Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0317120 | XP_003594254.2 | 96.624 | 474 | 16 | 0 | 1 | 474 | 1 | 474 | 0.0 | 934 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0317120 | sp|Q8W034|RNP1_ARATH | 56.614 | 189 | 80 | 1 | 2 | 188 | 4 | 192 | 2.64e-73 | 241 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0184290 | Msa0317120 | 0.959749 | 8.720906e-118 | -8.615850e-47 |
Msa0277340 | Msa0317120 | 0.863935 | 1.745332e-64 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0317120 | MtrunA17_Chr2g0290191 | 96.624 | 474 | 16 | 0 | 1 | 474 | 1 | 474 | 0.0 | 934 |
Msa0317120 | MtrunA17_Chr5g0447761 | 57.783 | 469 | 189 | 7 | 2 | 467 | 4 | 466 | 4.86e-166 | 479 |
Msa0317120 | MtrunA17_Chr3g0101061 | 55.252 | 476 | 192 | 11 | 2 | 467 | 38 | 502 | 3.64e-160 | 465 |
Msa0317120 | MtrunA17_Chr1g0186351 | 60.204 | 196 | 64 | 2 | 2 | 188 | 4 | 194 | 3.32e-79 | 255 |
Msa0317120 | MtrunA17_Chr3g0135111 | 51.852 | 189 | 86 | 1 | 2 | 185 | 8 | 196 | 1.58e-56 | 193 |
Msa0317120 | MtrunA17_Chr3g0120721 | 39.891 | 183 | 95 | 2 | 3 | 184 | 17 | 185 | 4.22e-44 | 159 |
Msa0317120 | MtrunA17_Chr6g0449481 | 31.965 | 341 | 162 | 7 | 3 | 339 | 44 | 318 | 3.62e-41 | 152 |
Msa0317120 | MtrunA17_Chr5g0402191 | 36.000 | 200 | 111 | 4 | 1 | 198 | 1 | 185 | 8.67e-35 | 135 |
Msa0317120 | MtrunA17_Chr5g0402191 | 27.358 | 212 | 122 | 4 | 5 | 185 | 93 | 303 | 1.27e-19 | 90.9 |
Msa0317120 | MtrunA17_Chr5g0402191 | 37.500 | 112 | 67 | 1 | 5 | 113 | 226 | 337 | 9.54e-12 | 67.0 |
Msa0317120 | MtrunA17_Chr8g0375101 | 36.408 | 206 | 112 | 5 | 1 | 202 | 1 | 191 | 1.07e-33 | 131 |
Msa0317120 | MtrunA17_Chr3g0144311 | 30.588 | 170 | 91 | 5 | 5 | 168 | 30 | 178 | 4.84e-20 | 90.5 |
Msa0317120 | MtrunA17_Chr5g0426311 | 50.000 | 68 | 33 | 1 | 5 | 71 | 17 | 84 | 4.58e-19 | 87.4 |
Msa0317120 | MtrunA17_Chr8g0346011 | 36.885 | 122 | 73 | 2 | 5 | 125 | 38 | 156 | 3.13e-18 | 85.5 |
Msa0317120 | MtrunA17_Chr3g0127751 | 42.169 | 83 | 47 | 1 | 5 | 86 | 27 | 109 | 8.06e-18 | 83.2 |
Msa0317120 | MtrunA17_Chr4g0058151 | 30.978 | 184 | 106 | 4 | 5 | 181 | 123 | 292 | 1.28e-17 | 83.6 |
Msa0317120 | MtrunA17_Chr4g0058151 | 32.540 | 126 | 81 | 2 | 102 | 226 | 118 | 240 | 1.20e-11 | 65.9 |
Msa0317120 | MtrunA17_Chr4g0045921 | 29.016 | 193 | 114 | 5 | 5 | 191 | 77 | 252 | 1.52e-17 | 84.3 |
Msa0317120 | MtrunA17_Chr4g0017401 | 42.647 | 68 | 38 | 1 | 5 | 71 | 17 | 84 | 2.95e-17 | 82.0 |
Msa0317120 | MtrunA17_Chr8g0360551 | 26.816 | 179 | 119 | 3 | 5 | 182 | 74 | 241 | 4.72e-17 | 83.6 |
Msa0317120 | MtrunA17_Chr7g0219021 | 46.988 | 83 | 42 | 1 | 1 | 81 | 37 | 119 | 5.23e-17 | 80.9 |
Msa0317120 | MtrunA17_Chr1g0181111 | 30.159 | 189 | 119 | 5 | 5 | 181 | 85 | 272 | 8.07e-17 | 80.9 |
Msa0317120 | MtrunA17_Chr7g0276531 | 47.059 | 68 | 35 | 1 | 5 | 71 | 19 | 86 | 2.56e-16 | 79.0 |
Msa0317120 | MtrunA17_Chr5g0440831 | 23.784 | 185 | 131 | 3 | 1 | 182 | 160 | 337 | 2.72e-15 | 78.6 |
Msa0317120 | MtrunA17_Chr3g0116631 | 30.256 | 195 | 117 | 6 | 4 | 193 | 109 | 289 | 3.30e-15 | 76.3 |
Msa0317120 | MtrunA17_Chr2g0278661 | 41.463 | 82 | 46 | 1 | 2 | 81 | 5 | 86 | 1.50e-14 | 73.6 |
Msa0317120 | MtrunA17_Chr3g0121631 | 42.683 | 82 | 46 | 1 | 1 | 81 | 33 | 114 | 1.65e-14 | 70.9 |
Msa0317120 | MtrunA17_Chr7g0255011 | 22.905 | 179 | 137 | 1 | 5 | 182 | 128 | 306 | 4.05e-14 | 74.7 |
Msa0317120 | MtrunA17_Chr7g0267571 | 27.411 | 197 | 128 | 6 | 2 | 190 | 107 | 296 | 1.01e-13 | 72.4 |
Msa0317120 | MtrunA17_Chr3g0119311 | 38.947 | 95 | 54 | 2 | 5 | 95 | 37 | 131 | 3.00e-13 | 67.0 |
Msa0317120 | MtrunA17_Chr1g0153871 | 30.682 | 176 | 105 | 6 | 6 | 176 | 192 | 355 | 5.24e-13 | 70.9 |
Msa0317120 | MtrunA17_Chr4g0035051 | 36.842 | 76 | 46 | 1 | 5 | 78 | 9 | 84 | 6.31e-13 | 65.5 |
Msa0317120 | MtrunA17_Chr4g0050781 | 36.709 | 79 | 48 | 1 | 5 | 81 | 8 | 86 | 9.35e-13 | 67.4 |
Msa0317120 | MtrunA17_Chr4g0050781 | 36.709 | 79 | 49 | 1 | 107 | 184 | 8 | 86 | 3.29e-12 | 65.9 |
Msa0317120 | MtrunA17_Chr7g0266751 | 41.026 | 78 | 44 | 1 | 5 | 80 | 33 | 110 | 9.99e-13 | 65.5 |
Msa0317120 | MtrunA17_Chr1g0210241 | 39.241 | 79 | 46 | 1 | 5 | 81 | 8 | 86 | 1.25e-12 | 68.6 |
Msa0317120 | MtrunA17_Chr1g0210241 | 36.709 | 79 | 49 | 1 | 107 | 184 | 8 | 86 | 1.93e-12 | 67.8 |
Msa0317120 | MtrunA17_Chr2g0327921 | 39.286 | 84 | 42 | 2 | 107 | 185 | 8 | 87 | 1.47e-12 | 63.5 |
Msa0317120 | MtrunA17_Chr4g0061451 | 41.772 | 79 | 44 | 1 | 5 | 81 | 43 | 121 | 1.92e-12 | 67.8 |
Msa0317120 | MtrunA17_Chr4g0035031 | 38.158 | 76 | 45 | 1 | 5 | 78 | 9 | 84 | 3.45e-12 | 65.5 |
Msa0317120 | MtrunA17_Chr3g0110211 | 28.000 | 225 | 131 | 7 | 7 | 226 | 28 | 226 | 5.55e-12 | 67.4 |
Msa0317120 | MtrunA17_Chr6g0465631 | 27.389 | 157 | 108 | 4 | 11 | 164 | 113 | 266 | 6.22e-12 | 67.8 |
Msa0317120 | MtrunA17_Chr6g0466451 | 27.389 | 157 | 108 | 4 | 11 | 164 | 113 | 266 | 6.27e-12 | 67.8 |
Msa0317120 | MtrunA17_Chr2g0328791 | 27.568 | 185 | 115 | 5 | 6 | 184 | 17 | 188 | 7.34e-12 | 67.4 |
Msa0317120 | MtrunA17_Chr4g0074711 | 27.374 | 179 | 109 | 6 | 6 | 176 | 169 | 334 | 1.34e-11 | 66.6 |
Msa0317120 | MtrunA17_Chr4g0035001 | 36.842 | 76 | 46 | 1 | 5 | 78 | 7 | 82 | 1.53e-11 | 62.8 |
Msa0317120 | MtrunA17_Chr7g0268551 | 23.345 | 287 | 165 | 8 | 5 | 265 | 17 | 274 | 1.56e-11 | 66.2 |
Msa0317120 | MtrunA17_Chr7g0219031 | 49.057 | 53 | 27 | 0 | 1 | 53 | 37 | 89 | 1.58e-11 | 61.6 |
Msa0317120 | MtrunA17_Chr1g0177101 | 27.568 | 185 | 118 | 5 | 5 | 182 | 109 | 284 | 1.59e-11 | 65.5 |
Msa0317120 | MtrunA17_Chr1g0201151 | 26.816 | 179 | 112 | 7 | 6 | 176 | 211 | 378 | 3.01e-11 | 65.9 |
Msa0317120 | MtrunA17_Chr4g0044541 | 25.281 | 178 | 110 | 4 | 6 | 181 | 36 | 192 | 7.12e-11 | 64.7 |
Msa0317120 | MtrunA17_Chr4g0070231 | 29.885 | 174 | 93 | 6 | 6 | 157 | 133 | 299 | 8.91e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0317120 | AT3G07810.1 | 53.015 | 481 | 210 | 10 | 2 | 468 | 4 | 482 | 5.05e-142 | 418 |
Msa0317120 | AT3G07810.2 | 53.015 | 481 | 210 | 10 | 2 | 468 | 4 | 482 | 6.34e-142 | 418 |
Msa0317120 | AT5G47620.1 | 59.831 | 356 | 131 | 7 | 1 | 354 | 3 | 348 | 8.68e-134 | 395 |
Msa0317120 | AT5G47620.2 | 59.831 | 356 | 131 | 7 | 1 | 354 | 3 | 348 | 8.68e-134 | 395 |
Msa0317120 | AT5G47620.5 | 59.831 | 356 | 131 | 7 | 1 | 354 | 3 | 348 | 8.68e-134 | 395 |
Msa0317120 | AT5G47620.4 | 56.349 | 378 | 131 | 8 | 1 | 354 | 3 | 370 | 9.44e-129 | 383 |
Msa0317120 | AT4G26650.1 | 48.148 | 486 | 165 | 19 | 2 | 461 | 13 | 437 | 4.50e-117 | 353 |
Msa0317120 | AT4G26650.2 | 48.148 | 486 | 165 | 19 | 2 | 461 | 10 | 434 | 4.51e-117 | 353 |
Msa0317120 | AT5G55550.5 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 1.41e-109 | 333 |
Msa0317120 | AT5G55550.4 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 1.41e-109 | 333 |
Msa0317120 | AT5G55550.9 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 1.41e-109 | 333 |
Msa0317120 | AT5G55550.7 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 1.41e-109 | 333 |
Msa0317120 | AT5G55550.1 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 1.41e-109 | 333 |
Msa0317120 | AT5G55550.2 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 2.14e-109 | 333 |
Msa0317120 | AT5G55550.3 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 2.14e-109 | 333 |
Msa0317120 | AT5G55550.6 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 2.14e-109 | 333 |
Msa0317120 | AT5G55550.11 | 58.485 | 330 | 108 | 12 | 2 | 317 | 4 | 318 | 2.14e-109 | 333 |
Msa0317120 | AT5G55550.8 | 51.194 | 377 | 108 | 13 | 2 | 317 | 4 | 365 | 1.57e-100 | 312 |
Msa0317120 | AT5G55550.10 | 51.194 | 377 | 108 | 13 | 2 | 317 | 4 | 365 | 1.97e-100 | 312 |
Msa0317120 | AT5G47620.3 | 55.634 | 284 | 114 | 7 | 73 | 354 | 15 | 288 | 1.80e-87 | 274 |
Msa0317120 | AT5G47620.3 | 36.709 | 79 | 49 | 1 | 5 | 82 | 47 | 125 | 8.34e-13 | 70.5 |
Msa0317120 | AT4G14300.1 | 56.614 | 189 | 80 | 1 | 2 | 188 | 4 | 192 | 2.68e-74 | 241 |
Msa0317120 | AT4G14300.2 | 56.614 | 189 | 80 | 1 | 2 | 188 | 4 | 192 | 2.68e-74 | 241 |
Msa0317120 | AT2G33410.1 | 55.026 | 189 | 83 | 1 | 2 | 188 | 4 | 192 | 1.81e-71 | 233 |
Msa0317120 | AT1G58470.2 | 48.000 | 200 | 84 | 3 | 2 | 185 | 4 | 199 | 2.76e-52 | 182 |
Msa0317120 | AT1G58470.1 | 48.000 | 200 | 84 | 3 | 2 | 185 | 4 | 199 | 2.76e-52 | 182 |
Msa0317120 | AT1G17640.2 | 48.087 | 183 | 83 | 2 | 3 | 184 | 65 | 236 | 1.38e-51 | 180 |
Msa0317120 | AT1G17640.1 | 48.087 | 183 | 83 | 2 | 3 | 184 | 65 | 236 | 1.38e-51 | 180 |
Msa0317120 | AT1G17640.3 | 48.087 | 183 | 83 | 2 | 3 | 184 | 65 | 236 | 1.38e-51 | 180 |
Msa0317120 | AT3G13224.2 | 41.121 | 214 | 105 | 4 | 3 | 214 | 18 | 212 | 4.25e-47 | 167 |
Msa0317120 | AT3G13224.3 | 40.566 | 212 | 105 | 4 | 5 | 214 | 11 | 203 | 3.68e-45 | 162 |
Msa0317120 | AT3G13224.3 | 48.750 | 80 | 40 | 1 | 105 | 184 | 9 | 87 | 6.70e-18 | 85.5 |
Msa0317120 | AT3G13224.1 | 44.512 | 164 | 79 | 1 | 3 | 166 | 18 | 169 | 1.85e-44 | 157 |
Msa0317120 | AT3G13224.1 | 50.000 | 78 | 38 | 1 | 107 | 184 | 20 | 96 | 1.13e-17 | 82.8 |
Msa0317120 | AT5G40490.1 | 43.407 | 182 | 88 | 2 | 4 | 184 | 42 | 209 | 1.07e-43 | 160 |
Msa0317120 | AT5G40490.2 | 44.512 | 164 | 76 | 2 | 22 | 184 | 43 | 192 | 4.43e-39 | 147 |
Msa0317120 | AT5G40490.2 | 33.333 | 102 | 67 | 1 | 83 | 184 | 2 | 102 | 1.24e-12 | 70.1 |
Msa0317120 | AT5G40490.2 | 36.905 | 84 | 51 | 1 | 5 | 86 | 114 | 197 | 1.75e-11 | 66.6 |
Msa0317120 | AT4G36960.1 | 38.830 | 188 | 98 | 4 | 5 | 190 | 4 | 176 | 3.49e-37 | 141 |
Msa0317120 | AT4G36960.2 | 38.830 | 188 | 98 | 4 | 5 | 190 | 4 | 176 | 3.49e-37 | 141 |
Msa0317120 | AT1G33470.2 | 34.839 | 155 | 83 | 5 | 5 | 157 | 8 | 146 | 9.82e-21 | 92.0 |
Msa0317120 | AT1G33470.2 | 35.106 | 94 | 58 | 1 | 107 | 197 | 8 | 101 | 7.91e-11 | 62.8 |
Msa0317120 | AT1G33470.3 | 34.839 | 155 | 83 | 5 | 5 | 157 | 8 | 146 | 1.10e-20 | 91.7 |
Msa0317120 | AT1G33470.3 | 35.106 | 94 | 58 | 1 | 107 | 197 | 8 | 101 | 8.67e-11 | 62.8 |
Msa0317120 | AT1G33470.1 | 34.839 | 155 | 83 | 5 | 5 | 157 | 8 | 146 | 1.17e-20 | 91.7 |
Msa0317120 | AT1G33470.1 | 35.106 | 94 | 58 | 1 | 107 | 197 | 8 | 101 | 8.79e-11 | 62.8 |
Msa0317120 | AT1G76460.1 | 42.667 | 75 | 42 | 1 | 5 | 78 | 25 | 99 | 7.16e-18 | 84.3 |
Msa0317120 | AT1G20880.2 | 42.667 | 75 | 42 | 1 | 5 | 78 | 25 | 99 | 1.01e-17 | 84.0 |
Msa0317120 | AT1G20880.3 | 42.667 | 75 | 42 | 1 | 5 | 78 | 25 | 99 | 1.01e-17 | 84.0 |
Msa0317120 | AT1G20880.1 | 42.667 | 75 | 42 | 1 | 5 | 78 | 25 | 99 | 1.01e-17 | 84.0 |
Msa0317120 | AT1G22330.1 | 45.333 | 75 | 40 | 1 | 5 | 78 | 18 | 92 | 1.66e-17 | 83.6 |
Msa0317120 | AT2G46780.1 | 39.091 | 110 | 54 | 3 | 5 | 102 | 23 | 131 | 2.85e-17 | 83.6 |
Msa0317120 | AT2G46780.2 | 39.091 | 110 | 54 | 3 | 5 | 102 | 23 | 131 | 2.85e-17 | 83.6 |
Msa0317120 | AT1G78260.1 | 47.059 | 68 | 35 | 1 | 5 | 71 | 18 | 85 | 3.25e-17 | 82.4 |
Msa0317120 | AT1G78260.2 | 44.000 | 75 | 41 | 1 | 5 | 78 | 18 | 92 | 7.84e-17 | 81.3 |
Msa0317120 | AT4G24770.1 | 29.592 | 196 | 119 | 5 | 2 | 193 | 148 | 328 | 1.20e-16 | 81.6 |
Msa0317120 | AT4G24770.2 | 29.592 | 196 | 119 | 5 | 2 | 193 | 148 | 328 | 1.20e-16 | 81.6 |
Msa0317120 | AT2G37220.1 | 29.319 | 191 | 119 | 5 | 5 | 181 | 92 | 280 | 1.59e-16 | 80.5 |
Msa0317120 | AT3G52380.1 | 33.514 | 185 | 102 | 7 | 2 | 177 | 114 | 286 | 1.59e-16 | 81.3 |
Msa0317120 | AT3G15010.1 | 29.050 | 179 | 115 | 3 | 5 | 182 | 76 | 243 | 3.30e-16 | 81.3 |
Msa0317120 | AT3G15010.2 | 29.050 | 179 | 115 | 3 | 5 | 182 | 76 | 243 | 3.30e-16 | 81.3 |
Msa0317120 | AT2G41060.1 | 26.437 | 174 | 108 | 3 | 5 | 168 | 129 | 292 | 8.81e-16 | 80.1 |
Msa0317120 | AT2G41060.3 | 26.437 | 174 | 108 | 3 | 5 | 168 | 129 | 292 | 8.81e-16 | 80.1 |
Msa0317120 | AT2G41060.2 | 26.437 | 174 | 108 | 3 | 5 | 168 | 129 | 292 | 8.81e-16 | 80.1 |
Msa0317120 | AT3G23830.2 | 43.038 | 79 | 43 | 1 | 5 | 81 | 36 | 114 | 1.05e-15 | 74.3 |
Msa0317120 | AT3G23830.2 | 34.884 | 86 | 55 | 1 | 107 | 191 | 36 | 121 | 7.95e-12 | 63.2 |
Msa0317120 | AT3G23830.1 | 43.038 | 79 | 43 | 1 | 5 | 81 | 36 | 114 | 1.05e-15 | 74.3 |
Msa0317120 | AT3G23830.1 | 34.884 | 86 | 55 | 1 | 107 | 191 | 36 | 121 | 7.95e-12 | 63.2 |
Msa0317120 | AT4G16280.4 | 29.592 | 196 | 114 | 6 | 5 | 192 | 46 | 225 | 1.74e-15 | 80.1 |
Msa0317120 | AT4G16280.3 | 29.592 | 196 | 114 | 6 | 5 | 192 | 121 | 300 | 1.80e-15 | 79.7 |
Msa0317120 | AT4G16280.2 | 29.592 | 196 | 114 | 6 | 5 | 192 | 121 | 300 | 1.97e-15 | 79.7 |
Msa0317120 | AT4G13850.4 | 46.835 | 79 | 40 | 1 | 5 | 81 | 36 | 114 | 2.81e-15 | 73.2 |
Msa0317120 | AT4G13850.3 | 46.835 | 79 | 40 | 1 | 5 | 81 | 36 | 114 | 4.41e-15 | 72.8 |
Msa0317120 | AT4G13850.2 | 46.835 | 79 | 40 | 1 | 5 | 81 | 36 | 114 | 5.48e-15 | 72.8 |
Msa0317120 | AT4G13850.1 | 46.835 | 79 | 40 | 1 | 5 | 81 | 36 | 114 | 6.16e-15 | 72.8 |
Msa0317120 | AT4G39260.3 | 39.241 | 79 | 46 | 1 | 5 | 81 | 7 | 85 | 9.36e-15 | 70.5 |
Msa0317120 | AT4G39260.3 | 35.165 | 91 | 52 | 3 | 107 | 197 | 7 | 90 | 4.12e-11 | 60.1 |
Msa0317120 | AT1G22910.2 | 36.000 | 75 | 47 | 1 | 5 | 78 | 14 | 88 | 1.68e-14 | 73.6 |
Msa0317120 | AT1G22910.1 | 36.000 | 75 | 47 | 1 | 5 | 78 | 14 | 88 | 1.69e-14 | 73.9 |
Msa0317120 | AT3G56860.9 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0317120 | AT3G56860.11 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0317120 | AT3G56860.8 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0317120 | AT3G56860.5 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0317120 | AT3G56860.7 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0317120 | AT3G56860.2 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0317120 | AT3G56860.6 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0317120 | AT3G56860.10 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0317120 | AT3G56860.3 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0317120 | AT3G56860.1 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0317120 | AT3G56860.4 | 23.232 | 198 | 136 | 4 | 5 | 194 | 141 | 330 | 4.17e-14 | 75.1 |
Msa0317120 | AT2G36660.1 | 28.824 | 170 | 108 | 6 | 6 | 169 | 203 | 365 | 4.35e-14 | 75.5 |
Msa0317120 | AT4G39260.2 | 39.474 | 76 | 44 | 1 | 5 | 78 | 7 | 82 | 5.69e-14 | 69.3 |
Msa0317120 | AT1G22910.3 | 36.000 | 75 | 47 | 1 | 5 | 78 | 14 | 88 | 8.03e-14 | 73.2 |
Msa0317120 | AT5G11412.1 | 42.667 | 75 | 42 | 1 | 5 | 78 | 53 | 127 | 9.58e-14 | 70.1 |
Msa0317120 | AT3G54770.3 | 38.667 | 75 | 45 | 1 | 5 | 78 | 18 | 92 | 1.37e-13 | 71.2 |
Msa0317120 | AT4G39260.1 | 39.474 | 76 | 44 | 1 | 5 | 78 | 7 | 82 | 1.56e-13 | 69.3 |
Msa0317120 | AT3G52150.2 | 27.979 | 193 | 120 | 5 | 1 | 181 | 68 | 253 | 1.89e-13 | 70.9 |
Msa0317120 | AT3G52150.1 | 27.979 | 193 | 120 | 5 | 1 | 181 | 68 | 253 | 1.89e-13 | 70.9 |
Msa0317120 | AT3G54770.1 | 38.667 | 75 | 45 | 1 | 5 | 78 | 18 | 92 | 2.17e-13 | 70.9 |
Msa0317120 | AT4G34110.1 | 28.249 | 177 | 117 | 5 | 6 | 179 | 217 | 386 | 2.65e-13 | 72.8 |
Msa0317120 | AT1G60650.2 | 44.304 | 79 | 43 | 1 | 107 | 184 | 13 | 91 | 3.13e-13 | 70.9 |
Msa0317120 | AT1G60650.1 | 44.304 | 79 | 43 | 1 | 107 | 184 | 13 | 91 | 3.13e-13 | 70.9 |
Msa0317120 | AT5G61030.2 | 40.789 | 76 | 42 | 1 | 1 | 76 | 37 | 109 | 4.33e-13 | 70.5 |
Msa0317120 | AT5G61030.1 | 40.789 | 76 | 42 | 1 | 1 | 76 | 37 | 109 | 4.33e-13 | 70.5 |
Msa0317120 | AT5G50250.1 | 27.869 | 183 | 119 | 4 | 2 | 181 | 111 | 283 | 5.07e-13 | 70.1 |
Msa0317120 | AT5G50250.1 | 31.788 | 151 | 98 | 3 | 93 | 241 | 100 | 247 | 6.80e-11 | 63.9 |
Msa0317120 | AT2G23350.1 | 28.977 | 176 | 111 | 5 | 6 | 176 | 227 | 393 | 6.09e-13 | 72.0 |
Msa0317120 | AT4G39260.4 | 43.333 | 60 | 34 | 0 | 5 | 64 | 7 | 66 | 6.95e-13 | 65.5 |
Msa0317120 | AT5G06210.1 | 46.479 | 71 | 36 | 1 | 5 | 73 | 35 | 105 | 7.11e-13 | 66.6 |
Msa0317120 | AT4G00830.2 | 26.596 | 188 | 105 | 7 | 5 | 184 | 117 | 279 | 1.18e-12 | 70.5 |
Msa0317120 | AT4G00830.1 | 26.596 | 188 | 105 | 7 | 5 | 184 | 117 | 279 | 1.18e-12 | 70.5 |
Msa0317120 | AT4G00830.6 | 26.596 | 188 | 105 | 7 | 5 | 184 | 117 | 279 | 1.18e-12 | 70.5 |
Msa0317120 | AT4G27000.1 | 29.268 | 164 | 103 | 4 | 6 | 164 | 175 | 330 | 1.21e-12 | 70.1 |
Msa0317120 | AT4G13860.1 | 41.892 | 74 | 41 | 1 | 5 | 76 | 4 | 77 | 1.55e-12 | 63.9 |
Msa0317120 | AT4G00830.4 | 27.957 | 186 | 105 | 7 | 5 | 184 | 117 | 279 | 1.70e-12 | 70.1 |
Msa0317120 | AT1G60000.1 | 25.967 | 181 | 117 | 4 | 5 | 181 | 86 | 253 | 1.72e-12 | 68.2 |
Msa0317120 | AT3G26420.1 | 36.170 | 94 | 56 | 2 | 5 | 96 | 8 | 99 | 1.86e-12 | 67.8 |
Msa0317120 | AT5G59865.1 | 32.911 | 79 | 51 | 1 | 5 | 81 | 27 | 105 | 2.28e-12 | 64.3 |
Msa0317120 | AT2G21660.2 | 38.158 | 76 | 45 | 1 | 5 | 78 | 9 | 84 | 2.91e-12 | 65.1 |
Msa0317120 | AT2G21660.1 | 38.158 | 76 | 45 | 1 | 5 | 78 | 9 | 84 | 4.03e-12 | 65.5 |
Msa0317120 | AT5G04280.1 | 37.975 | 79 | 48 | 1 | 107 | 184 | 8 | 86 | 4.32e-12 | 67.8 |
Msa0317120 | AT5G04280.1 | 35.789 | 95 | 54 | 2 | 5 | 97 | 8 | 97 | 5.68e-12 | 67.4 |
Msa0317120 | AT1G71770.1 | 29.050 | 179 | 107 | 9 | 6 | 176 | 241 | 407 | 6.49e-12 | 68.6 |
Msa0317120 | AT1G71770.2 | 29.050 | 179 | 107 | 9 | 6 | 176 | 241 | 407 | 6.49e-12 | 68.6 |
Msa0317120 | AT3G16380.1 | 26.064 | 188 | 131 | 6 | 2 | 185 | 200 | 383 | 1.13e-11 | 67.8 |
Msa0317120 | AT3G16380.1 | 25.137 | 183 | 119 | 5 | 6 | 185 | 114 | 281 | 3.52e-11 | 66.2 |
Msa0317120 | AT4G00830.3 | 27.419 | 186 | 98 | 6 | 5 | 184 | 117 | 271 | 1.14e-11 | 67.4 |
Msa0317120 | AT4G00830.5 | 27.419 | 186 | 98 | 6 | 5 | 184 | 117 | 271 | 1.14e-11 | 67.4 |
Msa0317120 | AT5G53720.1 | 41.333 | 75 | 43 | 1 | 5 | 78 | 10 | 84 | 1.50e-11 | 61.6 |
Msa0317120 | AT5G54900.1 | 29.586 | 169 | 97 | 7 | 6 | 164 | 156 | 312 | 2.25e-11 | 66.2 |
Msa0317120 | AT5G54900.1 | 25.128 | 195 | 130 | 6 | 2 | 195 | 58 | 237 | 3.95e-11 | 65.5 |
Msa0317120 | AT1G18630.1 | 38.667 | 75 | 44 | 1 | 1 | 73 | 33 | 107 | 2.28e-11 | 62.4 |
Msa0317120 | AT3G06970.1 | 40.000 | 75 | 44 | 1 | 5 | 78 | 13 | 87 | 3.05e-11 | 65.1 |
Msa0317120 | AT1G74230.1 | 40.260 | 77 | 42 | 1 | 1 | 77 | 31 | 103 | 3.61e-11 | 64.7 |
Msa0317120 | AT1G01080.1 | 26.064 | 188 | 129 | 4 | 3 | 184 | 107 | 290 | 5.17e-11 | 64.3 |
Msa0317120 | AT1G49760.1 | 27.374 | 179 | 116 | 5 | 6 | 179 | 226 | 395 | 6.74e-11 | 65.5 |
Msa0317120 | AT1G49760.2 | 27.374 | 179 | 116 | 5 | 6 | 179 | 226 | 395 | 6.74e-11 | 65.5 |
Find 139 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTCTGATTTGTTGAATTTA+TGG | 0.107746 | 2_4:+14631598 | None:intergenic |
TACAAGGGATTTACTATATA+AGG | 0.163431 | 2_4:-14630308 | Msa0317120:three_prime_UTR |
ATTGGTTCATTTGGAAATAT+TGG | 0.185824 | 2_4:-14631491 | Msa0317120:CDS |
TCACGAACTTAATGGTAAAA+TGG | 0.231963 | 2_4:-14632011 | Msa0317120:CDS |
GTAAAAGCAGTCTTAATTAT+AGG | 0.247091 | 2_4:-14631406 | Msa0317120:CDS |
TTGAGTTGAGTGTGAATTAT+AGG | 0.247263 | 2_4:-14630284 | Msa0317120:three_prime_UTR |
GCTTTCTCAAATGGCAATTA+TGG | 0.252580 | 2_4:-14631302 | Msa0317120:CDS |
CAAGTATGGTCTTGATAAAA+TGG | 0.260964 | 2_4:+14631248 | None:intergenic |
ACGGGACGTGCTCGTGGTTT+TGG | 0.261674 | 2_4:-14633048 | Msa0317120:CDS |
AATTCAAGTATTGGTTCATT+TGG | 0.263527 | 2_4:-14631500 | Msa0317120:CDS |
GCAAGCTCTGATGCTTTCTT+AGG | 0.264487 | 2_4:-14631536 | Msa0317120:CDS |
TTCAAACTGTTATTCCTCTT+TGG | 0.270502 | 2_4:-14630112 | Msa0317120:three_prime_UTR |
TATTCATTGGAGGGATTTCC+TGG | 0.271367 | 2_4:-14633152 | Msa0317120:CDS |
ACTCAACGTCCTAGAGGTTT+TGG | 0.280151 | 2_4:-14632088 | Msa0317120:CDS |
GATTCTGGTCCTCTTAGTTT+TGG | 0.283274 | 2_4:-14631200 | Msa0317120:CDS |
GGGTCAAAAGCGGTAGGTTA+TGG | 0.288227 | 2_4:-14631365 | Msa0317120:CDS |
CTTCTGGGTTTGTCTTCATT+TGG | 0.305701 | 2_4:-14633727 | Msa0317120:intron |
ATAAATATGTATATATATAA+TGG | 0.307969 | 2_4:+14633864 | None:intergenic |
ACTTCAGAATTAGAGGATTC+TGG | 0.318320 | 2_4:-14631215 | Msa0317120:CDS |
GTAAAATGGTTGAGGTTAAG+AGG | 0.336119 | 2_4:-14631997 | Msa0317120:CDS |
AAGAATTACTTTGATCAATT+CGG | 0.342885 | 2_4:-14632148 | Msa0317120:CDS |
GCTCTAGTGGTGGCCACATT+GGG | 0.352710 | 2_4:-14631142 | Msa0317120:CDS |
GGACTTGGAGATAAATCCTT+TGG | 0.354791 | 2_4:+14631968 | None:intergenic |
ATCAACAACTTCAGAATTAG+AGG | 0.355605 | 2_4:-14631222 | Msa0317120:CDS |
TGTTGCCGAACGCGTTGTTA+TGG | 0.356640 | 2_4:-14633001 | Msa0317120:CDS |
ACTAATCAAGCTGGAACTAT+TGG | 0.362493 | 2_4:-14631440 | Msa0317120:CDS |
TATCATTGAAATGTTCATCT+AGG | 0.374382 | 2_4:-14629984 | Msa0317120:three_prime_UTR |
CTTCACTTCTAACTTTATCA+TGG | 0.381164 | 2_4:-14631714 | Msa0317120:CDS |
AAGAAAGCATCAGAGCTTGC+AGG | 0.383788 | 2_4:+14631539 | None:intergenic |
ACAAGGGATTTACTATATAA+GGG | 0.384052 | 2_4:-14630307 | Msa0317120:three_prime_UTR |
TCGTTAGAGCCAATTGGATT+TGG | 0.391620 | 2_4:-14630364 | Msa0317120:CDS |
AAAATTTCGTTAGAGCCAAT+TGG | 0.396835 | 2_4:-14630370 | Msa0317120:CDS |
GGAACTATTGGCTCTGGTTA+TGG | 0.399080 | 2_4:-14631428 | Msa0317120:CDS |
GGAAGTGAAAATTCAAGTAT+TGG | 0.406692 | 2_4:-14631509 | Msa0317120:CDS |
GACTTGGAGATAAATCCTTT+GGG | 0.412330 | 2_4:+14631969 | None:intergenic |
TTGGAAATATTGGATCGCTT+TGG | 0.415441 | 2_4:-14631481 | Msa0317120:CDS |
AGCAGTCTTAATTATAGGCT+TGG | 0.418041 | 2_4:-14631401 | Msa0317120:CDS |
GTGAAAGTGCAGGGTGGAAA+TGG | 0.418687 | 2_4:-14633187 | Msa0317120:intron |
TCATCGTCCGCTTTCTCAAA+TGG | 0.418816 | 2_4:-14631311 | Msa0317120:CDS |
CCACCTAGCTGACCTCTACT+TGG | 0.422780 | 2_4:+14631947 | None:intergenic |
AATCAGAGTTTGTGGGGTAA+TGG | 0.426835 | 2_4:-14631584 | Msa0317120:CDS |
TAAGTCCATGTCCTCCAATC+AGG | 0.431180 | 2_4:+14631855 | None:intergenic |
AGCTCTAGTGGTGGCCACAT+TGG | 0.433128 | 2_4:-14631143 | Msa0317120:CDS |
ACCATGTTGCTAGTCTTGGC+TGG | 0.436916 | 2_4:-14630075 | Msa0317120:three_prime_UTR |
TTGGACCATGTTGCTAGTCT+TGG | 0.444588 | 2_4:-14630079 | Msa0317120:three_prime_UTR |
AATAGTTCCAGCTTGATTAG+TGG | 0.446759 | 2_4:+14631442 | None:intergenic |
ATTCAACAAATCAGAGTTTG+TGG | 0.447295 | 2_4:-14631592 | Msa0317120:CDS |
TCTGATGCTTTCTTAGGTTA+CGG | 0.449952 | 2_4:-14631530 | Msa0317120:CDS |
CTGCTCGGACTTGCACTGTA+TGG | 0.456091 | 2_4:+14631674 | None:intergenic |
TTCACTTCTAACTTTATCAT+GGG | 0.456159 | 2_4:-14631713 | Msa0317120:CDS |
TCAACACTGCCAAATCCAAT+TGG | 0.469168 | 2_4:+14630355 | None:intergenic |
GGATATAATCCAAGCCTGAT+TGG | 0.471574 | 2_4:-14631869 | Msa0317120:CDS |
AAGTTGTTGATCTCCAAGTA+TGG | 0.472206 | 2_4:+14631234 | None:intergenic |
TTCAGTCCTAGTTATGGGAC+AGG | 0.482898 | 2_4:-14631779 | Msa0317120:CDS |
GACCCGGGGAAGCTATTCAT+TGG | 0.483289 | 2_4:-14633165 | Msa0317120:CDS |
TTGAGTCCTGTCCCATAACT+AGG | 0.486555 | 2_4:+14631773 | None:intergenic |
TACTTCAGGAATTGCTGCTT+AGG | 0.486807 | 2_4:-14630489 | Msa0317120:intron |
CAGCTAGGTGGATTTAGTTA+CGG | 0.489503 | 2_4:-14631935 | Msa0317120:CDS |
CCTCCAATGAATAGCTTCCC+CGG | 0.490387 | 2_4:+14633162 | None:intergenic |
ATAAAATGGCCCAGCTTCAA+AGG | 0.491559 | 2_4:+14631262 | None:intergenic |
CAAGCTGGAACTATTGGCTC+TGG | 0.492504 | 2_4:-14631434 | Msa0317120:CDS |
CTTGTAATCAAGTTATATGA+TGG | 0.496916 | 2_4:-14630237 | Msa0317120:three_prime_UTR |
TCGGTCTTCATTTGTATCCC+AGG | 0.498427 | 2_4:+14633134 | None:intergenic |
CAAATACACAGAGACTTACA+AGG | 0.503790 | 2_4:-14630324 | Msa0317120:three_prime_UTR |
CCTCTTTGGACAAGTAGAGT+TGG | 0.505174 | 2_4:-14630098 | Msa0317120:three_prime_UTR |
CCACTACGGCCAACATTAGC+AGG | 0.505272 | 2_4:+14631812 | None:intergenic |
CCTGCTAATGTTGGCCGTAG+TGG | 0.506110 | 2_4:-14631812 | Msa0317120:CDS |
TGCAGGGTGGAAATGGACCC+GGG | 0.506477 | 2_4:-14633180 | Msa0317120:intron |
TGTTGCTAGTCTTGGCTGGT+TGG | 0.510056 | 2_4:-14630071 | Msa0317120:three_prime_UTR |
ACTTAATGGTAAAATGGTTG+AGG | 0.511412 | 2_4:-14632005 | Msa0317120:CDS |
CCATGTCCTCCAATCAGGCT+TGG | 0.512206 | 2_4:+14631860 | None:intergenic |
CCAAGCCTGATTGGAGGACA+TGG | 0.513321 | 2_4:-14631860 | Msa0317120:CDS |
TTTGCGCATTAAATCTGAAA+CGG | 0.516756 | 2_4:+14631166 | None:intergenic |
ATTTATCTTCTTTCAATCAA+CGG | 0.528092 | 2_4:-14633847 | Msa0317120:five_prime_UTR |
GAAGAAAGAGAGAGGGCGAA+AGG | 0.528675 | 2_4:+14633790 | None:intergenic |
ATAATGAAGGATCGGACCAC+GGG | 0.531988 | 2_4:-14633066 | Msa0317120:CDS |
TTCAACAAATCAGAGTTTGT+GGG | 0.532385 | 2_4:-14631591 | Msa0317120:CDS |
AACACATTCTGATCATCTCT+AGG | 0.536849 | 2_4:+14632277 | None:intergenic |
TCAGGAATTGCTGCTTAGGA+AGG | 0.547622 | 2_4:-14630485 | Msa0317120:intron |
AGAAGCAACAGCAGCAGTCA+TGG | 0.547797 | 2_4:-14632250 | Msa0317120:CDS |
TACGGTACTATGAGTAGAGT+TGG | 0.549591 | 2_4:-14631917 | Msa0317120:CDS |
TATGCTGCTGGTTCAAATGT+TGG | 0.552503 | 2_4:-14631632 | Msa0317120:CDS |
GTGATGAATCCAAAACCTCT+AGG | 0.559445 | 2_4:+14632079 | None:intergenic |
AGCTGACCTCTACTTGGACT+TGG | 0.561555 | 2_4:+14631953 | None:intergenic |
GTTTCGAAGGTGAATGAATG+TGG | 0.562363 | 2_4:-14630436 | Msa0317120:CDS |
TTGTTAGAGATAAAATAAAG+AGG | 0.563764 | 2_4:-14633814 | Msa0317120:five_prime_UTR |
CGGGGAAGCTATTCATTGGA+GGG | 0.568890 | 2_4:-14633161 | Msa0317120:CDS |
TAAAATGGTTGAGGTTAAGA+GGG | 0.571339 | 2_4:-14631996 | Msa0317120:CDS |
TCTGAAAATACTGTCTGAGT+CGG | 0.573282 | 2_4:+14633115 | None:intergenic |
CTCCAATGAATAGCTTCCCC+GGG | 0.574486 | 2_4:+14633163 | None:intergenic |
ACAACGCGTTCGGCAACAGA+AGG | 0.576203 | 2_4:+14633006 | None:intergenic |
GTTGGTACCACTAATCAAGC+TGG | 0.576360 | 2_4:-14631449 | Msa0317120:CDS |
AGTCCAAGTAGAGGTCAGCT+AGG | 0.576395 | 2_4:-14631950 | Msa0317120:CDS |
AAAAGAAAATAAAAGGGAGA+AGG | 0.578745 | 2_4:+14630156 | None:intergenic |
TGTTAGAGATAAAATAAAGA+GGG | 0.579141 | 2_4:-14633813 | Msa0317120:five_prime_UTR |
GTGCAGGGTGGAAATGGACC+CGG | 0.583174 | 2_4:-14633181 | Msa0317120:intron |
ATAATTGCCATTTGAGAAAG+CGG | 0.584456 | 2_4:+14631304 | None:intergenic |
AATGCCATGGCATATGCTGC+TGG | 0.585801 | 2_4:-14631644 | Msa0317120:CDS |
GTGCGTATAGGAGTAGGAGC+AGG | 0.586075 | 2_4:+14632223 | None:intergenic |
ATTCATTGGAGGGATTTCCT+GGG | 0.590560 | 2_4:-14633151 | Msa0317120:CDS |
ACACATTCTGATCATCTCTA+GGG | 0.591583 | 2_4:+14632278 | None:intergenic |
GATGCTAGCTTGTGTTTCGA+AGG | 0.591604 | 2_4:-14630449 | Msa0317120:CDS |
GGTTAAGAGGGCTGTCCCAA+AGG | 0.591792 | 2_4:-14631984 | Msa0317120:CDS |
ATGGCATTATTGTATCTGCT+CGG | 0.593063 | 2_4:+14631659 | None:intergenic |
CCGGGGAAGCTATTCATTGG+AGG | 0.593790 | 2_4:-14633162 | Msa0317120:CDS |
GGACATGGACTTAGATTAGA+CGG | 0.596148 | 2_4:-14631845 | Msa0317120:CDS |
AGATTGAGTCCTGCTAATGT+TGG | 0.596495 | 2_4:-14631821 | Msa0317120:CDS |
ATTCATCACATATGATTCTG+AGG | 0.596540 | 2_4:-14632065 | Msa0317120:CDS |
CGGACCACGGGACGTGCTCG+TGG | 0.598613 | 2_4:-14633054 | Msa0317120:CDS |
TCGCTTTGGAGTACCTCTGT+TGG | 0.598671 | 2_4:-14631467 | Msa0317120:CDS |
TATAATCCAAGCCTGATTGG+AGG | 0.599267 | 2_4:-14631866 | Msa0317120:CDS |
CTCAAATGGCAATTATGGCG+AGG | 0.603967 | 2_4:-14631297 | Msa0317120:CDS |
AAGCTGTGATAATGAAGGAT+CGG | 0.604188 | 2_4:-14633074 | Msa0317120:CDS |
AGCATAAGAAGAAAGAGAGA+GGG | 0.604499 | 2_4:+14633783 | None:intergenic |
TCAACAAATCAGAGTTTGTG+GGG | 0.606068 | 2_4:-14631590 | Msa0317120:CDS |
AGAAAGCATCAGAGCTTGCA+GGG | 0.614536 | 2_4:+14631540 | None:intergenic |
TTGTCTATTAGCAACAGCAT+AGG | 0.615183 | 2_4:+14631118 | None:intergenic |
TTAATGCGCAAAAGCTCTAG+TGG | 0.619120 | 2_4:-14631155 | Msa0317120:CDS |
CCAAGTAGAGGTCAGCTAGG+TGG | 0.624464 | 2_4:-14631947 | Msa0317120:CDS |
AAGCATAAGAAGAAAGAGAG+AGG | 0.633966 | 2_4:+14633782 | None:intergenic |
AAAACCACGAGCACGTCCCG+TGG | 0.635104 | 2_4:+14633050 | None:intergenic |
CCAACTCTACTTGTCCAAAG+AGG | 0.637536 | 2_4:+14630098 | None:intergenic |
CTCTAGTGGTGGCCACATTG+GGG | 0.638379 | 2_4:-14631141 | Msa0317120:CDS |
ACACAAGCTAGCATCATACA+TGG | 0.641732 | 2_4:+14630457 | None:intergenic |
AAAATCACTCTCAGTAACTG+TGG | 0.644212 | 2_4:+14632171 | None:intergenic |
TGAACCAGCAGCATATGCCA+TGG | 0.649924 | 2_4:+14631640 | None:intergenic |
AGTTGAAGCTGTGATAATGA+AGG | 0.651982 | 2_4:-14633079 | Msa0317120:CDS |
GATAATGAAGGATCGGACCA+CGG | 0.652237 | 2_4:-14633067 | Msa0317120:CDS |
CATAACACTCAACGTCCTAG+AGG | 0.655325 | 2_4:-14632094 | Msa0317120:CDS |
TTGATTAGTGGTACCAACAG+AGG | 0.658357 | 2_4:+14631454 | None:intergenic |
TTATCTCCAAGTCCAAGTAG+AGG | 0.662062 | 2_4:-14631959 | Msa0317120:CDS |
ACCAGCCAAGACTAGCAACA+TGG | 0.663647 | 2_4:+14630074 | None:intergenic |
TGAAAAGAGAATATCCACTA+CGG | 0.670066 | 2_4:+14631798 | None:intergenic |
GAGCAGATACAATAATGCCA+TGG | 0.672280 | 2_4:-14631657 | Msa0317120:CDS |
ATGCGCAAAAGCTCTAGTGG+TGG | 0.680889 | 2_4:-14631152 | Msa0317120:CDS |
TGTATGGAGAACTCAATGCA+CGG | 0.691238 | 2_4:+14631690 | None:intergenic |
GCAGGGTGGAAATGGACCCG+GGG | 0.704063 | 2_4:-14633179 | Msa0317120:intron |
AAATACACAGAGACTTACAA+GGG | 0.709229 | 2_4:-14630323 | Msa0317120:three_prime_UTR |
CAACAGCATAGGCCCCAATG+TGG | 0.722323 | 2_4:+14631129 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTCAATTTTGAATTAT+GGG | - | chr2_4:14630162-14630181 | Msa0317120:three_prime_UTR | 10.0% |
!! | GACATAATTATAAATAAAAA+GGG | + | chr2_4:14631456-14631475 | None:intergenic | 10.0% |
!! | AGACATAATTATAAATAAAA+AGG | + | chr2_4:14631457-14631476 | None:intergenic | 10.0% |
!! | AAAAACAAAAGAAAATAAAA+GGG | + | chr2_4:14633674-14633693 | None:intergenic | 10.0% |
!!! | CTTTTTTCAATTTTGAATTA+TGG | - | chr2_4:14630161-14630180 | Msa0317120:three_prime_UTR | 15.0% |
!! | AAAACAAAATTTACTGAATT+GGG | + | chr2_4:14630220-14630239 | None:intergenic | 15.0% |
!! | AAAAACAAAATTTACTGAAT+TGG | + | chr2_4:14630221-14630240 | None:intergenic | 15.0% |
!!! | TTAGATTTTATACTTGATTA+TGG | - | chr2_4:14632803-14632822 | Msa0317120:intron | 15.0% |
!! | GTGAATATAAAAGAAAAATA+TGG | + | chr2_4:14632863-14632882 | None:intergenic | 15.0% |
!! | CAAAAACAAAAGAAAATAAA+AGG | + | chr2_4:14633675-14633694 | None:intergenic | 15.0% |
!! | ATTTATCTTCTTTCAATCAA+CGG | - | chr2_4:14629974-14629993 | Msa0317120:three_prime_UTR | 20.0% |
!! | TTGTTAGAGATAAAATAAAG+AGG | - | chr2_4:14630007-14630026 | Msa0317120:three_prime_UTR | 20.0% |
!! | TGTTAGAGATAAAATAAAGA+GGG | - | chr2_4:14630008-14630027 | Msa0317120:three_prime_UTR | 20.0% |
!! | TTGATGAATTTAATGTTGTT+TGG | - | chr2_4:14630366-14630385 | Msa0317120:CDS | 20.0% |
!!! | TTAATGTTGTTTGGATTTAT+AGG | - | chr2_4:14630375-14630394 | Msa0317120:CDS | 20.0% |
!!! | TTTATGGATGTGAATTTTTA+TGG | - | chr2_4:14630584-14630603 | Msa0317120:intron | 20.0% |
!! | GAAAAATACACATACAATAT+CGG | - | chr2_4:14631019-14631038 | Msa0317120:intron | 20.0% |
!! | AAGAATTACTTTGATCAATT+CGG | - | chr2_4:14631673-14631692 | Msa0317120:CDS | 20.0% |
!!! | TGAAGTTTTCATTTTCATTA+TGG | + | chr2_4:14632092-14632111 | None:intergenic | 20.0% |
!! | AATAATCAATCATATGGAAA+TGG | + | chr2_4:14633223-14633242 | None:intergenic | 20.0% |
!!! | TTCCATATGATTGATTATTT+TGG | - | chr2_4:14633224-14633243 | Msa0317120:intron | 20.0% |
!! | ATCCAAAATAATCAATCATA+TGG | + | chr2_4:14633229-14633248 | None:intergenic | 20.0% |
!!! | AATTATAGGTTTTCTTTCTT+TGG | - | chr2_4:14633551-14633570 | Msa0317120:intron | 20.0% |
!!! | ATTATAGGTTTTCTTTCTTT+GGG | - | chr2_4:14633552-14633571 | Msa0317120:intron | 20.0% |
!! | TTTCTTCAAATTTTCTCTTC+TGG | - | chr2_4:14630078-14630097 | Msa0317120:three_prime_UTR | 25.0% |
!! | TTCTTCAAATTTTCTCTTCT+GGG | - | chr2_4:14630079-14630098 | Msa0317120:three_prime_UTR | 25.0% |
! | TTGACAAAAGTCATAGAATT+AGG | + | chr2_4:14630132-14630151 | None:intergenic | 25.0% |
!! | TTCAATTTTGAATTATGGGT+TGG | - | chr2_4:14630166-14630185 | Msa0317120:three_prime_UTR | 25.0% |
! | TGTCTGAAAAAACATAGATT+TGG | - | chr2_4:14630276-14630295 | Msa0317120:three_prime_UTR | 25.0% |
!!! | GATTTTGATGTTACTACTTT+TGG | - | chr2_4:14630498-14630517 | Msa0317120:intron | 25.0% |
!!! | GTTAGAAGTAGAATTTTGAT+TGG | - | chr2_4:14630606-14630625 | Msa0317120:intron | 25.0% |
! | GATTTAATATTGCAAGTTCA+TGG | - | chr2_4:14631124-14631143 | Msa0317120:intron | 25.0% |
! | AGAAACACAAATAATGTACT+TGG | + | chr2_4:14631396-14631415 | None:intergenic | 25.0% |
! | AAAGGGAATTATAGAAATCA+AGG | + | chr2_4:14631439-14631458 | None:intergenic | 25.0% |
!!! | AATATCTTTTTTGTGCGTAT+AGG | + | chr2_4:14631613-14631632 | None:intergenic | 25.0% |
!! | ACAAAAAAGATATTTGTTGG+AGG | - | chr2_4:14631619-14631638 | Msa0317120:CDS | 25.0% |
!! | AAAACTTTTCACGAACTTAA+TGG | - | chr2_4:14631802-14631821 | Msa0317120:CDS | 25.0% |
!! | TCATTTTCATTATGGTTCAA+TGG | + | chr2_4:14632084-14632103 | None:intergenic | 25.0% |
! | TTCACTTCTAACTTTATCAT+GGG | - | chr2_4:14632108-14632127 | Msa0317120:CDS | 25.0% |
!!! | ACTCTGATTTGTTGAATTTA+TGG | + | chr2_4:14632226-14632245 | None:intergenic | 25.0% |
!!! | AATTCAAGTATTGGTTCATT+TGG | - | chr2_4:14632321-14632340 | Msa0317120:intron | 25.0% |
!! | ATTGGTTCATTTGGAAATAT+TGG | - | chr2_4:14632330-14632349 | Msa0317120:intron | 25.0% |
! | GTAAAAGCAGTCTTAATTAT+AGG | - | chr2_4:14632415-14632434 | Msa0317120:intron | 25.0% |
!!! | TATAAAAATACCTTTGAAGC+TGG | - | chr2_4:14632549-14632568 | Msa0317120:intron | 25.0% |
!!! | ATAAAAATACCTTTGAAGCT+GGG | - | chr2_4:14632550-14632569 | Msa0317120:intron | 25.0% |
!!! | ATATCATTTTTCCAAAATGC+TGG | - | chr2_4:14632977-14632996 | Msa0317120:CDS | 25.0% |
! | CATGGCTATAATTTATTCAT+TGG | + | chr2_4:14633004-14633023 | None:intergenic | 25.0% |
! | TTTACTTGAATCAGAAAGTA+TGG | - | chr2_4:14633266-14633285 | Msa0317120:intron | 25.0% |
! | AAAAACACATTAATACATGC+AGG | + | chr2_4:14633302-14633321 | None:intergenic | 25.0% |
! | TACAAGGGATTTACTATATA+AGG | - | chr2_4:14633513-14633532 | Msa0317120:intron | 25.0% |
! | ACAAGGGATTTACTATATAA+GGG | - | chr2_4:14633514-14633533 | Msa0317120:intron | 25.0% |
! | CTTGTAATCAAGTTATATGA+TGG | - | chr2_4:14633584-14633603 | Msa0317120:intron | 25.0% |
! | AAAAGAAAATAAAAGGGAGA+AGG | + | chr2_4:14633668-14633687 | None:intergenic | 25.0% |
! | TATCATTGAAATGTTCATCT+AGG | - | chr2_4:14633837-14633856 | Msa0317120:five_prime_UTR | 25.0% |
!! | ATGAATCAGCTAACATTTTA+AGG | + | chr2_4:14633865-14633884 | None:intergenic | 25.0% |
GTATCATGTATGTAACTGAT+TGG | - | chr2_4:14630433-14630452 | Msa0317120:CDS | 30.0% | |
GTATGTAACTGATTGGAATT+TGG | - | chr2_4:14630440-14630459 | Msa0317120:CDS | 30.0% | |
ACAAAAACATCTGACATCAT+CGG | + | chr2_4:14630468-14630487 | None:intergenic | 30.0% | |
!! | GATGTTACTACTTTTGGTAT+TGG | - | chr2_4:14630504-14630523 | Msa0317120:intron | 30.0% |
! | AGACAGTATTTTCAGAACTT+TGG | - | chr2_4:14630713-14630732 | Msa0317120:intron | 30.0% |
ATGGAAAAACATGTCATAGA+TGG | - | chr2_4:14630839-14630858 | Msa0317120:intron | 30.0% | |
AAGCAATTGTAAAGTGTAGT+TGG | - | chr2_4:14631184-14631203 | Msa0317120:CDS | 30.0% | |
AATTGATGCTTGAGATGTTA+AGG | - | chr2_4:14631232-14631251 | Msa0317120:CDS | 30.0% | |
! | ATCAGAATTATTTAGAGCAC+TGG | + | chr2_4:14631332-14631351 | None:intergenic | 30.0% |
CTAAATAATTCTGATCTGCT+AGG | - | chr2_4:14631337-14631356 | Msa0317120:CDS | 30.0% | |
CGCACAAAAAAGATATTTGT+TGG | - | chr2_4:14631616-14631635 | Msa0317120:CDS | 30.0% | |
ATTCATCACATATGATTCTG+AGG | - | chr2_4:14631756-14631775 | Msa0317120:CDS | 30.0% | |
TCACGAACTTAATGGTAAAA+TGG | - | chr2_4:14631810-14631829 | Msa0317120:CDS | 30.0% | |
ACTTAATGGTAAAATGGTTG+AGG | - | chr2_4:14631816-14631835 | Msa0317120:CDS | 30.0% | |
TAAAATGGTTGAGGTTAAGA+GGG | - | chr2_4:14631825-14631844 | Msa0317120:CDS | 30.0% | |
!!! | AGAGTTGGTAGTTTTTCTAA+TGG | - | chr2_4:14631919-14631938 | Msa0317120:CDS | 30.0% |
!! | TTTTTCTAATGGTTTTGCTC+AGG | - | chr2_4:14631930-14631949 | Msa0317120:CDS | 30.0% |
!! | TTTTCTAATGGTTTTGCTCA+GGG | - | chr2_4:14631931-14631950 | Msa0317120:CDS | 30.0% |
TGAAAAGAGAATATCCACTA+CGG | + | chr2_4:14632026-14632045 | None:intergenic | 30.0% | |
! | TTTTCATTATGGTTCAATGG+TGG | + | chr2_4:14632081-14632100 | None:intergenic | 30.0% |
CTTCACTTCTAACTTTATCA+TGG | - | chr2_4:14632107-14632126 | Msa0317120:CDS | 30.0% | |
ATTCAACAAATCAGAGTTTG+TGG | - | chr2_4:14632229-14632248 | Msa0317120:CDS | 30.0% | |
TTCAACAAATCAGAGTTTGT+GGG | - | chr2_4:14632230-14632249 | Msa0317120:CDS | 30.0% | |
GGAAGTGAAAATTCAAGTAT+TGG | - | chr2_4:14632312-14632331 | Msa0317120:intron | 30.0% | |
! | ATAATTGCCATTTGAGAAAG+CGG | + | chr2_4:14632520-14632539 | None:intergenic | 30.0% |
! | CAAGTATGGTCTTGATAAAA+TGG | + | chr2_4:14632576-14632595 | None:intergenic | 30.0% |
! | CATTTTATCAAGACCATACT+TGG | - | chr2_4:14632574-14632593 | Msa0317120:intron | 30.0% |
ATCAACAACTTCAGAATTAG+AGG | - | chr2_4:14632599-14632618 | Msa0317120:intron | 30.0% | |
TTTGCGCATTAAATCTGAAA+CGG | + | chr2_4:14632658-14632677 | None:intergenic | 30.0% | |
CTCAAATTATGGTCATAACA+TGG | + | chr2_4:14633022-14633041 | None:intergenic | 30.0% | |
AGATACACCTTACTATGAAA+AGG | - | chr2_4:14633146-14633165 | Msa0317120:CDS | 30.0% | |
GATACACCTTACTATGAAAA+GGG | - | chr2_4:14633147-14633166 | Msa0317120:CDS | 30.0% | |
ATACACCTTACTATGAAAAG+GGG | - | chr2_4:14633148-14633167 | Msa0317120:CDS | 30.0% | |
! | TTTTGACCATGTTTTACTTC+AGG | - | chr2_4:14633318-14633337 | Msa0317120:intron | 30.0% |
AAAATTTCGTTAGAGCCAAT+TGG | - | chr2_4:14633451-14633470 | Msa0317120:intron | 30.0% | |
AAATACACAGAGACTTACAA+GGG | - | chr2_4:14633498-14633517 | Msa0317120:intron | 30.0% | |
!! | TTGAGTTGAGTGTGAATTAT+AGG | - | chr2_4:14633537-14633556 | Msa0317120:intron | 30.0% |
TTCAAACTGTTATTCCTCTT+TGG | - | chr2_4:14633709-14633728 | Msa0317120:intron | 30.0% | |
AGCATAAGAAGAAAGAGAGA+GGG | + | chr2_4:14630041-14630060 | None:intergenic | 35.0% | |
AAGCATAAGAAGAAAGAGAG+AGG | + | chr2_4:14630042-14630061 | None:intergenic | 35.0% | |
!! | ACTGAATTGGGTTAGTTTGA+TGG | + | chr2_4:14630208-14630227 | None:intergenic | 35.0% |
ATTTATAGGACACAGATACG+AGG | - | chr2_4:14630389-14630408 | Msa0317120:CDS | 35.0% | |
!! | TACGAGGTTTTGTGTTTGTT+TGG | - | chr2_4:14630405-14630424 | Msa0317120:CDS | 35.0% |
!! | TGGTTTGTTGCAATGATTGT+TGG | - | chr2_4:14630524-14630543 | Msa0317120:intron | 35.0% |
! | ATTGGATTATGTGAAAGTGC+AGG | - | chr2_4:14630624-14630643 | Msa0317120:intron | 35.0% |
! | TTGGATTATGTGAAAGTGCA+GGG | - | chr2_4:14630625-14630644 | Msa0317120:intron | 35.0% |
TCTGAAAATACTGTCTGAGT+CGG | + | chr2_4:14630709-14630728 | None:intergenic | 35.0% | |
! | AGTTGAAGCTGTGATAATGA+AGG | - | chr2_4:14630742-14630761 | Msa0317120:intron | 35.0% |
! | AAGCTGTGATAATGAAGGAT+CGG | - | chr2_4:14630747-14630766 | Msa0317120:intron | 35.0% |
! | TTTTTCCATAACAACGCGTT+CGG | + | chr2_4:14630828-14630847 | None:intergenic | 35.0% |
! | CAACTTCAGTTTAGAACAAG+AGG | - | chr2_4:14630992-14631011 | Msa0317120:intron | 35.0% |
TTGTCATGCATTTAACATGC+AGG | - | chr2_4:14631501-14631520 | Msa0317120:CDS | 35.0% | |
ACACATTCTGATCATCTCTA+GGG | + | chr2_4:14631546-14631565 | None:intergenic | 35.0% | |
AACACATTCTGATCATCTCT+AGG | + | chr2_4:14631547-14631566 | None:intergenic | 35.0% | |
!!! | TTTTTTGTGCGTATAGGAGT+AGG | + | chr2_4:14631607-14631626 | None:intergenic | 35.0% |
AAAATCACTCTCAGTAACTG+TGG | + | chr2_4:14631653-14631672 | None:intergenic | 35.0% | |
GTAAAATGGTTGAGGTTAAG+AGG | - | chr2_4:14631824-14631843 | Msa0317120:CDS | 35.0% | |
GACTTGGAGATAAATCCTTT+GGG | + | chr2_4:14631855-14631874 | None:intergenic | 35.0% | |
! | TCTCTTTTCAGTCCTAGTTA+TGG | - | chr2_4:14632036-14632055 | Msa0317120:CDS | 35.0% |
! | CTCTTTTCAGTCCTAGTTAT+GGG | - | chr2_4:14632037-14632056 | Msa0317120:CDS | 35.0% |
ATGGCATTATTGTATCTGCT+CGG | + | chr2_4:14632165-14632184 | None:intergenic | 35.0% | |
TCAACAAATCAGAGTTTGTG+GGG | - | chr2_4:14632231-14632250 | Msa0317120:CDS | 35.0% | |
TCTGATGCTTTCTTAGGTTA+CGG | - | chr2_4:14632291-14632310 | Msa0317120:CDS | 35.0% | |
TTGGAAATATTGGATCGCTT+TGG | - | chr2_4:14632340-14632359 | Msa0317120:intron | 35.0% | |
AATAGTTCCAGCTTGATTAG+TGG | + | chr2_4:14632382-14632401 | None:intergenic | 35.0% | |
ACTAATCAAGCTGGAACTAT+TGG | - | chr2_4:14632381-14632400 | Msa0317120:intron | 35.0% | |
AGCAGTCTTAATTATAGGCT+TGG | - | chr2_4:14632420-14632439 | Msa0317120:intron | 35.0% | |
!!! | TGTGATTTTAGGGTCAAAAG+CGG | - | chr2_4:14632446-14632465 | Msa0317120:intron | 35.0% |
GCTTTCTCAAATGGCAATTA+TGG | - | chr2_4:14632519-14632538 | Msa0317120:intron | 35.0% | |
AAGTTGTTGATCTCCAAGTA+TGG | + | chr2_4:14632590-14632609 | None:intergenic | 35.0% | |
ACTTCAGAATTAGAGGATTC+TGG | - | chr2_4:14632606-14632625 | Msa0317120:intron | 35.0% | |
!! | TTTTCAAGGCCAAAACTAAG+AGG | + | chr2_4:14632633-14632652 | None:intergenic | 35.0% |
!! | AATCTGAAACGGCATTTTCA+AGG | + | chr2_4:14632647-14632666 | None:intergenic | 35.0% |
TTGTCTATTAGCAACAGCAT+AGG | + | chr2_4:14632706-14632725 | None:intergenic | 35.0% | |
GCTAATAGACAATCAAACAG+AGG | - | chr2_4:14632714-14632733 | Msa0317120:intron | 35.0% | |
GTATTGTTGACAAGACTCTA+AGG | + | chr2_4:14632903-14632922 | None:intergenic | 35.0% | |
! | TATTCATTGGACCAGCATTT+TGG | + | chr2_4:14632991-14633010 | None:intergenic | 35.0% |
! | TTTCTCCCCTTTTCATAGTA+AGG | + | chr2_4:14633156-14633175 | None:intergenic | 35.0% |
GCAATTCCTGAAGTAAAACA+TGG | + | chr2_4:14633327-14633346 | None:intergenic | 35.0% | |
CAAATACACAGAGACTTACA+AGG | - | chr2_4:14633497-14633516 | Msa0317120:intron | 35.0% | |
GTGTATTACTTTGTCATGAG+AGG | + | chr2_4:14633633-14633652 | None:intergenic | 35.0% | |
CTTCTGGGTTTGTCTTCATT+TGG | - | chr2_4:14630094-14630113 | Msa0317120:three_prime_UTR | 40.0% | |
TATTCATTGGAGGGATTTCC+TGG | - | chr2_4:14630669-14630688 | Msa0317120:intron | 40.0% | |
ATTCATTGGAGGGATTTCCT+GGG | - | chr2_4:14630670-14630689 | Msa0317120:intron | 40.0% | |
TTATGATTCATTGTCCCCCA+CGG | - | chr2_4:14630935-14630954 | Msa0317120:intron | 40.0% | |
TGCATCTCAATCATTTCCGT+GGG | + | chr2_4:14630954-14630973 | None:intergenic | 40.0% | |
ATGCATCTCAATCATTTCCG+TGG | + | chr2_4:14630955-14630974 | None:intergenic | 40.0% | |
GTTGGCATGAATGATAGCAA+TGG | - | chr2_4:14631202-14631221 | Msa0317120:CDS | 40.0% | |
GTGATGAATCCAAAACCTCT+AGG | + | chr2_4:14631745-14631764 | None:intergenic | 40.0% | |
GGACTTGGAGATAAATCCTT+TGG | + | chr2_4:14631856-14631875 | None:intergenic | 40.0% | |
TTATCTCCAAGTCCAAGTAG+AGG | - | chr2_4:14631862-14631881 | Msa0317120:CDS | 40.0% | |
! | CAGCTAGGTGGATTTAGTTA+CGG | - | chr2_4:14631886-14631905 | Msa0317120:CDS | 40.0% |
TACGGTACTATGAGTAGAGT+TGG | - | chr2_4:14631904-14631923 | Msa0317120:CDS | 40.0% | |
GGATATAATCCAAGCCTGAT+TGG | - | chr2_4:14631952-14631971 | Msa0317120:CDS | 40.0% | |
TATAATCCAAGCCTGATTGG+AGG | - | chr2_4:14631955-14631974 | Msa0317120:CDS | 40.0% | |
GGACATGGACTTAGATTAGA+CGG | - | chr2_4:14631976-14631995 | Msa0317120:CDS | 40.0% | |
AGATTGAGTCCTGCTAATGT+TGG | - | chr2_4:14632000-14632019 | Msa0317120:CDS | 40.0% | |
TGTATGGAGAACTCAATGCA+CGG | + | chr2_4:14632134-14632153 | None:intergenic | 40.0% | |
GAGCAGATACAATAATGCCA+TGG | - | chr2_4:14632164-14632183 | Msa0317120:CDS | 40.0% | |
!! | TATGCTGCTGGTTCAAATGT+TGG | - | chr2_4:14632189-14632208 | Msa0317120:CDS | 40.0% |
AATCAGAGTTTGTGGGGTAA+TGG | - | chr2_4:14632237-14632256 | Msa0317120:CDS | 40.0% | |
TTGATTAGTGGTACCAACAG+AGG | + | chr2_4:14632370-14632389 | None:intergenic | 40.0% | |
! | AGGCTTGGAGATGTGATTTT+AGG | - | chr2_4:14632435-14632454 | Msa0317120:intron | 40.0% |
! | GGCTTGGAGATGTGATTTTA+GGG | - | chr2_4:14632436-14632455 | Msa0317120:intron | 40.0% |
!!! | ATTTTAGGGTCAAAAGCGGT+AGG | - | chr2_4:14632450-14632469 | Msa0317120:intron | 40.0% |
ATAAAATGGCCCAGCTTCAA+AGG | + | chr2_4:14632562-14632581 | None:intergenic | 40.0% | |
! | GATTCTGGTCCTCTTAGTTT+TGG | - | chr2_4:14632621-14632640 | Msa0317120:intron | 40.0% |
! | TTAATGCGCAAAAGCTCTAG+TGG | - | chr2_4:14632666-14632685 | Msa0317120:intron | 40.0% |
GCTCAGACACACTCAAATTA+TGG | + | chr2_4:14633033-14633052 | None:intergenic | 40.0% | |
! | TACTTCAGGAATTGCTGCTT+AGG | - | chr2_4:14633332-14633351 | Msa0317120:intron | 40.0% |
ACACAAGCTAGCATCATACA+TGG | + | chr2_4:14633367-14633386 | None:intergenic | 40.0% | |
GTTTCGAAGGTGAATGAATG+TGG | - | chr2_4:14633385-14633404 | Msa0317120:intron | 40.0% | |
TCGTTAGAGCCAATTGGATT+TGG | - | chr2_4:14633457-14633476 | Msa0317120:intron | 40.0% | |
TCAACACTGCCAAATCCAAT+TGG | + | chr2_4:14633469-14633488 | None:intergenic | 40.0% | |
! | GATTATGTGAAAGTGCAGGG+TGG | - | chr2_4:14630628-14630647 | Msa0317120:intron | 45.0% |
TCGGTCTTCATTTGTATCCC+AGG | + | chr2_4:14630690-14630709 | None:intergenic | 45.0% | |
GATAATGAAGGATCGGACCA+CGG | - | chr2_4:14630754-14630773 | Msa0317120:intron | 45.0% | |
ATAATGAAGGATCGGACCAC+GGG | - | chr2_4:14630755-14630774 | Msa0317120:intron | 45.0% | |
CATCTCAATCATTTCCGTGG+GGG | + | chr2_4:14630952-14630971 | None:intergenic | 45.0% | |
GCATCTCAATCATTTCCGTG+GGG | + | chr2_4:14630953-14630972 | None:intergenic | 45.0% | |
GTTTCTCTCTCACTCTCACA+TGG | - | chr2_4:14631410-14631429 | Msa0317120:CDS | 45.0% | |
CATAACACTCAACGTCCTAG+AGG | - | chr2_4:14631727-14631746 | Msa0317120:CDS | 45.0% | |
! | ACTCAACGTCCTAGAGGTTT+TGG | - | chr2_4:14631733-14631752 | Msa0317120:CDS | 45.0% |
TAAGTCCATGTCCTCCAATC+AGG | + | chr2_4:14631969-14631988 | None:intergenic | 45.0% | |
TTCAGTCCTAGTTATGGGAC+AGG | - | chr2_4:14632042-14632061 | Msa0317120:CDS | 45.0% | |
TTGAGTCCTGTCCCATAACT+AGG | + | chr2_4:14632051-14632070 | None:intergenic | 45.0% | |
!! | AGAAAGCATCAGAGCTTGCA+GGG | + | chr2_4:14632284-14632303 | None:intergenic | 45.0% |
!! | AAGAAAGCATCAGAGCTTGC+AGG | + | chr2_4:14632285-14632304 | None:intergenic | 45.0% |
! | GCAAGCTCTGATGCTTTCTT+AGG | - | chr2_4:14632285-14632304 | Msa0317120:CDS | 45.0% |
GTTGGTACCACTAATCAAGC+TGG | - | chr2_4:14632372-14632391 | Msa0317120:intron | 45.0% | |
!! | GGAACTATTGGCTCTGGTTA+TGG | - | chr2_4:14632393-14632412 | Msa0317120:intron | 45.0% |
TCATCGTCCGCTTTCTCAAA+TGG | - | chr2_4:14632510-14632529 | Msa0317120:intron | 45.0% | |
CTCAAATGGCAATTATGGCG+AGG | - | chr2_4:14632524-14632543 | Msa0317120:intron | 45.0% | |
ATACCAGTGTGTGCGAAATG+CGG | - | chr2_4:14632919-14632938 | Msa0317120:intron | 45.0% | |
ATTTGAGTGTGTCTGAGCAC+AGG | - | chr2_4:14633035-14633054 | Msa0317120:CDS | 45.0% | |
! | TCAGGAATTGCTGCTTAGGA+AGG | - | chr2_4:14633336-14633355 | Msa0317120:intron | 45.0% |
! | GATGCTAGCTTGTGTTTCGA+AGG | - | chr2_4:14633372-14633391 | Msa0317120:intron | 45.0% |
CCAACTCTACTTGTCCAAAG+AGG | + | chr2_4:14633726-14633745 | None:intergenic | 45.0% | |
CCTCTTTGGACAAGTAGAGT+TGG | - | chr2_4:14633723-14633742 | Msa0317120:intron | 45.0% | |
! | TTGGACCATGTTGCTAGTCT+TGG | - | chr2_4:14633742-14633761 | Msa0317120:five_prime_UTR | 45.0% |
!! | ATAAATATGTATATATATAA+TGG | + | chr2_4:14629960-14629979 | None:intergenic | 5.0% |
!!! | TTTTTAAAGATTTTATTTTA+TGG | - | chr2_4:14630568-14630587 | Msa0317120:intron | 5.0% |
GAAGAAAGAGAGAGGGCGAA+AGG | + | chr2_4:14630034-14630053 | None:intergenic | 50.0% | |
! | GTGAAAGTGCAGGGTGGAAA+TGG | - | chr2_4:14630634-14630653 | Msa0317120:intron | 50.0% |
CTCCAATGAATAGCTTCCCC+GGG | + | chr2_4:14630661-14630680 | None:intergenic | 50.0% | |
CCTCCAATGAATAGCTTCCC+CGG | + | chr2_4:14630662-14630681 | None:intergenic | 50.0% | |
CGGGGAAGCTATTCATTGGA+GGG | - | chr2_4:14630660-14630679 | Msa0317120:intron | 50.0% | |
TGTTGCCGAACGCGTTGTTA+TGG | - | chr2_4:14630820-14630839 | Msa0317120:intron | 50.0% | |
AGAAGCAACAGCAGCAGTCA+TGG | - | chr2_4:14631571-14631590 | Msa0317120:CDS | 50.0% | |
AGCTGACCTCTACTTGGACT+TGG | + | chr2_4:14631871-14631890 | None:intergenic | 50.0% | |
AGTCCAAGTAGAGGTCAGCT+AGG | - | chr2_4:14631871-14631890 | Msa0317120:CDS | 50.0% | |
AATGCCATGGCATATGCTGC+TGG | - | chr2_4:14632177-14632196 | Msa0317120:CDS | 50.0% | |
TGAACCAGCAGCATATGCCA+TGG | + | chr2_4:14632184-14632203 | None:intergenic | 50.0% | |
!! | TCGCTTTGGAGTACCTCTGT+TGG | - | chr2_4:14632354-14632373 | Msa0317120:intron | 50.0% |
!! | CAAGCTGGAACTATTGGCTC+TGG | - | chr2_4:14632387-14632406 | Msa0317120:intron | 50.0% |
GGGTCAAAAGCGGTAGGTTA+TGG | - | chr2_4:14632456-14632475 | Msa0317120:intron | 50.0% | |
! | ATGCGCAAAAGCTCTAGTGG+TGG | - | chr2_4:14632669-14632688 | Msa0317120:intron | 50.0% |
TATCCGCATTTCGCACACAC+TGG | + | chr2_4:14632925-14632944 | None:intergenic | 50.0% | |
!! | ACCATGTTGCTAGTCTTGGC+TGG | - | chr2_4:14633746-14633765 | Msa0317120:five_prime_UTR | 50.0% |
ACCAGCCAAGACTAGCAACA+TGG | + | chr2_4:14633750-14633769 | None:intergenic | 50.0% | |
!! | TGTTGCTAGTCTTGGCTGGT+TGG | - | chr2_4:14633750-14633769 | Msa0317120:five_prime_UTR | 50.0% |
GACCCGGGGAAGCTATTCAT+TGG | - | chr2_4:14630656-14630675 | Msa0317120:intron | 55.0% | |
CCGGGGAAGCTATTCATTGG+AGG | - | chr2_4:14630659-14630678 | Msa0317120:intron | 55.0% | |
ACAACGCGTTCGGCAACAGA+AGG | + | chr2_4:14630818-14630837 | None:intergenic | 55.0% | |
GTGCGTATAGGAGTAGGAGC+AGG | + | chr2_4:14631601-14631620 | None:intergenic | 55.0% | |
GGTTAAGAGGGCTGTCCCAA+AGG | - | chr2_4:14631837-14631856 | Msa0317120:CDS | 55.0% | |
CCACCTAGCTGACCTCTACT+TGG | + | chr2_4:14631877-14631896 | None:intergenic | 55.0% | |
CCAAGTAGAGGTCAGCTAGG+TGG | - | chr2_4:14631874-14631893 | Msa0317120:CDS | 55.0% | |
CCATGTCCTCCAATCAGGCT+TGG | + | chr2_4:14631964-14631983 | None:intergenic | 55.0% | |
CCAAGCCTGATTGGAGGACA+TGG | - | chr2_4:14631961-14631980 | Msa0317120:CDS | 55.0% | |
CCACTACGGCCAACATTAGC+AGG | + | chr2_4:14632012-14632031 | None:intergenic | 55.0% | |
CCTGCTAATGTTGGCCGTAG+TGG | - | chr2_4:14632009-14632028 | Msa0317120:CDS | 55.0% | |
CTGCTCGGACTTGCACTGTA+TGG | + | chr2_4:14632150-14632169 | None:intergenic | 55.0% | |
! | AGCTCTAGTGGTGGCCACAT+TGG | - | chr2_4:14632678-14632697 | Msa0317120:intron | 55.0% |
GCTCTAGTGGTGGCCACATT+GGG | - | chr2_4:14632679-14632698 | Msa0317120:intron | 55.0% | |
CTCTAGTGGTGGCCACATTG+GGG | - | chr2_4:14632680-14632699 | Msa0317120:intron | 55.0% | |
CAACAGCATAGGCCCCAATG+TGG | + | chr2_4:14632695-14632714 | None:intergenic | 55.0% | |
GTGCAGGGTGGAAATGGACC+CGG | - | chr2_4:14630640-14630659 | Msa0317120:intron | 60.0% | |
TGCAGGGTGGAAATGGACCC+GGG | - | chr2_4:14630641-14630660 | Msa0317120:intron | 60.0% | |
AAAACCACGAGCACGTCCCG+TGG | + | chr2_4:14630774-14630793 | None:intergenic | 60.0% | |
! | ACGGGACGTGCTCGTGGTTT+TGG | - | chr2_4:14630773-14630792 | Msa0317120:intron | 60.0% |
GCAGGGTGGAAATGGACCCG+GGG | - | chr2_4:14630642-14630661 | Msa0317120:intron | 65.0% | |
CGGACCACGGGACGTGCTCG+TGG | - | chr2_4:14630767-14630786 | Msa0317120:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 14629895 | 14633948 | 14629895 | ID=Msa0317120;Name=Msa0317120 |
chr2_4 | mRNA | 14629895 | 14633948 | 14629895 | ID=Msa0317120-mRNA-1;Parent=Msa0317120;Name=Msa0317120-mRNA-1;_AED=0.03;_eAED=0.03;_QI=228|0.75|0.8|1|0.5|0.4|5|420|518 |
chr2_4 | exon | 14629895 | 14630187 | 14629895 | ID=Msa0317120-mRNA-1:exon:5523;Parent=Msa0317120-mRNA-1 |
chr2_4 | exon | 14630224 | 14630503 | 14630224 | ID=Msa0317120-mRNA-1:exon:5522;Parent=Msa0317120-mRNA-1 |
chr2_4 | exon | 14631133 | 14632320 | 14631133 | ID=Msa0317120-mRNA-1:exon:5521;Parent=Msa0317120-mRNA-1 |
chr2_4 | exon | 14632975 | 14633197 | 14632975 | ID=Msa0317120-mRNA-1:exon:5520;Parent=Msa0317120-mRNA-1 |
chr2_4 | exon | 14633728 | 14633948 | 14633728 | ID=Msa0317120-mRNA-1:exon:5519;Parent=Msa0317120-mRNA-1 |
chr2_4 | five_prime_UTR | 14633728 | 14633948 | 14633728 | ID=Msa0317120-mRNA-1:five_prime_utr;Parent=Msa0317120-mRNA-1 |
chr2_4 | five_prime_UTR | 14633191 | 14633197 | 14633191 | ID=Msa0317120-mRNA-1:five_prime_utr;Parent=Msa0317120-mRNA-1 |
chr2_4 | CDS | 14632975 | 14633190 | 14632975 | ID=Msa0317120-mRNA-1:cds;Parent=Msa0317120-mRNA-1 |
chr2_4 | CDS | 14631133 | 14632320 | 14631133 | ID=Msa0317120-mRNA-1:cds;Parent=Msa0317120-mRNA-1 |
chr2_4 | CDS | 14630351 | 14630503 | 14630351 | ID=Msa0317120-mRNA-1:cds;Parent=Msa0317120-mRNA-1 |
chr2_4 | three_prime_UTR | 14630224 | 14630350 | 14630224 | ID=Msa0317120-mRNA-1:three_prime_utr;Parent=Msa0317120-mRNA-1 |
chr2_4 | three_prime_UTR | 14629895 | 14630187 | 14629895 | ID=Msa0317120-mRNA-1:three_prime_utr;Parent=Msa0317120-mRNA-1 |
Gene Sequence |
Protein sequence |