AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0186620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0186620 MtrunA17_Chr1g0152951 98.720 547 7 0 1 547 1 547 0.0 1095
Msa0186620 MtrunA17_Chr4g0053361 54.472 492 218 3 52 538 34 524 0.0 538
Msa0186620 MtrunA17_Chr2g0286991 28.541 466 251 16 59 449 5 463 1.76e-29 122
Msa0186620 MtrunA17_Chr2g0286991 26.171 363 224 12 98 453 245 570 1.49e-17 85.9
Msa0186620 MtrunA17_Chr4g0048391 23.061 490 246 18 57 443 19 480 2.12e-17 85.5
Msa0186620 MtrunA17_Chr7g0251831 24.390 492 259 17 61 446 1 485 5.88e-16 80.9
Msa0186620 MtrunA17_Chr1g0196061 21.756 501 256 17 64 446 14 496 1.66e-15 79.7
Msa0186620 MtrunA17_Chr1g0212071 24.471 425 230 13 66 455 23 391 4.63e-15 77.4
Msa0186620 MtrunA17_Chr4g0004901 26.923 260 181 6 187 443 365 618 5.54e-15 78.2
Msa0186620 MtrunA17_Chr4g0004901 29.600 250 168 6 134 381 389 632 6.16e-15 78.2
Msa0186620 MtrunA17_Chr4g0004901 26.265 415 227 13 103 450 146 548 1.25e-11 67.4
Msa0186620 MtrunA17_Chr8g0347711 25.272 368 218 13 61 383 12 367 3.53e-14 74.3
Msa0186620 MtrunA17_Chr4g0041191 24.520 469 247 16 54 470 3 416 6.12e-14 74.7
Msa0186620 MtrunA17_Chr1g0149351 24.012 329 206 12 134 450 224 520 7.19e-14 74.3
Msa0186620 MtrunA17_Chr1g0149351 30.370 135 66 3 320 453 177 284 9.13e-12 67.8
Msa0186620 MtrunA17_Chr3g0137771 37.143 140 82 4 320 453 143 282 7.11e-13 71.2
Msa0186620 MtrunA17_Chr3g0137771 22.179 514 259 15 61 434 68 580 1.34e-11 67.4
Msa0186620 MtrunA17_Chr3g0137771 30.052 193 98 7 294 453 200 388 3.48e-11 65.9
Msa0186620 MtrunA17_Chr1g0176031 27.668 253 159 9 120 361 77 316 1.06e-12 69.7
Msa0186620 MtrunA17_Chr7g0272131 26.149 348 215 13 138 453 197 534 3.01e-12 69.3
Msa0186620 MtrunA17_Chr4g0000931 28.179 291 158 11 64 341 40 292 9.88e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0186620 AT1G47056.1 66.116 484 158 4 55 536 34 513 0.0 626
Msa0186620 AT4G07400.1 61.154 520 185 6 14 531 35 539 0.0 605
Msa0186620 AT5G67250.1 55.985 543 209 6 1 538 1 518 0.0 552
Msa0186620 AT3G50080.1 56.790 486 200 6 56 538 36 514 0.0 530
Msa0186620 AT4G15475.1 29.394 330 211 13 127 447 274 590 6.21e-23 103
Msa0186620 AT4G15475.1 27.696 408 243 12 51 453 3 363 3.65e-22 100
Msa0186620 AT2G25490.1 26.107 429 273 16 61 453 64 484 4.91e-17 85.1
Msa0186620 AT2G25490.1 25.000 360 203 9 134 432 212 565 3.66e-14 75.9
Msa0186620 AT5G27920.1 27.019 359 213 13 137 459 158 503 7.71e-16 81.3
Msa0186620 AT5G27920.1 26.087 299 148 9 158 446 332 567 1.61e-11 67.4
Msa0186620 AT1G12820.1 24.590 427 252 13 61 443 1 401 9.96e-15 77.4
Msa0186620 AT5G01720.1 28.516 256 165 6 134 382 338 582 5.25e-14 75.5
Msa0186620 AT5G01720.1 23.780 492 264 17 64 452 16 499 4.54e-12 69.3
Msa0186620 AT5G23340.1 25.740 338 181 13 64 365 10 313 1.82e-13 72.8
Msa0186620 AT1G80570.2 23.448 435 267 15 55 453 8 412 2.50e-13 72.8
Msa0186620 AT3G26810.1 24.700 417 262 16 61 443 1 399 2.54e-13 73.2
Msa0186620 AT3G07550.1 24.451 364 217 14 61 377 15 367 5.18e-13 71.2
Msa0186620 AT3G07550.2 24.451 364 217 14 61 377 15 367 5.18e-13 71.2
Msa0186620 AT1G80570.1 24.242 429 259 17 61 453 1 399 8.72e-13 70.9
Msa0186620 AT1G80570.3 24.242 429 259 17 61 453 1 399 8.72e-13 70.9
Msa0186620 AT5G25350.1 32.653 196 89 7 294 453 180 368 4.81e-12 68.9
Msa0186620 AT4G03190.1 22.426 437 243 13 80 443 22 435 4.82e-11 65.9

Find 150 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCACCAATTCTTGCAAATT+AGG 0.147721 2_1:+1348145 None:intergenic
GACCTTCACTTTCACCAAAT+TGG 0.167556 2_1:+1347916 None:intergenic
TATTTCGAATTGTTCGAATT+TGG 0.247249 2_1:-1348320 Msa0186620:CDS
AGTTGTCCTGTTTCTGATCT+TGG 0.260446 2_1:-1347965 Msa0186620:CDS
AGGCTTCAGATTAGTGATAT+TGG 0.286479 2_1:-1348352 Msa0186620:CDS
TTGCAAGAATTGGTGCTTAT+TGG 0.291569 2_1:-1348139 Msa0186620:CDS
TCGTGTGGATCTTGTACTTT+TGG 0.297932 2_1:-1348676 Msa0186620:CDS
CTTTATAATGGACAGTGTTT+TGG 0.307331 2_1:-1348502 Msa0186620:CDS
ATCGGTTGCCTGCACTTTCC+CGG 0.307896 2_1:+1349184 None:intergenic
GACACCTGAGTGTACTGATA+TGG 0.308361 2_1:-1348278 Msa0186620:CDS
TGATCTTGGGATGGAAGCTT+TGG 0.309384 2_1:-1347951 Msa0186620:CDS
GCACCAATTCTTGCAAATTA+GGG 0.310819 2_1:+1348146 None:intergenic
GGCGGTGGATCTGTTGGTTT+TGG 0.323583 2_1:+1349158 None:intergenic
TTGCCCTAATTTGCAAGAAT+TGG 0.326430 2_1:-1348149 Msa0186620:CDS
CTGAAAGATGTAAGTTGTTA+AGG 0.328374 2_1:-1348240 Msa0186620:CDS
ACCTTCACTTTCACCAAATT+GGG 0.329278 2_1:+1347917 None:intergenic
GGCACATGGGTGTCCCAATT+TGG 0.331746 2_1:-1347930 Msa0186620:CDS
CTCAACCAATCCCCGCCTTC+AGG 0.338516 2_1:+1347872 None:intergenic
ATCAGTGTTCACTCGTTTGC+CGG 0.338793 2_1:-1348978 Msa0186620:CDS
TGTTTGAAGGAACTTTATAA+TGG 0.338946 2_1:-1348514 Msa0186620:CDS
TATTTCGATGTTCCGGTGAT+TGG 0.339573 2_1:-1348438 Msa0186620:CDS
CTAAGAATTGTAAGGGTTTG+AGG 0.347732 2_1:-1348705 Msa0186620:CDS
AATTGTCGGTGAAGCGGCTT+AGG 0.348422 2_1:-1348606 Msa0186620:CDS
GTTGTCCTGTTTCTGATCTT+GGG 0.350129 2_1:-1347964 Msa0186620:CDS
CGCGACACGCGCGGAGCTTA+AGG 0.354968 2_1:+1348758 None:intergenic
TTGCATTGCTGCAAAGTGTT+TGG 0.356470 2_1:-1348011 Msa0186620:CDS
CGCGAAGTTTGATCTTCTTC+CGG 0.356911 2_1:-1348908 Msa0186620:CDS
TTGAAGCTATTTCGATGTTC+CGG 0.378035 2_1:-1348445 Msa0186620:CDS
TAACCCAACGAGAGTGAGTT+TGG 0.378471 2_1:-1348113 Msa0186620:CDS
AGTTCATTCAAGCAAAGGTT+AGG 0.388373 2_1:-1347680 Msa0186620:CDS
AAAGCCAATCTCTCTAGATT+CGG 0.392075 2_1:+1348070 None:intergenic
GTTGAAGACGATTTGTTTGA+AGG 0.397116 2_1:-1348527 Msa0186620:CDS
TTAAGGAAGCTACATATTGA+TGG 0.408793 2_1:-1348223 Msa0186620:CDS
CGATGTAGATGCCGCGGAGC+CGG 0.410875 2_1:+1347736 None:intergenic
GCCGCGGAGCCGGGCATTGA+AGG 0.418437 2_1:+1347746 None:intergenic
ATTTCGATGTTCCGGTGATT+GGG 0.419025 2_1:-1348437 Msa0186620:CDS
GGTTTCCGTAGCTGTGAATC+TGG 0.427319 2_1:-1347840 Msa0186620:CDS
GGGATTGGTTGAGGCACACT+AGG 0.428246 2_1:-1347862 Msa0186620:CDS
ACTTTCCCGGCGGTTGGTTC+CGG 0.430973 2_1:+1349197 None:intergenic
CCGCGCGTGTCGCGAACTTA+CGG 0.432226 2_1:-1348749 Msa0186620:CDS
GATGTAGATGCCGCGGAGCC+GGG 0.436914 2_1:+1347737 None:intergenic
GCCTGCACTTTCCCGGCGGT+TGG 0.443897 2_1:+1349191 None:intergenic
GTTCACTCGTTTGCCGGCGG+TGG 0.448947 2_1:-1348972 Msa0186620:CDS
GGGATGGAAGCTTTGGCACA+TGG 0.450411 2_1:-1347944 Msa0186620:CDS
GCAAATCGGATTGGCGATGA+AGG 0.452211 2_1:-1348193 Msa0186620:CDS
TGGCTAGCACTTTGAGAAGA+TGG 0.454655 2_1:-1347634 Msa0186620:CDS
TTGCCCGAATCTAGAGAGAT+TGG 0.454730 2_1:-1348074 Msa0186620:CDS
TTAAACAGAGAAGGAATTAC+CGG 0.456733 2_1:+1348889 None:intergenic
CGGTGACGATGTTGCAGATC+CGG 0.458209 2_1:-1349106 Msa0186620:CDS
TCGTTACCGTCACCGTCAAC+CGG 0.458796 2_1:+1349087 None:intergenic
CGGCGGTGGCTTCACGTTGA+AGG 0.459312 2_1:-1348958 Msa0186620:CDS
TGTCGCGAACTTACGGATGC+TGG 0.459477 2_1:-1348742 Msa0186620:CDS
CGAACTTACGGATGCTGGAA+TGG 0.461081 2_1:-1348737 Msa0186620:CDS
CAAAGGTTAGGGCTACTGTC+CGG 0.463095 2_1:-1347668 Msa0186620:CDS
AGGTAGTTCTGATATATAAT+CGG 0.463807 2_1:+1349050 None:intergenic
AGCTTAAGGCGCGTGAGATT+AGG 0.464192 2_1:+1348772 None:intergenic
TCCTGTTTCTGATCTTGGGA+TGG 0.465939 2_1:-1347960 Msa0186620:CDS
TCCATCCCAAGATCAGAAAC+AGG 0.475671 2_1:+1347959 None:intergenic
AGTGAAGGTCAAGAAGTGTA+AGG 0.477496 2_1:-1347903 Msa0186620:CDS
CGCCGCGCTCGAGGAATTGT+CGG 0.479472 2_1:-1348620 Msa0186620:CDS
AAGCCAATCTCTCTAGATTC+GGG 0.481744 2_1:+1348071 None:intergenic
TTGATGGATGGAAGGCAAAT+CGG 0.482279 2_1:-1348207 Msa0186620:CDS
TTTCCAAACTCACTCTCGTT+GGG 0.487824 2_1:+1348110 None:intergenic
GATGGTGGAGCACAAGAGAA+TGG 0.489500 2_1:-1347779 Msa0186620:CDS
CGGTGACCGTGGAAGCTGCT+TGG 0.490935 2_1:+1349217 None:intergenic
GCGGCCACACCCGGTCCAAT+CGG 0.492352 2_1:+1348556 None:intergenic
TTACACCTGAAGGCGGGGAT+TGG 0.492516 2_1:-1347877 Msa0186620:CDS
GGTGGCTGAGCCGATTGGAC+CGG 0.494009 2_1:-1348566 Msa0186620:CDS
AAAGGTTAGGGCTACTGTCC+GGG 0.502510 2_1:-1347667 Msa0186620:CDS
CAAGCAGCTTCCACGGTCAC+CGG 0.502543 2_1:-1349216 Msa0186620:CDS
ACACCTGAGTGTACTGATAT+GGG 0.505583 2_1:-1348277 Msa0186620:CDS
ATTGAATTTCCTTCAATGCC+CGG 0.508171 2_1:-1347755 Msa0186620:CDS
ACCAACCGCCGGGAAAGTGC+AGG 0.508208 2_1:-1349192 Msa0186620:CDS
GATCGAGTTCATTCAAGCAA+AGG 0.510836 2_1:-1347685 Msa0186620:CDS
ATTTCCAAACTCACTCTCGT+TGG 0.512369 2_1:+1348109 None:intergenic
CTGAAGGCGGGGATTGGTTG+AGG 0.513919 2_1:-1347871 Msa0186620:CDS
GCAGCAATGCAAGATATCTC+AGG 0.514016 2_1:+1348022 None:intergenic
ATTGTCGGTGAAGCGGCTTA+GGG 0.516744 2_1:-1348605 Msa0186620:CDS
GAGAGTGAGTTTGGAAATGT+TGG 0.516798 2_1:-1348104 Msa0186620:CDS
CGGCTCCGCGGCATCTACAT+CGG 0.517144 2_1:-1347735 Msa0186620:CDS
AGCACTTTGAGAAGATGGTC+AGG 0.520658 2_1:-1347629 Msa0186620:CDS
CTCTTGTCTCTAACCATGAC+GGG 0.521217 2_1:+1347592 None:intergenic
CGGTCACCGGAACCAACCGC+CGG 0.521564 2_1:-1349203 Msa0186620:CDS
AACCAACAGATCCACCGCCT+TGG 0.526292 2_1:-1349154 Msa0186620:CDS
ATGGTGGAGCACAAGAGAAT+GGG 0.527565 2_1:-1347778 Msa0186620:CDS
ACAATCGCTAAACATTCATC+AGG 0.529545 2_1:+1349030 None:intergenic
ACTGCGGTGGCTGAGCCGAT+TGG 0.531430 2_1:-1348571 Msa0186620:CDS
AACCAAGGCGGTGGATCTGT+TGG 0.533705 2_1:+1349152 None:intergenic
AGGGTGTTACACCTGAAGGC+GGG 0.535285 2_1:-1347883 Msa0186620:CDS
GGTGACGGTAACGACGGAAT+CGG 0.538000 2_1:-1349078 Msa0186620:CDS
GATGGGCCAAGCAGCTTCCA+CGG 0.538513 2_1:-1349223 Msa0186620:CDS
TCCTTCAATGCCCGGCTCCG+CGG 0.540180 2_1:-1347747 Msa0186620:CDS
GGATGGAAGCTTTGGCACAT+GGG 0.540954 2_1:-1347943 Msa0186620:CDS
GGATGGAAGGCAAATCGGAT+TGG 0.542728 2_1:-1348202 Msa0186620:CDS
TGAAAATTGCGCCGCGCTCG+AGG 0.548189 2_1:-1348629 Msa0186620:CDS
GTTCATTCAAGCAAAGGTTA+GGG 0.551510 2_1:-1347679 Msa0186620:CDS
GTGGCTGAGCCGATTGGACC+GGG 0.559010 2_1:-1348565 Msa0186620:CDS
CATCGGAGAAACCAAGGCGG+TGG 0.561191 2_1:+1349143 None:intergenic
AACGACGCAGCGGCCACACC+CGG 0.561295 2_1:+1348547 None:intergenic
TCAAATCGATTAAACAGAGA+AGG 0.563215 2_1:+1348880 None:intergenic
CGTAGCTGTGAATCTGGACG+CGG 0.571152 2_1:-1347834 Msa0186620:CDS
GGTCACCGGAACCAACCGCC+GGG 0.573207 2_1:-1349202 Msa0186620:CDS
CTTCAACGTGAAGCCACCGC+CGG 0.574094 2_1:+1348959 None:intergenic
GGATTGGTTGAGGCACACTA+GGG 0.579593 2_1:-1347861 Msa0186620:CDS
CCGTAAGTTCGCGACACGCG+CGG 0.579903 2_1:+1348749 None:intergenic
TGAGCCGATTGGACCGGGTG+TGG 0.583172 2_1:-1348560 Msa0186620:CDS
CGCGTCCAGATTCACAGCTA+CGG 0.591102 2_1:+1347835 None:intergenic
GCAGATCCGGTTGACGGTGA+CGG 0.594512 2_1:-1349093 Msa0186620:CDS
TCGAGGAATTGTCGGTGAAG+CGG 0.594693 2_1:-1348612 Msa0186620:CDS
CCGTCGTCTGTGGAGATCAT+CGG 0.595495 2_1:+1349126 None:intergenic
AGTCGTTGAATCCCTCTGAT+CGG 0.596436 2_1:-1349002 Msa0186620:CDS
CACCGACAATTCCTCGAGCG+CGG 0.597818 2_1:+1348618 None:intergenic
GGAAGCTACATATTGATGGA+TGG 0.598307 2_1:-1348219 Msa0186620:CDS
GCTACATATTGATGGATGGA+AGG 0.601245 2_1:-1348215 Msa0186620:CDS
GCGGTTGGTTCCGGTGACCG+TGG 0.602758 2_1:+1349206 None:intergenic
TGAACACTGATTCCGATCAG+AGG 0.604053 2_1:+1348990 None:intergenic
TAGGGGAATTGCTGAGACTG+CGG 0.604704 2_1:-1348587 Msa0186620:CDS
GTGAAGGTCAAGAAGTGTAA+GGG 0.606922 2_1:-1347902 Msa0186620:CDS
TGTAAGGGTGTTACACCTGA+AGG 0.607758 2_1:-1347887 Msa0186620:CDS
GCTCTTGTCTCTAACCATGA+CGG 0.610454 2_1:+1347591 None:intergenic
GAACACTGATTCCGATCAGA+GGG 0.612028 2_1:+1348991 None:intergenic
GATGCTAGTGCTAGTGATGG+TGG 0.613432 2_1:-1347794 Msa0186620:CDS
TTGAAGGACAGAGTCGTCAA+CGG 0.623455 2_1:-1348942 Msa0186620:CDS
TTGTCGGTGAAGCGGCTTAG+GGG 0.627341 2_1:-1348604 Msa0186620:CDS
CAAATCGGATTGGCGATGAA+GGG 0.628264 2_1:-1348192 Msa0186620:CDS
AACATCGTCACCGTCGTCTG+TGG 0.629183 2_1:+1349116 None:intergenic
GGGTGTTACACCTGAAGGCG+GGG 0.630505 2_1:-1347882 Msa0186620:CDS
TGGCGATGAAGGGTTAATTG+CGG 0.631783 2_1:-1348182 Msa0186620:CDS
TCCCAATTTGGTGAAAGTGA+AGG 0.632374 2_1:-1347918 Msa0186620:CDS
TTGTGTGCAAGTGATACTGT+TGG 0.633448 2_1:-1348049 Msa0186620:CDS
AGTGTTCACTCGTTTGCCGG+CGG 0.634069 2_1:-1348975 Msa0186620:CDS
GATGTTGCAGATCCGGTTGA+CGG 0.647651 2_1:-1349099 Msa0186620:CDS
GGGAATTGCTGAGACTGCGG+TGG 0.651918 2_1:-1348584 Msa0186620:CDS
GGAGATCATCGGAGAAACCA+AGG 0.659542 2_1:+1349137 None:intergenic
ATTTGCCGATGTAGATGCCG+CGG 0.660814 2_1:+1347730 None:intergenic
GGTAGCACTAGTGCCCGTCA+TGG 0.661122 2_1:-1347605 Msa0186620:CDS
CCGATGATCTCCACAGACGA+CGG 0.673550 2_1:-1349126 Msa0186620:CDS
CAAGATGCTAGTGCTAGTGA+TGG 0.682263 2_1:-1347797 Msa0186620:CDS
GGTTTGAGGAAATTATCGTG+TGG 0.686243 2_1:-1348691 Msa0186620:CDS
AGTGTCGAGTATGATTGTTG+AGG 0.687601 2_1:-1348386 Msa0186620:CDS
AAGGGTGTTACACCTGAAGG+CGG 0.687864 2_1:-1347884 Msa0186620:CDS
ACTGTCCGGGAGGAAAATTG+TGG 0.692257 2_1:-1347654 Msa0186620:CDS
ACTTTGAGAAGATGGTCAGG+TGG 0.698161 2_1:-1347626 Msa0186620:CDS
GTTGACGGTGACGGTAACGA+CGG 0.702577 2_1:-1349084 Msa0186620:CDS
AATCGTCTTCAACGACGCAG+CGG 0.706961 2_1:+1348537 None:intergenic
GGTTGCCTGCACTTTCCCGG+CGG 0.709663 2_1:+1349187 None:intergenic
GGTTAGGGCTACTGTCCGGG+AGG 0.714520 2_1:-1347664 Msa0186620:CDS
AGTCCCATATCAGTACACTC+AGG 0.721622 2_1:+1348274 None:intergenic
TGGATCTAAAGGTATGAACG+CGG 0.726086 2_1:-1348656 Msa0186620:CDS
GATCATCGGAGAAACCAAGG+CGG 0.832722 2_1:+1349140 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGGTAGTTCTGATATATAAT+CGG + chr2_1:1347776-1347795 None:intergenic 25.0%
! TGTTTGAAGGAACTTTATAA+TGG - chr2_1:1348309-1348328 Msa0186620:CDS 25.0%
! TATTTCGAATTGTTCGAATT+TGG - chr2_1:1348503-1348522 Msa0186620:CDS 25.0%
!!! AGGTAGTTCTGATATATAAT+CGG + chr2_1:1347776-1347795 None:intergenic 25.0%
! TGTTTGAAGGAACTTTATAA+TGG - chr2_1:1348309-1348328 Msa0186620:CDS 25.0%
! TATTTCGAATTGTTCGAATT+TGG - chr2_1:1348503-1348522 Msa0186620:CDS 25.0%
TTAAACAGAGAAGGAATTAC+CGG + chr2_1:1347937-1347956 None:intergenic 30.0%
TCAAATCGATTAAACAGAGA+AGG + chr2_1:1347946-1347965 None:intergenic 30.0%
! AGCTTTTGCTAAGAATTGTA+AGG - chr2_1:1348110-1348129 Msa0186620:CDS 30.0%
! GCTTTTGCTAAGAATTGTAA+GGG - chr2_1:1348111-1348130 Msa0186620:CDS 30.0%
! TCTTGTACTTTTGGATCTAA+AGG - chr2_1:1348156-1348175 Msa0186620:CDS 30.0%
!!! CTTTATAATGGACAGTGTTT+TGG - chr2_1:1348321-1348340 Msa0186620:CDS 30.0%
!!! TGTTTTGGTTCGTTGATTTT+AGG - chr2_1:1348336-1348355 Msa0186620:CDS 30.0%
CTGAAAGATGTAAGTTGTTA+AGG - chr2_1:1348583-1348602 Msa0186620:CDS 30.0%
TTAAGGAAGCTACATATTGA+TGG - chr2_1:1348600-1348619 Msa0186620:CDS 30.0%
TTAAACAGAGAAGGAATTAC+CGG + chr2_1:1347937-1347956 None:intergenic 30.0%
TCAAATCGATTAAACAGAGA+AGG + chr2_1:1347946-1347965 None:intergenic 30.0%
! AGCTTTTGCTAAGAATTGTA+AGG - chr2_1:1348110-1348129 Msa0186620:CDS 30.0%
! GCTTTTGCTAAGAATTGTAA+GGG - chr2_1:1348111-1348130 Msa0186620:CDS 30.0%
! TCTTGTACTTTTGGATCTAA+AGG - chr2_1:1348156-1348175 Msa0186620:CDS 30.0%
!!! CTTTATAATGGACAGTGTTT+TGG - chr2_1:1348321-1348340 Msa0186620:CDS 30.0%
!!! TGTTTTGGTTCGTTGATTTT+AGG - chr2_1:1348336-1348355 Msa0186620:CDS 30.0%
CTGAAAGATGTAAGTTGTTA+AGG - chr2_1:1348583-1348602 Msa0186620:CDS 30.0%
TTAAGGAAGCTACATATTGA+TGG - chr2_1:1348600-1348619 Msa0186620:CDS 30.0%
!!! ATCTGTTGGTTTTGGTAGAT+CGG + chr2_1:1347660-1347679 None:intergenic 35.0%
ACAATCGCTAAACATTCATC+AGG + chr2_1:1347796-1347815 None:intergenic 35.0%
CTAAGAATTGTAAGGGTTTG+AGG - chr2_1:1348118-1348137 Msa0186620:CDS 35.0%
! GTTGAAGACGATTTGTTTGA+AGG - chr2_1:1348296-1348315 Msa0186620:CDS 35.0%
! TTGAAGCTATTTCGATGTTC+CGG - chr2_1:1348378-1348397 Msa0186620:CDS 35.0%
!! GGATACGCTTTTTACACTTA+TGG - chr2_1:1348407-1348426 Msa0186620:CDS 35.0%
! TTGTTGAGGTTCATTTTGAG+AGG - chr2_1:1348451-1348470 Msa0186620:CDS 35.0%
AGGCTTCAGATTAGTGATAT+TGG - chr2_1:1348471-1348490 Msa0186620:CDS 35.0%
! TTGCCCTAATTTGCAAGAAT+TGG - chr2_1:1348674-1348693 Msa0186620:CDS 35.0%
GCACCAATTCTTGCAAATTA+GGG + chr2_1:1348680-1348699 None:intergenic 35.0%
AGCACCAATTCTTGCAAATT+AGG + chr2_1:1348681-1348700 None:intergenic 35.0%
! TTGCAAGAATTGGTGCTTAT+TGG - chr2_1:1348684-1348703 Msa0186620:CDS 35.0%
AAAGCCAATCTCTCTAGATT+CGG + chr2_1:1348756-1348775 None:intergenic 35.0%
ACCTTCACTTTCACCAAATT+GGG + chr2_1:1348909-1348928 None:intergenic 35.0%
ATTGAATTTCCTTCAATGCC+CGG - chr2_1:1349068-1349087 Msa0186620:CDS 35.0%
AGTTCATTCAAGCAAAGGTT+AGG - chr2_1:1349143-1349162 Msa0186620:CDS 35.0%
GTTCATTCAAGCAAAGGTTA+GGG - chr2_1:1349144-1349163 Msa0186620:CDS 35.0%
!!! ATCTGTTGGTTTTGGTAGAT+CGG + chr2_1:1347660-1347679 None:intergenic 35.0%
ACAATCGCTAAACATTCATC+AGG + chr2_1:1347796-1347815 None:intergenic 35.0%
CTAAGAATTGTAAGGGTTTG+AGG - chr2_1:1348118-1348137 Msa0186620:CDS 35.0%
! GTTGAAGACGATTTGTTTGA+AGG - chr2_1:1348296-1348315 Msa0186620:CDS 35.0%
! TTGAAGCTATTTCGATGTTC+CGG - chr2_1:1348378-1348397 Msa0186620:CDS 35.0%
!! GGATACGCTTTTTACACTTA+TGG - chr2_1:1348407-1348426 Msa0186620:CDS 35.0%
! TTGTTGAGGTTCATTTTGAG+AGG - chr2_1:1348451-1348470 Msa0186620:CDS 35.0%
AGGCTTCAGATTAGTGATAT+TGG - chr2_1:1348471-1348490 Msa0186620:CDS 35.0%
! TTGCCCTAATTTGCAAGAAT+TGG - chr2_1:1348674-1348693 Msa0186620:CDS 35.0%
GCACCAATTCTTGCAAATTA+GGG + chr2_1:1348680-1348699 None:intergenic 35.0%
AGCACCAATTCTTGCAAATT+AGG + chr2_1:1348681-1348700 None:intergenic 35.0%
! TTGCAAGAATTGGTGCTTAT+TGG - chr2_1:1348684-1348703 Msa0186620:CDS 35.0%
AAAGCCAATCTCTCTAGATT+CGG + chr2_1:1348756-1348775 None:intergenic 35.0%
ACCTTCACTTTCACCAAATT+GGG + chr2_1:1348909-1348928 None:intergenic 35.0%
ATTGAATTTCCTTCAATGCC+CGG - chr2_1:1349068-1349087 Msa0186620:CDS 35.0%
AGTTCATTCAAGCAAAGGTT+AGG - chr2_1:1349143-1349162 Msa0186620:CDS 35.0%
GTTCATTCAAGCAAAGGTTA+GGG - chr2_1:1349144-1349163 Msa0186620:CDS 35.0%
GGTTTGAGGAAATTATCGTG+TGG - chr2_1:1348132-1348151 Msa0186620:CDS 40.0%
! TCGTGTGGATCTTGTACTTT+TGG - chr2_1:1348147-1348166 Msa0186620:CDS 40.0%
! TGGATCTAAAGGTATGAACG+CGG - chr2_1:1348167-1348186 Msa0186620:CDS 40.0%
TATTTCGATGTTCCGGTGAT+TGG - chr2_1:1348385-1348404 Msa0186620:CDS 40.0%
ATTTCGATGTTCCGGTGATT+GGG - chr2_1:1348386-1348405 Msa0186620:CDS 40.0%
! AAAAAGCGTATCCCAATCAC+CGG + chr2_1:1348400-1348419 None:intergenic 40.0%
! AGTGTCGAGTATGATTGTTG+AGG - chr2_1:1348437-1348456 Msa0186620:CDS 40.0%
! ACACCTGAGTGTACTGATAT+GGG - chr2_1:1348546-1348565 Msa0186620:CDS 40.0%
GGAAGCTACATATTGATGGA+TGG - chr2_1:1348604-1348623 Msa0186620:CDS 40.0%
! GCTACATATTGATGGATGGA+AGG - chr2_1:1348608-1348627 Msa0186620:CDS 40.0%
! TTGATGGATGGAAGGCAAAT+CGG - chr2_1:1348616-1348635 Msa0186620:CDS 40.0%
TTTCCAAACTCACTCTCGTT+GGG + chr2_1:1348716-1348735 None:intergenic 40.0%
ATTTCCAAACTCACTCTCGT+TGG + chr2_1:1348717-1348736 None:intergenic 40.0%
GAGAGTGAGTTTGGAAATGT+TGG - chr2_1:1348719-1348738 Msa0186620:CDS 40.0%
AAGCCAATCTCTCTAGATTC+GGG + chr2_1:1348755-1348774 None:intergenic 40.0%
TTGTGTGCAAGTGATACTGT+TGG - chr2_1:1348774-1348793 Msa0186620:CDS 40.0%
! TTGCATTGCTGCAAAGTGTT+TGG - chr2_1:1348812-1348831 Msa0186620:CDS 40.0%
!! AGTTGTCCTGTTTCTGATCT+TGG - chr2_1:1348858-1348877 Msa0186620:CDS 40.0%
!! GTTGTCCTGTTTCTGATCTT+GGG - chr2_1:1348859-1348878 Msa0186620:CDS 40.0%
! TCCCAATTTGGTGAAAGTGA+AGG - chr2_1:1348905-1348924 Msa0186620:CDS 40.0%
GACCTTCACTTTCACCAAAT+TGG + chr2_1:1348910-1348929 None:intergenic 40.0%
! AGTGAAGGTCAAGAAGTGTA+AGG - chr2_1:1348920-1348939 Msa0186620:CDS 40.0%
! GTGAAGGTCAAGAAGTGTAA+GGG - chr2_1:1348921-1348940 Msa0186620:CDS 40.0%
GATCGAGTTCATTCAAGCAA+AGG - chr2_1:1349138-1349157 Msa0186620:CDS 40.0%
GGTTTGAGGAAATTATCGTG+TGG - chr2_1:1348132-1348151 Msa0186620:CDS 40.0%
! TCGTGTGGATCTTGTACTTT+TGG - chr2_1:1348147-1348166 Msa0186620:CDS 40.0%
! TGGATCTAAAGGTATGAACG+CGG - chr2_1:1348167-1348186 Msa0186620:CDS 40.0%
TATTTCGATGTTCCGGTGAT+TGG - chr2_1:1348385-1348404 Msa0186620:CDS 40.0%
ATTTCGATGTTCCGGTGATT+GGG - chr2_1:1348386-1348405 Msa0186620:CDS 40.0%
! AAAAAGCGTATCCCAATCAC+CGG + chr2_1:1348400-1348419 None:intergenic 40.0%
! AGTGTCGAGTATGATTGTTG+AGG - chr2_1:1348437-1348456 Msa0186620:CDS 40.0%
! ACACCTGAGTGTACTGATAT+GGG - chr2_1:1348546-1348565 Msa0186620:CDS 40.0%
GGAAGCTACATATTGATGGA+TGG - chr2_1:1348604-1348623 Msa0186620:CDS 40.0%
! GCTACATATTGATGGATGGA+AGG - chr2_1:1348608-1348627 Msa0186620:CDS 40.0%
! TTGATGGATGGAAGGCAAAT+CGG - chr2_1:1348616-1348635 Msa0186620:CDS 40.0%
TTTCCAAACTCACTCTCGTT+GGG + chr2_1:1348716-1348735 None:intergenic 40.0%
ATTTCCAAACTCACTCTCGT+TGG + chr2_1:1348717-1348736 None:intergenic 40.0%
GAGAGTGAGTTTGGAAATGT+TGG - chr2_1:1348719-1348738 Msa0186620:CDS 40.0%
AAGCCAATCTCTCTAGATTC+GGG + chr2_1:1348755-1348774 None:intergenic 40.0%
TTGTGTGCAAGTGATACTGT+TGG - chr2_1:1348774-1348793 Msa0186620:CDS 40.0%
! TTGCATTGCTGCAAAGTGTT+TGG - chr2_1:1348812-1348831 Msa0186620:CDS 40.0%
!! AGTTGTCCTGTTTCTGATCT+TGG - chr2_1:1348858-1348877 Msa0186620:CDS 40.0%
!! GTTGTCCTGTTTCTGATCTT+GGG - chr2_1:1348859-1348878 Msa0186620:CDS 40.0%
! TCCCAATTTGGTGAAAGTGA+AGG - chr2_1:1348905-1348924 Msa0186620:CDS 40.0%
GACCTTCACTTTCACCAAAT+TGG + chr2_1:1348910-1348929 None:intergenic 40.0%
! AGTGAAGGTCAAGAAGTGTA+AGG - chr2_1:1348920-1348939 Msa0186620:CDS 40.0%
! GTGAAGGTCAAGAAGTGTAA+GGG - chr2_1:1348921-1348940 Msa0186620:CDS 40.0%
GATCGAGTTCATTCAAGCAA+AGG - chr2_1:1349138-1349157 Msa0186620:CDS 40.0%
AGTCGTTGAATCCCTCTGAT+CGG - chr2_1:1347821-1347840 Msa0186620:CDS 45.0%
!! GAACACTGATTCCGATCAGA+GGG + chr2_1:1347835-1347854 None:intergenic 45.0%
!! TGAACACTGATTCCGATCAG+AGG + chr2_1:1347836-1347855 None:intergenic 45.0%
ATCAGTGTTCACTCGTTTGC+CGG - chr2_1:1347845-1347864 Msa0186620:CDS 45.0%
TTGAAGGACAGAGTCGTCAA+CGG - chr2_1:1347881-1347900 Msa0186620:CDS 45.0%
CGCGAAGTTTGATCTTCTTC+CGG - chr2_1:1347915-1347934 Msa0186620:CDS 45.0%
! GACACCTGAGTGTACTGATA+TGG - chr2_1:1348545-1348564 Msa0186620:CDS 45.0%
AGTCCCATATCAGTACACTC+AGG + chr2_1:1348552-1348571 None:intergenic 45.0%
!! CAAATCGGATTGGCGATGAA+GGG - chr2_1:1348631-1348650 Msa0186620:CDS 45.0%
TGGCGATGAAGGGTTAATTG+CGG - chr2_1:1348641-1348660 Msa0186620:CDS 45.0%
TAACCCAACGAGAGTGAGTT+TGG - chr2_1:1348710-1348729 Msa0186620:CDS 45.0%
TTGCCCGAATCTAGAGAGAT+TGG - chr2_1:1348749-1348768 Msa0186620:CDS 45.0%
GCAGCAATGCAAGATATCTC+AGG + chr2_1:1348804-1348823 None:intergenic 45.0%
!! TCCTGTTTCTGATCTTGGGA+TGG - chr2_1:1348863-1348882 Msa0186620:CDS 45.0%
TCCATCCCAAGATCAGAAAC+AGG + chr2_1:1348867-1348886 None:intergenic 45.0%
TGATCTTGGGATGGAAGCTT+TGG - chr2_1:1348872-1348891 Msa0186620:CDS 45.0%
!! TGTAAGGGTGTTACACCTGA+AGG - chr2_1:1348936-1348955 Msa0186620:CDS 45.0%
CAAGATGCTAGTGCTAGTGA+TGG - chr2_1:1349026-1349045 Msa0186620:CDS 45.0%
! ATGGTGGAGCACAAGAGAAT+GGG - chr2_1:1349045-1349064 Msa0186620:CDS 45.0%
! TGGCTAGCACTTTGAGAAGA+TGG - chr2_1:1349189-1349208 Msa0186620:CDS 45.0%
! AGCACTTTGAGAAGATGGTC+AGG - chr2_1:1349194-1349213 Msa0186620:CDS 45.0%
! ACTTTGAGAAGATGGTCAGG+TGG - chr2_1:1349197-1349216 Msa0186620:CDS 45.0%
AGTCGTTGAATCCCTCTGAT+CGG - chr2_1:1347821-1347840 Msa0186620:CDS 45.0%
!! GAACACTGATTCCGATCAGA+GGG + chr2_1:1347835-1347854 None:intergenic 45.0%
!! TGAACACTGATTCCGATCAG+AGG + chr2_1:1347836-1347855 None:intergenic 45.0%
ATCAGTGTTCACTCGTTTGC+CGG - chr2_1:1347845-1347864 Msa0186620:CDS 45.0%
TTGAAGGACAGAGTCGTCAA+CGG - chr2_1:1347881-1347900 Msa0186620:CDS 45.0%
CGCGAAGTTTGATCTTCTTC+CGG - chr2_1:1347915-1347934 Msa0186620:CDS 45.0%
! GACACCTGAGTGTACTGATA+TGG - chr2_1:1348545-1348564 Msa0186620:CDS 45.0%
AGTCCCATATCAGTACACTC+AGG + chr2_1:1348552-1348571 None:intergenic 45.0%
!! CAAATCGGATTGGCGATGAA+GGG - chr2_1:1348631-1348650 Msa0186620:CDS 45.0%
TGGCGATGAAGGGTTAATTG+CGG - chr2_1:1348641-1348660 Msa0186620:CDS 45.0%
TAACCCAACGAGAGTGAGTT+TGG - chr2_1:1348710-1348729 Msa0186620:CDS 45.0%
TTGCCCGAATCTAGAGAGAT+TGG - chr2_1:1348749-1348768 Msa0186620:CDS 45.0%
GCAGCAATGCAAGATATCTC+AGG + chr2_1:1348804-1348823 None:intergenic 45.0%
!! TCCTGTTTCTGATCTTGGGA+TGG - chr2_1:1348863-1348882 Msa0186620:CDS 45.0%
TCCATCCCAAGATCAGAAAC+AGG + chr2_1:1348867-1348886 None:intergenic 45.0%
TGATCTTGGGATGGAAGCTT+TGG - chr2_1:1348872-1348891 Msa0186620:CDS 45.0%
!! TGTAAGGGTGTTACACCTGA+AGG - chr2_1:1348936-1348955 Msa0186620:CDS 45.0%
CAAGATGCTAGTGCTAGTGA+TGG - chr2_1:1349026-1349045 Msa0186620:CDS 45.0%
! ATGGTGGAGCACAAGAGAAT+GGG - chr2_1:1349045-1349064 Msa0186620:CDS 45.0%
! TGGCTAGCACTTTGAGAAGA+TGG - chr2_1:1349189-1349208 Msa0186620:CDS 45.0%
! AGCACTTTGAGAAGATGGTC+AGG - chr2_1:1349194-1349213 Msa0186620:CDS 45.0%
! ACTTTGAGAAGATGGTCAGG+TGG - chr2_1:1349197-1349216 Msa0186620:CDS 45.0%
GATCATCGGAGAAACCAAGG+CGG + chr2_1:1347686-1347705 None:intergenic 50.0%
GGAGATCATCGGAGAAACCA+AGG + chr2_1:1347689-1347708 None:intergenic 50.0%
GATGTTGCAGATCCGGTTGA+CGG - chr2_1:1347724-1347743 Msa0186620:CDS 50.0%
AGCTTAAGGCGCGTGAGATT+AGG + chr2_1:1348054-1348073 None:intergenic 50.0%
CGAACTTACGGATGCTGGAA+TGG - chr2_1:1348086-1348105 Msa0186620:CDS 50.0%
TCGAGGAATTGTCGGTGAAG+CGG - chr2_1:1348211-1348230 Msa0186620:CDS 50.0%
AATTGTCGGTGAAGCGGCTT+AGG - chr2_1:1348217-1348236 Msa0186620:CDS 50.0%
ATTGTCGGTGAAGCGGCTTA+GGG - chr2_1:1348218-1348237 Msa0186620:CDS 50.0%
TAGGGGAATTGCTGAGACTG+CGG - chr2_1:1348236-1348255 Msa0186620:CDS 50.0%
AATCGTCTTCAACGACGCAG+CGG + chr2_1:1348289-1348308 None:intergenic 50.0%
GGATGGAAGGCAAATCGGAT+TGG - chr2_1:1348621-1348640 Msa0186620:CDS 50.0%
!! GCAAATCGGATTGGCGATGA+AGG - chr2_1:1348630-1348649 Msa0186620:CDS 50.0%
! GGATGGAAGCTTTGGCACAT+GGG - chr2_1:1348880-1348899 Msa0186620:CDS 50.0%
!! AAGGGTGTTACACCTGAAGG+CGG - chr2_1:1348939-1348958 Msa0186620:CDS 50.0%
!! GGATTGGTTGAGGCACACTA+GGG - chr2_1:1348962-1348981 Msa0186620:CDS 50.0%
GGTTTCCGTAGCTGTGAATC+TGG - chr2_1:1348983-1349002 Msa0186620:CDS 50.0%
GATGCTAGTGCTAGTGATGG+TGG - chr2_1:1349029-1349048 Msa0186620:CDS 50.0%
!! GATGGTGGAGCACAAGAGAA+TGG - chr2_1:1349044-1349063 Msa0186620:CDS 50.0%
ATTTGCCGATGTAGATGCCG+CGG + chr2_1:1349096-1349115 None:intergenic 50.0%
CAAAGGTTAGGGCTACTGTC+CGG - chr2_1:1349155-1349174 Msa0186620:CDS 50.0%
AAAGGTTAGGGCTACTGTCC+GGG - chr2_1:1349156-1349175 Msa0186620:CDS 50.0%
ACTGTCCGGGAGGAAAATTG+TGG - chr2_1:1349169-1349188 Msa0186620:CDS 50.0%
! GCTAGCCACAATTTTCCTCC+CGG + chr2_1:1349177-1349196 None:intergenic 50.0%
GATCATCGGAGAAACCAAGG+CGG + chr2_1:1347686-1347705 None:intergenic 50.0%
GGAGATCATCGGAGAAACCA+AGG + chr2_1:1347689-1347708 None:intergenic 50.0%
GATGTTGCAGATCCGGTTGA+CGG - chr2_1:1347724-1347743 Msa0186620:CDS 50.0%
AGCTTAAGGCGCGTGAGATT+AGG + chr2_1:1348054-1348073 None:intergenic 50.0%
CGAACTTACGGATGCTGGAA+TGG - chr2_1:1348086-1348105 Msa0186620:CDS 50.0%
TCGAGGAATTGTCGGTGAAG+CGG - chr2_1:1348211-1348230 Msa0186620:CDS 50.0%
AATTGTCGGTGAAGCGGCTT+AGG - chr2_1:1348217-1348236 Msa0186620:CDS 50.0%
ATTGTCGGTGAAGCGGCTTA+GGG - chr2_1:1348218-1348237 Msa0186620:CDS 50.0%
TAGGGGAATTGCTGAGACTG+CGG - chr2_1:1348236-1348255 Msa0186620:CDS 50.0%
AATCGTCTTCAACGACGCAG+CGG + chr2_1:1348289-1348308 None:intergenic 50.0%
GGATGGAAGGCAAATCGGAT+TGG - chr2_1:1348621-1348640 Msa0186620:CDS 50.0%
!! GCAAATCGGATTGGCGATGA+AGG - chr2_1:1348630-1348649 Msa0186620:CDS 50.0%
! GGATGGAAGCTTTGGCACAT+GGG - chr2_1:1348880-1348899 Msa0186620:CDS 50.0%
!! AAGGGTGTTACACCTGAAGG+CGG - chr2_1:1348939-1348958 Msa0186620:CDS 50.0%
!! GGATTGGTTGAGGCACACTA+GGG - chr2_1:1348962-1348981 Msa0186620:CDS 50.0%
GGTTTCCGTAGCTGTGAATC+TGG - chr2_1:1348983-1349002 Msa0186620:CDS 50.0%
GATGCTAGTGCTAGTGATGG+TGG - chr2_1:1349029-1349048 Msa0186620:CDS 50.0%
!! GATGGTGGAGCACAAGAGAA+TGG - chr2_1:1349044-1349063 Msa0186620:CDS 50.0%
ATTTGCCGATGTAGATGCCG+CGG + chr2_1:1349096-1349115 None:intergenic 50.0%
CAAAGGTTAGGGCTACTGTC+CGG - chr2_1:1349155-1349174 Msa0186620:CDS 50.0%
AAAGGTTAGGGCTACTGTCC+GGG - chr2_1:1349156-1349175 Msa0186620:CDS 50.0%
ACTGTCCGGGAGGAAAATTG+TGG - chr2_1:1349169-1349188 Msa0186620:CDS 50.0%
! GCTAGCCACAATTTTCCTCC+CGG + chr2_1:1349177-1349196 None:intergenic 50.0%
ATCGGTTGCCTGCACTTTCC+CGG + chr2_1:1347642-1347661 None:intergenic 55.0%
!!! GGCGGTGGATCTGTTGGTTT+TGG + chr2_1:1347668-1347687 None:intergenic 55.0%
AACCAACAGATCCACCGCCT+TGG - chr2_1:1347669-1347688 Msa0186620:CDS 55.0%
AACCAAGGCGGTGGATCTGT+TGG + chr2_1:1347674-1347693 None:intergenic 55.0%
CCGTCGTCTGTGGAGATCAT+CGG + chr2_1:1347700-1347719 None:intergenic 55.0%
CCGATGATCTCCACAGACGA+CGG - chr2_1:1347697-1347716 Msa0186620:CDS 55.0%
AACATCGTCACCGTCGTCTG+TGG + chr2_1:1347710-1347729 None:intergenic 55.0%
CGGTGACGATGTTGCAGATC+CGG - chr2_1:1347717-1347736 Msa0186620:CDS 55.0%
TCGTTACCGTCACCGTCAAC+CGG + chr2_1:1347739-1347758 None:intergenic 55.0%
! GTTGACGGTGACGGTAACGA+CGG - chr2_1:1347739-1347758 Msa0186620:CDS 55.0%
! GGTGACGGTAACGACGGAAT+CGG - chr2_1:1347745-1347764 Msa0186620:CDS 55.0%
AGTGTTCACTCGTTTGCCGG+CGG - chr2_1:1347848-1347867 Msa0186620:CDS 55.0%
TGTCGCGAACTTACGGATGC+TGG - chr2_1:1348081-1348100 Msa0186620:CDS 55.0%
TTGTCGGTGAAGCGGCTTAG+GGG - chr2_1:1348219-1348238 Msa0186620:CDS 55.0%
! GGGATGGAAGCTTTGGCACA+TGG - chr2_1:1348879-1348898 Msa0186620:CDS 55.0%
GGCACATGGGTGTCCCAATT+TGG - chr2_1:1348893-1348912 Msa0186620:CDS 55.0%
! AGGGTGTTACACCTGAAGGC+GGG - chr2_1:1348940-1348959 Msa0186620:CDS 55.0%
TTACACCTGAAGGCGGGGAT+TGG - chr2_1:1348946-1348965 Msa0186620:CDS 55.0%
!! GGGATTGGTTGAGGCACACT+AGG - chr2_1:1348961-1348980 Msa0186620:CDS 55.0%
CGCGTCCAGATTCACAGCTA+CGG + chr2_1:1348991-1349010 None:intergenic 55.0%
CGTAGCTGTGAATCTGGACG+CGG - chr2_1:1348989-1349008 Msa0186620:CDS 55.0%
ATCGGTTGCCTGCACTTTCC+CGG + chr2_1:1347642-1347661 None:intergenic 55.0%
!!! GGCGGTGGATCTGTTGGTTT+TGG + chr2_1:1347668-1347687 None:intergenic 55.0%
AACCAACAGATCCACCGCCT+TGG - chr2_1:1347669-1347688 Msa0186620:CDS 55.0%
AACCAAGGCGGTGGATCTGT+TGG + chr2_1:1347674-1347693 None:intergenic 55.0%
CCGTCGTCTGTGGAGATCAT+CGG + chr2_1:1347700-1347719 None:intergenic 55.0%
CCGATGATCTCCACAGACGA+CGG - chr2_1:1347697-1347716 Msa0186620:CDS 55.0%
AACATCGTCACCGTCGTCTG+TGG + chr2_1:1347710-1347729 None:intergenic 55.0%
CGGTGACGATGTTGCAGATC+CGG - chr2_1:1347717-1347736 Msa0186620:CDS 55.0%
TCGTTACCGTCACCGTCAAC+CGG + chr2_1:1347739-1347758 None:intergenic 55.0%
! GTTGACGGTGACGGTAACGA+CGG - chr2_1:1347739-1347758 Msa0186620:CDS 55.0%
! GGTGACGGTAACGACGGAAT+CGG - chr2_1:1347745-1347764 Msa0186620:CDS 55.0%
AGTGTTCACTCGTTTGCCGG+CGG - chr2_1:1347848-1347867 Msa0186620:CDS 55.0%
TGTCGCGAACTTACGGATGC+TGG - chr2_1:1348081-1348100 Msa0186620:CDS 55.0%
TTGTCGGTGAAGCGGCTTAG+GGG - chr2_1:1348219-1348238 Msa0186620:CDS 55.0%
! GGGATGGAAGCTTTGGCACA+TGG - chr2_1:1348879-1348898 Msa0186620:CDS 55.0%
GGCACATGGGTGTCCCAATT+TGG - chr2_1:1348893-1348912 Msa0186620:CDS 55.0%
! AGGGTGTTACACCTGAAGGC+GGG - chr2_1:1348940-1348959 Msa0186620:CDS 55.0%
TTACACCTGAAGGCGGGGAT+TGG - chr2_1:1348946-1348965 Msa0186620:CDS 55.0%
!! GGGATTGGTTGAGGCACACT+AGG - chr2_1:1348961-1348980 Msa0186620:CDS 55.0%
CGCGTCCAGATTCACAGCTA+CGG + chr2_1:1348991-1349010 None:intergenic 55.0%
CGTAGCTGTGAATCTGGACG+CGG - chr2_1:1348989-1349008 Msa0186620:CDS 55.0%
CAAGCAGCTTCCACGGTCAC+CGG - chr2_1:1347607-1347626 Msa0186620:CDS 60.0%
! ACTTTCCCGGCGGTTGGTTC+CGG + chr2_1:1347629-1347648 None:intergenic 60.0%
CATCGGAGAAACCAAGGCGG+TGG + chr2_1:1347683-1347702 None:intergenic 60.0%
GCAGATCCGGTTGACGGTGA+CGG - chr2_1:1347730-1347749 Msa0186620:CDS 60.0%
CTTCAACGTGAAGCCACCGC+CGG + chr2_1:1347867-1347886 None:intergenic 60.0%
TGAAAATTGCGCCGCGCTCG+AGG - chr2_1:1348194-1348213 Msa0186620:CDS 60.0%
CACCGACAATTCCTCGAGCG+CGG + chr2_1:1348208-1348227 None:intergenic 60.0%
GGGAATTGCTGAGACTGCGG+TGG - chr2_1:1348239-1348258 Msa0186620:CDS 60.0%
! GGGTGTTACACCTGAAGGCG+GGG - chr2_1:1348941-1348960 Msa0186620:CDS 60.0%
CTCAACCAATCCCCGCCTTC+AGG + chr2_1:1348954-1348973 None:intergenic 60.0%
!! CTGAAGGCGGGGATTGGTTG+AGG - chr2_1:1348952-1348971 Msa0186620:CDS 60.0%
GGTAGCACTAGTGCCCGTCA+TGG - chr2_1:1349218-1349237 Msa0186620:CDS 60.0%
CAAGCAGCTTCCACGGTCAC+CGG - chr2_1:1347607-1347626 Msa0186620:CDS 60.0%
! ACTTTCCCGGCGGTTGGTTC+CGG + chr2_1:1347629-1347648 None:intergenic 60.0%
CATCGGAGAAACCAAGGCGG+TGG + chr2_1:1347683-1347702 None:intergenic 60.0%
GCAGATCCGGTTGACGGTGA+CGG - chr2_1:1347730-1347749 Msa0186620:CDS 60.0%
CTTCAACGTGAAGCCACCGC+CGG + chr2_1:1347867-1347886 None:intergenic 60.0%
TGAAAATTGCGCCGCGCTCG+AGG - chr2_1:1348194-1348213 Msa0186620:CDS 60.0%
CACCGACAATTCCTCGAGCG+CGG + chr2_1:1348208-1348227 None:intergenic 60.0%
GGGAATTGCTGAGACTGCGG+TGG - chr2_1:1348239-1348258 Msa0186620:CDS 60.0%
! GGGTGTTACACCTGAAGGCG+GGG - chr2_1:1348941-1348960 Msa0186620:CDS 60.0%
CTCAACCAATCCCCGCCTTC+AGG + chr2_1:1348954-1348973 None:intergenic 60.0%
!! CTGAAGGCGGGGATTGGTTG+AGG - chr2_1:1348952-1348971 Msa0186620:CDS 60.0%
GGTAGCACTAGTGCCCGTCA+TGG - chr2_1:1349218-1349237 Msa0186620:CDS 60.0%
CGGTGACCGTGGAAGCTGCT+TGG + chr2_1:1347609-1347628 None:intergenic 65.0%
! ACCAACCGCCGGGAAAGTGC+AGG - chr2_1:1347631-1347650 Msa0186620:CDS 65.0%
GGTTGCCTGCACTTTCCCGG+CGG + chr2_1:1347639-1347658 None:intergenic 65.0%
GTTCACTCGTTTGCCGGCGG+TGG - chr2_1:1347851-1347870 Msa0186620:CDS 65.0%
CGGCGGTGGCTTCACGTTGA+AGG - chr2_1:1347865-1347884 Msa0186620:CDS 65.0%
CCGTAAGTTCGCGACACGCG+CGG + chr2_1:1348077-1348096 None:intergenic 65.0%
CCGCGCGTGTCGCGAACTTA+CGG - chr2_1:1348074-1348093 Msa0186620:CDS 65.0%
CGCCGCGCTCGAGGAATTGT+CGG - chr2_1:1348203-1348222 Msa0186620:CDS 65.0%
ACTGCGGTGGCTGAGCCGAT+TGG - chr2_1:1348252-1348271 Msa0186620:CDS 65.0%
GGTGGCTGAGCCGATTGGAC+CGG - chr2_1:1348257-1348276 Msa0186620:CDS 65.0%
GTGGCTGAGCCGATTGGACC+GGG - chr2_1:1348258-1348277 Msa0186620:CDS 65.0%
TGAGCCGATTGGACCGGGTG+TGG - chr2_1:1348263-1348282 Msa0186620:CDS 65.0%
TCCTTCAATGCCCGGCTCCG+CGG - chr2_1:1349076-1349095 Msa0186620:CDS 65.0%
GATGTAGATGCCGCGGAGCC+GGG + chr2_1:1349089-1349108 None:intergenic 65.0%
CGATGTAGATGCCGCGGAGC+CGG + chr2_1:1349090-1349109 None:intergenic 65.0%
CGGCTCCGCGGCATCTACAT+CGG - chr2_1:1349088-1349107 Msa0186620:CDS 65.0%
GGTTAGGGCTACTGTCCGGG+AGG - chr2_1:1349159-1349178 Msa0186620:CDS 65.0%
CGGTGACCGTGGAAGCTGCT+TGG + chr2_1:1347609-1347628 None:intergenic 65.0%
! ACCAACCGCCGGGAAAGTGC+AGG - chr2_1:1347631-1347650 Msa0186620:CDS 65.0%
GGTTGCCTGCACTTTCCCGG+CGG + chr2_1:1347639-1347658 None:intergenic 65.0%
GTTCACTCGTTTGCCGGCGG+TGG - chr2_1:1347851-1347870 Msa0186620:CDS 65.0%
CGGCGGTGGCTTCACGTTGA+AGG - chr2_1:1347865-1347884 Msa0186620:CDS 65.0%
CCGTAAGTTCGCGACACGCG+CGG + chr2_1:1348077-1348096 None:intergenic 65.0%
CCGCGCGTGTCGCGAACTTA+CGG - chr2_1:1348074-1348093 Msa0186620:CDS 65.0%
CGCCGCGCTCGAGGAATTGT+CGG - chr2_1:1348203-1348222 Msa0186620:CDS 65.0%
ACTGCGGTGGCTGAGCCGAT+TGG - chr2_1:1348252-1348271 Msa0186620:CDS 65.0%
GGTGGCTGAGCCGATTGGAC+CGG - chr2_1:1348257-1348276 Msa0186620:CDS 65.0%
GTGGCTGAGCCGATTGGACC+GGG - chr2_1:1348258-1348277 Msa0186620:CDS 65.0%
TGAGCCGATTGGACCGGGTG+TGG - chr2_1:1348263-1348282 Msa0186620:CDS 65.0%
TCCTTCAATGCCCGGCTCCG+CGG - chr2_1:1349076-1349095 Msa0186620:CDS 65.0%
GATGTAGATGCCGCGGAGCC+GGG + chr2_1:1349089-1349108 None:intergenic 65.0%
CGATGTAGATGCCGCGGAGC+CGG + chr2_1:1349090-1349109 None:intergenic 65.0%
CGGCTCCGCGGCATCTACAT+CGG - chr2_1:1349088-1349107 Msa0186620:CDS 65.0%
GGTTAGGGCTACTGTCCGGG+AGG - chr2_1:1349159-1349178 Msa0186620:CDS 65.0%
! GCGGTTGGTTCCGGTGACCG+TGG + chr2_1:1347620-1347639 None:intergenic 70.0%
CGGTCACCGGAACCAACCGC+CGG - chr2_1:1347620-1347639 Msa0186620:CDS 70.0%
GGTCACCGGAACCAACCGCC+GGG - chr2_1:1347621-1347640 Msa0186620:CDS 70.0%
GCCTGCACTTTCCCGGCGGT+TGG + chr2_1:1347635-1347654 None:intergenic 70.0%
CGCGACACGCGCGGAGCTTA+AGG + chr2_1:1348068-1348087 None:intergenic 70.0%
GCGGCCACACCCGGTCCAAT+CGG + chr2_1:1348270-1348289 None:intergenic 70.0%
AACGACGCAGCGGCCACACC+CGG + chr2_1:1348279-1348298 None:intergenic 70.0%
! GCGGTTGGTTCCGGTGACCG+TGG + chr2_1:1347620-1347639 None:intergenic 70.0%
CGGTCACCGGAACCAACCGC+CGG - chr2_1:1347620-1347639 Msa0186620:CDS 70.0%
GGTCACCGGAACCAACCGCC+GGG - chr2_1:1347621-1347640 Msa0186620:CDS 70.0%
GCCTGCACTTTCCCGGCGGT+TGG + chr2_1:1347635-1347654 None:intergenic 70.0%
CGCGACACGCGCGGAGCTTA+AGG + chr2_1:1348068-1348087 None:intergenic 70.0%
GCGGCCACACCCGGTCCAAT+CGG + chr2_1:1348270-1348289 None:intergenic 70.0%
AACGACGCAGCGGCCACACC+CGG + chr2_1:1348279-1348298 None:intergenic 70.0%
!! GCCGCGGAGCCGGGCATTGA+AGG + chr2_1:1349080-1349099 None:intergenic 75.0%
!! GCCGCGGAGCCGGGCATTGA+AGG + chr2_1:1349080-1349099 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 1347601 1349244 1347601 ID=Msa0186620;Name=Msa0186620
chr2_1 mRNA 1347601 1349244 1347601 ID=Msa0186620-mRNA-1;Parent=Msa0186620;Name=Msa0186620-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|547
chr2_1 exon 1347601 1349244 1347601 ID=Msa0186620-mRNA-1:exon:572;Parent=Msa0186620-mRNA-1
chr2_1 CDS 1347601 1349244 1347601 ID=Msa0186620-mRNA-1:cds;Parent=Msa0186620-mRNA-1
Gene Sequence

>Msa0186620

ATGGGCCAAGCAGCTTCCACGGTCACCGGAACCAACCGCCGGGAAAGTGCAGGCAACCGATCTACCAAAACCAACAGATCCACCGCCTTGGTTTCTCCGATGATCTCCACAGACGACGGTGACGATGTTGCAGATCCGGTTGACGGTGACGGTAACGACGGAATCGGAAACTCCGATTATATATCAGAACTACCTGATGAATGTTTAGCGATTGTGTTTCAGTCGTTGAATCCCTCTGATCGGAATCAGTGTTCACTCGTTTGCCGGCGGTGGCTTCACGTTGAAGGACAGAGTCGTCAACGGCTTTCGTTGAACGCGAAGTTTGATCTTCTTCCGGTAATTCCTTCTCTGTTTAATCGATTTGATTCAGTGACGAAATTAGCGTTGAAGTGTGATCGTAGATCTGCGAGTATTAGAGATGAAGCGCTTGTGATAATCTCTGAGCGTTGTCCTAATCTCACGCGCCTTAAGCTCCGCGCGTGTCGCGAACTTACGGATGCTGGAATGGAAGCTTTTGCTAAGAATTGTAAGGGTTTGAGGAAATTATCGTGTGGATCTTGTACTTTTGGATCTAAAGGTATGAACGCGGTGCTTGAAAATTGCGCCGCGCTCGAGGAATTGTCGGTGAAGCGGCTTAGGGGAATTGCTGAGACTGCGGTGGCTGAGCCGATTGGACCGGGTGTGGCCGCTGCGTCGTTGAAGACGATTTGTTTGAAGGAACTTTATAATGGACAGTGTTTTGGTTCGTTGATTTTAGGTGCTAAGAATTTGAAGACTTTGAAGCTATTTCGATGTTCCGGTGATTGGGATACGCTTTTTACACTTATGGCTGAAAGAGTGTCGAGTATGATTGTTGAGGTTCATTTTGAGAGGCTTCAGATTAGTGATATTGGATTGCAAGCTATTTCGAATTGTTCGAATTTGGAGATTTTGCATCTTGTTAAGACACCTGAGTGTACTGATATGGGACTTGTTGCGATTGCTGAAAGATGTAAGTTGTTAAGGAAGCTACATATTGATGGATGGAAGGCAAATCGGATTGGCGATGAAGGGTTAATTGCGGTTGCAAAGTTTTGCCCTAATTTGCAAGAATTGGTGCTTATTGGTGTTAACCCAACGAGAGTGAGTTTGGAAATGTTGGCATCGAATTGCCCGAATCTAGAGAGATTGGCTTTGTGTGCAAGTGATACTGTTGGTGATCCTGAGATATCTTGCATTGCTGCAAAGTGTTTGGCTTTGAAGAAACTTTGCATCAAGAGTTGTCCTGTTTCTGATCTTGGGATGGAAGCTTTGGCACATGGGTGTCCCAATTTGGTGAAAGTGAAGGTCAAGAAGTGTAAGGGTGTTACACCTGAAGGCGGGGATTGGTTGAGGCACACTAGGGTTTCCGTAGCTGTGAATCTGGACGCGGTTGAAGCAGAACTTCAAGATGCTAGTGCTAGTGATGGTGGAGCACAAGAGAATGGGATTGAATTTCCTTCAATGCCCGGCTCCGCGGCATCTACATCGGCAAATATTGCATCGAGAAGTACTGTTCGATCGAGTTCATTCAAGCAAAGGTTAGGGCTACTGTCCGGGAGGAAAATTGTGGCTAGCACTTTGAGAAGATGGTCAGGTGGTAGCACTAGTGCCCGTCATGGTTAG

Protein sequence

>Msa0186620

MGQAASTVTGTNRRESAGNRSTKTNRSTALVSPMISTDDGDDVADPVDGDGNDGIGNSDYISELPDECLAIVFQSLNPSDRNQCSLVCRRWLHVEGQSRQRLSLNAKFDLLPVIPSLFNRFDSVTKLALKCDRRSASIRDEALVIISERCPNLTRLKLRACRELTDAGMEAFAKNCKGLRKLSCGSCTFGSKGMNAVLENCAALEELSVKRLRGIAETAVAEPIGPGVAAASLKTICLKELYNGQCFGSLILGAKNLKTLKLFRCSGDWDTLFTLMAERVSSMIVEVHFERLQISDIGLQAISNCSNLEILHLVKTPECTDMGLVAIAERCKLLRKLHIDGWKANRIGDEGLIAVAKFCPNLQELVLIGVNPTRVSLEMLASNCPNLERLALCASDTVGDPEISCIAAKCLALKKLCIKSCPVSDLGMEALAHGCPNLVKVKVKKCKGVTPEGGDWLRHTRVSVAVNLDAVEAELQDASASDGGAQENGIEFPSMPGSAASTSANIASRSTVRSSSFKQRLGLLSGRKIVASTLRRWSGGSTSARHG*