Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0184290 | XP_003594254.2 | 96.624 | 474 | 16 | 0 | 1 | 474 | 1 | 474 | 0.0 | 934 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0184290 | sp|Q8W034|RNP1_ARATH | 56.614 | 189 | 80 | 1 | 2 | 188 | 4 | 192 | 2.64e-73 | 241 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0184290 | G7IP95 | 96.624 | 474 | 16 | 0 | 1 | 474 | 1 | 474 | 0.0 | 934 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0184290 | Msa0277340 | 0.844677 | 6.517298e-59 | -8.615850e-47 |
Msa0184290 | Msa0317120 | 0.959749 | 8.720906e-118 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0184290 | MtrunA17_Chr2g0290191 | 96.624 | 474 | 16 | 0 | 1 | 474 | 1 | 474 | 0.0 | 934 |
Msa0184290 | MtrunA17_Chr5g0447761 | 57.783 | 469 | 189 | 7 | 2 | 467 | 4 | 466 | 4.86e-166 | 479 |
Msa0184290 | MtrunA17_Chr3g0101061 | 55.252 | 476 | 192 | 11 | 2 | 467 | 38 | 502 | 3.64e-160 | 465 |
Msa0184290 | MtrunA17_Chr1g0186351 | 60.204 | 196 | 64 | 2 | 2 | 188 | 4 | 194 | 3.32e-79 | 255 |
Msa0184290 | MtrunA17_Chr3g0135111 | 51.852 | 189 | 86 | 1 | 2 | 185 | 8 | 196 | 1.58e-56 | 193 |
Msa0184290 | MtrunA17_Chr3g0120721 | 39.891 | 183 | 95 | 2 | 3 | 184 | 17 | 185 | 4.22e-44 | 159 |
Msa0184290 | MtrunA17_Chr6g0449481 | 31.965 | 341 | 162 | 7 | 3 | 339 | 44 | 318 | 3.62e-41 | 152 |
Msa0184290 | MtrunA17_Chr5g0402191 | 36.000 | 200 | 111 | 4 | 1 | 198 | 1 | 185 | 8.67e-35 | 135 |
Msa0184290 | MtrunA17_Chr5g0402191 | 27.358 | 212 | 122 | 4 | 5 | 185 | 93 | 303 | 1.27e-19 | 90.9 |
Msa0184290 | MtrunA17_Chr5g0402191 | 37.500 | 112 | 67 | 1 | 5 | 113 | 226 | 337 | 9.54e-12 | 67.0 |
Msa0184290 | MtrunA17_Chr8g0375101 | 36.408 | 206 | 112 | 5 | 1 | 202 | 1 | 191 | 1.07e-33 | 131 |
Msa0184290 | MtrunA17_Chr3g0144311 | 30.588 | 170 | 91 | 5 | 5 | 168 | 30 | 178 | 4.84e-20 | 90.5 |
Msa0184290 | MtrunA17_Chr5g0426311 | 50.000 | 68 | 33 | 1 | 5 | 71 | 17 | 84 | 4.58e-19 | 87.4 |
Msa0184290 | MtrunA17_Chr8g0346011 | 36.885 | 122 | 73 | 2 | 5 | 125 | 38 | 156 | 3.13e-18 | 85.5 |
Msa0184290 | MtrunA17_Chr3g0127751 | 42.169 | 83 | 47 | 1 | 5 | 86 | 27 | 109 | 8.06e-18 | 83.2 |
Msa0184290 | MtrunA17_Chr4g0058151 | 30.978 | 184 | 106 | 4 | 5 | 181 | 123 | 292 | 1.28e-17 | 83.6 |
Msa0184290 | MtrunA17_Chr4g0058151 | 32.540 | 126 | 81 | 2 | 102 | 226 | 118 | 240 | 1.20e-11 | 65.9 |
Msa0184290 | MtrunA17_Chr4g0045921 | 29.016 | 193 | 114 | 5 | 5 | 191 | 77 | 252 | 1.52e-17 | 84.3 |
Msa0184290 | MtrunA17_Chr4g0017401 | 42.647 | 68 | 38 | 1 | 5 | 71 | 17 | 84 | 2.95e-17 | 82.0 |
Msa0184290 | MtrunA17_Chr8g0360551 | 26.816 | 179 | 119 | 3 | 5 | 182 | 74 | 241 | 4.72e-17 | 83.6 |
Msa0184290 | MtrunA17_Chr7g0219021 | 46.988 | 83 | 42 | 1 | 1 | 81 | 37 | 119 | 5.23e-17 | 80.9 |
Msa0184290 | MtrunA17_Chr1g0181111 | 30.159 | 189 | 119 | 5 | 5 | 181 | 85 | 272 | 8.07e-17 | 80.9 |
Msa0184290 | MtrunA17_Chr7g0276531 | 47.059 | 68 | 35 | 1 | 5 | 71 | 19 | 86 | 2.56e-16 | 79.0 |
Msa0184290 | MtrunA17_Chr5g0440831 | 23.784 | 185 | 131 | 3 | 1 | 182 | 160 | 337 | 2.72e-15 | 78.6 |
Msa0184290 | MtrunA17_Chr3g0116631 | 30.256 | 195 | 117 | 6 | 4 | 193 | 109 | 289 | 3.30e-15 | 76.3 |
Msa0184290 | MtrunA17_Chr2g0278661 | 41.463 | 82 | 46 | 1 | 2 | 81 | 5 | 86 | 1.50e-14 | 73.6 |
Msa0184290 | MtrunA17_Chr3g0121631 | 42.683 | 82 | 46 | 1 | 1 | 81 | 33 | 114 | 1.65e-14 | 70.9 |
Msa0184290 | MtrunA17_Chr7g0255011 | 22.905 | 179 | 137 | 1 | 5 | 182 | 128 | 306 | 4.05e-14 | 74.7 |
Msa0184290 | MtrunA17_Chr7g0267571 | 27.411 | 197 | 128 | 6 | 2 | 190 | 107 | 296 | 1.01e-13 | 72.4 |
Msa0184290 | MtrunA17_Chr3g0119311 | 38.947 | 95 | 54 | 2 | 5 | 95 | 37 | 131 | 3.00e-13 | 67.0 |
Msa0184290 | MtrunA17_Chr1g0153871 | 30.682 | 176 | 105 | 6 | 6 | 176 | 192 | 355 | 5.24e-13 | 70.9 |
Msa0184290 | MtrunA17_Chr4g0035051 | 36.842 | 76 | 46 | 1 | 5 | 78 | 9 | 84 | 6.31e-13 | 65.5 |
Msa0184290 | MtrunA17_Chr4g0050781 | 36.709 | 79 | 48 | 1 | 5 | 81 | 8 | 86 | 9.35e-13 | 67.4 |
Msa0184290 | MtrunA17_Chr4g0050781 | 36.709 | 79 | 49 | 1 | 107 | 184 | 8 | 86 | 3.29e-12 | 65.9 |
Msa0184290 | MtrunA17_Chr7g0266751 | 41.026 | 78 | 44 | 1 | 5 | 80 | 33 | 110 | 9.99e-13 | 65.5 |
Msa0184290 | MtrunA17_Chr1g0210241 | 39.241 | 79 | 46 | 1 | 5 | 81 | 8 | 86 | 1.25e-12 | 68.6 |
Msa0184290 | MtrunA17_Chr1g0210241 | 36.709 | 79 | 49 | 1 | 107 | 184 | 8 | 86 | 1.93e-12 | 67.8 |
Msa0184290 | MtrunA17_Chr2g0327921 | 39.286 | 84 | 42 | 2 | 107 | 185 | 8 | 87 | 1.47e-12 | 63.5 |
Msa0184290 | MtrunA17_Chr4g0061451 | 41.772 | 79 | 44 | 1 | 5 | 81 | 43 | 121 | 1.92e-12 | 67.8 |
Msa0184290 | MtrunA17_Chr4g0035031 | 38.158 | 76 | 45 | 1 | 5 | 78 | 9 | 84 | 3.45e-12 | 65.5 |
Msa0184290 | MtrunA17_Chr3g0110211 | 28.000 | 225 | 131 | 7 | 7 | 226 | 28 | 226 | 5.55e-12 | 67.4 |
Msa0184290 | MtrunA17_Chr6g0465631 | 27.389 | 157 | 108 | 4 | 11 | 164 | 113 | 266 | 6.22e-12 | 67.8 |
Msa0184290 | MtrunA17_Chr6g0466451 | 27.389 | 157 | 108 | 4 | 11 | 164 | 113 | 266 | 6.27e-12 | 67.8 |
Msa0184290 | MtrunA17_Chr2g0328791 | 27.568 | 185 | 115 | 5 | 6 | 184 | 17 | 188 | 7.34e-12 | 67.4 |
Msa0184290 | MtrunA17_Chr4g0074711 | 27.374 | 179 | 109 | 6 | 6 | 176 | 169 | 334 | 1.34e-11 | 66.6 |
Msa0184290 | MtrunA17_Chr4g0035001 | 36.842 | 76 | 46 | 1 | 5 | 78 | 7 | 82 | 1.53e-11 | 62.8 |
Msa0184290 | MtrunA17_Chr7g0268551 | 23.345 | 287 | 165 | 8 | 5 | 265 | 17 | 274 | 1.56e-11 | 66.2 |
Msa0184290 | MtrunA17_Chr7g0219031 | 49.057 | 53 | 27 | 0 | 1 | 53 | 37 | 89 | 1.58e-11 | 61.6 |
Msa0184290 | MtrunA17_Chr1g0177101 | 27.568 | 185 | 118 | 5 | 5 | 182 | 109 | 284 | 1.59e-11 | 65.5 |
Msa0184290 | MtrunA17_Chr1g0201151 | 26.816 | 179 | 112 | 7 | 6 | 176 | 211 | 378 | 3.01e-11 | 65.9 |
Msa0184290 | MtrunA17_Chr4g0044541 | 25.281 | 178 | 110 | 4 | 6 | 181 | 36 | 192 | 7.12e-11 | 64.7 |
Msa0184290 | MtrunA17_Chr4g0070231 | 29.885 | 174 | 93 | 6 | 6 | 157 | 133 | 299 | 8.91e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0184290 | AT3G07810.1 | 53.015 | 481 | 210 | 10 | 2 | 468 | 4 | 482 | 5.05e-142 | 418 |
Msa0184290 | AT3G07810.2 | 53.015 | 481 | 210 | 10 | 2 | 468 | 4 | 482 | 6.34e-142 | 418 |
Msa0184290 | AT5G47620.1 | 59.831 | 356 | 131 | 7 | 1 | 354 | 3 | 348 | 8.68e-134 | 395 |
Msa0184290 | AT5G47620.2 | 59.831 | 356 | 131 | 7 | 1 | 354 | 3 | 348 | 8.68e-134 | 395 |
Msa0184290 | AT5G47620.5 | 59.831 | 356 | 131 | 7 | 1 | 354 | 3 | 348 | 8.68e-134 | 395 |
Msa0184290 | AT5G47620.4 | 56.349 | 378 | 131 | 8 | 1 | 354 | 3 | 370 | 9.44e-129 | 383 |
Msa0184290 | AT4G26650.1 | 48.148 | 486 | 165 | 19 | 2 | 461 | 13 | 437 | 4.50e-117 | 353 |
Msa0184290 | AT4G26650.2 | 48.148 | 486 | 165 | 19 | 2 | 461 | 10 | 434 | 4.51e-117 | 353 |
Msa0184290 | AT5G55550.5 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 1.41e-109 | 333 |
Msa0184290 | AT5G55550.4 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 1.41e-109 | 333 |
Msa0184290 | AT5G55550.9 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 1.41e-109 | 333 |
Msa0184290 | AT5G55550.7 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 1.41e-109 | 333 |
Msa0184290 | AT5G55550.1 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 1.41e-109 | 333 |
Msa0184290 | AT5G55550.2 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 2.14e-109 | 333 |
Msa0184290 | AT5G55550.3 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 2.14e-109 | 333 |
Msa0184290 | AT5G55550.6 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 2.14e-109 | 333 |
Msa0184290 | AT5G55550.11 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 2.14e-109 | 333 |
Msa0184290 | AT5G55550.8 | 51.194 | 377 | 108 | 13 | 2 | 317 | 4 | 365 | 1.57e-100 | 312 |
Msa0184290 | AT5G55550.10 | 51.194 | 377 | 108 | 13 | 2 | 317 | 4 | 365 | 1.97e-100 | 312 |
Msa0184290 | AT5G47620.3 | 55.634 | 284 | 114 | 7 | 73 | 354 | 15 | 288 | 1.80e-87 | 274 |
Msa0184290 | AT5G47620.3 | 36.709 | 79 | 49 | 1 | 5 | 82 | 47 | 125 | 8.34e-13 | 70.5 |
Msa0184290 | AT4G14300.1 | 56.614 | 189 | 80 | 1 | 2 | 188 | 4 | 192 | 2.68e-74 | 241 |
Msa0184290 | AT4G14300.2 | 56.614 | 189 | 80 | 1 | 2 | 188 | 4 | 192 | 2.68e-74 | 241 |
Msa0184290 | AT2G33410.1 | 55.026 | 189 | 83 | 1 | 2 | 188 | 4 | 192 | 1.81e-71 | 233 |
Msa0184290 | AT1G58470.2 | 48.000 | 200 | 84 | 3 | 2 | 185 | 4 | 199 | 2.76e-52 | 182 |
Msa0184290 | AT1G58470.1 | 48.000 | 200 | 84 | 3 | 2 | 185 | 4 | 199 | 2.76e-52 | 182 |
Msa0184290 | AT1G17640.2 | 48.087 | 183 | 83 | 2 | 3 | 184 | 65 | 236 | 1.38e-51 | 180 |
Msa0184290 | AT1G17640.1 | 48.087 | 183 | 83 | 2 | 3 | 184 | 65 | 236 | 1.38e-51 | 180 |
Msa0184290 | AT1G17640.3 | 48.087 | 183 | 83 | 2 | 3 | 184 | 65 | 236 | 1.38e-51 | 180 |
Msa0184290 | AT3G13224.2 | 41.121 | 214 | 105 | 4 | 3 | 214 | 18 | 212 | 4.25e-47 | 167 |
Msa0184290 | AT3G13224.3 | 40.566 | 212 | 105 | 4 | 5 | 214 | 11 | 203 | 3.68e-45 | 162 |
Msa0184290 | AT3G13224.3 | 48.750 | 80 | 40 | 1 | 105 | 184 | 9 | 87 | 6.70e-18 | 85.5 |
Msa0184290 | AT3G13224.1 | 44.512 | 164 | 79 | 1 | 3 | 166 | 18 | 169 | 1.85e-44 | 157 |
Msa0184290 | AT3G13224.1 | 50.000 | 78 | 38 | 1 | 107 | 184 | 20 | 96 | 1.13e-17 | 82.8 |
Msa0184290 | AT5G40490.1 | 43.407 | 182 | 88 | 2 | 4 | 184 | 42 | 209 | 1.07e-43 | 160 |
Msa0184290 | AT5G40490.2 | 44.512 | 164 | 76 | 2 | 22 | 184 | 43 | 192 | 4.43e-39 | 147 |
Msa0184290 | AT5G40490.2 | 33.333 | 102 | 67 | 1 | 83 | 184 | 2 | 102 | 1.24e-12 | 70.1 |
Msa0184290 | AT5G40490.2 | 36.905 | 84 | 51 | 1 | 5 | 86 | 114 | 197 | 1.75e-11 | 66.6 |
Msa0184290 | AT4G36960.1 | 38.830 | 188 | 98 | 4 | 5 | 190 | 4 | 176 | 3.49e-37 | 141 |
Msa0184290 | AT4G36960.2 | 38.830 | 188 | 98 | 4 | 5 | 190 | 4 | 176 | 3.49e-37 | 141 |
Msa0184290 | AT1G33470.2 | 34.839 | 155 | 83 | 5 | 5 | 157 | 8 | 146 | 9.82e-21 | 92.0 |
Msa0184290 | AT1G33470.2 | 35.106 | 94 | 58 | 1 | 107 | 197 | 8 | 101 | 7.91e-11 | 62.8 |
Msa0184290 | AT1G33470.3 | 34.839 | 155 | 83 | 5 | 5 | 157 | 8 | 146 | 1.10e-20 | 91.7 |
Msa0184290 | AT1G33470.3 | 35.106 | 94 | 58 | 1 | 107 | 197 | 8 | 101 | 8.67e-11 | 62.8 |
Msa0184290 | AT1G33470.1 | 34.839 | 155 | 83 | 5 | 5 | 157 | 8 | 146 | 1.17e-20 | 91.7 |
Msa0184290 | AT1G33470.1 | 35.106 | 94 | 58 | 1 | 107 | 197 | 8 | 101 | 8.79e-11 | 62.8 |
Msa0184290 | AT1G76460.1 | 42.667 | 75 | 42 | 1 | 5 | 78 | 25 | 99 | 7.16e-18 | 84.3 |
Msa0184290 | AT1G20880.2 | 42.667 | 75 | 42 | 1 | 5 | 78 | 25 | 99 | 1.01e-17 | 84.0 |
Msa0184290 | AT1G20880.3 | 42.667 | 75 | 42 | 1 | 5 | 78 | 25 | 99 | 1.01e-17 | 84.0 |
Msa0184290 | AT1G20880.1 | 42.667 | 75 | 42 | 1 | 5 | 78 | 25 | 99 | 1.01e-17 | 84.0 |
Msa0184290 | AT1G22330.1 | 45.333 | 75 | 40 | 1 | 5 | 78 | 18 | 92 | 1.66e-17 | 83.6 |
Msa0184290 | AT2G46780.1 | 39.091 | 110 | 54 | 3 | 5 | 102 | 23 | 131 | 2.85e-17 | 83.6 |
Msa0184290 | AT2G46780.2 | 39.091 | 110 | 54 | 3 | 5 | 102 | 23 | 131 | 2.85e-17 | 83.6 |
Msa0184290 | AT1G78260.1 | 47.059 | 68 | 35 | 1 | 5 | 71 | 18 | 85 | 3.25e-17 | 82.4 |
Msa0184290 | AT1G78260.2 | 44.000 | 75 | 41 | 1 | 5 | 78 | 18 | 92 | 7.84e-17 | 81.3 |
Msa0184290 | AT4G24770.1 | 29.592 | 196 | 119 | 5 | 2 | 193 | 148 | 328 | 1.20e-16 | 81.6 |
Msa0184290 | AT4G24770.2 | 29.592 | 196 | 119 | 5 | 2 | 193 | 148 | 328 | 1.20e-16 | 81.6 |
Msa0184290 | AT2G37220.1 | 29.319 | 191 | 119 | 5 | 5 | 181 | 92 | 280 | 1.59e-16 | 80.5 |
Msa0184290 | AT3G52380.1 | 33.514 | 185 | 102 | 7 | 2 | 177 | 114 | 286 | 1.59e-16 | 81.3 |
Msa0184290 | AT3G15010.1 | 29.050 | 179 | 115 | 3 | 5 | 182 | 76 | 243 | 3.30e-16 | 81.3 |
Msa0184290 | AT3G15010.2 | 29.050 | 179 | 115 | 3 | 5 | 182 | 76 | 243 | 3.30e-16 | 81.3 |
Msa0184290 | AT2G41060.1 | 26.437 | 174 | 108 | 3 | 5 | 168 | 129 | 292 | 8.81e-16 | 80.1 |
Msa0184290 | AT2G41060.3 | 26.437 | 174 | 108 | 3 | 5 | 168 | 129 | 292 | 8.81e-16 | 80.1 |
Msa0184290 | AT2G41060.2 | 26.437 | 174 | 108 | 3 | 5 | 168 | 129 | 292 | 8.81e-16 | 80.1 |
Msa0184290 | AT3G23830.2 | 43.038 | 79 | 43 | 1 | 5 | 81 | 36 | 114 | 1.05e-15 | 74.3 |
Msa0184290 | AT3G23830.2 | 34.884 | 86 | 55 | 1 | 107 | 191 | 36 | 121 | 7.95e-12 | 63.2 |
Msa0184290 | AT3G23830.1 | 43.038 | 79 | 43 | 1 | 5 | 81 | 36 | 114 | 1.05e-15 | 74.3 |
Msa0184290 | AT3G23830.1 | 34.884 | 86 | 55 | 1 | 107 | 191 | 36 | 121 | 7.95e-12 | 63.2 |
Msa0184290 | AT4G16280.4 | 29.592 | 196 | 114 | 6 | 5 | 192 | 46 | 225 | 1.74e-15 | 80.1 |
Msa0184290 | AT4G16280.3 | 29.592 | 196 | 114 | 6 | 5 | 192 | 121 | 300 | 1.80e-15 | 79.7 |
Msa0184290 | AT4G16280.2 | 29.592 | 196 | 114 | 6 | 5 | 192 | 121 | 300 | 1.97e-15 | 79.7 |
Msa0184290 | AT4G13850.4 | 46.835 | 79 | 40 | 1 | 5 | 81 | 36 | 114 | 2.81e-15 | 73.2 |
Msa0184290 | AT4G13850.3 | 46.835 | 79 | 40 | 1 | 5 | 81 | 36 | 114 | 4.41e-15 | 72.8 |
Msa0184290 | AT4G13850.2 | 46.835 | 79 | 40 | 1 | 5 | 81 | 36 | 114 | 5.48e-15 | 72.8 |
Msa0184290 | AT4G13850.1 | 46.835 | 79 | 40 | 1 | 5 | 81 | 36 | 114 | 6.16e-15 | 72.8 |
Msa0184290 | AT4G39260.3 | 39.241 | 79 | 46 | 1 | 5 | 81 | 7 | 85 | 9.36e-15 | 70.5 |
Msa0184290 | AT4G39260.3 | 35.165 | 91 | 52 | 3 | 107 | 197 | 7 | 90 | 4.12e-11 | 60.1 |
Msa0184290 | AT1G22910.2 | 36.000 | 75 | 47 | 1 | 5 | 78 | 14 | 88 | 1.68e-14 | 73.6 |
Msa0184290 | AT1G22910.1 | 36.000 | 75 | 47 | 1 | 5 | 78 | 14 | 88 | 1.69e-14 | 73.9 |
Msa0184290 | AT3G56860.9 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0184290 | AT3G56860.11 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0184290 | AT3G56860.8 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0184290 | AT3G56860.5 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0184290 | AT3G56860.7 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0184290 | AT3G56860.2 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0184290 | AT3G56860.6 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0184290 | AT3G56860.10 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0184290 | AT3G56860.3 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0184290 | AT3G56860.1 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0184290 | AT3G56860.4 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0184290 | AT2G36660.1 | 28.824 | 170 | 108 | 6 | 6 | 169 | 203 | 365 | 4.35e-14 | 75.5 |
Msa0184290 | AT4G39260.2 | 39.474 | 76 | 44 | 1 | 5 | 78 | 7 | 82 | 5.69e-14 | 69.3 |
Msa0184290 | AT1G22910.3 | 36.000 | 75 | 47 | 1 | 5 | 78 | 14 | 88 | 8.03e-14 | 73.2 |
Msa0184290 | AT5G11412.1 | 42.667 | 75 | 42 | 1 | 5 | 78 | 53 | 127 | 9.58e-14 | 70.1 |
Msa0184290 | AT3G54770.3 | 38.667 | 75 | 45 | 1 | 5 | 78 | 18 | 92 | 1.37e-13 | 71.2 |
Msa0184290 | AT4G39260.1 | 39.474 | 76 | 44 | 1 | 5 | 78 | 7 | 82 | 1.56e-13 | 69.3 |
Msa0184290 | AT3G52150.2 | 27.979 | 193 | 120 | 5 | 1 | 181 | 68 | 253 | 1.89e-13 | 70.9 |
Msa0184290 | AT3G52150.1 | 27.979 | 193 | 120 | 5 | 1 | 181 | 68 | 253 | 1.89e-13 | 70.9 |
Msa0184290 | AT3G54770.1 | 38.667 | 75 | 45 | 1 | 5 | 78 | 18 | 92 | 2.17e-13 | 70.9 |
Msa0184290 | AT4G34110.1 | 28.249 | 177 | 117 | 5 | 6 | 179 | 217 | 386 | 2.65e-13 | 72.8 |
Msa0184290 | AT1G60650.2 | 44.304 | 79 | 43 | 1 | 107 | 184 | 13 | 91 | 3.13e-13 | 70.9 |
Msa0184290 | AT1G60650.1 | 44.304 | 79 | 43 | 1 | 107 | 184 | 13 | 91 | 3.13e-13 | 70.9 |
Msa0184290 | AT5G61030.2 | 40.789 | 76 | 42 | 1 | 1 | 76 | 37 | 109 | 4.33e-13 | 70.5 |
Msa0184290 | AT5G61030.1 | 40.789 | 76 | 42 | 1 | 1 | 76 | 37 | 109 | 4.33e-13 | 70.5 |
Msa0184290 | AT5G50250.1 | 27.869 | 183 | 119 | 4 | 2 | 181 | 111 | 283 | 5.07e-13 | 70.1 |
Msa0184290 | AT5G50250.1 | 31.788 | 151 | 98 | 3 | 93 | 241 | 100 | 247 | 6.80e-11 | 63.9 |
Msa0184290 | AT2G23350.1 | 28.977 | 176 | 111 | 5 | 6 | 176 | 227 | 393 | 6.09e-13 | 72.0 |
Msa0184290 | AT4G39260.4 | 43.333 | 60 | 34 | 0 | 5 | 64 | 7 | 66 | 6.95e-13 | 65.5 |
Msa0184290 | AT5G06210.1 | 46.479 | 71 | 36 | 1 | 5 | 73 | 35 | 105 | 7.11e-13 | 66.6 |
Msa0184290 | AT4G00830.2 | 26.596 | 188 | 105 | 7 | 5 | 184 | 117 | 279 | 1.18e-12 | 70.5 |
Msa0184290 | AT4G00830.1 | 26.596 | 188 | 105 | 7 | 5 | 184 | 117 | 279 | 1.18e-12 | 70.5 |
Msa0184290 | AT4G00830.6 | 26.596 | 188 | 105 | 7 | 5 | 184 | 117 | 279 | 1.18e-12 | 70.5 |
Msa0184290 | AT4G27000.1 | 29.268 | 164 | 103 | 4 | 6 | 164 | 175 | 330 | 1.21e-12 | 70.1 |
Msa0184290 | AT4G13860.1 | 41.892 | 74 | 41 | 1 | 5 | 76 | 4 | 77 | 1.55e-12 | 63.9 |
Msa0184290 | AT4G00830.4 | 27.957 | 186 | 105 | 7 | 5 | 184 | 117 | 279 | 1.70e-12 | 70.1 |
Msa0184290 | AT1G60000.1 | 25.967 | 181 | 117 | 4 | 5 | 181 | 86 | 253 | 1.72e-12 | 68.2 |
Msa0184290 | AT3G26420.1 | 36.170 | 94 | 56 | 2 | 5 | 96 | 8 | 99 | 1.86e-12 | 67.8 |
Msa0184290 | AT5G59865.1 | 32.911 | 79 | 51 | 1 | 5 | 81 | 27 | 105 | 2.28e-12 | 64.3 |
Msa0184290 | AT2G21660.2 | 38.158 | 76 | 45 | 1 | 5 | 78 | 9 | 84 | 2.91e-12 | 65.1 |
Msa0184290 | AT2G21660.1 | 38.158 | 76 | 45 | 1 | 5 | 78 | 9 | 84 | 4.03e-12 | 65.5 |
Msa0184290 | AT5G04280.1 | 37.975 | 79 | 48 | 1 | 107 | 184 | 8 | 86 | 4.32e-12 | 67.8 |
Msa0184290 | AT5G04280.1 | 35.789 | 95 | 54 | 2 | 5 | 97 | 8 | 97 | 5.68e-12 | 67.4 |
Msa0184290 | AT1G71770.1 | 29.050 | 179 | 107 | 9 | 6 | 176 | 241 | 407 | 6.49e-12 | 68.6 |
Msa0184290 | AT1G71770.2 | 29.050 | 179 | 107 | 9 | 6 | 176 | 241 | 407 | 6.49e-12 | 68.6 |
Msa0184290 | AT3G16380.1 | 26.064 | 188 | 131 | 6 | 2 | 185 | 200 | 383 | 1.13e-11 | 67.8 |
Msa0184290 | AT3G16380.1 | 25.137 | 183 | 119 | 5 | 6 | 185 | 114 | 281 | 3.52e-11 | 66.2 |
Msa0184290 | AT4G00830.3 | 27.419 | 186 | 98 | 6 | 5 | 184 | 117 | 271 | 1.14e-11 | 67.4 |
Msa0184290 | AT4G00830.5 | 27.419 | 186 | 98 | 6 | 5 | 184 | 117 | 271 | 1.14e-11 | 67.4 |
Msa0184290 | AT5G53720.1 | 41.333 | 75 | 43 | 1 | 5 | 78 | 10 | 84 | 1.50e-11 | 61.6 |
Msa0184290 | AT5G54900.1 | 29.586 | 169 | 97 | 7 | 6 | 164 | 156 | 312 | 2.25e-11 | 66.2 |
Msa0184290 | AT5G54900.1 | 25.128 | 195 | 130 | 6 | 2 | 195 | 58 | 237 | 3.95e-11 | 65.5 |
Msa0184290 | AT1G18630.1 | 38.667 | 75 | 44 | 1 | 1 | 73 | 33 | 107 | 2.28e-11 | 62.4 |
Msa0184290 | AT3G06970.1 | 40.000 | 75 | 44 | 1 | 5 | 78 | 13 | 87 | 3.05e-11 | 65.1 |
Msa0184290 | AT1G74230.1 | 40.260 | 77 | 42 | 1 | 1 | 77 | 31 | 103 | 3.61e-11 | 64.7 |
Msa0184290 | AT1G01080.1 | 26.064 | 188 | 129 | 4 | 3 | 184 | 107 | 290 | 5.17e-11 | 64.3 |
Msa0184290 | AT1G49760.1 | 27.374 | 179 | 116 | 5 | 6 | 179 | 226 | 395 | 6.74e-11 | 65.5 |
Msa0184290 | AT1G49760.2 | 27.374 | 179 | 116 | 5 | 6 | 179 | 226 | 395 | 6.74e-11 | 65.5 |
Find 139 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTCTGATTTGTTGAATTTA+TGG | 0.107746 | 1_4:-73634700 | None:intergenic |
TACAAGGGATTTACTATATA+AGG | 0.163431 | 1_4:+73635990 | Msa0184290:three_prime_UTR |
ATTGGTTCATTTGGAAATAT+TGG | 0.185824 | 1_4:+73634807 | Msa0184290:CDS |
TCACGAACTTAATGGTAAAA+TGG | 0.231963 | 1_4:+73634287 | Msa0184290:CDS |
GTAAAAGCAGTCTTAATTAT+AGG | 0.247091 | 1_4:+73634892 | Msa0184290:CDS |
TTGAGTTGAGTGTGAATTAT+AGG | 0.247263 | 1_4:+73636014 | Msa0184290:three_prime_UTR |
GCTTTCTCAAATGGCAATTA+TGG | 0.252580 | 1_4:+73634996 | Msa0184290:CDS |
CAAGTATGGTCTTGATAAAA+TGG | 0.260964 | 1_4:-73635050 | None:intergenic |
ACGGGACGTGCTCGTGGTTT+TGG | 0.261674 | 1_4:+73633249 | Msa0184290:CDS |
AATTCAAGTATTGGTTCATT+TGG | 0.263527 | 1_4:+73634798 | Msa0184290:CDS |
GCAAGCTCTGATGCTTTCTT+AGG | 0.264487 | 1_4:+73634762 | Msa0184290:CDS |
TTCAAACTGTTATTCCTCTT+TGG | 0.270502 | 1_4:+73636187 | Msa0184290:three_prime_UTR |
TATTCATTGGAGGGATTTCC+TGG | 0.271367 | 1_4:+73633145 | Msa0184290:CDS |
ACTCAACGTCCTAGAGGTTT+TGG | 0.280151 | 1_4:+73634210 | Msa0184290:CDS |
GATTCTGGTCCTCTTAGTTT+TGG | 0.283274 | 1_4:+73635098 | Msa0184290:CDS |
GGGTCAAAAGCGGTAGGTTA+TGG | 0.288227 | 1_4:+73634933 | Msa0184290:CDS |
CTTCTGGGTTTGTCTTCATT+TGG | 0.305701 | 1_4:+73632571 | Msa0184290:five_prime_UTR |
ATAAATATGTATATATATAA+TGG | 0.307969 | 1_4:-73632434 | None:intergenic |
ACTTCAGAATTAGAGGATTC+TGG | 0.318320 | 1_4:+73635083 | Msa0184290:CDS |
GTAAAATGGTTGAGGTTAAG+AGG | 0.336119 | 1_4:+73634301 | Msa0184290:CDS |
AAGAATTACTTTGATCAATT+CGG | 0.342885 | 1_4:+73634150 | Msa0184290:CDS |
GCTCTAGTGGTGGCCACATT+GGG | 0.352710 | 1_4:+73635156 | Msa0184290:CDS |
GGACTTGGAGATAAATCCTT+TGG | 0.354791 | 1_4:-73634330 | None:intergenic |
ATCAACAACTTCAGAATTAG+AGG | 0.355605 | 1_4:+73635076 | Msa0184290:CDS |
TGTTGCCGAACGCGTTGTTA+TGG | 0.356640 | 1_4:+73633296 | Msa0184290:CDS |
ACTAATCAAGCTGGAACTAT+TGG | 0.362493 | 1_4:+73634858 | Msa0184290:CDS |
TATCATTGAAATGTTCATCT+AGG | 0.374382 | 1_4:+73636315 | Msa0184290:three_prime_UTR |
CTTCACTTCTAACTTTATCA+TGG | 0.381164 | 1_4:+73634584 | Msa0184290:CDS |
AAGAAAGCATCAGAGCTTGC+AGG | 0.383788 | 1_4:-73634759 | None:intergenic |
ACAAGGGATTTACTATATAA+GGG | 0.384052 | 1_4:+73635991 | Msa0184290:three_prime_UTR |
TCGTTAGAGCCAATTGGATT+TGG | 0.391620 | 1_4:+73635934 | Msa0184290:CDS |
AAAATTTCGTTAGAGCCAAT+TGG | 0.396835 | 1_4:+73635928 | Msa0184290:CDS |
GGAACTATTGGCTCTGGTTA+TGG | 0.399080 | 1_4:+73634870 | Msa0184290:CDS |
GGAAGTGAAAATTCAAGTAT+TGG | 0.406692 | 1_4:+73634789 | Msa0184290:CDS |
GACTTGGAGATAAATCCTTT+GGG | 0.412330 | 1_4:-73634329 | None:intergenic |
TTGGAAATATTGGATCGCTT+TGG | 0.415441 | 1_4:+73634817 | Msa0184290:CDS |
AGCAGTCTTAATTATAGGCT+TGG | 0.418041 | 1_4:+73634897 | Msa0184290:CDS |
GTGAAAGTGCAGGGTGGAAA+TGG | 0.418687 | 1_4:+73633110 | Msa0184290:intron |
TCATCGTCCGCTTTCTCAAA+TGG | 0.418816 | 1_4:+73634987 | Msa0184290:CDS |
CCACCTAGCTGACCTCTACT+TGG | 0.422780 | 1_4:-73634351 | None:intergenic |
AATCAGAGTTTGTGGGGTAA+TGG | 0.426835 | 1_4:+73634714 | Msa0184290:CDS |
TAAGTCCATGTCCTCCAATC+AGG | 0.431180 | 1_4:-73634443 | None:intergenic |
AGCTCTAGTGGTGGCCACAT+TGG | 0.433128 | 1_4:+73635155 | Msa0184290:CDS |
ACCATGTTGCTAGTCTTGGC+TGG | 0.436916 | 1_4:+73636224 | Msa0184290:three_prime_UTR |
TTGGACCATGTTGCTAGTCT+TGG | 0.444588 | 1_4:+73636220 | Msa0184290:three_prime_UTR |
AATAGTTCCAGCTTGATTAG+TGG | 0.446759 | 1_4:-73634856 | None:intergenic |
ATTCAACAAATCAGAGTTTG+TGG | 0.447295 | 1_4:+73634706 | Msa0184290:CDS |
TCTGATGCTTTCTTAGGTTA+CGG | 0.449952 | 1_4:+73634768 | Msa0184290:CDS |
CTGCTCGGACTTGCACTGTA+TGG | 0.456091 | 1_4:-73634624 | None:intergenic |
TTCACTTCTAACTTTATCAT+GGG | 0.456159 | 1_4:+73634585 | Msa0184290:CDS |
TCAACACTGCCAAATCCAAT+TGG | 0.469168 | 1_4:-73635943 | None:intergenic |
GGATATAATCCAAGCCTGAT+TGG | 0.471574 | 1_4:+73634429 | Msa0184290:CDS |
AAGTTGTTGATCTCCAAGTA+TGG | 0.472206 | 1_4:-73635064 | None:intergenic |
TTCAGTCCTAGTTATGGGAC+AGG | 0.482898 | 1_4:+73634519 | Msa0184290:CDS |
GACCCGGGGAAGCTATTCAT+TGG | 0.483289 | 1_4:+73633132 | Msa0184290:CDS |
TTGAGTCCTGTCCCATAACT+AGG | 0.486555 | 1_4:-73634525 | None:intergenic |
TACTTCAGGAATTGCTGCTT+AGG | 0.486807 | 1_4:+73635809 | Msa0184290:intron |
CAGCTAGGTGGATTTAGTTA+CGG | 0.489503 | 1_4:+73634363 | Msa0184290:CDS |
CCTCCAATGAATAGCTTCCC+CGG | 0.490387 | 1_4:-73633135 | None:intergenic |
ATAAAATGGCCCAGCTTCAA+AGG | 0.491559 | 1_4:-73635036 | None:intergenic |
CAAGCTGGAACTATTGGCTC+TGG | 0.492504 | 1_4:+73634864 | Msa0184290:CDS |
CTTGTAATCAAGTTATATGA+TGG | 0.496916 | 1_4:+73636061 | Msa0184290:three_prime_UTR |
TCGGTCTTCATTTGTATCCC+AGG | 0.498427 | 1_4:-73633163 | None:intergenic |
CAAATACACAGAGACTTACA+AGG | 0.503790 | 1_4:+73635974 | Msa0184290:three_prime_UTR |
CCTCTTTGGACAAGTAGAGT+TGG | 0.505174 | 1_4:+73636201 | Msa0184290:three_prime_UTR |
CCACTACGGCCAACATTAGC+AGG | 0.505272 | 1_4:-73634486 | None:intergenic |
CCTGCTAATGTTGGCCGTAG+TGG | 0.506110 | 1_4:+73634486 | Msa0184290:CDS |
TGCAGGGTGGAAATGGACCC+GGG | 0.506477 | 1_4:+73633117 | Msa0184290:intron |
TGTTGCTAGTCTTGGCTGGT+TGG | 0.510056 | 1_4:+73636228 | Msa0184290:three_prime_UTR |
ACTTAATGGTAAAATGGTTG+AGG | 0.511412 | 1_4:+73634293 | Msa0184290:CDS |
CCATGTCCTCCAATCAGGCT+TGG | 0.512206 | 1_4:-73634438 | None:intergenic |
CCAAGCCTGATTGGAGGACA+TGG | 0.513321 | 1_4:+73634438 | Msa0184290:CDS |
TTTGCGCATTAAATCTGAAA+CGG | 0.516756 | 1_4:-73635132 | None:intergenic |
ATTTATCTTCTTTCAATCAA+CGG | 0.528092 | 1_4:+73632451 | Msa0184290:five_prime_UTR |
GAAGAAAGAGAGAGGGCGAA+AGG | 0.528675 | 1_4:-73632508 | None:intergenic |
ATAATGAAGGATCGGACCAC+GGG | 0.531988 | 1_4:+73633231 | Msa0184290:CDS |
TTCAACAAATCAGAGTTTGT+GGG | 0.532385 | 1_4:+73634707 | Msa0184290:CDS |
AACACATTCTGATCATCTCT+AGG | 0.536849 | 1_4:-73634021 | None:intergenic |
TCAGGAATTGCTGCTTAGGA+AGG | 0.547622 | 1_4:+73635813 | Msa0184290:intron |
AGAAGCAACAGCAGCAGTCA+TGG | 0.547797 | 1_4:+73634048 | Msa0184290:CDS |
TACGGTACTATGAGTAGAGT+TGG | 0.549591 | 1_4:+73634381 | Msa0184290:CDS |
TATGCTGCTGGTTCAAATGT+TGG | 0.552503 | 1_4:+73634666 | Msa0184290:CDS |
GTGATGAATCCAAAACCTCT+AGG | 0.559445 | 1_4:-73634219 | None:intergenic |
AGCTGACCTCTACTTGGACT+TGG | 0.561555 | 1_4:-73634345 | None:intergenic |
GTTTCGAAGGTGAATGAATG+TGG | 0.562363 | 1_4:+73635862 | Msa0184290:CDS |
TTGTTAGAGATAAAATAAAG+AGG | 0.563764 | 1_4:+73632484 | Msa0184290:five_prime_UTR |
CGGGGAAGCTATTCATTGGA+GGG | 0.568890 | 1_4:+73633136 | Msa0184290:CDS |
TAAAATGGTTGAGGTTAAGA+GGG | 0.571339 | 1_4:+73634302 | Msa0184290:CDS |
TCTGAAAATACTGTCTGAGT+CGG | 0.573282 | 1_4:-73633182 | None:intergenic |
CTCCAATGAATAGCTTCCCC+GGG | 0.574486 | 1_4:-73633134 | None:intergenic |
ACAACGCGTTCGGCAACAGA+AGG | 0.576203 | 1_4:-73633291 | None:intergenic |
GTTGGTACCACTAATCAAGC+TGG | 0.576360 | 1_4:+73634849 | Msa0184290:CDS |
AGTCCAAGTAGAGGTCAGCT+AGG | 0.576395 | 1_4:+73634348 | Msa0184290:CDS |
AAAAGAAAATAAAAGGGAGA+AGG | 0.578745 | 1_4:-73636142 | None:intergenic |
TGTTAGAGATAAAATAAAGA+GGG | 0.579141 | 1_4:+73632485 | Msa0184290:five_prime_UTR |
GTGCAGGGTGGAAATGGACC+CGG | 0.583174 | 1_4:+73633116 | Msa0184290:intron |
ATAATTGCCATTTGAGAAAG+CGG | 0.584456 | 1_4:-73634994 | None:intergenic |
AATGCCATGGCATATGCTGC+TGG | 0.585801 | 1_4:+73634654 | Msa0184290:CDS |
GTGCGTATAGGAGTAGGAGC+AGG | 0.586075 | 1_4:-73634075 | None:intergenic |
ATTCATTGGAGGGATTTCCT+GGG | 0.590560 | 1_4:+73633146 | Msa0184290:CDS |
ACACATTCTGATCATCTCTA+GGG | 0.591583 | 1_4:-73634020 | None:intergenic |
GATGCTAGCTTGTGTTTCGA+AGG | 0.591604 | 1_4:+73635849 | Msa0184290:CDS |
GGTTAAGAGGGCTGTCCCAA+AGG | 0.591792 | 1_4:+73634314 | Msa0184290:CDS |
ATGGCATTATTGTATCTGCT+CGG | 0.593063 | 1_4:-73634639 | None:intergenic |
CCGGGGAAGCTATTCATTGG+AGG | 0.593790 | 1_4:+73633135 | Msa0184290:CDS |
GGACATGGACTTAGATTAGA+CGG | 0.596148 | 1_4:+73634453 | Msa0184290:CDS |
AGATTGAGTCCTGCTAATGT+TGG | 0.596495 | 1_4:+73634477 | Msa0184290:CDS |
ATTCATCACATATGATTCTG+AGG | 0.596540 | 1_4:+73634233 | Msa0184290:CDS |
CGGACCACGGGACGTGCTCG+TGG | 0.598613 | 1_4:+73633243 | Msa0184290:CDS |
TCGCTTTGGAGTACCTCTGT+TGG | 0.598671 | 1_4:+73634831 | Msa0184290:CDS |
TATAATCCAAGCCTGATTGG+AGG | 0.599267 | 1_4:+73634432 | Msa0184290:CDS |
CTCAAATGGCAATTATGGCG+AGG | 0.603967 | 1_4:+73635001 | Msa0184290:CDS |
AAGCTGTGATAATGAAGGAT+CGG | 0.604188 | 1_4:+73633223 | Msa0184290:CDS |
AGCATAAGAAGAAAGAGAGA+GGG | 0.604499 | 1_4:-73632515 | None:intergenic |
TCAACAAATCAGAGTTTGTG+GGG | 0.606068 | 1_4:+73634708 | Msa0184290:CDS |
AGAAAGCATCAGAGCTTGCA+GGG | 0.614536 | 1_4:-73634758 | None:intergenic |
TTGTCTATTAGCAACAGCAT+AGG | 0.615183 | 1_4:-73635180 | None:intergenic |
TTAATGCGCAAAAGCTCTAG+TGG | 0.619120 | 1_4:+73635143 | Msa0184290:CDS |
CCAAGTAGAGGTCAGCTAGG+TGG | 0.624464 | 1_4:+73634351 | Msa0184290:CDS |
AAGCATAAGAAGAAAGAGAG+AGG | 0.633966 | 1_4:-73632516 | None:intergenic |
AAAACCACGAGCACGTCCCG+TGG | 0.635104 | 1_4:-73633247 | None:intergenic |
CCAACTCTACTTGTCCAAAG+AGG | 0.637536 | 1_4:-73636201 | None:intergenic |
CTCTAGTGGTGGCCACATTG+GGG | 0.638379 | 1_4:+73635157 | Msa0184290:CDS |
ACACAAGCTAGCATCATACA+TGG | 0.641732 | 1_4:-73635841 | None:intergenic |
AAAATCACTCTCAGTAACTG+TGG | 0.644212 | 1_4:-73634127 | None:intergenic |
TGAACCAGCAGCATATGCCA+TGG | 0.649924 | 1_4:-73634658 | None:intergenic |
AGTTGAAGCTGTGATAATGA+AGG | 0.651982 | 1_4:+73633218 | Msa0184290:CDS |
GATAATGAAGGATCGGACCA+CGG | 0.652237 | 1_4:+73633230 | Msa0184290:CDS |
CATAACACTCAACGTCCTAG+AGG | 0.655325 | 1_4:+73634204 | Msa0184290:CDS |
TTGATTAGTGGTACCAACAG+AGG | 0.658357 | 1_4:-73634844 | None:intergenic |
TTATCTCCAAGTCCAAGTAG+AGG | 0.662062 | 1_4:+73634339 | Msa0184290:CDS |
ACCAGCCAAGACTAGCAACA+TGG | 0.663647 | 1_4:-73636225 | None:intergenic |
TGAAAAGAGAATATCCACTA+CGG | 0.670066 | 1_4:-73634500 | None:intergenic |
GAGCAGATACAATAATGCCA+TGG | 0.672280 | 1_4:+73634641 | Msa0184290:CDS |
ATGCGCAAAAGCTCTAGTGG+TGG | 0.680889 | 1_4:+73635146 | Msa0184290:CDS |
TGTATGGAGAACTCAATGCA+CGG | 0.691238 | 1_4:-73634608 | None:intergenic |
GCAGGGTGGAAATGGACCCG+GGG | 0.704063 | 1_4:+73633118 | Msa0184290:intron |
AAATACACAGAGACTTACAA+GGG | 0.709229 | 1_4:+73635975 | Msa0184290:three_prime_UTR |
CAACAGCATAGGCCCCAATG+TGG | 0.722323 | 1_4:-73635169 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTCAATTTTGAATTAT+GGG | + | chr1_4:73632639-73632658 | Msa0184290:intron | 10.0% |
!! | GACATAATTATAAATAAAAA+GGG | - | chr1_4:73633933-73633952 | None:intergenic | 10.0% |
!! | AGACATAATTATAAATAAAA+AGG | - | chr1_4:73633934-73633953 | None:intergenic | 10.0% |
!! | AAAAACAAAAGAAAATAAAA+GGG | - | chr1_4:73636151-73636170 | None:intergenic | 10.0% |
!!! | CTTTTTTCAATTTTGAATTA+TGG | + | chr1_4:73632638-73632657 | Msa0184290:intron | 15.0% |
!! | AAAACAAAATTTACTGAATT+GGG | - | chr1_4:73632697-73632716 | None:intergenic | 15.0% |
!! | AAAAACAAAATTTACTGAAT+TGG | - | chr1_4:73632698-73632717 | None:intergenic | 15.0% |
!!! | TTAGATTTTATACTTGATTA+TGG | + | chr1_4:73635280-73635299 | Msa0184290:intron | 15.0% |
!! | GTGAATATAAAAGAAAAATA+TGG | - | chr1_4:73635340-73635359 | None:intergenic | 15.0% |
!! | CAAAAACAAAAGAAAATAAA+AGG | - | chr1_4:73636152-73636171 | None:intergenic | 15.0% |
!! | ATTTATCTTCTTTCAATCAA+CGG | + | chr1_4:73632451-73632470 | Msa0184290:five_prime_UTR | 20.0% |
!! | TTGTTAGAGATAAAATAAAG+AGG | + | chr1_4:73632484-73632503 | Msa0184290:five_prime_UTR | 20.0% |
!! | TGTTAGAGATAAAATAAAGA+GGG | + | chr1_4:73632485-73632504 | Msa0184290:five_prime_UTR | 20.0% |
!! | TTGATGAATTTAATGTTGTT+TGG | + | chr1_4:73632843-73632862 | Msa0184290:intron | 20.0% |
!!! | TTAATGTTGTTTGGATTTAT+AGG | + | chr1_4:73632852-73632871 | Msa0184290:intron | 20.0% |
!!! | TTTATGGATGTGAATTTTTA+TGG | + | chr1_4:73633060-73633079 | Msa0184290:intron | 20.0% |
!! | GAAAAATACACATACAATAT+CGG | + | chr1_4:73633495-73633514 | Msa0184290:intron | 20.0% |
!! | AAGAATTACTTTGATCAATT+CGG | + | chr1_4:73634150-73634169 | Msa0184290:CDS | 20.0% |
!!! | TGAAGTTTTCATTTTCATTA+TGG | - | chr1_4:73634569-73634588 | None:intergenic | 20.0% |
!! | AATAATCAATCATATGGAAA+TGG | - | chr1_4:73635700-73635719 | None:intergenic | 20.0% |
!!! | TTCCATATGATTGATTATTT+TGG | + | chr1_4:73635701-73635720 | Msa0184290:intron | 20.0% |
!! | ATCCAAAATAATCAATCATA+TGG | - | chr1_4:73635706-73635725 | None:intergenic | 20.0% |
!!! | AATTATAGGTTTTCTTTCTT+TGG | + | chr1_4:73636028-73636047 | Msa0184290:three_prime_UTR | 20.0% |
!!! | ATTATAGGTTTTCTTTCTTT+GGG | + | chr1_4:73636029-73636048 | Msa0184290:three_prime_UTR | 20.0% |
!! | TTTCTTCAAATTTTCTCTTC+TGG | + | chr1_4:73632555-73632574 | Msa0184290:five_prime_UTR | 25.0% |
!! | TTCTTCAAATTTTCTCTTCT+GGG | + | chr1_4:73632556-73632575 | Msa0184290:five_prime_UTR | 25.0% |
! | TTGACAAAAGTCATAGAATT+AGG | - | chr1_4:73632609-73632628 | None:intergenic | 25.0% |
!! | TTCAATTTTGAATTATGGGT+TGG | + | chr1_4:73632643-73632662 | Msa0184290:intron | 25.0% |
! | TGTCTGAAAAAACATAGATT+TGG | + | chr1_4:73632753-73632772 | Msa0184290:intron | 25.0% |
!!! | GATTTTGATGTTACTACTTT+TGG | + | chr1_4:73632975-73632994 | Msa0184290:intron | 25.0% |
!!! | GTTAGAAGTAGAATTTTGAT+TGG | + | chr1_4:73633082-73633101 | Msa0184290:intron | 25.0% |
! | GATTTAATATTGCAAGTTCA+TGG | + | chr1_4:73633601-73633620 | Msa0184290:intron | 25.0% |
! | AGAAACACAAATAATGTACT+TGG | - | chr1_4:73633873-73633892 | None:intergenic | 25.0% |
! | AAAGGGAATTATAGAAATCA+AGG | - | chr1_4:73633916-73633935 | None:intergenic | 25.0% |
!!! | AATATCTTTTTTGTGCGTAT+AGG | - | chr1_4:73634090-73634109 | None:intergenic | 25.0% |
!! | ACAAAAAAGATATTTGTTGG+AGG | + | chr1_4:73634096-73634115 | Msa0184290:CDS | 25.0% |
!! | AAAACTTTTCACGAACTTAA+TGG | + | chr1_4:73634279-73634298 | Msa0184290:CDS | 25.0% |
!! | TCATTTTCATTATGGTTCAA+TGG | - | chr1_4:73634561-73634580 | None:intergenic | 25.0% |
! | TTCACTTCTAACTTTATCAT+GGG | + | chr1_4:73634585-73634604 | Msa0184290:CDS | 25.0% |
!!! | ACTCTGATTTGTTGAATTTA+TGG | - | chr1_4:73634703-73634722 | None:intergenic | 25.0% |
!!! | AATTCAAGTATTGGTTCATT+TGG | + | chr1_4:73634798-73634817 | Msa0184290:CDS | 25.0% |
!! | ATTGGTTCATTTGGAAATAT+TGG | + | chr1_4:73634807-73634826 | Msa0184290:CDS | 25.0% |
! | GTAAAAGCAGTCTTAATTAT+AGG | + | chr1_4:73634892-73634911 | Msa0184290:CDS | 25.0% |
!!! | TATAAAAATACCTTTGAAGC+TGG | + | chr1_4:73635026-73635045 | Msa0184290:CDS | 25.0% |
!!! | ATAAAAATACCTTTGAAGCT+GGG | + | chr1_4:73635027-73635046 | Msa0184290:CDS | 25.0% |
!!! | ATATCATTTTTCCAAAATGC+TGG | + | chr1_4:73635454-73635473 | Msa0184290:intron | 25.0% |
! | CATGGCTATAATTTATTCAT+TGG | - | chr1_4:73635481-73635500 | None:intergenic | 25.0% |
! | TTTACTTGAATCAGAAAGTA+TGG | + | chr1_4:73635743-73635762 | Msa0184290:intron | 25.0% |
! | AAAAACACATTAATACATGC+AGG | - | chr1_4:73635779-73635798 | None:intergenic | 25.0% |
! | TACAAGGGATTTACTATATA+AGG | + | chr1_4:73635990-73636009 | Msa0184290:three_prime_UTR | 25.0% |
! | ACAAGGGATTTACTATATAA+GGG | + | chr1_4:73635991-73636010 | Msa0184290:three_prime_UTR | 25.0% |
! | CTTGTAATCAAGTTATATGA+TGG | + | chr1_4:73636061-73636080 | Msa0184290:three_prime_UTR | 25.0% |
! | AAAAGAAAATAAAAGGGAGA+AGG | - | chr1_4:73636145-73636164 | None:intergenic | 25.0% |
! | TATCATTGAAATGTTCATCT+AGG | + | chr1_4:73636315-73636334 | Msa0184290:three_prime_UTR | 25.0% |
!! | ATGAATCAGCTAACATTTTA+AGG | - | chr1_4:73636343-73636362 | None:intergenic | 25.0% |
GTATCATGTATGTAACTGAT+TGG | + | chr1_4:73632910-73632929 | Msa0184290:intron | 30.0% | |
GTATGTAACTGATTGGAATT+TGG | + | chr1_4:73632917-73632936 | Msa0184290:intron | 30.0% | |
ACAAAAACATCTGACATCAT+CGG | - | chr1_4:73632945-73632964 | None:intergenic | 30.0% | |
!! | GATGTTACTACTTTTGGTAT+TGG | + | chr1_4:73632981-73633000 | Msa0184290:intron | 30.0% |
! | AGACAGTATTTTCAGAACTT+TGG | + | chr1_4:73633189-73633208 | Msa0184290:CDS | 30.0% |
ATGGAAAAACATGTCATAGA+TGG | + | chr1_4:73633315-73633334 | Msa0184290:CDS | 30.0% | |
AAGCAATTGTAAAGTGTAGT+TGG | + | chr1_4:73633661-73633680 | Msa0184290:intron | 30.0% | |
AATTGATGCTTGAGATGTTA+AGG | + | chr1_4:73633709-73633728 | Msa0184290:intron | 30.0% | |
! | ATCAGAATTATTTAGAGCAC+TGG | - | chr1_4:73633809-73633828 | None:intergenic | 30.0% |
CTAAATAATTCTGATCTGCT+AGG | + | chr1_4:73633814-73633833 | Msa0184290:intron | 30.0% | |
CGCACAAAAAAGATATTTGT+TGG | + | chr1_4:73634093-73634112 | Msa0184290:CDS | 30.0% | |
ATTCATCACATATGATTCTG+AGG | + | chr1_4:73634233-73634252 | Msa0184290:CDS | 30.0% | |
TCACGAACTTAATGGTAAAA+TGG | + | chr1_4:73634287-73634306 | Msa0184290:CDS | 30.0% | |
ACTTAATGGTAAAATGGTTG+AGG | + | chr1_4:73634293-73634312 | Msa0184290:CDS | 30.0% | |
TAAAATGGTTGAGGTTAAGA+GGG | + | chr1_4:73634302-73634321 | Msa0184290:CDS | 30.0% | |
!!! | AGAGTTGGTAGTTTTTCTAA+TGG | + | chr1_4:73634396-73634415 | Msa0184290:CDS | 30.0% |
!! | TTTTTCTAATGGTTTTGCTC+AGG | + | chr1_4:73634407-73634426 | Msa0184290:CDS | 30.0% |
!! | TTTTCTAATGGTTTTGCTCA+GGG | + | chr1_4:73634408-73634427 | Msa0184290:CDS | 30.0% |
TGAAAAGAGAATATCCACTA+CGG | - | chr1_4:73634503-73634522 | None:intergenic | 30.0% | |
! | TTTTCATTATGGTTCAATGG+TGG | - | chr1_4:73634558-73634577 | None:intergenic | 30.0% |
CTTCACTTCTAACTTTATCA+TGG | + | chr1_4:73634584-73634603 | Msa0184290:CDS | 30.0% | |
ATTCAACAAATCAGAGTTTG+TGG | + | chr1_4:73634706-73634725 | Msa0184290:CDS | 30.0% | |
TTCAACAAATCAGAGTTTGT+GGG | + | chr1_4:73634707-73634726 | Msa0184290:CDS | 30.0% | |
GGAAGTGAAAATTCAAGTAT+TGG | + | chr1_4:73634789-73634808 | Msa0184290:CDS | 30.0% | |
! | ATAATTGCCATTTGAGAAAG+CGG | - | chr1_4:73634997-73635016 | None:intergenic | 30.0% |
! | CAAGTATGGTCTTGATAAAA+TGG | - | chr1_4:73635053-73635072 | None:intergenic | 30.0% |
! | CATTTTATCAAGACCATACT+TGG | + | chr1_4:73635051-73635070 | Msa0184290:CDS | 30.0% |
ATCAACAACTTCAGAATTAG+AGG | + | chr1_4:73635076-73635095 | Msa0184290:CDS | 30.0% | |
TTTGCGCATTAAATCTGAAA+CGG | - | chr1_4:73635135-73635154 | None:intergenic | 30.0% | |
CTCAAATTATGGTCATAACA+TGG | - | chr1_4:73635499-73635518 | None:intergenic | 30.0% | |
AGATACACCTTACTATGAAA+AGG | + | chr1_4:73635623-73635642 | Msa0184290:intron | 30.0% | |
GATACACCTTACTATGAAAA+GGG | + | chr1_4:73635624-73635643 | Msa0184290:intron | 30.0% | |
ATACACCTTACTATGAAAAG+GGG | + | chr1_4:73635625-73635644 | Msa0184290:intron | 30.0% | |
! | TTTTGACCATGTTTTACTTC+AGG | + | chr1_4:73635795-73635814 | Msa0184290:intron | 30.0% |
AAAATTTCGTTAGAGCCAAT+TGG | + | chr1_4:73635928-73635947 | Msa0184290:CDS | 30.0% | |
AAATACACAGAGACTTACAA+GGG | + | chr1_4:73635975-73635994 | Msa0184290:three_prime_UTR | 30.0% | |
!! | TTGAGTTGAGTGTGAATTAT+AGG | + | chr1_4:73636014-73636033 | Msa0184290:three_prime_UTR | 30.0% |
TTCAAACTGTTATTCCTCTT+TGG | + | chr1_4:73636187-73636206 | Msa0184290:three_prime_UTR | 30.0% | |
AGCATAAGAAGAAAGAGAGA+GGG | - | chr1_4:73632518-73632537 | None:intergenic | 35.0% | |
AAGCATAAGAAGAAAGAGAG+AGG | - | chr1_4:73632519-73632538 | None:intergenic | 35.0% | |
!! | ACTGAATTGGGTTAGTTTGA+TGG | - | chr1_4:73632685-73632704 | None:intergenic | 35.0% |
ATTTATAGGACACAGATACG+AGG | + | chr1_4:73632866-73632885 | Msa0184290:intron | 35.0% | |
!! | TACGAGGTTTTGTGTTTGTT+TGG | + | chr1_4:73632882-73632901 | Msa0184290:intron | 35.0% |
!! | TGGTTTGTTGCAATGATTGT+TGG | + | chr1_4:73633001-73633020 | Msa0184290:intron | 35.0% |
! | ATTGGATTATGTGAAAGTGC+AGG | + | chr1_4:73633100-73633119 | Msa0184290:intron | 35.0% |
! | TTGGATTATGTGAAAGTGCA+GGG | + | chr1_4:73633101-73633120 | Msa0184290:intron | 35.0% |
TCTGAAAATACTGTCTGAGT+CGG | - | chr1_4:73633185-73633204 | None:intergenic | 35.0% | |
! | AGTTGAAGCTGTGATAATGA+AGG | + | chr1_4:73633218-73633237 | Msa0184290:CDS | 35.0% |
! | AAGCTGTGATAATGAAGGAT+CGG | + | chr1_4:73633223-73633242 | Msa0184290:CDS | 35.0% |
! | TTTTTCCATAACAACGCGTT+CGG | - | chr1_4:73633304-73633323 | None:intergenic | 35.0% |
! | CAACTTCAGTTTAGAACAAG+AGG | + | chr1_4:73633468-73633487 | Msa0184290:intron | 35.0% |
TTGTCATGCATTTAACATGC+AGG | + | chr1_4:73633978-73633997 | Msa0184290:intron | 35.0% | |
ACACATTCTGATCATCTCTA+GGG | - | chr1_4:73634023-73634042 | None:intergenic | 35.0% | |
AACACATTCTGATCATCTCT+AGG | - | chr1_4:73634024-73634043 | None:intergenic | 35.0% | |
!!! | TTTTTTGTGCGTATAGGAGT+AGG | - | chr1_4:73634084-73634103 | None:intergenic | 35.0% |
AAAATCACTCTCAGTAACTG+TGG | - | chr1_4:73634130-73634149 | None:intergenic | 35.0% | |
GTAAAATGGTTGAGGTTAAG+AGG | + | chr1_4:73634301-73634320 | Msa0184290:CDS | 35.0% | |
GACTTGGAGATAAATCCTTT+GGG | - | chr1_4:73634332-73634351 | None:intergenic | 35.0% | |
! | TCTCTTTTCAGTCCTAGTTA+TGG | + | chr1_4:73634513-73634532 | Msa0184290:CDS | 35.0% |
! | CTCTTTTCAGTCCTAGTTAT+GGG | + | chr1_4:73634514-73634533 | Msa0184290:CDS | 35.0% |
ATGGCATTATTGTATCTGCT+CGG | - | chr1_4:73634642-73634661 | None:intergenic | 35.0% | |
TCAACAAATCAGAGTTTGTG+GGG | + | chr1_4:73634708-73634727 | Msa0184290:CDS | 35.0% | |
TCTGATGCTTTCTTAGGTTA+CGG | + | chr1_4:73634768-73634787 | Msa0184290:CDS | 35.0% | |
TTGGAAATATTGGATCGCTT+TGG | + | chr1_4:73634817-73634836 | Msa0184290:CDS | 35.0% | |
AATAGTTCCAGCTTGATTAG+TGG | - | chr1_4:73634859-73634878 | None:intergenic | 35.0% | |
ACTAATCAAGCTGGAACTAT+TGG | + | chr1_4:73634858-73634877 | Msa0184290:CDS | 35.0% | |
AGCAGTCTTAATTATAGGCT+TGG | + | chr1_4:73634897-73634916 | Msa0184290:CDS | 35.0% | |
!!! | TGTGATTTTAGGGTCAAAAG+CGG | + | chr1_4:73634923-73634942 | Msa0184290:CDS | 35.0% |
GCTTTCTCAAATGGCAATTA+TGG | + | chr1_4:73634996-73635015 | Msa0184290:CDS | 35.0% | |
AAGTTGTTGATCTCCAAGTA+TGG | - | chr1_4:73635067-73635086 | None:intergenic | 35.0% | |
ACTTCAGAATTAGAGGATTC+TGG | + | chr1_4:73635083-73635102 | Msa0184290:CDS | 35.0% | |
!! | TTTTCAAGGCCAAAACTAAG+AGG | - | chr1_4:73635110-73635129 | None:intergenic | 35.0% |
!! | AATCTGAAACGGCATTTTCA+AGG | - | chr1_4:73635124-73635143 | None:intergenic | 35.0% |
TTGTCTATTAGCAACAGCAT+AGG | - | chr1_4:73635183-73635202 | None:intergenic | 35.0% | |
GCTAATAGACAATCAAACAG+AGG | + | chr1_4:73635191-73635210 | Msa0184290:intron | 35.0% | |
GTATTGTTGACAAGACTCTA+AGG | - | chr1_4:73635380-73635399 | None:intergenic | 35.0% | |
! | TATTCATTGGACCAGCATTT+TGG | - | chr1_4:73635468-73635487 | None:intergenic | 35.0% |
! | TTTCTCCCCTTTTCATAGTA+AGG | - | chr1_4:73635633-73635652 | None:intergenic | 35.0% |
GCAATTCCTGAAGTAAAACA+TGG | - | chr1_4:73635804-73635823 | None:intergenic | 35.0% | |
CAAATACACAGAGACTTACA+AGG | + | chr1_4:73635974-73635993 | Msa0184290:three_prime_UTR | 35.0% | |
GTGTATTACTTTGTCATGAG+AGG | - | chr1_4:73636110-73636129 | None:intergenic | 35.0% | |
CTTCTGGGTTTGTCTTCATT+TGG | + | chr1_4:73632571-73632590 | Msa0184290:five_prime_UTR | 40.0% | |
TATTCATTGGAGGGATTTCC+TGG | + | chr1_4:73633145-73633164 | Msa0184290:CDS | 40.0% | |
ATTCATTGGAGGGATTTCCT+GGG | + | chr1_4:73633146-73633165 | Msa0184290:CDS | 40.0% | |
TTATGATTCATTGTCCCCCA+CGG | + | chr1_4:73633411-73633430 | Msa0184290:intron | 40.0% | |
TGCATCTCAATCATTTCCGT+GGG | - | chr1_4:73633430-73633449 | None:intergenic | 40.0% | |
ATGCATCTCAATCATTTCCG+TGG | - | chr1_4:73633431-73633450 | None:intergenic | 40.0% | |
GTTGGCATGAATGATAGCAA+TGG | + | chr1_4:73633679-73633698 | Msa0184290:intron | 40.0% | |
GTGATGAATCCAAAACCTCT+AGG | - | chr1_4:73634222-73634241 | None:intergenic | 40.0% | |
GGACTTGGAGATAAATCCTT+TGG | - | chr1_4:73634333-73634352 | None:intergenic | 40.0% | |
TTATCTCCAAGTCCAAGTAG+AGG | + | chr1_4:73634339-73634358 | Msa0184290:CDS | 40.0% | |
! | CAGCTAGGTGGATTTAGTTA+CGG | + | chr1_4:73634363-73634382 | Msa0184290:CDS | 40.0% |
TACGGTACTATGAGTAGAGT+TGG | + | chr1_4:73634381-73634400 | Msa0184290:CDS | 40.0% | |
GGATATAATCCAAGCCTGAT+TGG | + | chr1_4:73634429-73634448 | Msa0184290:CDS | 40.0% | |
TATAATCCAAGCCTGATTGG+AGG | + | chr1_4:73634432-73634451 | Msa0184290:CDS | 40.0% | |
GGACATGGACTTAGATTAGA+CGG | + | chr1_4:73634453-73634472 | Msa0184290:CDS | 40.0% | |
AGATTGAGTCCTGCTAATGT+TGG | + | chr1_4:73634477-73634496 | Msa0184290:CDS | 40.0% | |
TGTATGGAGAACTCAATGCA+CGG | - | chr1_4:73634611-73634630 | None:intergenic | 40.0% | |
GAGCAGATACAATAATGCCA+TGG | + | chr1_4:73634641-73634660 | Msa0184290:CDS | 40.0% | |
!! | TATGCTGCTGGTTCAAATGT+TGG | + | chr1_4:73634666-73634685 | Msa0184290:CDS | 40.0% |
AATCAGAGTTTGTGGGGTAA+TGG | + | chr1_4:73634714-73634733 | Msa0184290:CDS | 40.0% | |
TTGATTAGTGGTACCAACAG+AGG | - | chr1_4:73634847-73634866 | None:intergenic | 40.0% | |
! | AGGCTTGGAGATGTGATTTT+AGG | + | chr1_4:73634912-73634931 | Msa0184290:CDS | 40.0% |
! | GGCTTGGAGATGTGATTTTA+GGG | + | chr1_4:73634913-73634932 | Msa0184290:CDS | 40.0% |
!!! | ATTTTAGGGTCAAAAGCGGT+AGG | + | chr1_4:73634927-73634946 | Msa0184290:CDS | 40.0% |
ATAAAATGGCCCAGCTTCAA+AGG | - | chr1_4:73635039-73635058 | None:intergenic | 40.0% | |
! | GATTCTGGTCCTCTTAGTTT+TGG | + | chr1_4:73635098-73635117 | Msa0184290:CDS | 40.0% |
! | TTAATGCGCAAAAGCTCTAG+TGG | + | chr1_4:73635143-73635162 | Msa0184290:CDS | 40.0% |
GCTCAGACACACTCAAATTA+TGG | - | chr1_4:73635510-73635529 | None:intergenic | 40.0% | |
! | TACTTCAGGAATTGCTGCTT+AGG | + | chr1_4:73635809-73635828 | Msa0184290:intron | 40.0% |
ACACAAGCTAGCATCATACA+TGG | - | chr1_4:73635844-73635863 | None:intergenic | 40.0% | |
GTTTCGAAGGTGAATGAATG+TGG | + | chr1_4:73635862-73635881 | Msa0184290:CDS | 40.0% | |
TCGTTAGAGCCAATTGGATT+TGG | + | chr1_4:73635934-73635953 | Msa0184290:CDS | 40.0% | |
TCAACACTGCCAAATCCAAT+TGG | - | chr1_4:73635946-73635965 | None:intergenic | 40.0% | |
! | GATTATGTGAAAGTGCAGGG+TGG | + | chr1_4:73633104-73633123 | Msa0184290:intron | 45.0% |
TCGGTCTTCATTTGTATCCC+AGG | - | chr1_4:73633166-73633185 | None:intergenic | 45.0% | |
GATAATGAAGGATCGGACCA+CGG | + | chr1_4:73633230-73633249 | Msa0184290:CDS | 45.0% | |
ATAATGAAGGATCGGACCAC+GGG | + | chr1_4:73633231-73633250 | Msa0184290:CDS | 45.0% | |
CATCTCAATCATTTCCGTGG+GGG | - | chr1_4:73633428-73633447 | None:intergenic | 45.0% | |
GCATCTCAATCATTTCCGTG+GGG | - | chr1_4:73633429-73633448 | None:intergenic | 45.0% | |
GTTTCTCTCTCACTCTCACA+TGG | + | chr1_4:73633887-73633906 | Msa0184290:intron | 45.0% | |
CATAACACTCAACGTCCTAG+AGG | + | chr1_4:73634204-73634223 | Msa0184290:CDS | 45.0% | |
! | ACTCAACGTCCTAGAGGTTT+TGG | + | chr1_4:73634210-73634229 | Msa0184290:CDS | 45.0% |
TAAGTCCATGTCCTCCAATC+AGG | - | chr1_4:73634446-73634465 | None:intergenic | 45.0% | |
TTCAGTCCTAGTTATGGGAC+AGG | + | chr1_4:73634519-73634538 | Msa0184290:CDS | 45.0% | |
TTGAGTCCTGTCCCATAACT+AGG | - | chr1_4:73634528-73634547 | None:intergenic | 45.0% | |
!! | AGAAAGCATCAGAGCTTGCA+GGG | - | chr1_4:73634761-73634780 | None:intergenic | 45.0% |
!! | AAGAAAGCATCAGAGCTTGC+AGG | - | chr1_4:73634762-73634781 | None:intergenic | 45.0% |
! | GCAAGCTCTGATGCTTTCTT+AGG | + | chr1_4:73634762-73634781 | Msa0184290:CDS | 45.0% |
GTTGGTACCACTAATCAAGC+TGG | + | chr1_4:73634849-73634868 | Msa0184290:CDS | 45.0% | |
!! | GGAACTATTGGCTCTGGTTA+TGG | + | chr1_4:73634870-73634889 | Msa0184290:CDS | 45.0% |
TCATCGTCCGCTTTCTCAAA+TGG | + | chr1_4:73634987-73635006 | Msa0184290:CDS | 45.0% | |
CTCAAATGGCAATTATGGCG+AGG | + | chr1_4:73635001-73635020 | Msa0184290:CDS | 45.0% | |
ATACCAGTGTGTGCGAAATG+CGG | + | chr1_4:73635396-73635415 | Msa0184290:intron | 45.0% | |
ATTTGAGTGTGTCTGAGCAC+AGG | + | chr1_4:73635512-73635531 | Msa0184290:intron | 45.0% | |
! | TCAGGAATTGCTGCTTAGGA+AGG | + | chr1_4:73635813-73635832 | Msa0184290:intron | 45.0% |
! | GATGCTAGCTTGTGTTTCGA+AGG | + | chr1_4:73635849-73635868 | Msa0184290:CDS | 45.0% |
CCAACTCTACTTGTCCAAAG+AGG | - | chr1_4:73636204-73636223 | None:intergenic | 45.0% | |
CCTCTTTGGACAAGTAGAGT+TGG | + | chr1_4:73636201-73636220 | Msa0184290:three_prime_UTR | 45.0% | |
! | TTGGACCATGTTGCTAGTCT+TGG | + | chr1_4:73636220-73636239 | Msa0184290:three_prime_UTR | 45.0% |
!! | ATAAATATGTATATATATAA+TGG | - | chr1_4:73632437-73632456 | None:intergenic | 5.0% |
!!! | TTTTTAAAGATTTTATTTTA+TGG | + | chr1_4:73633044-73633063 | Msa0184290:intron | 5.0% |
GAAGAAAGAGAGAGGGCGAA+AGG | - | chr1_4:73632511-73632530 | None:intergenic | 50.0% | |
! | GTGAAAGTGCAGGGTGGAAA+TGG | + | chr1_4:73633110-73633129 | Msa0184290:intron | 50.0% |
CTCCAATGAATAGCTTCCCC+GGG | - | chr1_4:73633137-73633156 | None:intergenic | 50.0% | |
CCTCCAATGAATAGCTTCCC+CGG | - | chr1_4:73633138-73633157 | None:intergenic | 50.0% | |
CGGGGAAGCTATTCATTGGA+GGG | + | chr1_4:73633136-73633155 | Msa0184290:CDS | 50.0% | |
TGTTGCCGAACGCGTTGTTA+TGG | + | chr1_4:73633296-73633315 | Msa0184290:CDS | 50.0% | |
AGAAGCAACAGCAGCAGTCA+TGG | + | chr1_4:73634048-73634067 | Msa0184290:CDS | 50.0% | |
AGCTGACCTCTACTTGGACT+TGG | - | chr1_4:73634348-73634367 | None:intergenic | 50.0% | |
AGTCCAAGTAGAGGTCAGCT+AGG | + | chr1_4:73634348-73634367 | Msa0184290:CDS | 50.0% | |
AATGCCATGGCATATGCTGC+TGG | + | chr1_4:73634654-73634673 | Msa0184290:CDS | 50.0% | |
TGAACCAGCAGCATATGCCA+TGG | - | chr1_4:73634661-73634680 | None:intergenic | 50.0% | |
!! | TCGCTTTGGAGTACCTCTGT+TGG | + | chr1_4:73634831-73634850 | Msa0184290:CDS | 50.0% |
!! | CAAGCTGGAACTATTGGCTC+TGG | + | chr1_4:73634864-73634883 | Msa0184290:CDS | 50.0% |
GGGTCAAAAGCGGTAGGTTA+TGG | + | chr1_4:73634933-73634952 | Msa0184290:CDS | 50.0% | |
! | ATGCGCAAAAGCTCTAGTGG+TGG | + | chr1_4:73635146-73635165 | Msa0184290:CDS | 50.0% |
TATCCGCATTTCGCACACAC+TGG | - | chr1_4:73635402-73635421 | None:intergenic | 50.0% | |
!! | ACCATGTTGCTAGTCTTGGC+TGG | + | chr1_4:73636224-73636243 | Msa0184290:three_prime_UTR | 50.0% |
ACCAGCCAAGACTAGCAACA+TGG | - | chr1_4:73636228-73636247 | None:intergenic | 50.0% | |
!! | TGTTGCTAGTCTTGGCTGGT+TGG | + | chr1_4:73636228-73636247 | Msa0184290:three_prime_UTR | 50.0% |
GACCCGGGGAAGCTATTCAT+TGG | + | chr1_4:73633132-73633151 | Msa0184290:CDS | 55.0% | |
CCGGGGAAGCTATTCATTGG+AGG | + | chr1_4:73633135-73633154 | Msa0184290:CDS | 55.0% | |
ACAACGCGTTCGGCAACAGA+AGG | - | chr1_4:73633294-73633313 | None:intergenic | 55.0% | |
GTGCGTATAGGAGTAGGAGC+AGG | - | chr1_4:73634078-73634097 | None:intergenic | 55.0% | |
GGTTAAGAGGGCTGTCCCAA+AGG | + | chr1_4:73634314-73634333 | Msa0184290:CDS | 55.0% | |
CCACCTAGCTGACCTCTACT+TGG | - | chr1_4:73634354-73634373 | None:intergenic | 55.0% | |
CCAAGTAGAGGTCAGCTAGG+TGG | + | chr1_4:73634351-73634370 | Msa0184290:CDS | 55.0% | |
CCATGTCCTCCAATCAGGCT+TGG | - | chr1_4:73634441-73634460 | None:intergenic | 55.0% | |
CCAAGCCTGATTGGAGGACA+TGG | + | chr1_4:73634438-73634457 | Msa0184290:CDS | 55.0% | |
CCACTACGGCCAACATTAGC+AGG | - | chr1_4:73634489-73634508 | None:intergenic | 55.0% | |
CCTGCTAATGTTGGCCGTAG+TGG | + | chr1_4:73634486-73634505 | Msa0184290:CDS | 55.0% | |
CTGCTCGGACTTGCACTGTA+TGG | - | chr1_4:73634627-73634646 | None:intergenic | 55.0% | |
! | AGCTCTAGTGGTGGCCACAT+TGG | + | chr1_4:73635155-73635174 | Msa0184290:CDS | 55.0% |
GCTCTAGTGGTGGCCACATT+GGG | + | chr1_4:73635156-73635175 | Msa0184290:CDS | 55.0% | |
CTCTAGTGGTGGCCACATTG+GGG | + | chr1_4:73635157-73635176 | Msa0184290:CDS | 55.0% | |
CAACAGCATAGGCCCCAATG+TGG | - | chr1_4:73635172-73635191 | None:intergenic | 55.0% | |
GTGCAGGGTGGAAATGGACC+CGG | + | chr1_4:73633116-73633135 | Msa0184290:intron | 60.0% | |
TGCAGGGTGGAAATGGACCC+GGG | + | chr1_4:73633117-73633136 | Msa0184290:intron | 60.0% | |
AAAACCACGAGCACGTCCCG+TGG | - | chr1_4:73633250-73633269 | None:intergenic | 60.0% | |
! | ACGGGACGTGCTCGTGGTTT+TGG | + | chr1_4:73633249-73633268 | Msa0184290:CDS | 60.0% |
GCAGGGTGGAAATGGACCCG+GGG | + | chr1_4:73633118-73633137 | Msa0184290:intron | 65.0% | |
CGGACCACGGGACGTGCTCG+TGG | + | chr1_4:73633243-73633262 | Msa0184290:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 73632382 | 73636426 | 73632382 | ID=Msa0184290;Name=Msa0184290 |
chr1_4 | mRNA | 73632382 | 73636426 | 73632382 | ID=Msa0184290-mRNA-1;Parent=Msa0184290;Name=Msa0184290-mRNA-1;_AED=0.04;_eAED=0.04;_QI=218|0.75|0.8|1|0.5|0.4|5|421|518 |
chr1_4 | exon | 73632382 | 73632592 | 73632382 | ID=Msa0184290-mRNA-1:exon:25041;Parent=Msa0184290-mRNA-1 |
chr1_4 | exon | 73633122 | 73633344 | 73633122 | ID=Msa0184290-mRNA-1:exon:25042;Parent=Msa0184290-mRNA-1 |
chr1_4 | exon | 73634000 | 73635187 | 73634000 | ID=Msa0184290-mRNA-1:exon:25043;Parent=Msa0184290-mRNA-1 |
chr1_4 | exon | 73635817 | 73636096 | 73635817 | ID=Msa0184290-mRNA-1:exon:25044;Parent=Msa0184290-mRNA-1 |
chr1_4 | exon | 73636133 | 73636426 | 73636133 | ID=Msa0184290-mRNA-1:exon:25045;Parent=Msa0184290-mRNA-1 |
chr1_4 | five_prime_UTR | 73632382 | 73632592 | 73632382 | ID=Msa0184290-mRNA-1:five_prime_utr;Parent=Msa0184290-mRNA-1 |
chr1_4 | five_prime_UTR | 73633122 | 73633128 | 73633122 | ID=Msa0184290-mRNA-1:five_prime_utr;Parent=Msa0184290-mRNA-1 |
chr1_4 | CDS | 73633129 | 73633344 | 73633129 | ID=Msa0184290-mRNA-1:cds;Parent=Msa0184290-mRNA-1 |
chr1_4 | CDS | 73634000 | 73635187 | 73634000 | ID=Msa0184290-mRNA-1:cds;Parent=Msa0184290-mRNA-1 |
chr1_4 | CDS | 73635817 | 73635969 | 73635817 | ID=Msa0184290-mRNA-1:cds;Parent=Msa0184290-mRNA-1 |
chr1_4 | three_prime_UTR | 73635970 | 73636096 | 73635970 | ID=Msa0184290-mRNA-1:three_prime_utr;Parent=Msa0184290-mRNA-1 |
chr1_4 | three_prime_UTR | 73636133 | 73636426 | 73636133 | ID=Msa0184290-mRNA-1:three_prime_utr;Parent=Msa0184290-mRNA-1 |
Gene Sequence |
Protein sequence |