0% | |
GGGATCATTTGTCATCTGAC+TGG | - | chr3_2:78432717-78432736 | None:intergenic | 45.0% | |
GACAAATGATCCCTTCACTC+TGG | + | chr3_2:78432724-78432743 | Msa0427760:CDS | 45.0% | |
AATGATCCCTTCACTCTGGT+AGG | + | chr3_2:78432728-78432747 | Msa0427760:intron | 45.0% | |
CTGAAAACCTACCAGAGTGA+AGG | - | chr3_2:78432738-78432757 | None:intergenic | 45.0% | |
! | CTTCACTCTGGTAGGTTTTC+AGG | + | chr3_2:78432736-78432755 | Msa0427760:intron | 45.0% |
!!! | CAGGCAGCCATTTTTTGGAT+GGG | - | chr3_2:78433167-78433186 | None:intergenic | 45.0% |
!!! | ACAGGCAGCCATTTTTTGGA+TGG | - | chr3_2:78433168-78433187 | None:intergenic | 45.0% |
AATAGTTCCCAAGCAGCTGA+AGG | + | chr3_2:78433329-78433348 | Msa0427760:CDS | 45.0% | |
CAATTCACCTTCAGCTGCTT+GGG | - | chr3_2:78433339-78433358 | None:intergenic | 45.0% | |
CGAACATTTCCACCAGAAGT+AGG | - | chr3_2:78433461-78433480 | None:intergenic | 45.0% | |
TTTGCCCTTTGAACCCAAAG+CGG | - | chr3_2:78433593-78433612 | None:intergenic | 45.0% | |
ACGGACATTGGGTTTACGTA+TGG | - | chr3_2:78433633-78433652 | None:intergenic | 45.0% | |
TCTTCTGCAACACGGACATT+GGG | - | chr3_2:78433644-78433663 | None:intergenic | 45.0% | |
ATCTTCTGCAACACGGACAT+TGG | - | chr3_2:78433645-78433664 | None:intergenic | 45.0% | |
ATGTCCGTGTTGCAGAAGAT+TGG | + | chr3_2:78433645-78433664 | Msa0427760:CDS | 45.0% | |
! | TCTGGAATGGTCATCTGTGT+TGG | + | chr3_2:78433907-78433926 | Msa0427760:three_prime_UTR | 45.0% |
TTTCTTCCAGGAGAAGACGG+TGG | - | chr3_2:78428646-78428665 | None:intergenic | 50.0% | |
ATCGAGCGCGTTTGCAGAAT+GGG | - | chr3_2:78428695-78428714 | None:intergenic | 50.0% | |
ACGGAGAGAGTGAGGAGTAA+GGG | - | chr3_2:78428822-78428841 | None:intergenic | 50.0% | |
AACGGAGAGAGTGAGGAGTA+AGG | - | chr3_2:78428823-78428842 | None:intergenic | 50.0% | |
CTTGATGAACGGAGAGAGTG+AGG | - | chr3_2:78428830-78428849 | None:intergenic | 50.0% | |
TTTCGTCGATGATGAGACGG+AGG | - | chr3_2:78428860-78428879 | None:intergenic | 50.0% | |
AATTGCGAAACGACGACGTC+GGG | - | chr3_2:78428918-78428937 | None:intergenic | 50.0% | |
GAATTGCGAAACGACGACGT+CGG | - | chr3_2:78428919-78428938 | None:intergenic | 50.0% | |
!! | TGGAAGCCAGAGTTTGGTGT+TGG | - | chr3_2:78428943-78428962 | None:intergenic | 50.0% |
GATTACAGCGGAGTAACCGT+CGG | - | chr3_2:78429015-78429034 | None:intergenic | 50.0% | |
TTCATCCGCGACGATAACTC+CGG | + | chr3_2:78429056-78429075 | Msa0427760:CDS | 50.0% | |
AATGGAAATTACCCGGTCGC+CGG | - | chr3_2:78429078-78429097 | None:intergenic | 50.0% | |
GCAAGACTCGTAGCATGTTC+GGG | - | chr3_2:78429260-78429279 | None:intergenic | 50.0% | |
CGCAAGACTCGTAGCATGTT+CGG | - | chr3_2:78429261-78429280 | None:intergenic | 50.0% | |
CTTGCGTTGAAACCTACCAG+AGG | + | chr3_2:78429275-78429294 | Msa0427760:CDS | 50.0% | |
TGCTTTCTCACGGTAAAGCG+AGG | + | chr3_2:78429399-78429418 | Msa0427760:CDS | 50.0% | |
GCTTTCTCACGGTAAAGCGA+GGG | + | chr3_2:78429400-78429419 | Msa0427760:CDS | 50.0% | |
CTTTCTCACGGTAAAGCGAG+GGG | + | chr3_2:78429401-78429420 | Msa0427760:CDS | 50.0% | |
TTTCTCACGGTAAAGCGAGG+GGG | + | chr3_2:78429402-78429421 | Msa0427760:CDS | 50.0% | |
!!! | GGGGGACCAATGGTTTTTTC+TGG | + | chr3_2:78429420-78429439 | Msa0427760:CDS | 50.0% |
ACGATGTGGATGAGTGAAGC+TGG | + | chr3_2:78429536-78429555 | Msa0427760:CDS | 50.0% | |
CTCAAAACATCTTTCGGCCG+CGG | - | chr3_2:78429590-78429609 | None:intergenic | 50.0% | |
GAGACAGTATGCTGCTGTGA+CGG | + | chr3_2:78429607-78429626 | Msa0427760:CDS | 50.0% | |
AGACAGTATGCTGCTGTGAC+GGG | + | chr3_2:78429608-78429627 | Msa0427760:CDS | 50.0% | |
! | TGGCTTATCATCAGTGTCGG+TGG | + | chr3_2:78429660-78429679 | Msa0427760:CDS | 50.0% |
!! | CATAAGGAGGCGTCAGAGAA+AGG | + | chr3_2:78429917-78429936 | Msa0427760:CDS | 50.0% |
GCCCACCATGACCTAATTTC+AGG | - | chr3_2:78430025-78430044 | None:intergenic | 50.0% | |
GTTCACAGTGGAAACGCACT+AGG | - | chr3_2:78430706-78430725 | None:intergenic | 50.0% | |
TCACGGTGTGAAGGTGAGTT+TGG | - | chr3_2:78430757-78430776 | None:intergenic | 50.0% | |
CGGGTCATTGTGGGTGAATT+CGG | - | chr3_2:78430925-78430944 | None:intergenic | 50.0% | |
AGAGTCAGAATTGCGGACAC+AGG | - | chr3_2:78430982-78431001 | None:intergenic | 50.0% | |
! | CATCTCTAGGCATTGTCACC+TGG | - | chr3_2:78431136-78431155 | None:intergenic | 50.0% |
CGGGAGTTGCATAATGCCTA+TGG | + | chr3_2:78431182-78431201 | Msa0427760:CDS | 50.0% | |
TCTGAAGGGCTATTGAAGCG+TGG | + | chr3_2:78431227-78431246 | Msa0427760:CDS | 50.0% | |
GGCTATTGAAGCGTGGTGAA+GGG | + | chr3_2:78431234-78431253 | Msa0427760:CDS | 50.0% | |
! | TGGCGATAACTCTGCCGATT+GGG | + | chr3_2:78431325-78431344 | Msa0427760:CDS | 50.0% |
TGACATCCCGGTAAGACCAA+GGG | - | chr3_2:78431384-78431403 | None:intergenic | 50.0% | |
ATGACATCCCGGTAAGACCA+AGG | - | chr3_2:78431385-78431404 | None:intergenic | 50.0% | |
CTTACCGGGATGTCATTCTC+TGG | + | chr3_2:78431389-78431408 | Msa0427760:CDS | 50.0% | |
CTGACCAGAGAATGACATCC+CGG | - | chr3_2:78431396-78431415 | None:intergenic | 50.0% | |
!! | TATGCAGGTGCTGATGTTGG+TGG | + | chr3_2:78431540-78431559 | Msa0427760:intron | 50.0% |
!! | ATGCAGGTGCTGATGTTGGT+GGG | + | chr3_2:78431541-78431560 | Msa0427760:intron | 50.0% |
CGGACCAATAACTCAGGATC+CGG | - | chr3_2:78431579-78431598 | None:intergenic | 50.0% | |
ATCCTGAGTTATTGGTCCGC+TGG | + | chr3_2:78431580-78431599 | Msa0427760:CDS | 50.0% | |
TACCAGCGGACCAATAACTC+AGG | - | chr3_2:78431585-78431604 | None:intergenic | 50.0% | |
AAGCTCCTAACTGGTACCAG+CGG | - | chr3_2:78431599-78431618 | None:intergenic | 50.0% | |
! | AGACTTTTCCCCACATGCTC+AGG | + | chr3_2:78432031-78432050 | Msa0427760:intron | 50.0% |
! | GACTTTTCCCCACATGCTCA+GGG | + | chr3_2:78432032-78432051 | Msa0427760:intron | 50.0% |
! | ACTTTTCCCCACATGCTCAG+GGG | + | chr3_2:78432033-78432052 | Msa0427760:intron | 50.0% |
TTCAGGGAGGCTAACACTAC+TGG | + | chr3_2:78432295-78432314 | Msa0427760:CDS | 50.0% | |
TAACACTACTGGCGTTCCTG+TGG | + | chr3_2:78432306-78432325 | Msa0427760:CDS | 50.0% | |
CATGCATCAGTCTATCTGCC+TGG | + | chr3_2:78432548-78432567 | Msa0427760:CDS | 50.0% | |
ACTGGAACTGTGTACAAGGG+AGG | + | chr3_2:78432596-78432615 | Msa0427760:CDS | 50.0% | |
CTGGAACTGTGTACAAGGGA+GGG | + | chr3_2:78432597-78432616 | Msa0427760:CDS | 50.0% | |
TGGAACTGTGTACAAGGGAG+GGG | + | chr3_2:78432598-78432617 | Msa0427760:CDS | 50.0% | |
AGGGGTGACACACAAGTTAG+AGG | + | chr3_2:78432616-78432635 | Msa0427760:CDS | 50.0% | |
ATTCCTGCTTTCCAGAGAGC+TGG | + | chr3_2:78432653-78432672 | Msa0427760:CDS | 50.0% | |
GAGCTGGAACCATTCTAACG+AGG | + | chr3_2:78432669-78432688 | Msa0427760:CDS | 50.0% | |
CCATTCTAACGAGGAAGGAC+CGG | + | chr3_2:78432678-78432697 | Msa0427760:CDS | 50.0% | |
! | TAACGAGGAAGGACCGGTTT+CGG | + | chr3_2:78432684-78432703 | Msa0427760:CDS | 50.0% |
!! | GCATGATGCCAAGAAGCATC+AGG | - | chr3_2:78432911-78432930 | None:intergenic | 50.0% |
GATGTACACACATGCAGGCA+CGG | - | chr3_2:78433093-78433112 | None:intergenic | 50.0% | |
GCTAGGATGTACACACATGC+AGG | - | chr3_2:78433098-78433117 | None:intergenic | 50.0% | |
!! | TTGAGTTGGGAAATGCTGCG+TGG | + | chr3_2:78433199-78433218 | Msa0427760:intron | 50.0% |
ATCGTGCTAGGTCATGCTCA+TGG | + | chr3_2:78433512-78433531 | Msa0427760:CDS | 50.0% | |
! | TTGGACCGCTTTGGGTTCAA+AGG | + | chr3_2:78433585-78433604 | Msa0427760:CDS | 50.0% |
! | TGGACCGCTTTGGGTTCAAA+GGG | + | chr3_2:78433586-78433605 | Msa0427760:CDS | 50.0% |
GGAGTGTGAAACGCAGCGTT+TGG | - | chr3_2:78428608-78428627 | None:intergenic | 55.0% | |
CGGTGGTGCAGAGAAGAAGA+AGG | - | chr3_2:78428629-78428648 | None:intergenic | 55.0% | |
CGCGTTTGCAGAATGGGGTT+TGG | - | chr3_2:78428689-78428708 | None:intergenic | 55.0% | |
TCGAGCGCGTTTGCAGAATG+GGG | - | chr3_2:78428694-78428713 | None:intergenic | 55.0% | |
GATCGAGCGCGTTTGCAGAA+TGG | - | chr3_2:78428696-78428715 | None:intergenic | 55.0% | |
GATGAGGTCAGAGGAACCAG+GGG | - | chr3_2:78428724-78428743 | None:intergenic | 55.0% | |
CGATGAGGTCAGAGGAACCA+GGG | - | chr3_2:78428725-78428744 | None:intergenic | 55.0% | |
! | CGGGTTGGGATTTGGGGATT+AGG | - | chr3_2:78428788-78428807 | None:intergenic | 55.0% |
!! | GACGTGGAAGCGTTTCTTGG+AGG | - | chr3_2:78428895-78428914 | None:intergenic | 55.0% |
ATTGCGAAACGACGACGTCG+GGG | - | chr3_2:78428917-78428936 | None:intergenic | 55.0% | |
GATGCGTGGAAGCCAGAGTT+TGG | - | chr3_2:78428949-78428968 | None:intergenic | 55.0% | |
!! | CGGATCGTGACGGATTACAG+CGG | - | chr3_2:78429027-78429046 | None:intergenic | 55.0% |
CTCTGGTTGGGATGCTGAGT+CGG | + | chr3_2:78429478-78429497 | Msa0427760:CDS | 55.0% | |
TCTGGTTGGGATGCTGAGTC+GGG | + | chr3_2:78429479-78429498 | Msa0427760:CDS | 55.0% | |
AAGGCGCATGGTTACCATCG+TGG | + | chr3_2:78429859-78429878 | Msa0427760:CDS | 55.0% | |
!! | TTTGATGGTTGGTGCTGGCC+TGG | + | chr3_2:78429971-78429990 | Msa0427760:CDS | 55.0% |
! | GCCTGGTTCTTCGTCCTATC+CGG | + | chr3_2:78429988-78430007 | Msa0427760:CDS | 55.0% |
TCCGGATAGGACGAAGAACC+AGG | - | chr3_2:78429992-78430011 | None:intergenic | 55.0% | |
AACGCACTAGGACGCGAGAA+TGG | - | chr3_2:78430694-78430713 | None:intergenic | 55.0% | |
GCCCTTCAGATGTTGCCATG+TGG | - | chr3_2:78431217-78431236 | None:intergenic | 55.0% | |
GGGCTATTGAAGCGTGGTGA+AGG | + | chr3_2:78431233-78431252 | Msa0427760:CDS | 55.0% | |
AGCGTGGTGAAGGGAAAGAC+AGG | + | chr3_2:78431243-78431262 | Msa0427760:CDS | 55.0% | |
CTGGCGATAACTCTGCCGAT+TGG | + | chr3_2:78431324-78431343 | Msa0427760:CDS | 55.0% | |
TTGGTCCGCTGGTACCAGTT+AGG | + | chr3_2:78431591-78431610 | Msa0427760:CDS | 55.0% | |
TGGGCATGGGCCCTAAAGAA+AGG | - | chr3_2:78431627-78431646 | None:intergenic | 55.0% | |
! | CTTTTCCCCACATGCTCAGG+GGG | + | chr3_2:78432034-78432053 | Msa0427760:intron | 55.0% |
! | TTTTCCCCACATGCTCAGGG+GGG | + | chr3_2:78432035-78432054 | Msa0427760:intron | 55.0% |
TTAACCCCCCTGAGCATGTG+GGG | - | chr3_2:78432042-78432061 | None:intergenic | 55.0% | |
CTTAACCCCCCTGAGCATGT+GGG | - | chr3_2:78432043-78432062 | None:intergenic | 55.0% | |
ACTTAACCCCCCTGAGCATG+TGG | - | chr3_2:78432044-78432063 | None:intergenic | 55.0% | |
TTCCTGTGGCCCGTCCATTA+TGG | + | chr3_2:78432320-78432339 | Msa0427760:CDS | 55.0% | |
!! | ATCCATAATGGACGGGCCAC+AGG | - | chr3_2:78432325-78432344 | None:intergenic | 55.0% |
TGTGGCCCGTCCATTATGGA+TGG | + | chr3_2:78432324-78432343 | Msa0427760:CDS | 55.0% | |
! | GTTCCAGCTCTCTGGAAAGC+AGG | - | chr3_2:78432659-78432678 | None:intergenic | 55.0% |
CCGGTCCTTCCTCGTTAGAA+TGG | - | chr3_2:78432681-78432700 | None:intergenic | 55.0% | |
GACTGGAACTTCGCCGAAAC+CGG | - | chr3_2:78432700-78432719 | None:intergenic | 55.0% | |
CATCATGCCTTCAGCAGTCC+AGG | + | chr3_2:78432923-78432942 | Msa0427760:intron | 55.0% | |
TTCTCGTCCTGGACTGCTGA+AGG | - | chr3_2:78432933-78432952 | None:intergenic | 55.0% | |
GTAGACCTGGCACCTACTTC+TGG | + | chr3_2:78433446-78433465 | Msa0427760:CDS | 55.0% | |
TTCCACCAGAAGTAGGTGCC+AGG | - | chr3_2:78433454-78433473 | None:intergenic | 55.0% | |
TCTGCACCACCGTCTTCTCC+TGG | + | chr3_2:78428637-78428656 | Msa0427760:CDS | 60.0% | |
GCGATGAGGTCAGAGGAACC+AGG | - | chr3_2:78428726-78428745 | None:intergenic | 60.0% | |
ACCCACGTCACCATCTCCGA+CGG | + | chr3_2:78428747-78428766 | Msa0427760:CDS | 60.0% | |
GTTAGCGGTGAGATCGCCGT+CGG | - | chr3_2:78428766-78428785 | None:intergenic | 60.0% | |
!! | GGGGACGTGGAAGCGTTTCT+TGG | - | chr3_2:78428898-78428917 | None:intergenic | 60.0% |
GGTAAAGCGAGGGGGACCAA+TGG | + | chr3_2:78429410-78429429 | Msa0427760:CDS | 60.0% | |
CGACTCAGCATCCCAACCAG+AGG | - | chr3_2:78429480-78429499 | None:intergenic | 60.0% | |
CTGGTTGGGATGCTGAGTCG+GGG | + | chr3_2:78429480-78429499 | Msa0427760:CDS | 60.0% | |
! | CAGTATGCTGCTGTGACGGG+AGG | + | chr3_2:78429611-78429630 | Msa0427760:CDS | 60.0% |
! | TGCTGCTGTGACGGGAGGTT+CGG | + | chr3_2:78429616-78429635 | Msa0427760:CDS | 60.0% |
! | GGATGGTAAGGGAAGGCGCA+TGG | + | chr3_2:78429847-78429866 | Msa0427760:CDS | 60.0% |
GACCTGGCACCTACTTCTGG+TGG | + | chr3_2:78433449-78433468 | Msa0427760:CDS | 60.0% | |
GTGGGTGGCGATGAGGTCAG+AGG | - | chr3_2:78428733-78428752 | None:intergenic | 65.0% | |
! | TGGTGACGTGGGTGGCGATG+AGG | - | chr3_2:78428740-78428759 | None:intergenic | 65.0% |
! | GTCGGAGATGGTGACGTGGG+TGG | - | chr3_2:78428748-78428767 | None:intergenic | 65.0% |
! | GCCGTCGGAGATGGTGACGT+GGG | - | chr3_2:78428751-78428770 | None:intergenic | 65.0% |
GGTGAGATCGCCGTCGGAGA+TGG | - | chr3_2:78428760-78428779 | None:intergenic | 65.0% | |
AAACGACGACGTCGGGGACG+TGG | - | chr3_2:78428911-78428930 | None:intergenic | 65.0% | |
CAGCGGAGTAACCGTCGGAG+AGG | - | chr3_2:78429010-78429029 | None:intergenic | 65.0% | |
GGTCGCCGGAGTTATCGTCG+CGG | - | chr3_2:78429064-78429083 | None:intergenic | 65.0% | |
GCGACGATAACTCCGGCGAC+CGG | + | chr3_2:78429063-78429082 | Msa0427760:CDS | 65.0% | |
CGACGATAACTCCGGCGACC+GGG | + | chr3_2:78429064-78429083 | Msa0427760:CDS | 65.0% | |
! | CGCCGTCGGAGATGGTGACG+TGG | - | chr3_2:78428752-78428771 | None:intergenic | 70.0% |
CGCGCTCGATCTCGCTCCCC+TGG | + | chr3_2:78428705-78428724 | Msa0427760:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 78428359 | 78434122 | 78428359 | ID=Msa0427760;Name=Msa0427760 |
chr3_2 | mRNA | 78428359 | 78434122 | 78428359 | ID=Msa0427760-mRNA-1;Parent=Msa0427760;Name=Msa0427760-mRNA-1;_AED=0.02;_eAED=0.02;_QI=238|1|1|1|1|1|6|437|912 |
chr3_2 | exon | 78428359 | 78430138 | 78428359 | ID=Msa0427760-mRNA-1:exon:20720;Parent=Msa0427760-mRNA-1 |
chr3_2 | exon | 78431137 | 78431410 | 78431137 | ID=Msa0427760-mRNA-1:exon:20721;Parent=Msa0427760-mRNA-1 |
chr3_2 | exon | 78431547 | 78431682 | 78431547 | ID=Msa0427760-mRNA-1:exon:20722;Parent=Msa0427760-mRNA-1 |
chr3_2 | exon | 78432222 | 78432432 | 78432222 | ID=Msa0427760-mRNA-1:exon:20723;Parent=Msa0427760-mRNA-1 |
chr3_2 | exon | 78432539 | 78432745 | 78432539 | ID=Msa0427760-mRNA-1:exon:20724;Parent=Msa0427760-mRNA-1 |
chr3_2 | exon | 78433317 | 78434122 | 78433317 | ID=Msa0427760-mRNA-1:exon:20725;Parent=Msa0427760-mRNA-1 |
chr3_2 | five_prime_UTR | 78428359 | 78428596 | 78428359 | ID=Msa0427760-mRNA-1:five_prime_utr;Parent=Msa0427760-mRNA-1 |
chr3_2 | CDS | 78428597 | 78430138 | 78428597 | ID=Msa0427760-mRNA-1:cds;Parent=Msa0427760-mRNA-1 |
chr3_2 | CDS | 78431137 | 78431410 | 78431137 | ID=Msa0427760-mRNA-1:cds;Parent=Msa0427760-mRNA-1 |
chr3_2 | CDS | 78431547 | 78431682 | 78431547 | ID=Msa0427760-mRNA-1:cds;Parent=Msa0427760-mRNA-1 |
chr3_2 | CDS | 78432222 | 78432432 | 78432222 | ID=Msa0427760-mRNA-1:cds;Parent=Msa0427760-mRNA-1 |
chr3_2 | CDS | 78432539 | 78432745 | 78432539 | ID=Msa0427760-mRNA-1:cds;Parent=Msa0427760-mRNA-1 |
chr3_2 | CDS | 78433317 | 78433685 | 78433317 | ID=Msa0427760-mRNA-1:cds;Parent=Msa0427760-mRNA-1 |
chr3_2 | three_prime_UTR | 78433686 | 78434122 | 78433686 | ID=Msa0427760-mRNA-1:three_prime_utr;Parent=Msa0427760-mRNA-1 |
Gene Sequence |
Protein sequence |