AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0185820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0185820 MtrunA17_Chr5g0400871 89.583 528 27 9 1 506 4 525 0.0 897
Msa0185820 MtrunA17_Chr4g0054351 47.335 638 180 24 1 504 4 619 9.50e-142 422
Msa0185820 MtrunA17_Chr3g0135161 47.854 466 164 11 32 425 45 503 5.43e-124 377
Msa0185820 MtrunA17_Chr1g0152161 55.866 358 99 10 97 415 158 495 5.85e-117 358
Msa0185820 MtrunA17_Chr8g0343851 78.191 188 33 1 236 415 244 431 9.42e-103 319
Msa0185820 MtrunA17_Chr2g0328971 71.574 197 47 2 236 423 163 359 5.21e-97 303
Msa0185820 MtrunA17_Chr4g0032631 61.633 245 70 5 191 423 126 358 4.66e-96 301
Msa0185820 MtrunA17_Chr4g0072291 77.401 177 29 2 236 401 155 331 8.79e-96 299
Msa0185820 MtrunA17_Chr7g0249621 63.404 235 62 3 200 423 232 453 1.86e-95 303
Msa0185820 MtrunA17_Chr5g0412151 70.918 196 46 2 236 420 220 415 5.12e-83 266
Msa0185820 MtrunA17_Chr4g0073521 66.265 166 48 1 239 396 46 211 9.60e-73 234
Msa0185820 MtrunA17_Chr8g0367311 63.277 177 54 3 269 434 22 198 4.90e-70 224
Msa0185820 MtrunA17_Chr8g0355191 62.570 179 57 2 228 396 41 219 2.90e-69 228
Msa0185820 MtrunA17_Chr6g0452911 62.195 164 52 1 243 396 72 235 7.89e-66 217
Msa0185820 MtrunA17_Chr7g0216601 60.694 173 65 1 227 396 60 232 8.12e-66 218
Msa0185820 MtrunA17_Chr8g0355181 56.716 201 73 3 210 396 20 220 1.16e-62 209
Msa0185820 MtrunA17_Chr4g0002011 62.722 169 52 2 239 396 35 203 1.33e-60 202
Msa0185820 MtrunA17_Chr8g0362541 57.527 186 64 2 243 414 80 264 1.24e-58 199
Msa0185820 MtrunA17_Chr4g0053181 49.711 173 69 5 236 405 181 338 1.54e-35 139
Msa0185820 MtrunA17_Chr5g0401891 50.299 167 65 5 236 399 157 308 1.53e-34 136
Msa0185820 MtrunA17_Chr7g0263581 47.305 167 70 5 236 399 144 295 1.37e-32 130
Msa0185820 MtrunA17_Chr2g0305821 59.821 112 37 1 239 342 46 157 2.34e-32 121
Msa0185820 MtrunA17_Chr4g0030191 47.305 167 70 5 236 399 136 287 4.80e-32 128
Msa0185820 MtrunA17_Chr7g0257361 56.489 131 41 3 238 357 55 180 3.99e-31 124
Msa0185820 MtrunA17_Chr2g0325911 44.311 167 60 6 236 399 139 275 5.64e-25 107
Msa0185820 MtrunA17_Chr2g0305831 69.492 59 18 0 338 396 1 59 5.84e-23 97.1
Msa0185820 MtrunA17_Chr3g0126151 45.263 95 51 1 280 374 47 140 9.47e-20 85.5
Msa0185820 MtrunA17_Chr4g0044871 38.889 108 58 3 335 436 96 201 4.48e-12 65.9
Msa0185820 MtrunA17_Chr4g0044881 37.255 102 62 2 335 436 114 213 2.28e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0185820 AT4G37750.1 48.961 433 120 15 52 415 66 466 3.18e-107 331
Msa0185820 AT1G72570.1 62.083 240 74 3 192 414 166 405 2.84e-98 303
Msa0185820 AT5G57390.2 77.297 185 30 3 230 403 73 256 2.76e-97 301
Msa0185820 AT1G51190.1 55.830 283 98 6 153 423 115 382 5.25e-97 305
Msa0185820 AT5G57390.1 77.297 185 30 3 230 403 191 374 2.47e-96 303
Msa0185820 AT5G17430.2 73.469 196 41 2 235 419 140 335 2.12e-95 299
Msa0185820 AT5G17430.1 73.469 196 41 2 235 419 202 397 4.63e-95 300
Msa0185820 AT3G20840.1 70.500 200 47 3 236 423 174 373 7.51e-95 299
Msa0185820 AT3G20840.1 38.372 86 45 1 322 399 169 254 7.14e-11 65.1
Msa0185820 AT5G10510.2 70.466 193 49 1 236 420 223 415 7.28e-82 265
Msa0185820 AT5G65510.4 64.904 208 62 2 219 415 149 356 3.23e-80 257
Msa0185820 AT5G65510.2 64.904 208 62 2 219 415 207 414 5.98e-80 258
Msa0185820 AT5G65510.1 64.904 208 62 2 219 415 207 414 5.98e-80 258
Msa0185820 AT5G10510.7 69.388 196 49 2 236 420 223 418 9.83e-80 259
Msa0185820 AT5G10510.5 69.388 196 49 2 236 420 223 418 9.83e-80 259
Msa0185820 AT5G10510.1 69.388 196 49 2 236 420 246 441 1.45e-79 259
Msa0185820 AT5G10510.6 69.388 196 49 2 236 420 261 456 1.71e-79 259
Msa0185820 AT5G10510.4 69.388 196 49 2 236 420 261 456 1.71e-79 259
Msa0185820 AT5G10510.3 62.500 216 50 2 236 420 261 476 3.53e-75 248
Msa0185820 AT5G65510.3 67.722 158 40 2 219 365 149 306 1.60e-69 225
Msa0185820 AT3G54320.3 66.879 157 49 1 243 396 73 229 2.42e-61 207
Msa0185820 AT3G54320.1 66.879 157 49 1 243 396 73 229 3.48e-61 207
Msa0185820 AT3G54320.4 71.094 128 37 0 269 396 36 163 2.31e-53 184
Msa0185820 AT3G54320.5 71.094 128 37 0 269 396 36 163 2.31e-53 184
Msa0185820 AT1G79700.2 61.538 169 54 2 239 396 48 216 3.73e-52 179
Msa0185820 AT1G16060.1 59.659 176 63 2 243 410 66 241 9.54e-51 177
Msa0185820 AT1G79700.1 57.396 169 51 3 239 396 48 206 1.76e-44 159
Msa0185820 AT1G79700.4 67.188 128 42 0 269 396 7 134 2.83e-43 153
Msa0185820 AT1G79700.3 67.188 128 42 0 269 396 13 140 2.87e-43 154
Msa0185820 AT1G16060.3 61.905 147 51 1 269 410 25 171 1.73e-41 150
Msa0185820 AT4G36920.1 49.701 167 66 5 236 399 136 287 1.30e-34 135
Msa0185820 AT4G36920.2 49.701 167 66 5 236 399 136 287 1.30e-34 135
Msa0185820 AT5G67180.2 46.231 199 77 7 236 419 101 284 4.35e-34 130
Msa0185820 AT5G67180.1 42.534 221 97 7 236 441 101 306 9.06e-34 131
Msa0185820 AT5G67180.3 46.243 173 81 4 236 408 101 261 1.44e-33 129
Msa0185820 AT3G54320.2 71.591 88 25 0 309 396 1 88 3.44e-32 125
Msa0185820 AT2G28550.3 46.707 167 71 5 236 399 158 309 2.32e-31 126
Msa0185820 AT1G16060.2 61.682 107 36 1 309 410 1 107 1.43e-30 118
Msa0185820 AT1G16060.4 61.682 107 36 1 309 410 1 107 1.43e-30 118
Msa0185820 AT1G16060.6 61.682 107 36 1 309 410 1 107 1.43e-30 118
Msa0185820 AT1G16060.5 61.682 107 36 1 309 410 1 107 1.43e-30 118
Msa0185820 AT2G41710.1 55.303 132 43 3 236 356 63 189 1.63e-30 123
Msa0185820 AT2G41710.4 55.303 132 43 3 236 356 63 189 1.99e-30 124
Msa0185820 AT2G41710.3 57.265 117 42 2 243 356 113 224 4.15e-29 120
Msa0185820 AT2G41710.2 53.285 137 43 4 236 356 63 194 3.37e-28 117
Msa0185820 AT2G28550.1 43.114 167 62 6 236 399 158 294 3.44e-24 105
Msa0185820 AT2G28550.4 46.043 139 57 5 236 371 158 281 4.14e-24 103
Msa0185820 AT5G67180.4 41.566 166 84 5 236 401 101 253 1.95e-23 99.8
Msa0185820 AT2G28550.5 44.275 131 57 2 269 399 14 128 1.78e-20 92.0
Msa0185820 AT2G28550.2 46.032 126 50 5 236 358 158 268 2.50e-20 91.3
Msa0185820 AT2G28550.6 46.032 126 50 5 236 358 158 268 2.50e-20 91.3
Msa0185820 AT2G39250.2 39.286 112 51 4 236 344 113 210 1.45e-17 82.4
Msa0185820 AT1G16060.7 63.158 76 23 1 340 410 10 85 2.67e-17 80.5
Msa0185820 AT2G39250.1 39.286 112 51 4 236 344 113 210 6.48e-17 82.4
Msa0185820 AT5G60120.6 36.025 161 66 6 240 389 157 291 1.28e-13 73.6
Msa0185820 AT5G60120.1 36.025 161 66 6 240 389 157 291 1.41e-13 73.6
Msa0185820 AT5G60120.2 36.646 161 65 7 240 389 157 291 1.70e-13 73.2
Msa0185820 AT5G60120.4 36.646 161 65 7 240 389 157 291 2.11e-13 72.4
Msa0185820 AT5G60120.3 36.646 161 65 7 240 389 157 291 2.11e-13 72.4
Msa0185820 AT5G60120.5 36.646 161 65 7 240 389 157 291 2.11e-13 72.4
Msa0185820 AT3G54990.2 41.748 103 49 3 236 338 127 218 3.67e-13 69.7
Msa0185820 AT3G54990.1 42.453 106 44 4 236 338 127 218 2.14e-12 68.9

Find 90 sgRNAs with CRISPR-Local

Find 500 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTCTCTTGTACATGATTT+AGG 0.152119 2_1:-37459 None:intergenic
GCTTACTTGCATTTCTTCTT+TGG 0.217497 2_1:-37380 None:intergenic
AAAATATGACGTGGAGAAAA+TGG 0.277451 2_1:+44992 Msa0185820:CDS
CATAACTATGGATATTACTA+TGG 0.312407 2_1:+37158 Msa0185820:CDS
GTAGATATGAAGCTCATCTA+TGG 0.319596 2_1:+38145 Msa0185820:CDS
ACAAGCTTACCAATGCTCTT+TGG 0.325053 2_1:+45224 Msa0185820:CDS
TACGAGCCTGTTGGGGAGTC+TGG 0.330751 2_1:+37480 Msa0185820:CDS
TCTTCACTGCTAAGAAGGTT+AGG 0.347377 2_1:-44960 None:intergenic
GCAATGGGAATCTCTCATTA+TGG 0.348044 2_1:+37349 Msa0185820:intron
GGAAATAAAGATCTCTATCT+TGG 0.352592 2_1:+39039 Msa0185820:CDS
CCTACACCTCTTCATAACTA+TGG 0.352711 2_1:+37146 Msa0185820:CDS
AACATGAGAGTTGTTGCTTC+TGG 0.354947 2_1:-37510 None:intergenic
CAAGAGAATACGAGCCTGTT+GGG 0.358991 2_1:+37472 Msa0185820:CDS
TATGGCTGCACTCAAGTATT+GGG 0.360270 2_1:+38537 Msa0185820:CDS
TTTAGGTTATTCAAATTGTT+TGG 0.361139 2_1:-37442 None:intergenic
TTCTCTTCACAAATGAATAT+AGG 0.368739 2_1:+37071 Msa0185820:CDS
ATGTTCTTTGCCCAAAGGTT+TGG 0.385434 2_1:-37834 None:intergenic
CTTGCCACCTTCCATGTTGA+TGG 0.386912 2_1:-38996 None:intergenic
TATATGTTATTTATTGAGAA+TGG 0.399769 2_1:-45098 None:intergenic
AAGAATCAGAACCAAACCTT+TGG 0.415358 2_1:+37823 Msa0185820:CDS
GGAAGGTGGCAAGCTCGAAT+AGG 0.415431 2_1:+39006 Msa0185820:CDS
GCTCGAATAGGGAGAGTTGC+TGG 0.417556 2_1:+39018 Msa0185820:CDS
TTGGCTCATGGTATGAAGTT+TGG 0.418171 2_1:-37423 None:intergenic
AGCTGCAAGAGCTTATGATA+TGG 0.426373 2_1:+38519 Msa0185820:CDS
CTTCACTGCTAAGAAGGTTA+GGG 0.437353 2_1:-44959 None:intergenic
GAAGGTGGCAAGCTCGAATA+GGG 0.444273 2_1:+39007 Msa0185820:CDS
GCTCCGCCAGACTCCCCAAC+AGG 0.448381 2_1:-37486 None:intergenic
ATCTAAGGAGATGGGTATCA+AGG 0.454082 2_1:+37635 Msa0185820:CDS
CACATTATCGTTTCTTAAGA+CGG 0.469666 2_1:-37536 None:intergenic
AAACTTGTCACAATTGAAGA+AGG 0.470854 2_1:-45167 None:intergenic
ATATGGCTGCACTCAAGTAT+TGG 0.471306 2_1:+38536 Msa0185820:CDS
AACAGCTTCAGCAGCAGTAG+TGG 0.475357 2_1:-37102 None:intergenic
CCTTGTTACTCCTCTATACA+TGG 0.477522 2_1:-38876 None:intergenic
AGAATCAGAACCAAACCTTT+GGG 0.481711 2_1:+37824 Msa0185820:CDS
TATTCAAATTGTTTGGCTCA+TGG 0.483216 2_1:-37435 None:intergenic
GCTGCTGAAGCTGTTCCAAC+AGG 0.484113 2_1:+37110 Msa0185820:CDS
ACACAGCTTGATTGTGAGCT+AGG 0.489113 2_1:-37718 None:intergenic
TAGCTTCTTCACTGCTAAGA+AGG 0.489640 2_1:-44965 None:intergenic
AATACGTTGCTCATTTAAGA+AGG 0.490643 2_1:+38741 Msa0185820:CDS
TCCATGTCTTCAAACGTACA+TGG 0.491556 2_1:-45038 None:intergenic
TCAACGGAAGCAGAATCAAT+AGG 0.498341 2_1:-37763 None:intergenic
ATAGTTGGAAAATTATCAAA+AGG 0.505989 2_1:+38685 Msa0185820:intron
GATGAAAAGGAAGCATCAAA+TGG 0.506107 2_1:+37789 Msa0185820:CDS
ACCATGTACGTTTGAAGACA+TGG 0.509219 2_1:+45037 Msa0185820:CDS
AAAGAGGGCCAAGCTAGAAA+AGG 0.510100 2_1:+38183 Msa0185820:CDS
AACGATAATGTGATCTTAGA+CGG 0.518135 2_1:+37547 Msa0185820:CDS
CAAAGAACATCTCAATATAG+AGG 0.525445 2_1:+37847 Msa0185820:CDS
CTTCCGTTGATACGATGAAA+AGG 0.528267 2_1:+37776 Msa0185820:CDS
TGGAAAATTTATACGAGTGG+AGG 0.535662 2_1:-38563 None:intergenic
GCCTTGCCCATCATGCATGA+TGG 0.542542 2_1:+37212 Msa0185820:CDS
AGAGGGGCTTCCATGTATAG+AGG 0.543527 2_1:+38866 Msa0185820:CDS
GAAGTCATTCCAAAGAGCAT+TGG 0.544370 2_1:-45233 None:intergenic
TACTGGAAAATTTATACGAG+TGG 0.545226 2_1:-38566 None:intergenic
TTGAGATGTTCTTTGCCCAA+AGG 0.546617 2_1:-37839 None:intergenic
TCAGCTACACAAGAGGAAGC+AGG 0.548680 2_1:+44840 Msa0185820:intron
TGTAAAATCAGGAAAAGTAG+TGG 0.560031 2_1:+38836 Msa0185820:intron
ATATGATGAAGAAGAAGTAG+AGG 0.560222 2_1:+45118 Msa0185820:CDS
TTGTGATCCATCATGCATGA+TGG 0.561120 2_1:-37219 None:intergenic
TAGATATGAAGCTCATCTAT+GGG 0.566225 2_1:+38146 Msa0185820:CDS
GGTTGATAATAAAAGCCTGT+TGG 0.572958 2_1:-37125 None:intergenic
GGAAAATTTATACGAGTGGA+GGG 0.573107 2_1:-38562 None:intergenic
CCATAGTTATGAAGAGGTGT+AGG 0.575108 2_1:-37146 None:intergenic
TTCTTAGCAGTGAAGAAGCT+AGG 0.580054 2_1:+44967 Msa0185820:CDS
GCTTCAGCAGCAGTAGTGGA+AGG 0.581457 2_1:-37098 None:intergenic
GAAGTTCATGGAAAATATTG+AGG 0.582271 2_1:+37001 None:intergenic
ACGATAATGTGATCTTAGAC+GGG 0.584490 2_1:+37548 Msa0185820:CDS
AAAGTAGTGGATTCTCAAGA+GGG 0.589213 2_1:+38849 Msa0185820:CDS
ACAAGAGAATACGAGCCTGT+TGG 0.589238 2_1:+37471 Msa0185820:CDS
TGTGATCCATCATGCATGAT+GGG 0.592730 2_1:-37218 None:intergenic
GAGCCTGTTGGGGAGTCTGG+CGG 0.596564 2_1:+37483 Msa0185820:CDS
GGTTATGAAAGTGAACATGT+TGG 0.604732 2_1:+37179 Msa0185820:CDS
TAATATCCATAGTTATGAAG+AGG 0.606260 2_1:-37152 None:intergenic
TCTAAGGAGATGGGTATCAA+GGG 0.607562 2_1:+37636 Msa0185820:CDS
CAAGCTAGAAAAGGAAAGCA+AGG 0.608427 2_1:+38192 Msa0185820:CDS
AAATTATCAAAAGGAACTTG+AGG 0.613334 2_1:+38694 Msa0185820:CDS
AAAAGTAGTGGATTCTCAAG+AGG 0.615091 2_1:+38848 Msa0185820:CDS
AAGAGAATACGAGCCTGTTG+GGG 0.620765 2_1:+37473 Msa0185820:CDS
GTGTATTTGACACTTGTGCA+TGG 0.627663 2_1:-37678 None:intergenic
ATTGCTGCTATAAAATTCAG+AGG 0.637823 2_1:+44876 Msa0185820:CDS
TCCATCATGCATGATGGGCA+AGG 0.639163 2_1:-37213 None:intergenic
GCAGACACCATCAACATGGA+AGG 0.640576 2_1:+38989 Msa0185820:intron
CCATGTATAGAGGAGTAACA+AGG 0.642280 2_1:+38876 Msa0185820:CDS
GACACCATCAACATGGAAGG+TGG 0.644993 2_1:+38992 Msa0185820:intron
CATGATGGATCACAAGCACA+AGG 0.647359 2_1:+37227 Msa0185820:CDS
ATGGCTGCACTCAAGTATTG+GGG 0.648728 2_1:+38538 Msa0185820:CDS
AGCTAGGAGAAAATATGACG+TGG 0.649958 2_1:+44983 Msa0185820:CDS
TGTAGCAGACACCATCAACA+TGG 0.652346 2_1:+38985 Msa0185820:intron
TGATATAACAAAATATGACG+TGG 0.656360 2_1:+44920 Msa0185820:CDS
TGATTGTGAGCTAGGACTCG+CGG 0.676952 2_1:-37710 None:intergenic
AAGTAGTGGATTCTCAAGAG+GGG 0.719782 2_1:+38850 Msa0185820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGAATATAACAAATAT+TGG - chr2_1:37264-37283 None:intergenic 10.0%
!!! TTTTAACTAATAAAATACAA+TGG + chr2_1:39381-39400 Msa0185820:intron 10.0%
!! AATAAAAGAAAATATTAAAG+TGG - chr2_1:39751-39770 None:intergenic 10.0%
!! AATAAACTAAAAAAATAAAG+GGG + chr2_1:41002-41021 Msa0185820:intron 10.0%
!!! TTTTTTTACAAAATTTAAAC+TGG + chr2_1:41570-41589 Msa0185820:intron 10.0%
!!! TAAATTTAAAATAGACAATT+TGG - chr2_1:43661-43680 None:intergenic 10.0%
!! TTATAATTAAAAGGATTAAT+AGG - chr2_1:45509-45528 None:intergenic 10.0%
!!! ATTTTTAAGTATATAATTTC+AGG - chr2_1:45575-45594 None:intergenic 10.0%
!!! AATCAAAATAGTAACATTTT+TGG + chr2_1:37041-37060 Msa0185820:CDS 15.0%
!!! CTATATATGATTTTAAATTG+CGG + chr2_1:37937-37956 Msa0185820:intron 15.0%
!!! CAAATTTTTTCACAATATAA+AGG - chr2_1:37981-38000 None:intergenic 15.0%
!!! GATTTTACAAAGTTAAATTA+TGG - chr2_1:38825-38844 None:intergenic 15.0%
!!! TAATTTAACTTTGTAAAATC+AGG + chr2_1:38825-38844 Msa0185820:intron 15.0%
!! ATATCATTTCTCAAATATAT+TGG - chr2_1:39122-39141 None:intergenic 15.0%
!!! TATTTGAGAAATGATATTTT+TGG + chr2_1:39125-39144 Msa0185820:intron 15.0%
!!! TAAGTTTTTTTTGTACAAAT+GGG - chr2_1:39454-39473 None:intergenic 15.0%
!!! TTAAGTTTTTTTTGTACAAA+TGG - chr2_1:39455-39474 None:intergenic 15.0%
!!! TTTTCTTTTATTAAAGATGT+TGG + chr2_1:39759-39778 Msa0185820:intron 15.0%
!! ATGCATTCAAAATATAAAAA+TGG + chr2_1:41520-41539 Msa0185820:intron 15.0%
!!! ATTTTGAATGAATTTTTTGT+CGG - chr2_1:41719-41738 None:intergenic 15.0%
!! AATCATGTATATTAAGAAAA+TGG - chr2_1:41801-41820 None:intergenic 15.0%
!! AATAAAACAATTATTCAAAC+CGG + chr2_1:42461-42480 Msa0185820:intron 15.0%
!! TTTAAATATTCAGTATCATT+GGG - chr2_1:43223-43242 None:intergenic 15.0%
!!! TTTTAAATATTCAGTATCAT+TGG - chr2_1:43224-43243 None:intergenic 15.0%
!!! TGTCTATTTTAAATTTAAAG+AGG + chr2_1:43664-43683 Msa0185820:intron 15.0%
!!! GTCTATTTTAAATTTAAAGA+GGG + chr2_1:43665-43684 Msa0185820:intron 15.0%
!!! AAATTGTTTATTGTTGTTAT+AGG - chr2_1:43787-43806 None:intergenic 15.0%
!!! AAAATAATACCGATTTATAA+AGG + chr2_1:43978-43997 Msa0185820:intron 15.0%
!! ACAAAAAAAAAAAGAACATA+AGG - chr2_1:44421-44440 None:intergenic 15.0%
!! TAATGAAAATTAAAAATAGG+CGG - chr2_1:44525-44544 None:intergenic 15.0%
!! GCTTAATGAAAATTAAAAAT+AGG - chr2_1:44528-44547 None:intergenic 15.0%
!! AAAAAAACATGTTAAAAACT+GGG - chr2_1:44668-44687 None:intergenic 15.0%
!! AAAAAAAACATGTTAAAAAC+TGG - chr2_1:44669-44688 None:intergenic 15.0%
!!! AAAAGTTTTCATAACAAAAA+GGG - chr2_1:44821-44840 None:intergenic 15.0%
!!! TATATGTTATTTATTGAGAA+TGG - chr2_1:45101-45120 None:intergenic 15.0%
!! ACAGTTTATAAATTAAATTC+TGG + chr2_1:45734-45753 Msa0185820:intron 15.0%
!!! ATAAATTAAATTCTGGAATA+TGG + chr2_1:45741-45760 Msa0185820:intron 15.0%
!!! TAAATTAAATTCTGGAATAT+GGG + chr2_1:45742-45761 Msa0185820:intron 15.0%
!!! TTTCAAATTTTCATTTTTGT+TGG + chr2_1:45786-45805 Msa0185820:intron 15.0%
!!! TGTTACTATTTTGATTGTTT+AGG - chr2_1:37037-37056 None:intergenic 20.0%
!!! TTTAGGTTATTCAAATTGTT+TGG - chr2_1:37445-37464 None:intergenic 20.0%
!!! ACTTTTAATAATGTGACAAA+AGG - chr2_1:37900-37919 None:intergenic 20.0%
!! AAAATATACACACATAAAAG+AGG - chr2_1:38242-38261 None:intergenic 20.0%
!!! CTTTTATGTGTGTATATTTT+TGG + chr2_1:38242-38261 Msa0185820:intron 20.0%
!! ACAAAAACATTCTTAACATT+TGG - chr2_1:38410-38429 None:intergenic 20.0%
!! ATCTCATGATAATATATAGT+TGG + chr2_1:38670-38689 Msa0185820:intron 20.0%
!! ATAGTTGGAAAATTATCAAA+AGG + chr2_1:38685-38704 Msa0185820:intron 20.0%
!!! TGGTTTTGTATATTAACATA+TGG - chr2_1:38805-38824 None:intergenic 20.0%
!! GTTTATAAACCATTTAACAT+TGG - chr2_1:39275-39294 None:intergenic 20.0%
!! AAATGTACATTCAATATAAG+AGG - chr2_1:39600-39619 None:intergenic 20.0%
!! TTATAATAATACTTAGGAAG+AGG + chr2_1:39631-39650 Msa0185820:intron 20.0%
!! TATAATAATACTTAGGAAGA+GGG + chr2_1:39632-39651 Msa0185820:intron 20.0%
!!! CTTTTAGGAGTTTTTTTTAT+TGG - chr2_1:40333-40352 None:intergenic 20.0%
!!! AATTTAGGTGTTTTTTTTGT+TGG - chr2_1:40368-40387 None:intergenic 20.0%
!! AAAAAACACCTAAATTTAAG+AGG + chr2_1:40372-40391 Msa0185820:intron 20.0%
!!! GAGTTATTTTAAATCGTAAT+TGG - chr2_1:40518-40537 None:intergenic 20.0%
!! AAAATGCAAATGAAAATTGT+TGG + chr2_1:40544-40563 Msa0185820:intron 20.0%
!! TAATTTCAAAACTACTACTA+AGG - chr2_1:40619-40638 None:intergenic 20.0%
!!! TTCTAGTTTACTAAATTTTG+TGG + chr2_1:41199-41218 Msa0185820:intron 20.0%
!! ATCTAACATAATCAATAGAA+TGG + chr2_1:41237-41256 Msa0185820:intron 20.0%
!! TTAATAAATCATGACATGTT+TGG - chr2_1:41442-41461 None:intergenic 20.0%
!!! TGTTTCTATATATGTATAGT+TGG - chr2_1:41596-41615 None:intergenic 20.0%
!!! AATTGAAAAGTATGATACTT+GGG - chr2_1:42186-42205 Msa0185830:exon 20.0%
!!! TAATTGAAAAGTATGATACT+TGG - chr2_1:42187-42206 Msa0185830:exon 20.0%
!! TAACTTAAACAAACTAACTT+CGG + chr2_1:42517-42536 Msa0185820:intron 20.0%
!!! TATTTGTTATGTTTCTAACT+TGG - chr2_1:43098-43117 None:intergenic 20.0%
!! CAACAAACTCTTAAATTTAA+AGG + chr2_1:43179-43198 Msa0185820:intron 20.0%
!!! AGTTTTATAAGTAAATATGC+TGG - chr2_1:43419-43438 None:intergenic 20.0%
!!! TTAATGGATGAGATTTTATT+GGG - chr2_1:43854-43873 None:intergenic 20.0%
!! TATATTATGTTTGTGACATA+TGG - chr2_1:43902-43921 None:intergenic 20.0%
!!! TTCTATAAACGCTATTATTT+TGG - chr2_1:44632-44651 None:intergenic 20.0%
!!! GAAAAGTTTTCATAACAAAA+AGG - chr2_1:44822-44841 None:intergenic 20.0%
!! CTAAAAATGAATGCAAATTA+AGG - chr2_1:45464-45483 None:intergenic 20.0%
!!! CTTAATTTGCATTCATTTTT+AGG + chr2_1:45462-45481 Msa0185820:intron 20.0%
!! TGTAACGCTTTATAATTAAA+AGG - chr2_1:45518-45537 None:intergenic 20.0%
!!! AATTTGAAACCAATAATGAA+CGG - chr2_1:45775-45794 None:intergenic 20.0%
!! CATATTTATGATAGTACTAT+TGG + chr2_1:45897-45916 Msa0185820:intron 20.0%
!!! TCCAATTTAACTTTATCTAA+AGG + chr2_1:45957-45976 Msa0185820:intron 20.0%
!! TCCTTTAGATAAAGTTAAAT+TGG - chr2_1:45961-45980 None:intergenic 20.0%
!!! ATTTTGATTGTTTAGGCTAA+AGG - chr2_1:37030-37049 None:intergenic 25.0%
! TTCTCTTCACAAATGAATAT+AGG + chr2_1:37071-37090 Msa0185820:CDS 25.0%
! TAATATCCATAGTTATGAAG+AGG - chr2_1:37155-37174 None:intergenic 25.0%
! CATAACTATGGATATTACTA+TGG + chr2_1:37158-37177 Msa0185820:CDS 25.0%
! TAACTATTTATGTGTAGCAA+TGG + chr2_1:37333-37352 Msa0185820:intron 25.0%
! AACTATTTATGTGTAGCAAT+GGG + chr2_1:37334-37353 Msa0185820:intron 25.0%
! TATTCTCTTGTACATGATTT+AGG - chr2_1:37462-37481 None:intergenic 25.0%
! ATTTCATCCTCAACTATATT+TGG - chr2_1:37610-37629 None:intergenic 25.0%
!! AGGATGAAATTTTTGATCTA+AGG + chr2_1:37620-37639 Msa0185820:intron 25.0%
!! AAATTTTTGATCTAAGGAGA+TGG + chr2_1:37626-37645 Msa0185820:CDS 25.0%
!! AATTTTTGATCTAAGGAGAT+GGG + chr2_1:37627-37646 Msa0185820:CDS 25.0%
!! CTGCAATATAAAGGATTTTA+AGG - chr2_1:38038-38057 None:intergenic 25.0%
! AATTGTAGTCTGCAATATAA+AGG - chr2_1:38047-38066 None:intergenic 25.0%
!! AACTCCAAGAATTTTATTGT+AGG + chr2_1:38475-38494 Msa0185820:intron 25.0%
! GCAAAGAATTTAATCATTAC+TGG - chr2_1:38586-38605 None:intergenic 25.0%
! AAATTATCAAAAGGAACTTG+AGG + chr2_1:38694-38713 Msa0185820:CDS 25.0%
! AAAATGTGTCAAATACACAA+GGG - chr2_1:39365-39384 None:intergenic 25.0%
! TAAAATGTGTCAAATACACA+AGG - chr2_1:39366-39385 None:intergenic 25.0%
! ACTTGAAAAGATTAGATTGA+TGG + chr2_1:39568-39587 Msa0185820:intron 25.0%
!! AAAATAAGTGCTATTAAAGG+GGG - chr2_1:39873-39892 None:intergenic 25.0%
!! CAAAATAAGTGCTATTAAAG+GGG - chr2_1:39874-39893 None:intergenic 25.0%
!! CCAAAATAAGTGCTATTAAA+GGG - chr2_1:39875-39894 None:intergenic 25.0%
! ACTTTAATAGCACTAGAATA+AGG - chr2_1:40026-40045 None:intergenic 25.0%
!!! GCGTTTTATTATAGCATTTT+TGG - chr2_1:40189-40208 None:intergenic 25.0%
!!! GTTTTTTTTATTGGCAATTG+TGG - chr2_1:40324-40343 None:intergenic 25.0%
! TAATAGACTTAAACCGTAAT+TGG - chr2_1:40428-40447 None:intergenic 25.0%
! TTTCTATAAGTTCTCACTAA+TGG + chr2_1:40639-40658 Msa0185820:intron 25.0%
!! AGTAGTTAAATTGTTGATTG+CGG - chr2_1:40768-40787 None:intergenic 25.0%
!! TTTACTAAATTTTGTGGCAA+GGG + chr2_1:41205-41224 Msa0185820:intron 25.0%
!! TTATTGTTGGTTGTAATTGT+AGG - chr2_1:41416-41435 None:intergenic 25.0%
! ACATGTTTGGTTATTATTGT+TGG - chr2_1:41429-41448 None:intergenic 25.0%
! ATGTCATGATTTATTAAGAG+TGG + chr2_1:41445-41464 Msa0185820:intron 25.0%
! ATTAAGAAAATGGAGTACAA+GGG - chr2_1:41791-41810 None:intergenic 25.0%
! TATTAAGAAAATGGAGTACA+AGG - chr2_1:41792-41811 None:intergenic 25.0%
! TCATCATAAAGAAAGTAAGA+TGG + chr2_1:41823-41842 Msa0185820:intron 25.0%
! AATGCAAAAGATTTCTAACT+TGG - chr2_1:41901-41920 None:intergenic 25.0%
!!! TGAGCTATTTTTAGATTGTA+GGG - chr2_1:42016-42035 Msa0185830:three_prime_UTR 25.0%
! AACTTAAACAAACTAACTTC+GGG + chr2_1:42518-42537 Msa0185820:intron 25.0%
!!! TTTGTCACTTTCAATAAACT+AGG + chr2_1:42563-42582 Msa0185820:intron 25.0%
!!! TGTATTGTTTCTCAGATTTT+AGG - chr2_1:42725-42744 Msa0185830:intron 25.0%
! TAAAATCTGAGAAACAATAC+AGG + chr2_1:42724-42743 Msa0185820:intron 25.0%
!! TTGAAAAGTTTGTTCAAGTT+CGG - chr2_1:43162-43181 None:intergenic 25.0%
! AGCTTCTTAAATAATTTGAC+GGG - chr2_1:43279-43298 None:intergenic 25.0%
! GAGCTTCTTAAATAATTTGA+CGG - chr2_1:43280-43299 None:intergenic 25.0%
!! TTTTCAATTGAGATAAGTAC+TGG - chr2_1:43360-43379 None:intergenic 25.0%
! GTACTTATCTCAATTGAAAA+AGG + chr2_1:43360-43379 Msa0185820:intron 25.0%
! AGTTCAAATAAGTAAATCCA+AGG - chr2_1:43390-43409 None:intergenic 25.0%
! ATTTGGATGATCAATGTATT+GGG - chr2_1:43644-43663 None:intergenic 25.0%
! AATTTGGATGATCAATGTAT+TGG - chr2_1:43645-43664 None:intergenic 25.0%
!!! AGGTAGTTTTTTAAGTTTAC+AGG - chr2_1:43724-43743 None:intergenic 25.0%
! TGTTTGTAATTGTAGACATT+TGG - chr2_1:43755-43774 None:intergenic 25.0%
!!! GTTAATGGATGAGATTTTAT+TGG - chr2_1:43855-43874 None:intergenic 25.0%
! TCTGTTTGTCCTTTATAAAT+CGG - chr2_1:43990-44009 None:intergenic 25.0%
! AAATAGGAATTGAAATGAGT+GGG + chr2_1:44050-44069 Msa0185820:intron 25.0%
!!! TTCTTTTTGTTTTGTTCTGT+GGG + chr2_1:44461-44480 Msa0185820:intron 25.0%
! TGATATAACAAAATATGACG+TGG + chr2_1:44920-44939 Msa0185820:CDS 25.0%
! AAACAAAACTGATTATGCAT+CGG - chr2_1:45324-45343 None:intergenic 25.0%
!!! ATAATCAGTTTTGTTTCGTT+CGG + chr2_1:45328-45347 Msa0185820:intron 25.0%
!! ACAATTTTCACGTTACAAAT+TGG - chr2_1:45624-45643 None:intergenic 25.0%
!! ATGTTCAAGCTATATTTTGT+CGG + chr2_1:45667-45686 Msa0185820:intron 25.0%
!!! TTTATAAACTGTTTCTAGCA+AGG - chr2_1:45726-45745 None:intergenic 25.0%
! TATTCAAATTGTTTGGCTCA+TGG - chr2_1:37438-37457 None:intergenic 30.0%
CACATTATCGTTTCTTAAGA+CGG - chr2_1:37539-37558 None:intergenic 30.0%
AACGATAATGTGATCTTAGA+CGG + chr2_1:37547-37566 Msa0185820:CDS 30.0%
!! TCTTCTAGCTGATATTTTGT+CGG - chr2_1:37574-37593 None:intergenic 30.0%
CAAAGAACATCTCAATATAG+AGG + chr2_1:37847-37866 Msa0185820:CDS 30.0%
GCTTGATTTATAACGAATGT+TGG + chr2_1:38100-38119 Msa0185820:intron 30.0%
!! AATGTTGGTTTATCAGACAT+AGG + chr2_1:38115-38134 Msa0185820:intron 30.0%
TAGATATGAAGCTCATCTAT+GGG + chr2_1:38146-38165 Msa0185820:CDS 30.0%
GATAACAGCTGTAAAAAAGA+GGG + chr2_1:38168-38187 Msa0185820:CDS 30.0%
! CAAAATGCACAGCTTTTATA+AGG - chr2_1:38300-38319 None:intergenic 30.0%
AATGATTCCTCAGTTTATCT+AGG + chr2_1:38376-38395 Msa0185820:intron 30.0%
AATCTTACCTAGATAAACTG+AGG - chr2_1:38386-38405 None:intergenic 30.0%
! CCTCTTTTTCTATCATCATA+AGG - chr2_1:38436-38455 None:intergenic 30.0%
CCTTATGATGATAGAAAAAG+AGG + chr2_1:38433-38452 Msa0185820:intron 30.0%
! TCCAAGAATTTTATTGTAGG+AGG + chr2_1:38478-38497 Msa0185820:intron 30.0%
ACCTCCTACAATAAAATTCT+TGG - chr2_1:38482-38501 None:intergenic 30.0%
TACTGGAAAATTTATACGAG+TGG - chr2_1:38569-38588 None:intergenic 30.0%
TCCTTGAATTGAAGACAAAA+TGG - chr2_1:38608-38627 None:intergenic 30.0%
AATACGTTGCTCATTTAAGA+AGG + chr2_1:38741-38760 Msa0185820:CDS 30.0%
TGTAAAATCAGGAAAAGTAG+TGG + chr2_1:38836-38855 Msa0185820:intron 30.0%
GGAAATAAAGATCTCTATCT+TGG + chr2_1:39039-39058 Msa0185820:CDS 30.0%
!!! GAGTATACTCTCACATTTTT+TGG + chr2_1:39072-39091 Msa0185820:intron 30.0%
ATACGCATTCCAATGTTAAA+TGG + chr2_1:39263-39282 Msa0185820:intron 30.0%
! CCCTTTAATAGCACTTATTT+TGG + chr2_1:39872-39891 Msa0185820:intron 30.0%
! GCCAAAATAAGTGCTATTAA+AGG - chr2_1:39876-39895 None:intergenic 30.0%
!! TGTTGCTATTTAATAGCGTT+TGG - chr2_1:39969-39988 None:intergenic 30.0%
! GTAGCCTTTTTACTCAAATA+GGG + chr2_1:40092-40111 Msa0185820:intron 30.0%
! TAGCCTTTTTACTCAAATAG+GGG + chr2_1:40093-40112 Msa0185820:intron 30.0%
AAACCCCTATTTGAGTAAAA+AGG - chr2_1:40099-40118 None:intergenic 30.0%
!!! GTTTTTTTTGTTGGTAACTG+TGG - chr2_1:40359-40378 None:intergenic 30.0%
CGTTTCATATTATATGACAC+AGG - chr2_1:40463-40482 None:intergenic 30.0%
CAAAACTACTACTAAGGATT+GGG - chr2_1:40613-40632 None:intergenic 30.0%
TCAAAACTACTACTAAGGAT+TGG - chr2_1:40614-40633 None:intergenic 30.0%
TCTTCATCCTAGATTTAGTA+AGG + chr2_1:40697-40716 Msa0185820:intron 30.0%
CTTCATCCTAGATTTAGTAA+GGG + chr2_1:40698-40717 Msa0185820:intron 30.0%
CAAGATTGATACACATATTG+GGG - chr2_1:40725-40744 None:intergenic 30.0%
CCAAGATTGATACACATATT+GGG - chr2_1:40726-40745 None:intergenic 30.0%
!!! AACGTTGTTTTTGTGTATTG+TGG - chr2_1:40796-40815 None:intergenic 30.0%
! TCTCTGTTTTCCTTCAATAA+CGG - chr2_1:40825-40844 None:intergenic 30.0%
!! AGAGTGTTTTCGCATTTATT+TGG + chr2_1:41141-41160 Msa0185820:intron 30.0%
! GCATTTATTTGGAACTGAAA+AGG + chr2_1:41152-41171 Msa0185820:intron 30.0%
! GTTTACTAAATTTTGTGGCA+AGG + chr2_1:41204-41223 Msa0185820:intron 30.0%
ACATAATCAATAGAATGGAG+AGG + chr2_1:41242-41261 Msa0185820:intron 30.0%
AATTGTCACATTGTTTATCC+TGG - chr2_1:41364-41383 None:intergenic 30.0%
TGATTGCAAAGTAATAGACA+AGG - chr2_1:41751-41770 None:intergenic 30.0%
TCTATTACTTTGCAATCAGT+TGG + chr2_1:41753-41772 Msa0185820:intron 30.0%
TTAAGAAAATGGAGTACAAG+GGG - chr2_1:41790-41809 None:intergenic 30.0%
CAAGTTATTAAGAGCCTATT+GGG - chr2_1:41858-41877 None:intergenic 30.0%
AACAAACTTACACAATCAGA+GGG - chr2_1:41977-41996 None:intergenic 30.0%
AAACAAACTTACACAATCAG+AGG - chr2_1:41978-41997 None:intergenic 30.0%
!!! GTGAGCTATTTTTAGATTGT+AGG - chr2_1:42017-42036 Msa0185830:three_prime_UTR 30.0%
TCTTTGTGATTAGGAATTCT+TGG - chr2_1:42213-42232 Msa0185830:CDS 30.0%
AGCAATTTGTCTTTGTGATT+AGG - chr2_1:42222-42241 Msa0185830:CDS 30.0%
CTAAAAGAGAAAGTGATGTA+AGG - chr2_1:42252-42271 Msa0185830:CDS 30.0%
TGATGAAATTAGAATCAGAG+AGG - chr2_1:42299-42318 Msa0185830:CDS 30.0%
TTTAACAATTGCTTGCATCT+TGG - chr2_1:42382-42401 Msa0185830:CDS 30.0%
! CATTTTCCTGATCTGAATAA+GGG + chr2_1:42432-42451 Msa0185820:intron 30.0%
! TAGTCTATTCACAGTTTTTC+CGG - chr2_1:42483-42502 Msa0185830:intron 30.0%
GTGAATAGACTAGATATAGT+TGG + chr2_1:42491-42510 Msa0185820:intron 30.0%
TCACTTTCAATAAACTAGGA+TGG + chr2_1:42567-42586 Msa0185820:intron 30.0%
!!! ATTTTTTGCAGTGTTGAATC+CGG - chr2_1:42973-42992 Msa0185830:CDS 30.0%
CATCAGAAAATAATCACAAC+TGG + chr2_1:43069-43088 Msa0185820:intron 30.0%
TCAAATAAGTAAATCCAAGG+AGG - chr2_1:43387-43406 None:intergenic 30.0%
!! GTTATAGTGTTTCTAGTGTT+TGG - chr2_1:43559-43578 None:intergenic 30.0%
AAATTTAAAGAGGGTCTCAT+CGG + chr2_1:43674-43693 Msa0185820:intron 30.0%
! TTTAAGTTTACAGGACACAT+TGG - chr2_1:43715-43734 None:intergenic 30.0%
!! GTAGACATTTGGTTGATAAT+AGG - chr2_1:43744-43763 None:intergenic 30.0%
ATAGTTGGTTATGTGTTCAT+TGG - chr2_1:43817-43836 None:intergenic 30.0%
GTTCTGTTGAATGAAATAGT+TGG - chr2_1:43832-43851 None:intergenic 30.0%
!! TCGGTATTATTTTGTTTGTC+AGG - chr2_1:43971-43990 None:intergenic 30.0%
TGCTCTTGTCTTTATGAAAT+AGG + chr2_1:44034-44053 Msa0185820:intron 30.0%
GAAATAGGAATTGAAATGAG+TGG + chr2_1:44049-44068 Msa0185820:intron 30.0%
AATAGGAATTGAAATGAGTG+GGG + chr2_1:44051-44070 Msa0185820:intron 30.0%
!! ATAGAACAGTTTAGGTTTTG+TGG + chr2_1:44095-44114 Msa0185820:intron 30.0%
TTTGTGGTATTTGAAGAGTT+TGG + chr2_1:44111-44130 Msa0185820:intron 30.0%
TTGTGGTATTTGAAGAGTTT+GGG + chr2_1:44112-44131 Msa0185820:intron 30.0%
!! TATTTGAAGAGTTTGGGTTT+TGG + chr2_1:44118-44137 Msa0185820:intron 30.0%
!! ATTTGAAGAGTTTGGGTTTT+GGG + chr2_1:44119-44138 Msa0185820:intron 30.0%
!!! GTTCTTTTTGTTTTGTTCTG+TGG + chr2_1:44460-44479 Msa0185820:intron 30.0%
!! TTTCTGAAAAGTGCTATAAC+TGG + chr2_1:44694-44713 Msa0185820:intron 30.0%
GCTATTAAAAGCCAAAATTG+TGG + chr2_1:44769-44788 Msa0185820:intron 30.0%
! TACTATCACTACCACAATTT+TGG - chr2_1:44783-44802 None:intergenic 30.0%
! TTTTATAGCAGCAATGTCAT+AGG - chr2_1:44871-44890 None:intergenic 30.0%
ATTGCTGCTATAAAATTCAG+AGG + chr2_1:44876-44895 Msa0185820:CDS 30.0%
AAAATATGACGTGGAGAAAA+TGG + chr2_1:44929-44948 Msa0185820:CDS 30.0%
ATATGATGAAGAAGAAGTAG+AGG + chr2_1:45118-45137 Msa0185820:CDS 30.0%
AAACTTGTCACAATTGAAGA+AGG - chr2_1:45170-45189 None:intergenic 30.0%
!! TGCATTCATTTTTAGGAAGA+TGG + chr2_1:45469-45488 Msa0185820:intron 30.0%
! TTTTGTTCGTACTATGATGA+AGG + chr2_1:45546-45565 Msa0185820:intron 30.0%
TTTGTTCGTACTATGATGAA+GGG + chr2_1:45547-45566 Msa0185820:intron 30.0%
!!! TGTTGGTCTTTTATCTCTTT+TGG + chr2_1:45803-45822 Msa0185820:intron 30.0%
!! GGTTGATAATAAAAGCCTGT+TGG - chr2_1:37128-37147 None:intergenic 35.0%
GGTTATGAAAGTGAACATGT+TGG + chr2_1:37179-37198 Msa0185820:CDS 35.0%
GCTTACTTGCATTTCTTCTT+TGG - chr2_1:37383-37402 None:intergenic 35.0%
ACGATAATGTGATCTTAGAC+GGG + chr2_1:37548-37567 Msa0185820:CDS 35.0%
! CTTCCTTTTCATCGTATCAA+CGG - chr2_1:37782-37801 None:intergenic 35.0%
!! GATGAAAAGGAAGCATCAAA+TGG + chr2_1:37789-37808 Msa0185820:CDS 35.0%
AAGAATCAGAACCAAACCTT+TGG + chr2_1:37823-37842 Msa0185820:CDS 35.0%
AGAATCAGAACCAAACCTTT+GGG + chr2_1:37824-37843 Msa0185820:CDS 35.0%
! CTCAATATAGAGGTGTAACA+AGG + chr2_1:37857-37876 Msa0185820:intron 35.0%
CAAGCAACAAAAAACACGAA+AGG - chr2_1:38085-38104 None:intergenic 35.0%
GTAGATATGAAGCTCATCTA+TGG + chr2_1:38145-38164 Msa0185820:CDS 35.0%
GGATAACAGCTGTAAAAAAG+AGG + chr2_1:38167-38186 Msa0185820:CDS 35.0%
GGAAAATTTATACGAGTGGA+GGG - chr2_1:38565-38584 None:intergenic 35.0%
TGGAAAATTTATACGAGTGG+AGG - chr2_1:38566-38585 None:intergenic 35.0%
!! GCCATTTTGTCTTCAATTCA+AGG + chr2_1:38604-38623 Msa0185820:intron 35.0%
!! AAAAGTAGTGGATTCTCAAG+AGG + chr2_1:38848-38867 Msa0185820:CDS 35.0%
!! AAAGTAGTGGATTCTCAAGA+GGG + chr2_1:38849-38868 Msa0185820:CDS 35.0%
! CTCTTCTTTTCAGTCACATA+AGG + chr2_1:39708-39727 Msa0185820:intron 35.0%
!! ATTAAAGATGTTGGCTCAGA+AGG + chr2_1:39768-39787 Msa0185820:intron 35.0%
! CGTAGCCTTTTTACTCAAAT+AGG + chr2_1:40091-40110 Msa0185820:intron 35.0%
TCACGAGTCCTCTTAAATTT+AGG - chr2_1:40383-40402 None:intergenic 35.0%
TAAATCGTAATTGGTTGTGC+TGG - chr2_1:40509-40528 None:intergenic 35.0%
CCCAATATGTGTATCAATCT+TGG + chr2_1:40723-40742 Msa0185820:intron 35.0%
GCCAAGATTGATACACATAT+TGG - chr2_1:40727-40746 None:intergenic 35.0%
GCGGTTGTACTAATATATTC+TGG - chr2_1:40749-40768 None:intergenic 35.0%
! CGTTTTCTTACCGTTATTGA+AGG + chr2_1:40812-40831 Msa0185820:intron 35.0%
TTGAAGGAAAACAGAGACAA+CGG + chr2_1:40828-40847 Msa0185820:intron 35.0%
ATAGATTCTGCTTTCCTTCA+AGG - chr2_1:40874-40893 None:intergenic 35.0%
! AAAGGGGTTTCGATTTTCAA+AGG + chr2_1:41018-41037 Msa0185820:intron 35.0%
! GGTTTCGATTTTCAAAGGAA+GGG + chr2_1:41023-41042 Msa0185820:intron 35.0%
! ACAAACATTGAGCGATTTTG+AGG + chr2_1:41070-41089 Msa0185820:intron 35.0%
AATCGAAACTAAGTTCACTG+TGG + chr2_1:41111-41130 Msa0185820:intron 35.0%
ATCGAAACTAAGTTCACTGT+GGG + chr2_1:41112-41131 Msa0185820:intron 35.0%
GAACTGAAAAGGTTTGTCTA+GGG + chr2_1:41163-41182 Msa0185820:intron 35.0%
! AATGGAGAGGTACATTTAGT+TGG + chr2_1:41255-41274 Msa0185820:intron 35.0%
!! TTTGTTTCTACATGTGTAGC+TGG - chr2_1:41654-41673 None:intergenic 35.0%
!!! AATTTTTTGTCGGTCTTGTC+TGG - chr2_1:41709-41728 None:intergenic 35.0%
AGAAAGTAAGATGGATCTGT+AGG + chr2_1:41832-41851 Msa0185820:intron 35.0%
GCAAGTTATTAAGAGCCTAT+TGG - chr2_1:41859-41878 None:intergenic 35.0%
! AGGCTCTTAATAACTTGCAT+CGG + chr2_1:41861-41880 Msa0185820:intron 35.0%
AAGTATGTATAGCATCCTCA+TGG + chr2_1:42081-42100 Msa0185820:intron 35.0%
TAGTTCCAAATGTCCTCAAT+TGG + chr2_1:42269-42288 Msa0185820:intron 35.0%
! GCATTTTCCTGATCTGAATA+AGG + chr2_1:42431-42450 Msa0185820:intron 35.0%
AAACTAGGATGGTTAAATCC+AGG + chr2_1:42578-42597 Msa0185820:intron 35.0%
ATTGAGAGATCAAACAACAG+TGG - chr2_1:42923-42942 Msa0185830:CDS 35.0%
! CTGTTGTTTGATCTCTCAAT+TGG + chr2_1:42923-42942 Msa0185820:intron 35.0%
GAGAAGATCAATGTTATGTC+CGG + chr2_1:42951-42970 Msa0185820:intron 35.0%
TTTCACTCTTGTATAGACCA+TGG - chr2_1:43037-43056 None:intergenic 35.0%
!!! GGCAAAAACTGATTCGTTTT+AGG - chr2_1:43258-43277 None:intergenic 35.0%
! AACATGCTTTTATGCGTTGA+AGG - chr2_1:43326-43345 None:intergenic 35.0%
GAATTCTCCAAGATAGCTTA+TGG + chr2_1:43489-43508 Msa0185820:intron 35.0%
!! GTGTTTCTAGTGTTTGGATA+TGG - chr2_1:43553-43572 None:intergenic 35.0%
TAAAGGACAAACAGAGACAA+TGG + chr2_1:43995-44014 Msa0185820:intron 35.0%
! AATTGAAATGAGTGGGGTTT+TGG + chr2_1:44057-44076 Msa0185820:intron 35.0%
GATCTGTGATAGAACAGTTT+AGG + chr2_1:44087-44106 Msa0185820:intron 35.0%
!! TTTGAAGAGTTTGGGTTTTG+GGG + chr2_1:44120-44139 Msa0185820:intron 35.0%
!!! TTGATGGTGTCTTTTGATGA+AGG + chr2_1:44292-44311 Msa0185820:intron 35.0%
! TGTCTTTTGATGAAGGAGTT+CGG + chr2_1:44299-44318 Msa0185820:intron 35.0%
!! TTTTCTTTTTCGCGCACAAA+GGG - chr2_1:44498-44517 None:intergenic 35.0%
!! ATTTTCTTTTTCGCGCACAA+AGG - chr2_1:44499-44518 None:intergenic 35.0%
!!! TTTTCAGAAAGCGCTATTGT+TGG - chr2_1:44593-44612 None:intergenic 35.0%
! AAACTTTTCAGCTACACAAG+AGG + chr2_1:44833-44852 Msa0185820:intron 35.0%
! ATTTTGCATCTTTTCTGCAC+TGG - chr2_1:45074-45093 None:intergenic 35.0%
! GTAAGCTTGTCATGTTTTCA+GGG - chr2_1:45214-45233 None:intergenic 35.0%
!!! AGTTTTGTTTCGTTCGGAAT+TGG + chr2_1:45334-45353 Msa0185820:intron 35.0%
TGCAAATTAAGGAGATCAGA+CGG - chr2_1:45453-45472 None:intergenic 35.0%
! TTTTATCTCTTTTGGTCACG+TGG + chr2_1:45811-45830 Msa0185820:intron 35.0%
! CCATAGTTATGAAGAGGTGT+AGG - chr2_1:37149-37168 None:intergenic 40.0%
CCTACACCTCTTCATAACTA+TGG + chr2_1:37146-37165 Msa0185820:CDS 40.0%
TGTGATCCATCATGCATGAT+GGG - chr2_1:37221-37240 None:intergenic 40.0%
TTGTGATCCATCATGCATGA+TGG - chr2_1:37222-37241 None:intergenic 40.0%
GCAATGGGAATCTCTCATTA+TGG + chr2_1:37349-37368 Msa0185820:intron 40.0%
TTGGCTCATGGTATGAAGTT+TGG - chr2_1:37426-37445 None:intergenic 40.0%
! AACATGAGAGTTGTTGCTTC+TGG - chr2_1:37513-37532 None:intergenic 40.0%
! CCTCAACTATATTTGGTAGC+TGG - chr2_1:37603-37622 None:intergenic 40.0%
CCAGCTACCAAATATAGTTG+AGG + chr2_1:37600-37619 Msa0185820:intron 40.0%
ATCTAAGGAGATGGGTATCA+AGG + chr2_1:37635-37654 Msa0185820:CDS 40.0%
TCTAAGGAGATGGGTATCAA+GGG + chr2_1:37636-37655 Msa0185820:CDS 40.0%
GTGTATTTGACACTTGTGCA+TGG - chr2_1:37681-37700 None:intergenic 40.0%
TCAACGGAAGCAGAATCAAT+AGG - chr2_1:37766-37785 None:intergenic 40.0%
CTTCCGTTGATACGATGAAA+AGG + chr2_1:37776-37795 Msa0185820:CDS 40.0%
ATGTTCTTTGCCCAAAGGTT+TGG - chr2_1:37837-37856 None:intergenic 40.0%
TTGAGATGTTCTTTGCCCAA+AGG - chr2_1:37842-37861 None:intergenic 40.0%
! GTTGGTTTATCAGACATAGG+TGG + chr2_1:38118-38137 Msa0185820:intron 40.0%
TTTATCAGACATAGGTGGAC+AGG + chr2_1:38123-38142 Msa0185820:intron 40.0%
!!! CTTGCTTTCCTTTTCTAGCT+TGG - chr2_1:38194-38213 None:intergenic 40.0%
CAAGCTAGAAAAGGAAAGCA+AGG + chr2_1:38192-38211 Msa0185820:CDS 40.0%
AGCTGCAAGAGCTTATGATA+TGG + chr2_1:38519-38538 Msa0185820:CDS 40.0%
ATATGGCTGCACTCAAGTAT+TGG + chr2_1:38536-38555 Msa0185820:CDS 40.0%
TATGGCTGCACTCAAGTATT+GGG + chr2_1:38537-38556 Msa0185820:CDS 40.0%
!! AAGTAGTGGATTCTCAAGAG+GGG + chr2_1:38850-38869 Msa0185820:CDS 40.0%
CCTTGTTACTCCTCTATACA+TGG - chr2_1:38879-38898 None:intergenic 40.0%
CCATGTATAGAGGAGTAACA+AGG + chr2_1:38876-38895 Msa0185820:CDS 40.0%
!! CGTTTGGAAAGCGCTATTAT+AGG - chr2_1:39953-39972 None:intergenic 40.0%
!!! TGGTAACTGTGGTTGCTTTT+AGG - chr2_1:40348-40367 None:intergenic 40.0%
TAGTCCAGCACAACCAATTA+CGG + chr2_1:40412-40431 Msa0185820:intron 40.0%
TAAACCGTAATTGGTTGTGC+TGG - chr2_1:40419-40438 None:intergenic 40.0%
TAAGGATTGGGCAAGCTTTA+TGG - chr2_1:40601-40620 None:intergenic 40.0%
! GGGTTTCGATTTTCAAAGGA+AGG + chr2_1:41022-41041 Msa0185820:intron 40.0%
GGAACTGAAAAGGTTTGTCT+AGG + chr2_1:41162-41181 Msa0185820:intron 40.0%
AAAGGTTTGTCTAGGGACTT+TGG + chr2_1:41170-41189 Msa0185820:intron 40.0%
AAGGTTTGTCTAGGGACTTT+GGG + chr2_1:41171-41190 Msa0185820:intron 40.0%
GGGTCGAAGAATTCAATTCT+TGG - chr2_1:42166-42185 Msa0185830:three_prime_UTR 40.0%
GAGTTCCAATTGAGGACATT+TGG - chr2_1:42277-42296 Msa0185830:CDS 40.0%
CTGTTTCCCTTATTCAGATC+AGG - chr2_1:42441-42460 Msa0185830:intron 40.0%
TATGCTTCCTTTATCTGGAG+GGG - chr2_1:42621-42640 Msa0185830:CDS 40.0%
CTATGCTTCCTTTATCTGGA+GGG - chr2_1:42622-42641 Msa0185830:CDS 40.0%
TCTATGCTTCCTTTATCTGG+AGG - chr2_1:42623-42642 Msa0185830:CDS 40.0%
GTCTCTATGCTTCCTTTATC+TGG - chr2_1:42626-42645 Msa0185830:CDS 40.0%
GCAGAAGTTTCAACAAGAAG+CGG - chr2_1:42674-42693 Msa0185830:CDS 40.0%
!!! CTCAGATTTTAGGTTGCAAG+TGG - chr2_1:42715-42734 Msa0185830:intron 40.0%
GAGAAACAATACAGGTACAC+AGG + chr2_1:42732-42751 Msa0185820:intron 40.0%
! TTTTACTACGCGTATGACTC+TGG - chr2_1:42769-42788 Msa0185830:intron 40.0%
TACTTGTGATACTGCAGATG+GGG - chr2_1:42839-42858 Msa0185830:CDS 40.0%
GTACTTGTGATACTGCAGAT+GGG - chr2_1:42840-42859 Msa0185830:CDS 40.0%
AAGTACGAGGATTGCTTCTA+AGG + chr2_1:42854-42873 Msa0185820:intron 40.0%
AGTACGAGGATTGCTTCTAA+GGG + chr2_1:42855-42874 Msa0185820:intron 40.0%
GATCAAACAACAGTGGTTGT+TGG - chr2_1:42916-42935 Msa0185830:CDS 40.0%
TTGTATAGACCATGGATTCC+TGG - chr2_1:43029-43048 None:intergenic 40.0%
CAATTGAAAAAGGACCTCCT+TGG + chr2_1:43370-43389 Msa0185820:intron 40.0%
! GCTGTTTCCATAAGCTATCT+TGG - chr2_1:43499-43518 None:intergenic 40.0%
!!! TTTGGGTTTTGGGGTTTTGA+TGG + chr2_1:44129-44148 Msa0185820:intron 40.0%
!!! GTTTTGATGGTGTACGATCT+GGG + chr2_1:44142-44161 Msa0185820:intron 40.0%
AGAGTGACAGTGAAGAGTTT+GGG + chr2_1:44174-44193 Msa0185820:intron 40.0%
!! ACAGTGAAGAGTTTGGGTTT+TGG + chr2_1:44180-44199 Msa0185820:intron 40.0%
!! CAGTGAAGAGTTTGGGTTTT+GGG + chr2_1:44181-44200 Msa0185820:intron 40.0%
GTTCATGGAGAAGAGATTGA+TGG + chr2_1:44276-44295 Msa0185820:intron 40.0%
GAAAGAAACATTGTGCACGA+TGG + chr2_1:44383-44402 Msa0185820:intron 40.0%
CACAAGTTTAATAGCGCTTC+TGG - chr2_1:44750-44769 None:intergenic 40.0%
CTTCACTGCTAAGAAGGTTA+GGG - chr2_1:44962-44981 None:intergenic 40.0%
TCTTCACTGCTAAGAAGGTT+AGG - chr2_1:44963-44982 None:intergenic 40.0%
TAGCTTCTTCACTGCTAAGA+AGG - chr2_1:44968-44987 None:intergenic 40.0%
TTCTTAGCAGTGAAGAAGCT+AGG + chr2_1:44967-44986 Msa0185820:CDS 40.0%
AGCTAGGAGAAAATATGACG+TGG + chr2_1:44983-45002 Msa0185820:CDS 40.0%
ACCATGTACGTTTGAAGACA+TGG + chr2_1:45037-45056 Msa0185820:CDS 40.0%
TCCATGTCTTCAAACGTACA+TGG - chr2_1:45041-45060 None:intergenic 40.0%
! GGTAAGCTTGTCATGTTTTC+AGG - chr2_1:45215-45234 None:intergenic 40.0%
ACAAGCTTACCAATGCTCTT+TGG + chr2_1:45224-45243 Msa0185820:CDS 40.0%
! GAAGTCATTCCAAAGAGCAT+TGG - chr2_1:45236-45255 None:intergenic 40.0%
GTTTCGTTCGGAATTGGATT+AGG + chr2_1:45340-45359 Msa0185820:intron 40.0%
GGAACGATACCGTTCATTAT+TGG + chr2_1:45763-45782 Msa0185820:intron 40.0%
!! CATGATGGATCACAAGCACA+AGG + chr2_1:37227-37246 Msa0185820:CDS 45.0%
ATGGATCACAAGCACAAGGT+TGG + chr2_1:37231-37250 Msa0185820:intron 45.0%
ACAAGAGAATACGAGCCTGT+TGG + chr2_1:37471-37490 Msa0185820:CDS 45.0%
CAAGAGAATACGAGCCTGTT+GGG + chr2_1:37472-37491 Msa0185820:CDS 45.0%
AAGAGAATACGAGCCTGTTG+GGG + chr2_1:37473-37492 Msa0185820:CDS 45.0%
ACACAGCTTGATTGTGAGCT+AGG - chr2_1:37721-37740 None:intergenic 45.0%
AAAGAGGGCCAAGCTAGAAA+AGG + chr2_1:38183-38202 Msa0185820:CDS 45.0%
CTGAGGAATCATTGTGCATG+TGG - chr2_1:38369-38388 None:intergenic 45.0%
! ATGGCTGCACTCAAGTATTG+GGG + chr2_1:38538-38557 Msa0185820:CDS 45.0%
TGTAGCAGACACCATCAACA+TGG + chr2_1:38985-39004 Msa0185820:intron 45.0%
!! AAAGATGTTGGCTCAGAAGG+AGG + chr2_1:39771-39790 Msa0185820:intron 45.0%
AAGAAAGCCCCCGCTATAAA+AGG + chr2_1:39920-39939 Msa0185820:intron 45.0%
! AGGCTCCTGACCTTTTATAG+CGG - chr2_1:39933-39952 None:intergenic 45.0%
TGGGGACCCTTACTAAATCT+AGG - chr2_1:40707-40726 None:intergenic 45.0%
AAGGAAAACAGAGACAACGG+CGG + chr2_1:40831-40850 Msa0185820:intron 45.0%
AGGTTTGTCTAGGGACTTTG+GGG + chr2_1:41172-41191 Msa0185820:intron 45.0%
AGAAAGTGAGAACGTGTTCC+AGG + chr2_1:41343-41362 Msa0185820:intron 45.0%
! TTGCAATCAGTTGGAGTACC+TGG + chr2_1:41762-41781 Msa0185820:intron 45.0%
TCAGAGAGGAGTTCCAATTG+AGG - chr2_1:42285-42304 Msa0185830:CDS 45.0%
CAGATCAGGAAAATGCTCGA+TGG - chr2_1:42427-42446 Msa0185830:intron 45.0%
GGTTATCTTGCTGATACTCC+TGG - chr2_1:42599-42618 Msa0185830:CDS 45.0%
AGATAACCCCCTCCAGATAA+AGG + chr2_1:42611-42630 Msa0185820:intron 45.0%
ATGCTTCCTTTATCTGGAGG+GGG - chr2_1:42620-42639 Msa0185830:CDS 45.0%
TTTCAACAAGAAGCGGCAGA+GGG - chr2_1:42667-42686 Msa0185830:CDS 45.0%
ACTTGTGATACTGCAGATGG+GGG - chr2_1:42838-42857 Msa0185830:CDS 45.0%
CGTACTTGTGATACTGCAGA+TGG - chr2_1:42841-42860 Msa0185830:CDS 45.0%
TCTGCAGTATCACAAGTACG+AGG + chr2_1:42841-42860 Msa0185820:intron 45.0%
ATAGACCATGGATTCCTGGA+AGG - chr2_1:43025-43044 None:intergenic 45.0%
AGGACAAACAGAGACAATGG+CGG + chr2_1:43998-44017 Msa0185820:intron 45.0%
!!! GGTTTTGATGGTGTACGATC+TGG + chr2_1:44141-44160 Msa0185820:intron 45.0%
GAGAGTGACAGTGAAGAGTT+TGG + chr2_1:44173-44192 Msa0185820:intron 45.0%
!!! TTGGGTTTTGGGTTCACGAT+TGG + chr2_1:44192-44211 Msa0185820:intron 45.0%
!!! TGGGTTTTGGGTTCACGATT+GGG + chr2_1:44193-44212 Msa0185820:intron 45.0%
! TTGATGAAGGAGTTCGGTGA+TGG + chr2_1:44305-44324 Msa0185820:intron 45.0%
CAGGAACGTAAGTACTTCGT+CGG + chr2_1:44336-44355 Msa0185820:intron 45.0%
!! AGAAAGCGCTATTGTTGGAG+GGG - chr2_1:44588-44607 None:intergenic 45.0%
!! CAGAAAGCGCTATTGTTGGA+GGG - chr2_1:44589-44608 None:intergenic 45.0%
!! TCAGAAAGCGCTATTGTTGG+AGG - chr2_1:44590-44609 None:intergenic 45.0%
AAAACAGACAGTGGCATCTG+AGG - chr2_1:45290-45309 None:intergenic 45.0%
!! TTATATATGAAAAATAAAAT+TGG + chr2_1:38946-38965 Msa0185820:intron 5.0%
!! TTATAATTATAATAATACTT+AGG + chr2_1:39625-39644 Msa0185820:intron 5.0%
!! ATAATAAACTAAAAAAATAA+AGG + chr2_1:41000-41019 Msa0185820:intron 5.0%
!! TAATAAACTAAAAAAATAAA+GGG + chr2_1:41001-41020 Msa0185820:intron 5.0%
!!! TTTAAAATATTTTTTGTTAA+TGG - chr2_1:43870-43889 None:intergenic 5.0%
!! AATTATATACTTAAAAATTT+AGG + chr2_1:45577-45596 Msa0185820:intron 5.0%
AACAGCTTCAGCAGCAGTAG+TGG - chr2_1:37105-37124 None:intergenic 50.0%
!! TCCATCATGCATGATGGGCA+AGG - chr2_1:37216-37235 None:intergenic 50.0%
TGATTGTGAGCTAGGACTCG+CGG - chr2_1:37713-37732 None:intergenic 50.0%
AGAGGGGCTTCCATGTATAG+AGG + chr2_1:38866-38885 Msa0185820:CDS 50.0%
GCAGACACCATCAACATGGA+AGG + chr2_1:38989-39008 Msa0185820:intron 50.0%
GACACCATCAACATGGAAGG+TGG + chr2_1:38992-39011 Msa0185820:intron 50.0%
CTTGCCACCTTCCATGTTGA+TGG - chr2_1:38999-39018 None:intergenic 50.0%
GAAGGTGGCAAGCTCGAATA+GGG + chr2_1:39007-39026 Msa0185820:CDS 50.0%
! CTCCTGACCTTTTATAGCGG+GGG - chr2_1:39930-39949 None:intergenic 50.0%
! GCTCCTGACCTTTTATAGCG+GGG - chr2_1:39931-39950 None:intergenic 50.0%
! GGCTCCTGACCTTTTATAGC+GGG - chr2_1:39932-39951 None:intergenic 50.0%
! ACTTTTGTGCTCGTGTCAGC+AGG - chr2_1:41289-41308 None:intergenic 50.0%
!! AATGGAGTACAAGGGGTACC+AGG - chr2_1:41783-41802 None:intergenic 50.0%
GATGGATCTGTAGGCCCAAT+AGG + chr2_1:41841-41860 Msa0185820:intron 50.0%
CTGCATTGTGAAGGGGGATT+GGG - chr2_1:42350-42369 Msa0185830:CDS 50.0%
AACCTGGCTGCATTGTGAAG+GGG - chr2_1:42357-42376 Msa0185830:CDS 50.0%
GAACCTGGCTGCATTGTGAA+GGG - chr2_1:42358-42377 Msa0185830:CDS 50.0%
TGAACCTGGCTGCATTGTGA+AGG - chr2_1:42359-42378 Msa0185830:CDS 50.0%
TGCTTGCATCTTGGTGAACC+TGG - chr2_1:42373-42392 Msa0185830:CDS 50.0%
GTTTCAACAAGAAGCGGCAG+AGG - chr2_1:42668-42687 Msa0185830:CDS 50.0%
TTGAAACTTCTGCAACGCGC+TGG + chr2_1:42681-42700 Msa0185820:intron 50.0%
GTCGAGAGAAAGAAACGCAC+AGG + chr2_1:42799-42818 Msa0185820:intron 50.0%
ATACTGCAGATGGGGGGAAT+TGG - chr2_1:42831-42850 Msa0185830:CDS 50.0%
CTTGTGATACTGCAGATGGG+GGG - chr2_1:42837-42856 Msa0185830:CDS 50.0%
TTGTTGGTCCTAGTGGAGTC+GGG - chr2_1:42900-42919 Msa0185830:CDS 50.0%
GTTGTTGGTCCTAGTGGAGT+CGG - chr2_1:42901-42920 Msa0185830:CDS 50.0%
ACAGTGGTTGTTGGTCCTAG+TGG - chr2_1:42907-42926 Msa0185830:CDS 50.0%
ACAAACAGAGACAATGGCGG+CGG + chr2_1:44001-44020 Msa0185820:intron 50.0%
!!! GGGTTTTGGGTTCACGATTG+GGG + chr2_1:44194-44213 Msa0185820:intron 50.0%
ATCCAGGTAGGTGTGAGGTT+CGG + chr2_1:44222-44241 Msa0185820:intron 50.0%
! ATGAAGGAGTTCGGTGATGG+AGG + chr2_1:44308-44327 Msa0185820:intron 50.0%
CGTAAGTACTTCGTCGGTGA+TGG + chr2_1:44342-44361 Msa0185820:intron 50.0%
!! TCGTCGGTGATGGAGAAGTT+CGG + chr2_1:44352-44371 Msa0185820:intron 50.0%
! GTGATGGAGAAGTTCGGTGA+CGG + chr2_1:44358-44377 Msa0185820:intron 50.0%
ATTGTGCACGATGGAGAAGC+AGG + chr2_1:44392-44411 Msa0185820:intron 50.0%
!! TTGTTTTGTTCTGTGGGCCC+AGG + chr2_1:44467-44486 Msa0185820:intron 50.0%
GCGCACAAAGGGATTAACCT+GGG - chr2_1:44487-44506 None:intergenic 50.0%
!! GAAAGCGCTATTGTTGGAGG+GGG - chr2_1:44587-44606 None:intergenic 50.0%
TCAGCTACACAAGAGGAAGC+AGG + chr2_1:44840-44859 Msa0185820:intron 50.0%
CACGCAGCAAAAACAGACAG+TGG - chr2_1:45299-45318 None:intergenic 50.0%
!!! CACTGTCTGTTTTTGCTGCG+TGG + chr2_1:45297-45316 Msa0185820:intron 50.0%
! GCTTCAGCAGCAGTAGTGGA+AGG - chr2_1:37101-37120 None:intergenic 55.0%
GCTGCTGAAGCTGTTCCAAC+AGG + chr2_1:37110-37129 Msa0185820:CDS 55.0%
GCCTTGCCCATCATGCATGA+TGG + chr2_1:37212-37231 Msa0185820:CDS 55.0%
GGAAGGTGGCAAGCTCGAAT+AGG + chr2_1:39006-39025 Msa0185820:CDS 55.0%
GCTCGAATAGGGAGAGTTGC+TGG + chr2_1:39018-39037 Msa0185820:CDS 55.0%
AGCCCCCGCTATAAAAGGTC+AGG + chr2_1:39925-39944 Msa0185820:intron 55.0%
TGTGCTCGTGTCAGCAGGTA+TGG - chr2_1:41284-41303 None:intergenic 55.0%
GCTGCATTGTGAAGGGGGAT+TGG - chr2_1:42351-42370 Msa0185830:CDS 55.0%
ACCTGGCTGCATTGTGAAGG+GGG - chr2_1:42356-42375 Msa0185830:CDS 55.0%
CTAGACTTCCCGACTCCACT+AGG + chr2_1:42889-42908 Msa0185820:intron 55.0%
AAGGCTAGGTTTCGTGGCTG+GGG - chr2_1:43006-43025 Msa0185830:CDS 55.0%
GAAGGCTAGGTTTCGTGGCT+GGG - chr2_1:43007-43026 Msa0185830:CDS 55.0%
TCCTGGAAGGCTAGGTTTCG+TGG - chr2_1:43012-43031 Msa0185830:CDS 55.0%
CCATGGATTCCTGGAAGGCT+AGG - chr2_1:43020-43039 None:intergenic 55.0%
! CCTAGCCTTCCAGGAATCCA+TGG + chr2_1:43017-43036 Msa0185820:intron 55.0%
!! ATTGGGGTGTCGATCCAGGT+AGG + chr2_1:44210-44229 Msa0185820:intron 55.0%
TGTCGATCCAGGTAGGTGTG+AGG + chr2_1:44217-44236 Msa0185820:intron 55.0%
!! TGTGAGGTTCGGTGAGGAGA+AGG + chr2_1:44233-44252 Msa0185820:intron 55.0%
!! GTGAGGTTCGGTGAGGAGAA+GGG + chr2_1:44234-44253 Msa0185820:intron 55.0%
TCGGTGAGGAGAAGGGTTGA+TGG + chr2_1:44241-44260 Msa0185820:intron 55.0%
!! GGAGAAGGGTTGATGGTGTG+AGG + chr2_1:44248-44267 Msa0185820:intron 55.0%
!! AGGGTTGATGGTGTGAGGTG+AGG + chr2_1:44253-44272 Msa0185820:intron 55.0%
!! GGGTTGATGGTGTGAGGTGA+GGG + chr2_1:44254-44273 Msa0185820:intron 55.0%
TGGTGTGAGGTGAGGGTTCA+TGG + chr2_1:44261-44280 Msa0185820:intron 55.0%
!! TTCGGTGATGGAGGAGAAGC+AGG + chr2_1:44317-44336 Msa0185820:intron 55.0%
! ATGGAGAAGTTCGGTGACGG+AGG + chr2_1:44361-44380 Msa0185820:intron 55.0%
CGCGCACAAAGGGATTAACC+TGG - chr2_1:44488-44507 None:intergenic 55.0%
TACGAGCCTGTTGGGGAGTC+TGG + chr2_1:37480-37499 Msa0185820:CDS 60.0%
!! CCTTCAAGGAGCATCCGTCG+TGG - chr2_1:40860-40879 None:intergenic 60.0%
CCACGACGGATGCTCCTTGA+AGG + chr2_1:40857-40876 Msa0185820:intron 60.0%
TCCCCCTTCACAATGCAGCC+AGG + chr2_1:42352-42371 Msa0185820:intron 60.0%
GGAAGGCTAGGTTTCGTGGC+TGG - chr2_1:43008-43027 Msa0185830:CDS 60.0%
! GCCACGAAACCTAGCCTTCC+AGG + chr2_1:43008-43027 Msa0185820:intron 60.0%
AACAGAGACAATGGCGGCGG+CGG + chr2_1:44004-44023 Msa0185820:intron 60.0%
!! CACGATTGGGGTGTCGATCC+AGG + chr2_1:44206-44225 Msa0185820:intron 60.0%
CACCGAACCTCACACCTACC+TGG - chr2_1:44227-44246 None:intergenic 60.0%
!! GGTAGGTGTGAGGTTCGGTG+AGG + chr2_1:44227-44246 Msa0185820:intron 60.0%
GAGCCTGTTGGGGAGTCTGG+CGG + chr2_1:37483-37502 Msa0185820:CDS 65.0%
GACAACGGCGGCTACCACGA+CGG + chr2_1:40843-40862 Msa0185820:intron 65.0%
GCTCCGCCAGACTCCCCAAC+AGG - chr2_1:37489-37508 None:intergenic 70.0%
AGAGACAATGGCGGCGGCGG+CGG + chr2_1:44007-44026 Msa0185820:intron 70.0%
! GACAATGGCGGCGGCGGCGG+CGG + chr2_1:44010-44029 Msa0185820:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 37008 45988 37008 ID=Msa0185820;Name=Msa0185820
chr2_1 mRNA 37008 45988 37008 ID=Msa0185820-mRNA-1;Parent=Msa0185820;Name=Msa0185820-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.5|0.27|0.90|0.5|0.45|11|0|508
chr2_1 exon 37008 37248 37008 ID=Msa0185820-mRNA-1:exon:2;Parent=Msa0185820-mRNA-1
chr2_1 exon 37350 37597 37350 ID=Msa0185820-mRNA-1:exon:3;Parent=Msa0185820-mRNA-1
chr2_1 exon 37622 37868 37622 ID=Msa0185820-mRNA-1:exon:4;Parent=Msa0185820-mRNA-1
chr2_1 exon 38145 38213 38145 ID=Msa0185820-mRNA-1:exon:5;Parent=Msa0185820-mRNA-1
chr2_1 exon 38497 38585 38497 ID=Msa0185820-mRNA-1:exon:6;Parent=Msa0185820-mRNA-1
chr2_1 exon 38689 38762 38689 ID=Msa0185820-mRNA-1:exon:7;Parent=Msa0185820-mRNA-1
chr2_1 exon 38847 38897 38847 ID=Msa0185820-mRNA-1:exon:8;Parent=Msa0185820-mRNA-1
chr2_1 exon 38993 39069 38993 ID=Msa0185820-mRNA-1:exon:9;Parent=Msa0185820-mRNA-1
chr2_1 exon 44844 45073 44844 ID=Msa0185820-mRNA-1:exon:10;Parent=Msa0185820-mRNA-1
chr2_1 exon 45080 45270 45080 ID=Msa0185820-mRNA-1:exon:11;Parent=Msa0185820-mRNA-1
chr2_1 exon 45979 45988 45979 ID=Msa0185820-mRNA-1:exon:12;Parent=Msa0185820-mRNA-1
chr2_1 CDS 37008 37248 37008 ID=Msa0185820-mRNA-1:cds;Parent=Msa0185820-mRNA-1
chr2_1 CDS 37350 37597 37350 ID=Msa0185820-mRNA-1:cds;Parent=Msa0185820-mRNA-1
chr2_1 CDS 37622 37868 37622 ID=Msa0185820-mRNA-1:cds;Parent=Msa0185820-mRNA-1
chr2_1 CDS 38145 38213 38145 ID=Msa0185820-mRNA-1:cds;Parent=Msa0185820-mRNA-1
chr2_1 CDS 38497 38585 38497 ID=Msa0185820-mRNA-1:cds;Parent=Msa0185820-mRNA-1
chr2_1 CDS 38689 38762 38689 ID=Msa0185820-mRNA-1:cds;Parent=Msa0185820-mRNA-1
chr2_1 CDS 38847 38897 38847 ID=Msa0185820-mRNA-1:cds;Parent=Msa0185820-mRNA-1
chr2_1 CDS 38993 39069 38993 ID=Msa0185820-mRNA-1:cds;Parent=Msa0185820-mRNA-1
chr2_1 CDS 44844 45073 44844 ID=Msa0185820-mRNA-1:cds;Parent=Msa0185820-mRNA-1
chr2_1 CDS 45080 45270 45080 ID=Msa0185820-mRNA-1:cds;Parent=Msa0185820-mRNA-1
chr2_1 CDS 45979 45988 45979 ID=Msa0185820-mRNA-1:cds;Parent=Msa0185820-mRNA-1
Gene Sequence

>Msa0185820

ATGGAAAATATTGAGGATACCTTTAGCCTAAACAATCAAAATAGTAACATTTTTGGTTTATCTTTCTCTTCACAAATGAATATAGGTGCTCCTTCCACTACTGCTGCTGAAGCTGTTCCAACAGGCTTTTATTATCAACCTACACCTCTTCATAACTATGGATATTACTATGGTTATGAAAGTGAACATGTTGGATTGTATTCAGCCTTGCCCATCATGCATGATGGATCACAAGCACAAGCAATGGGAATCTCTCATTATGGATGCAGTACCAAAGAAGAAATGCAAGTAAGCATAGATAGTATTTTTAACAACCAAACTTCATACCATGAGCCAAACAATTTGAATAACCTAAATCATGTACAAGAGAATACGAGCCTGTTGGGGAGTCTGGCGGAGCACCAGAAGCAACAACTCTCATGTTACACCGTCTTAAGAAACGATAATGTGATCTTAGACGGGCCGACAAAATATCAGCTAGAAGATAATGATGAAATTTTTGATCTAAGGAGATGGGTATCAAGGGACTTTCATGCTGCTACTAGCCATGCACAAGTGTCAAATACACGTGTGTTGTCCGCGAGTCCTAGCTCACAATCAAGCTGTGTTACAAGTTCACAACAAACATCACCTATTGATTCTGCTTCCGTTGATACGATGAAAAGGAAGCATCAAATGGTGAACTTGAAAAAGAATCAGAACCAAACCTTTGGGCAAAGAACATCTCAATATAGAGGTAGATATGAAGCTCATCTATGGGATAACAGCTGTAAAAAAGAGGGCCAAGCTAGAAAAGGAAAGCAAGGAGGTTATGATATAGAAGAAAAAGCTGCAAGAGCTTATGATATGGCTGCACTCAAGTATTGGGGACCCTCCACTCGTATAAATTTTCCATTGGAAAATTATCAAAAGGAACTTGAGGAAATGAAGAAAATGACTAGACTAGAATACGTTGCTCATTTAAGAAGGAAAAGTAGTGGATTCTCAAGAGGGGCTTCCATGTATAGAGGAGTAACAAGACACCATCAACATGGAAGGTGGCAAGCTCGAATAGGGAGAGTTGCTGGAAATAAAGATCTCTATCTTGGAACTTTCACTACACAAGAGGAAGCAGGTGAAGCCTATGACATTGCTGCTATAAAATTCAGAGGAGCAAATGCTGTTACTAATTTTGATATAACAAAATATGACGTGGAGAAAATTATTTCAAGCCCTAACCTTCTTAGCAGTGAAGAAGCTAGGAGAAAATATGACGTGGAGAAAATGGATGATGTAATTAACAATAATAAACCATGTACGTTTGAAGACATGGAAGAAGCAATTCCAAAAAGATGCAAAATTCAACCATTCTCAATAAATAACATATATGATGAAGAAGAAGTAGAGGAATCAAATAGAGTGCATATGTCAAATCCTTCTTCAATTGTGACAAGTTTGAGCAGTTCAAGAGAAGAAAGCCCTGAAAACATGACAAGCTTACCAATGCTCTTTGGAATGACTTCAACAGCATCAATAATGAAGCATTAG
Protein sequence

>Msa0185820

MENIEDTFSLNNQNSNIFGLSFSSQMNIGAPSTTAAEAVPTGFYYQPTPLHNYGYYYGYESEHVGLYSALPIMHDGSQAQAMGISHYGCSTKEEMQVSIDSIFNNQTSYHEPNNLNNLNHVQENTSLLGSLAEHQKQQLSCYTVLRNDNVILDGPTKYQLEDNDEIFDLRRWVSRDFHAATSHAQVSNTRVLSASPSSQSSCVTSSQQTSPIDSASVDTMKRKHQMVNLKKNQNQTFGQRTSQYRGRYEAHLWDNSCKKEGQARKGKQGGYDIEEKAARAYDMAALKYWGPSTRINFPLENYQKELEEMKKMTRLEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFTTQEEAGEAYDIAAIKFRGANAVTNFDITKYDVEKIISSPNLLSSEEARRKYDVEKMDDVINNNKPCTFEDMEEAIPKRCKIQPFSINNIYDEEEVEESNRVHMSNPSSIVTSLSSSREESPENMTSLPMLFGMTSTASIMKH*